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authorAndrej Shadura <andrewsh@debian.org>2019-03-09 22:30:29 +0000
committerAndrej Shadura <andrewsh@debian.org>2019-03-09 22:30:29 +0000
commit6160961591bfbfeab2ea5f7c249f58c78e893347 (patch)
treeae6898c52d4f697964996fb00e23e7f784ce1b47
parentcde76aeb42240f7270bc6605c606ae07d2dc5a7d (diff)
Import Upstream version 0.4.0~beta2
-rw-r--r--src/de/lmu/ifi/dbs/elki/KDDTask.java48
-rw-r--r--src/de/lmu/ifi/dbs/elki/algorithm/APRIORI.java35
-rw-r--r--src/de/lmu/ifi/dbs/elki/algorithm/AbstractAlgorithm.java35
-rw-r--r--src/de/lmu/ifi/dbs/elki/algorithm/AbstractDistanceBasedAlgorithm.java35
-rw-r--r--src/de/lmu/ifi/dbs/elki/algorithm/AbstractPrimitiveDistanceBasedAlgorithm.java35
-rw-r--r--src/de/lmu/ifi/dbs/elki/algorithm/Algorithm.java35
-rw-r--r--src/de/lmu/ifi/dbs/elki/algorithm/DependencyDerivator.java43
-rw-r--r--src/de/lmu/ifi/dbs/elki/algorithm/DummyAlgorithm.java35
-rw-r--r--src/de/lmu/ifi/dbs/elki/algorithm/KNNDistanceOrder.java43
-rw-r--r--src/de/lmu/ifi/dbs/elki/algorithm/KNNJoin.java35
-rw-r--r--src/de/lmu/ifi/dbs/elki/algorithm/MaterializeDistances.java35
-rw-r--r--src/de/lmu/ifi/dbs/elki/algorithm/NullAlgorithm.java37
-rw-r--r--src/de/lmu/ifi/dbs/elki/algorithm/clustering/AbstractProjectedClustering.java43
-rw-r--r--src/de/lmu/ifi/dbs/elki/algorithm/clustering/AbstractProjectedDBSCAN.java43
-rw-r--r--src/de/lmu/ifi/dbs/elki/algorithm/clustering/ClusteringAlgorithm.java35
-rw-r--r--src/de/lmu/ifi/dbs/elki/algorithm/clustering/DBSCAN.java43
-rw-r--r--src/de/lmu/ifi/dbs/elki/algorithm/clustering/DeLiClu.java43
-rw-r--r--src/de/lmu/ifi/dbs/elki/algorithm/clustering/EM.java43
-rw-r--r--src/de/lmu/ifi/dbs/elki/algorithm/clustering/KMeans.java35
-rw-r--r--src/de/lmu/ifi/dbs/elki/algorithm/clustering/OPTICS.java43
-rw-r--r--src/de/lmu/ifi/dbs/elki/algorithm/clustering/OPTICSTypeAlgorithm.java43
-rw-r--r--src/de/lmu/ifi/dbs/elki/algorithm/clustering/OPTICSXi.java43
-rw-r--r--src/de/lmu/ifi/dbs/elki/algorithm/clustering/SLINK.java43
-rw-r--r--src/de/lmu/ifi/dbs/elki/algorithm/clustering/SNNClustering.java66
-rw-r--r--src/de/lmu/ifi/dbs/elki/algorithm/clustering/correlation/CASH.java43
-rw-r--r--src/de/lmu/ifi/dbs/elki/algorithm/clustering/correlation/COPAC.java43
-rw-r--r--src/de/lmu/ifi/dbs/elki/algorithm/clustering/correlation/ERiC.java43
-rw-r--r--src/de/lmu/ifi/dbs/elki/algorithm/clustering/correlation/FourC.java35
-rw-r--r--src/de/lmu/ifi/dbs/elki/algorithm/clustering/correlation/ORCLUS.java43
-rw-r--r--src/de/lmu/ifi/dbs/elki/algorithm/clustering/correlation/cash/CASHInterval.java43
-rw-r--r--src/de/lmu/ifi/dbs/elki/algorithm/clustering/correlation/cash/CASHIntervalSplit.java43
-rw-r--r--src/de/lmu/ifi/dbs/elki/algorithm/clustering/subspace/CLIQUE.java43
-rw-r--r--src/de/lmu/ifi/dbs/elki/algorithm/clustering/subspace/DiSH.java43
-rw-r--r--src/de/lmu/ifi/dbs/elki/algorithm/clustering/subspace/PROCLUS.java43
-rw-r--r--src/de/lmu/ifi/dbs/elki/algorithm/clustering/subspace/PreDeCon.java35
-rw-r--r--src/de/lmu/ifi/dbs/elki/algorithm/clustering/subspace/SUBCLU.java43
-rw-r--r--src/de/lmu/ifi/dbs/elki/algorithm/clustering/subspace/clique/CLIQUESubspace.java35
-rw-r--r--src/de/lmu/ifi/dbs/elki/algorithm/clustering/subspace/clique/CLIQUEUnit.java43
-rw-r--r--src/de/lmu/ifi/dbs/elki/algorithm/clustering/trivial/ByLabelClustering.java48
-rw-r--r--src/de/lmu/ifi/dbs/elki/algorithm/clustering/trivial/ByLabelHierarchicalClustering.java54
-rw-r--r--src/de/lmu/ifi/dbs/elki/algorithm/clustering/trivial/TrivialAllInOne.java35
-rw-r--r--src/de/lmu/ifi/dbs/elki/algorithm/clustering/trivial/TrivialAllNoise.java35
-rw-r--r--src/de/lmu/ifi/dbs/elki/algorithm/outlier/ABOD.java45
-rw-r--r--src/de/lmu/ifi/dbs/elki/algorithm/outlier/AbstractAggarwalYuOutlier.java43
-rw-r--r--src/de/lmu/ifi/dbs/elki/algorithm/outlier/LOCI.java35
-rw-r--r--src/de/lmu/ifi/dbs/elki/algorithm/outlier/LOF.java43
-rw-r--r--src/de/lmu/ifi/dbs/elki/algorithm/outlier/LoOP.java43
-rw-r--r--src/de/lmu/ifi/dbs/elki/algorithm/outlier/OutlierAlgorithm.java35
-rw-r--r--src/de/lmu/ifi/dbs/elki/algorithm/outlier/SOD.java65
-rw-r--r--src/de/lmu/ifi/dbs/elki/algorithm/outlier/meta/ExternalDoubleOutlierScore.java43
-rw-r--r--src/de/lmu/ifi/dbs/elki/algorithm/outlier/meta/FeatureBagging.java35
-rw-r--r--src/de/lmu/ifi/dbs/elki/algorithm/outlier/meta/RescaleMetaOutlierAlgorithm.java43
-rw-r--r--src/de/lmu/ifi/dbs/elki/algorithm/outlier/spatial/AbstractDistanceBasedSpatialOutlier.java35
-rw-r--r--src/de/lmu/ifi/dbs/elki/algorithm/outlier/spatial/AbstractNeighborhoodOutlier.java35
-rw-r--r--src/de/lmu/ifi/dbs/elki/algorithm/outlier/spatial/CTLuGLSBackwardSearchAlgorithm.java43
-rw-r--r--src/de/lmu/ifi/dbs/elki/algorithm/outlier/spatial/CTLuMeanMultipleAttributes.java39
-rw-r--r--src/de/lmu/ifi/dbs/elki/algorithm/outlier/spatial/CTLuMedianAlgorithm.java4
-rw-r--r--src/de/lmu/ifi/dbs/elki/algorithm/outlier/spatial/CTLuMedianMultipleAttributes.java39
-rw-r--r--src/de/lmu/ifi/dbs/elki/algorithm/outlier/spatial/CTLuMoranScatterplotOutlier.java47
-rw-r--r--src/de/lmu/ifi/dbs/elki/algorithm/outlier/spatial/CTLuScatterplotOutlier.java39
-rw-r--r--src/de/lmu/ifi/dbs/elki/algorithm/outlier/spatial/CTLuZTestOutlier.java39
-rw-r--r--src/de/lmu/ifi/dbs/elki/algorithm/outlier/spatial/SLOM.java47
-rw-r--r--src/de/lmu/ifi/dbs/elki/algorithm/outlier/spatial/SOF.java5
-rw-r--r--src/de/lmu/ifi/dbs/elki/algorithm/outlier/spatial/TrimmedMeanApproach.java4
-rw-r--r--src/de/lmu/ifi/dbs/elki/algorithm/outlier/spatial/neighborhood/AbstractPrecomputedNeighborhood.java35
-rw-r--r--src/de/lmu/ifi/dbs/elki/algorithm/outlier/spatial/neighborhood/ExtendedNeighborhood.java58
-rw-r--r--src/de/lmu/ifi/dbs/elki/algorithm/outlier/spatial/neighborhood/ExternalNeighborhood.java58
-rw-r--r--src/de/lmu/ifi/dbs/elki/algorithm/outlier/spatial/neighborhood/NeighborSetPredicate.java40
-rw-r--r--src/de/lmu/ifi/dbs/elki/algorithm/outlier/spatial/neighborhood/PrecomputedKNearestNeighborNeighborhood.java3
-rw-r--r--src/de/lmu/ifi/dbs/elki/algorithm/outlier/spatial/neighborhood/weighted/LinearWeightedExtendedNeighborhood.java43
-rw-r--r--src/de/lmu/ifi/dbs/elki/algorithm/outlier/spatial/neighborhood/weighted/UnweightedNeighborhoodAdapter.java43
-rw-r--r--src/de/lmu/ifi/dbs/elki/algorithm/outlier/spatial/neighborhood/weighted/WeightedNeighborSetPredicate.java35
-rw-r--r--src/de/lmu/ifi/dbs/elki/algorithm/outlier/trivial/ByLabelOutlier.java65
-rw-r--r--src/de/lmu/ifi/dbs/elki/algorithm/outlier/trivial/TrivialAllOutlier.java46
-rw-r--r--src/de/lmu/ifi/dbs/elki/algorithm/outlier/trivial/TrivialNoOutlier.java46
-rw-r--r--src/de/lmu/ifi/dbs/elki/algorithm/statistics/DistanceStatisticsWithClasses.java43
-rw-r--r--src/de/lmu/ifi/dbs/elki/algorithm/statistics/EvaluateRankingQuality.java43
-rw-r--r--src/de/lmu/ifi/dbs/elki/algorithm/statistics/RankingQualityHistogram.java43
-rw-r--r--src/de/lmu/ifi/dbs/elki/application/AbstractApplication.java43
-rw-r--r--src/de/lmu/ifi/dbs/elki/application/ComputeSingleColorHistogram.java43
-rw-r--r--src/de/lmu/ifi/dbs/elki/application/GeneratorXMLSpec.java43
-rw-r--r--src/de/lmu/ifi/dbs/elki/application/KDDCLIApplication.java35
-rw-r--r--src/de/lmu/ifi/dbs/elki/application/cache/CacheDoubleDistanceInOnDiskMatrix.java43
-rw-r--r--src/de/lmu/ifi/dbs/elki/application/cache/CacheFloatDistanceInOnDiskMatrix.java43
-rw-r--r--src/de/lmu/ifi/dbs/elki/application/internal/CheckELKIProperties.java35
-rw-r--r--src/de/lmu/ifi/dbs/elki/application/internal/CheckParameterizables.java35
-rw-r--r--src/de/lmu/ifi/dbs/elki/application/internal/DocumentParameters.java43
-rw-r--r--src/de/lmu/ifi/dbs/elki/application/internal/DocumentReferences.java35
-rw-r--r--src/de/lmu/ifi/dbs/elki/application/jsmap/JSONBuffer.java43
-rw-r--r--src/de/lmu/ifi/dbs/elki/application/jsmap/JSONResultHandler.java2
-rw-r--r--src/de/lmu/ifi/dbs/elki/application/visualization/KNNExplorer.java59
-rw-r--r--src/de/lmu/ifi/dbs/elki/data/AbstractNumberVector.java40
-rw-r--r--src/de/lmu/ifi/dbs/elki/data/Arithmetic.java35
-rw-r--r--src/de/lmu/ifi/dbs/elki/data/Bit.java43
-rw-r--r--src/de/lmu/ifi/dbs/elki/data/BitVector.java43
-rw-r--r--src/de/lmu/ifi/dbs/elki/data/ClassLabel.java35
-rw-r--r--src/de/lmu/ifi/dbs/elki/data/Cluster.java43
-rw-r--r--src/de/lmu/ifi/dbs/elki/data/Clustering.java35
-rw-r--r--src/de/lmu/ifi/dbs/elki/data/DoubleVector.java43
-rw-r--r--src/de/lmu/ifi/dbs/elki/data/ExternalID.java36
-rw-r--r--src/de/lmu/ifi/dbs/elki/data/FeatureVector.java35
-rw-r--r--src/de/lmu/ifi/dbs/elki/data/FloatVector.java43
-rw-r--r--src/de/lmu/ifi/dbs/elki/data/HierarchicalClassLabel.java43
-rw-r--r--src/de/lmu/ifi/dbs/elki/data/HyperBoundingBox.java43
-rw-r--r--src/de/lmu/ifi/dbs/elki/data/IntegerVector.java43
-rw-r--r--src/de/lmu/ifi/dbs/elki/data/Interval.java43
-rw-r--r--src/de/lmu/ifi/dbs/elki/data/LabelList.java43
-rw-r--r--src/de/lmu/ifi/dbs/elki/data/ModifiableHyperBoundingBox.java35
-rw-r--r--src/de/lmu/ifi/dbs/elki/data/NumberVector.java43
-rw-r--r--src/de/lmu/ifi/dbs/elki/data/OneDimensionalDoubleVector.java43
-rw-r--r--src/de/lmu/ifi/dbs/elki/data/ParameterizationFunction.java43
-rw-r--r--src/de/lmu/ifi/dbs/elki/data/RationalNumber.java52
-rw-r--r--src/de/lmu/ifi/dbs/elki/data/SimpleClassLabel.java36
-rw-r--r--src/de/lmu/ifi/dbs/elki/data/SparseFeatureVector.java35
-rw-r--r--src/de/lmu/ifi/dbs/elki/data/SparseFloatVector.java43
-rw-r--r--src/de/lmu/ifi/dbs/elki/data/SparseNumberVector.java44
-rw-r--r--src/de/lmu/ifi/dbs/elki/data/Subspace.java43
-rw-r--r--src/de/lmu/ifi/dbs/elki/data/VectorUtil.java35
-rw-r--r--src/de/lmu/ifi/dbs/elki/data/images/AbstractComputeColorHistogram.java35
-rw-r--r--src/de/lmu/ifi/dbs/elki/data/images/BlendComposite.java49
-rw-r--r--src/de/lmu/ifi/dbs/elki/data/images/ComputeColorHistogram.java43
-rw-r--r--src/de/lmu/ifi/dbs/elki/data/images/ComputeHSBColorHistogram.java43
-rw-r--r--src/de/lmu/ifi/dbs/elki/data/images/ComputeNaiveHSBColorHistogram.java35
-rw-r--r--src/de/lmu/ifi/dbs/elki/data/images/ComputeNaiveRGBColorHistogram.java35
-rw-r--r--src/de/lmu/ifi/dbs/elki/data/images/ImageUtil.java43
-rw-r--r--src/de/lmu/ifi/dbs/elki/data/model/BaseModel.java35
-rw-r--r--src/de/lmu/ifi/dbs/elki/data/model/Bicluster.java43
-rw-r--r--src/de/lmu/ifi/dbs/elki/data/model/BiclusterWithInverted.java36
-rw-r--r--src/de/lmu/ifi/dbs/elki/data/model/ClusterModel.java44
-rw-r--r--src/de/lmu/ifi/dbs/elki/data/model/CorrelationAnalysisSolution.java43
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-rw-r--r--src/de/lmu/ifi/dbs/elki/data/model/DimensionModel.java35
-rw-r--r--src/de/lmu/ifi/dbs/elki/data/model/EMModel.java35
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-rw-r--r--src/de/lmu/ifi/dbs/elki/data/spatial/Polygon.java35
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-rw-r--r--src/de/lmu/ifi/dbs/elki/data/synthetic/bymodel/GeneratorInterface.java35
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-rw-r--r--test/de/lmu/ifi/dbs/elki/math/TestFlexiHistogram.java23
-rw-r--r--test/de/lmu/ifi/dbs/elki/math/TestKernelDensityFitting.java23
-rw-r--r--test/de/lmu/ifi/dbs/elki/math/TestLevenbergMarquardtGaussianFitting.java23
-rw-r--r--test/de/lmu/ifi/dbs/elki/math/TestMatrix.java25
-rw-r--r--test/de/lmu/ifi/dbs/elki/math/TestQuickSelect.java24
-rw-r--r--test/de/lmu/ifi/dbs/elki/math/TestReplacingHistogram.java30
-rw-r--r--test/de/lmu/ifi/dbs/elki/math/TestWeightFunctions.java62
-rw-r--r--test/de/lmu/ifi/dbs/elki/persistent/TestByteArrayUtil.java23
-rw-r--r--test/de/lmu/ifi/dbs/elki/persistent/TestOnDiskArray.java23
-rw-r--r--test/de/lmu/ifi/dbs/elki/persistent/TestOnDiskUpperTriangleMatrix.java45
-rw-r--r--test/de/lmu/ifi/dbs/elki/utilities/datastructures/TestHeap.java27
-rw-r--r--test/de/lmu/ifi/dbs/elki/utilities/datastructures/TestTiedTopBoundedHeap.java30
-rw-r--r--test/de/lmu/ifi/dbs/elki/utilities/datastructures/TestTopBoundedHeap.java27
-rw-r--r--test/de/lmu/ifi/dbs/elki/visualization/TestLinearScale.java35
1076 files changed, 25492 insertions, 21029 deletions
diff --git a/src/de/lmu/ifi/dbs/elki/KDDTask.java b/src/de/lmu/ifi/dbs/elki/KDDTask.java
index 4c46d0a9..33c5b29d 100644
--- a/src/de/lmu/ifi/dbs/elki/KDDTask.java
+++ b/src/de/lmu/ifi/dbs/elki/KDDTask.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki;
-/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.Collection;
@@ -44,8 +45,7 @@ import de.lmu.ifi.dbs.elki.workflow.OutputStep;
/**
* Provides a KDDTask that can be used to perform any algorithm implementing
* {@link Algorithm Algorithm} using any DatabaseConnection implementing
- * {@link de.lmu.ifi.dbs.elki.datasource.DatabaseConnection
- * DatabaseConnection}.
+ * {@link de.lmu.ifi.dbs.elki.datasource.DatabaseConnection DatabaseConnection}.
*
* @author Arthur Zimek
*
@@ -87,7 +87,7 @@ public class KDDTask implements Parameterizable {
/**
* Constructor.
- *
+ *
* @param inputStep
* @param algorithmStep
* @param evaluationStep
diff --git a/src/de/lmu/ifi/dbs/elki/algorithm/APRIORI.java b/src/de/lmu/ifi/dbs/elki/algorithm/APRIORI.java
index 326e3167..5cfb7073 100644
--- a/src/de/lmu/ifi/dbs/elki/algorithm/APRIORI.java
+++ b/src/de/lmu/ifi/dbs/elki/algorithm/APRIORI.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.algorithm;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.ArrayList;
import java.util.Arrays;
diff --git a/src/de/lmu/ifi/dbs/elki/algorithm/AbstractAlgorithm.java b/src/de/lmu/ifi/dbs/elki/algorithm/AbstractAlgorithm.java
index 45e88d19..61a695eb 100644
--- a/src/de/lmu/ifi/dbs/elki/algorithm/AbstractAlgorithm.java
+++ b/src/de/lmu/ifi/dbs/elki/algorithm/AbstractAlgorithm.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.algorithm;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.lang.reflect.InvocationTargetException;
import java.lang.reflect.Method;
diff --git a/src/de/lmu/ifi/dbs/elki/algorithm/AbstractDistanceBasedAlgorithm.java b/src/de/lmu/ifi/dbs/elki/algorithm/AbstractDistanceBasedAlgorithm.java
index 9f544584..394ea55b 100644
--- a/src/de/lmu/ifi/dbs/elki/algorithm/AbstractDistanceBasedAlgorithm.java
+++ b/src/de/lmu/ifi/dbs/elki/algorithm/AbstractDistanceBasedAlgorithm.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.algorithm;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.distance.distancefunction.DistanceFunction;
import de.lmu.ifi.dbs.elki.distance.distancefunction.EuclideanDistanceFunction;
diff --git a/src/de/lmu/ifi/dbs/elki/algorithm/AbstractPrimitiveDistanceBasedAlgorithm.java b/src/de/lmu/ifi/dbs/elki/algorithm/AbstractPrimitiveDistanceBasedAlgorithm.java
index 82539bd0..ad49563a 100644
--- a/src/de/lmu/ifi/dbs/elki/algorithm/AbstractPrimitiveDistanceBasedAlgorithm.java
+++ b/src/de/lmu/ifi/dbs/elki/algorithm/AbstractPrimitiveDistanceBasedAlgorithm.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.algorithm;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.distance.distancefunction.EuclideanDistanceFunction;
import de.lmu.ifi.dbs.elki.distance.distancefunction.PrimitiveDistanceFunction;
diff --git a/src/de/lmu/ifi/dbs/elki/algorithm/Algorithm.java b/src/de/lmu/ifi/dbs/elki/algorithm/Algorithm.java
index 8f1acf41..40f24914 100644
--- a/src/de/lmu/ifi/dbs/elki/algorithm/Algorithm.java
+++ b/src/de/lmu/ifi/dbs/elki/algorithm/Algorithm.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.algorithm;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.data.type.TypeInformation;
import de.lmu.ifi.dbs.elki.database.Database;
diff --git a/src/de/lmu/ifi/dbs/elki/algorithm/DependencyDerivator.java b/src/de/lmu/ifi/dbs/elki/algorithm/DependencyDerivator.java
index 03592077..86fc3e51 100644
--- a/src/de/lmu/ifi/dbs/elki/algorithm/DependencyDerivator.java
+++ b/src/de/lmu/ifi/dbs/elki/algorithm/DependencyDerivator.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.algorithm;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.text.NumberFormat;
import java.util.List;
diff --git a/src/de/lmu/ifi/dbs/elki/algorithm/DummyAlgorithm.java b/src/de/lmu/ifi/dbs/elki/algorithm/DummyAlgorithm.java
index 83ddc66e..d864f18c 100644
--- a/src/de/lmu/ifi/dbs/elki/algorithm/DummyAlgorithm.java
+++ b/src/de/lmu/ifi/dbs/elki/algorithm/DummyAlgorithm.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.algorithm;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.data.NumberVector;
import de.lmu.ifi.dbs.elki.data.type.TypeInformation;
diff --git a/src/de/lmu/ifi/dbs/elki/algorithm/KNNDistanceOrder.java b/src/de/lmu/ifi/dbs/elki/algorithm/KNNDistanceOrder.java
index 8f0ec441..35065973 100644
--- a/src/de/lmu/ifi/dbs/elki/algorithm/KNNDistanceOrder.java
+++ b/src/de/lmu/ifi/dbs/elki/algorithm/KNNDistanceOrder.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.algorithm;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.ArrayList;
import java.util.Collections;
diff --git a/src/de/lmu/ifi/dbs/elki/algorithm/KNNJoin.java b/src/de/lmu/ifi/dbs/elki/algorithm/KNNJoin.java
index 75c44334..6dac350d 100644
--- a/src/de/lmu/ifi/dbs/elki/algorithm/KNNJoin.java
+++ b/src/de/lmu/ifi/dbs/elki/algorithm/KNNJoin.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.algorithm;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.ArrayList;
import java.util.Collection;
diff --git a/src/de/lmu/ifi/dbs/elki/algorithm/MaterializeDistances.java b/src/de/lmu/ifi/dbs/elki/algorithm/MaterializeDistances.java
index 5a6baf4e..345fda1a 100644
--- a/src/de/lmu/ifi/dbs/elki/algorithm/MaterializeDistances.java
+++ b/src/de/lmu/ifi/dbs/elki/algorithm/MaterializeDistances.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.algorithm;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.ArrayList;
import java.util.Collection;
diff --git a/src/de/lmu/ifi/dbs/elki/algorithm/NullAlgorithm.java b/src/de/lmu/ifi/dbs/elki/algorithm/NullAlgorithm.java
index f740ac06..6c13e68e 100644
--- a/src/de/lmu/ifi/dbs/elki/algorithm/NullAlgorithm.java
+++ b/src/de/lmu/ifi/dbs/elki/algorithm/NullAlgorithm.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.algorithm;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.data.type.TypeInformation;
import de.lmu.ifi.dbs.elki.data.type.TypeUtil;
@@ -52,7 +53,7 @@ public class NullAlgorithm extends AbstractAlgorithm<Result> {
}
@Override
- public Result run(@SuppressWarnings("unused") Database database) throws IllegalStateException {
+ public Result run(Database database) throws IllegalStateException {
return null;
}
diff --git a/src/de/lmu/ifi/dbs/elki/algorithm/clustering/AbstractProjectedClustering.java b/src/de/lmu/ifi/dbs/elki/algorithm/clustering/AbstractProjectedClustering.java
index 03f9a166..5712d814 100644
--- a/src/de/lmu/ifi/dbs/elki/algorithm/clustering/AbstractProjectedClustering.java
+++ b/src/de/lmu/ifi/dbs/elki/algorithm/clustering/AbstractProjectedClustering.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.algorithm.clustering;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.algorithm.AbstractAlgorithm;
import de.lmu.ifi.dbs.elki.algorithm.clustering.subspace.PROCLUS;
diff --git a/src/de/lmu/ifi/dbs/elki/algorithm/clustering/AbstractProjectedDBSCAN.java b/src/de/lmu/ifi/dbs/elki/algorithm/clustering/AbstractProjectedDBSCAN.java
index bf138d55..95d88b93 100644
--- a/src/de/lmu/ifi/dbs/elki/algorithm/clustering/AbstractProjectedDBSCAN.java
+++ b/src/de/lmu/ifi/dbs/elki/algorithm/clustering/AbstractProjectedDBSCAN.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.algorithm.clustering;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.ArrayList;
import java.util.Iterator;
diff --git a/src/de/lmu/ifi/dbs/elki/algorithm/clustering/ClusteringAlgorithm.java b/src/de/lmu/ifi/dbs/elki/algorithm/clustering/ClusteringAlgorithm.java
index deac96ed..2f05e44b 100644
--- a/src/de/lmu/ifi/dbs/elki/algorithm/clustering/ClusteringAlgorithm.java
+++ b/src/de/lmu/ifi/dbs/elki/algorithm/clustering/ClusteringAlgorithm.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.algorithm.clustering;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.algorithm.Algorithm;
import de.lmu.ifi.dbs.elki.data.Clustering;
diff --git a/src/de/lmu/ifi/dbs/elki/algorithm/clustering/DBSCAN.java b/src/de/lmu/ifi/dbs/elki/algorithm/clustering/DBSCAN.java
index d9aaefa3..2576c5f6 100644
--- a/src/de/lmu/ifi/dbs/elki/algorithm/clustering/DBSCAN.java
+++ b/src/de/lmu/ifi/dbs/elki/algorithm/clustering/DBSCAN.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.algorithm.clustering;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.ArrayList;
import java.util.List;
diff --git a/src/de/lmu/ifi/dbs/elki/algorithm/clustering/DeLiClu.java b/src/de/lmu/ifi/dbs/elki/algorithm/clustering/DeLiClu.java
index d034c489..d4d6d20a 100644
--- a/src/de/lmu/ifi/dbs/elki/algorithm/clustering/DeLiClu.java
+++ b/src/de/lmu/ifi/dbs/elki/algorithm/clustering/DeLiClu.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.algorithm.clustering;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.Collection;
import java.util.Iterator;
diff --git a/src/de/lmu/ifi/dbs/elki/algorithm/clustering/EM.java b/src/de/lmu/ifi/dbs/elki/algorithm/clustering/EM.java
index 6384dee6..c1285659 100644
--- a/src/de/lmu/ifi/dbs/elki/algorithm/clustering/EM.java
+++ b/src/de/lmu/ifi/dbs/elki/algorithm/clustering/EM.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.algorithm.clustering;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.ArrayList;
import java.util.List;
diff --git a/src/de/lmu/ifi/dbs/elki/algorithm/clustering/KMeans.java b/src/de/lmu/ifi/dbs/elki/algorithm/clustering/KMeans.java
index 800e12a4..38ea89c2 100644
--- a/src/de/lmu/ifi/dbs/elki/algorithm/clustering/KMeans.java
+++ b/src/de/lmu/ifi/dbs/elki/algorithm/clustering/KMeans.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.algorithm.clustering;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.ArrayList;
import java.util.Collections;
diff --git a/src/de/lmu/ifi/dbs/elki/algorithm/clustering/OPTICS.java b/src/de/lmu/ifi/dbs/elki/algorithm/clustering/OPTICS.java
index 807886a1..24985e24 100644
--- a/src/de/lmu/ifi/dbs/elki/algorithm/clustering/OPTICS.java
+++ b/src/de/lmu/ifi/dbs/elki/algorithm/clustering/OPTICS.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.algorithm.clustering;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.List;
diff --git a/src/de/lmu/ifi/dbs/elki/algorithm/clustering/OPTICSTypeAlgorithm.java b/src/de/lmu/ifi/dbs/elki/algorithm/clustering/OPTICSTypeAlgorithm.java
index d701d01c..e8b113d7 100644
--- a/src/de/lmu/ifi/dbs/elki/algorithm/clustering/OPTICSTypeAlgorithm.java
+++ b/src/de/lmu/ifi/dbs/elki/algorithm/clustering/OPTICSTypeAlgorithm.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.algorithm.clustering;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.algorithm.Algorithm;
import de.lmu.ifi.dbs.elki.database.Database;
diff --git a/src/de/lmu/ifi/dbs/elki/algorithm/clustering/OPTICSXi.java b/src/de/lmu/ifi/dbs/elki/algorithm/clustering/OPTICSXi.java
index 9c2e9284..f7bd10c7 100644
--- a/src/de/lmu/ifi/dbs/elki/algorithm/clustering/OPTICSXi.java
+++ b/src/de/lmu/ifi/dbs/elki/algorithm/clustering/OPTICSXi.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.algorithm.clustering;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.ArrayList;
import java.util.Collection;
diff --git a/src/de/lmu/ifi/dbs/elki/algorithm/clustering/SLINK.java b/src/de/lmu/ifi/dbs/elki/algorithm/clustering/SLINK.java
index 429d9491..e1329888 100644
--- a/src/de/lmu/ifi/dbs/elki/algorithm/clustering/SLINK.java
+++ b/src/de/lmu/ifi/dbs/elki/algorithm/clustering/SLINK.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.algorithm.clustering;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.ArrayList;
import java.util.Collections;
diff --git a/src/de/lmu/ifi/dbs/elki/algorithm/clustering/SNNClustering.java b/src/de/lmu/ifi/dbs/elki/algorithm/clustering/SNNClustering.java
index 3bdb224e..3bde2932 100644
--- a/src/de/lmu/ifi/dbs/elki/algorithm/clustering/SNNClustering.java
+++ b/src/de/lmu/ifi/dbs/elki/algorithm/clustering/SNNClustering.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.algorithm.clustering;
-/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.ArrayList;
import java.util.Iterator;
@@ -40,7 +41,6 @@ import de.lmu.ifi.dbs.elki.database.ids.DBIDUtil;
import de.lmu.ifi.dbs.elki.database.ids.ModifiableDBIDs;
import de.lmu.ifi.dbs.elki.database.query.similarity.SimilarityQuery;
import de.lmu.ifi.dbs.elki.database.relation.Relation;
-import de.lmu.ifi.dbs.elki.distance.distancevalue.Distance;
import de.lmu.ifi.dbs.elki.distance.distancevalue.IntegerDistance;
import de.lmu.ifi.dbs.elki.distance.similarityfunction.SharedNearestNeighborSimilarityFunction;
import de.lmu.ifi.dbs.elki.logging.Logging;
@@ -71,14 +71,12 @@ import de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters.IntParameter;
*
* @apiviz.uses SharedNearestNeighborSimilarityFunction
*
- * @param <O> the type of DatabaseObject the algorithm is applied on
- * @param <D> the type of Distance used for the preprocessing of the shared
- * nearest neighbors neighborhood lists
+ * @param <O> the type of Object the algorithm is applied on
*/
@Title("SNN: Shared Nearest Neighbor Clustering")
@Description("Algorithm to find shared-nearest-neighbors-density-connected sets in a database based on the " + "parameters 'minPts' and 'epsilon' (specifying a volume). " + "These two parameters determine a density threshold for clustering.")
@Reference(authors = "L. Ertöz, M. Steinbach, V. Kumar", title = "Finding Clusters of Different Sizes, Shapes, and Densities in Noisy, High Dimensional Data", booktitle = "Proc. of SIAM Data Mining (SDM), 2003", url = "http://www.siam.org/meetings/sdm03/proceedings/sdm03_05.pdf")
-public class SNNClustering<O, D extends Distance<D>> extends AbstractAlgorithm<Clustering<Model>> implements ClusteringAlgorithm<Clustering<Model>> {
+public class SNNClustering<O> extends AbstractAlgorithm<Clustering<Model>> implements ClusteringAlgorithm<Clustering<Model>> {
/**
* The logger for this class.
*/
@@ -124,7 +122,7 @@ public class SNNClustering<O, D extends Distance<D>> extends AbstractAlgorithm<C
/**
* The similarity function for the shared nearest neighbor similarity.
*/
- private SharedNearestNeighborSimilarityFunction<O, D> similarityFunction;
+ private SharedNearestNeighborSimilarityFunction<O> similarityFunction;
/**
* Constructor.
@@ -133,7 +131,7 @@ public class SNNClustering<O, D extends Distance<D>> extends AbstractAlgorithm<C
* @param epsilon Epsilon
* @param minpts Minpts
*/
- public SNNClustering(SharedNearestNeighborSimilarityFunction<O, D> similarityFunction, IntegerDistance epsilon, int minpts) {
+ public SNNClustering(SharedNearestNeighborSimilarityFunction<O> similarityFunction, IntegerDistance epsilon, int minpts) {
super();
this.similarityFunction = similarityFunction;
this.epsilon = epsilon;
@@ -310,18 +308,20 @@ public class SNNClustering<O, D extends Distance<D>> extends AbstractAlgorithm<C
* @author Erich Schubert
*
* @apiviz.exclude
+ *
+ * @param <O> object type
*/
- public static class Parameterizer<O, D extends Distance<D>> extends AbstractParameterizer {
+ public static class Parameterizer<O> extends AbstractParameterizer {
protected IntegerDistance epsilon;
protected int minpts;
- private SharedNearestNeighborSimilarityFunction<O, D> similarityFunction;
+ private SharedNearestNeighborSimilarityFunction<O> similarityFunction;
@Override
protected void makeOptions(Parameterization config) {
super.makeOptions(config);
- Class<SharedNearestNeighborSimilarityFunction<O, D>> cls = ClassGenericsUtil.uglyCastIntoSubclass(SharedNearestNeighborSimilarityFunction.class);
+ Class<SharedNearestNeighborSimilarityFunction<O>> cls = ClassGenericsUtil.uglyCastIntoSubclass(SharedNearestNeighborSimilarityFunction.class);
similarityFunction = config.tryInstantiate(cls);
DistanceParameter<IntegerDistance> epsilonP = new DistanceParameter<IntegerDistance>(EPSILON_ID, IntegerDistance.FACTORY);
@@ -336,8 +336,8 @@ public class SNNClustering<O, D extends Distance<D>> extends AbstractAlgorithm<C
}
@Override
- protected SNNClustering<O, D> makeInstance() {
- return new SNNClustering<O, D>(similarityFunction, epsilon, minpts);
+ protected SNNClustering<O> makeInstance() {
+ return new SNNClustering<O>(similarityFunction, epsilon, minpts);
}
}
} \ No newline at end of file
diff --git a/src/de/lmu/ifi/dbs/elki/algorithm/clustering/correlation/CASH.java b/src/de/lmu/ifi/dbs/elki/algorithm/clustering/correlation/CASH.java
index b2707ee7..4a0b391c 100644
--- a/src/de/lmu/ifi/dbs/elki/algorithm/clustering/correlation/CASH.java
+++ b/src/de/lmu/ifi/dbs/elki/algorithm/clustering/correlation/CASH.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.algorithm.clustering.correlation;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.Arrays;
import java.util.List;
diff --git a/src/de/lmu/ifi/dbs/elki/algorithm/clustering/correlation/COPAC.java b/src/de/lmu/ifi/dbs/elki/algorithm/clustering/correlation/COPAC.java
index c127f9d3..8fc30b3d 100644
--- a/src/de/lmu/ifi/dbs/elki/algorithm/clustering/correlation/COPAC.java
+++ b/src/de/lmu/ifi/dbs/elki/algorithm/clustering/correlation/COPAC.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.algorithm.clustering.correlation;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.Collection;
import java.util.HashMap;
diff --git a/src/de/lmu/ifi/dbs/elki/algorithm/clustering/correlation/ERiC.java b/src/de/lmu/ifi/dbs/elki/algorithm/clustering/correlation/ERiC.java
index 7867f3cf..75633853 100644
--- a/src/de/lmu/ifi/dbs/elki/algorithm/clustering/correlation/ERiC.java
+++ b/src/de/lmu/ifi/dbs/elki/algorithm/clustering/correlation/ERiC.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.algorithm.clustering.correlation;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.ArrayList;
import java.util.List;
diff --git a/src/de/lmu/ifi/dbs/elki/algorithm/clustering/correlation/FourC.java b/src/de/lmu/ifi/dbs/elki/algorithm/clustering/correlation/FourC.java
index 037243a4..93d0cc99 100644
--- a/src/de/lmu/ifi/dbs/elki/algorithm/clustering/correlation/FourC.java
+++ b/src/de/lmu/ifi/dbs/elki/algorithm/clustering/correlation/FourC.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.algorithm.clustering.correlation;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.algorithm.clustering.AbstractProjectedDBSCAN;
import de.lmu.ifi.dbs.elki.data.Clustering;
diff --git a/src/de/lmu/ifi/dbs/elki/algorithm/clustering/correlation/ORCLUS.java b/src/de/lmu/ifi/dbs/elki/algorithm/clustering/correlation/ORCLUS.java
index c904a921..924e1786 100644
--- a/src/de/lmu/ifi/dbs/elki/algorithm/clustering/correlation/ORCLUS.java
+++ b/src/de/lmu/ifi/dbs/elki/algorithm/clustering/correlation/ORCLUS.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.algorithm.clustering.correlation;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.ArrayList;
import java.util.Collections;
diff --git a/src/de/lmu/ifi/dbs/elki/algorithm/clustering/correlation/cash/CASHInterval.java b/src/de/lmu/ifi/dbs/elki/algorithm/clustering/correlation/cash/CASHInterval.java
index 83932e9c..6c5db740 100644
--- a/src/de/lmu/ifi/dbs/elki/algorithm/clustering/correlation/cash/CASHInterval.java
+++ b/src/de/lmu/ifi/dbs/elki/algorithm/clustering/correlation/cash/CASHInterval.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.algorithm.clustering.correlation.cash;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.logging.Logger;
diff --git a/src/de/lmu/ifi/dbs/elki/algorithm/clustering/correlation/cash/CASHIntervalSplit.java b/src/de/lmu/ifi/dbs/elki/algorithm/clustering/correlation/cash/CASHIntervalSplit.java
index e0f01b58..62ff658f 100644
--- a/src/de/lmu/ifi/dbs/elki/algorithm/clustering/correlation/cash/CASHIntervalSplit.java
+++ b/src/de/lmu/ifi/dbs/elki/algorithm/clustering/correlation/cash/CASHIntervalSplit.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.algorithm.clustering.correlation.cash;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.HashMap;
import java.util.Map;
diff --git a/src/de/lmu/ifi/dbs/elki/algorithm/clustering/subspace/CLIQUE.java b/src/de/lmu/ifi/dbs/elki/algorithm/clustering/subspace/CLIQUE.java
index dcb5690a..dfc4e1cd 100644
--- a/src/de/lmu/ifi/dbs/elki/algorithm/clustering/subspace/CLIQUE.java
+++ b/src/de/lmu/ifi/dbs/elki/algorithm/clustering/subspace/CLIQUE.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.algorithm.clustering.subspace;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.ArrayList;
import java.util.Collection;
diff --git a/src/de/lmu/ifi/dbs/elki/algorithm/clustering/subspace/DiSH.java b/src/de/lmu/ifi/dbs/elki/algorithm/clustering/subspace/DiSH.java
index 63ff12bd..987c7eda 100644
--- a/src/de/lmu/ifi/dbs/elki/algorithm/clustering/subspace/DiSH.java
+++ b/src/de/lmu/ifi/dbs/elki/algorithm/clustering/subspace/DiSH.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.algorithm.clustering.subspace;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.ArrayList;
import java.util.BitSet;
diff --git a/src/de/lmu/ifi/dbs/elki/algorithm/clustering/subspace/PROCLUS.java b/src/de/lmu/ifi/dbs/elki/algorithm/clustering/subspace/PROCLUS.java
index 70b9be21..92c2248c 100644
--- a/src/de/lmu/ifi/dbs/elki/algorithm/clustering/subspace/PROCLUS.java
+++ b/src/de/lmu/ifi/dbs/elki/algorithm/clustering/subspace/PROCLUS.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.algorithm.clustering.subspace;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.ArrayList;
import java.util.BitSet;
diff --git a/src/de/lmu/ifi/dbs/elki/algorithm/clustering/subspace/PreDeCon.java b/src/de/lmu/ifi/dbs/elki/algorithm/clustering/subspace/PreDeCon.java
index 1c58d717..22e9c150 100644
--- a/src/de/lmu/ifi/dbs/elki/algorithm/clustering/subspace/PreDeCon.java
+++ b/src/de/lmu/ifi/dbs/elki/algorithm/clustering/subspace/PreDeCon.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.algorithm.clustering.subspace;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.algorithm.clustering.AbstractProjectedDBSCAN;
import de.lmu.ifi.dbs.elki.data.Clustering;
diff --git a/src/de/lmu/ifi/dbs/elki/algorithm/clustering/subspace/SUBCLU.java b/src/de/lmu/ifi/dbs/elki/algorithm/clustering/subspace/SUBCLU.java
index 99e955f8..c0edb2ea 100644
--- a/src/de/lmu/ifi/dbs/elki/algorithm/clustering/subspace/SUBCLU.java
+++ b/src/de/lmu/ifi/dbs/elki/algorithm/clustering/subspace/SUBCLU.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.algorithm.clustering.subspace;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.ArrayList;
import java.util.BitSet;
diff --git a/src/de/lmu/ifi/dbs/elki/algorithm/clustering/subspace/clique/CLIQUESubspace.java b/src/de/lmu/ifi/dbs/elki/algorithm/clustering/subspace/clique/CLIQUESubspace.java
index 9715953d..1874c9e8 100644
--- a/src/de/lmu/ifi/dbs/elki/algorithm/clustering/subspace/clique/CLIQUESubspace.java
+++ b/src/de/lmu/ifi/dbs/elki/algorithm/clustering/subspace/clique/CLIQUESubspace.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.algorithm.clustering.subspace.clique;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.ArrayList;
import java.util.BitSet;
diff --git a/src/de/lmu/ifi/dbs/elki/algorithm/clustering/subspace/clique/CLIQUEUnit.java b/src/de/lmu/ifi/dbs/elki/algorithm/clustering/subspace/clique/CLIQUEUnit.java
index 495e3930..4b6fa9ad 100644
--- a/src/de/lmu/ifi/dbs/elki/algorithm/clustering/subspace/clique/CLIQUEUnit.java
+++ b/src/de/lmu/ifi/dbs/elki/algorithm/clustering/subspace/clique/CLIQUEUnit.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.algorithm.clustering.subspace.clique;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.HashMap;
import java.util.Iterator;
diff --git a/src/de/lmu/ifi/dbs/elki/algorithm/clustering/trivial/ByLabelClustering.java b/src/de/lmu/ifi/dbs/elki/algorithm/clustering/trivial/ByLabelClustering.java
index 5acd8cb3..87c2c482 100644
--- a/src/de/lmu/ifi/dbs/elki/algorithm/clustering/trivial/ByLabelClustering.java
+++ b/src/de/lmu/ifi/dbs/elki/algorithm/clustering/trivial/ByLabelClustering.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.algorithm.clustering.trivial;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.HashMap;
import java.util.Map.Entry;
@@ -28,12 +29,14 @@ import java.util.regex.Pattern;
import de.lmu.ifi.dbs.elki.algorithm.AbstractAlgorithm;
import de.lmu.ifi.dbs.elki.algorithm.clustering.ClusteringAlgorithm;
+import de.lmu.ifi.dbs.elki.data.ClassLabel;
import de.lmu.ifi.dbs.elki.data.Cluster;
import de.lmu.ifi.dbs.elki.data.Clustering;
import de.lmu.ifi.dbs.elki.data.model.ClusterModel;
import de.lmu.ifi.dbs.elki.data.model.Model;
import de.lmu.ifi.dbs.elki.data.type.TypeInformation;
import de.lmu.ifi.dbs.elki.data.type.TypeUtil;
+import de.lmu.ifi.dbs.elki.database.Database;
import de.lmu.ifi.dbs.elki.database.ids.DBID;
import de.lmu.ifi.dbs.elki.database.ids.DBIDUtil;
import de.lmu.ifi.dbs.elki.database.ids.ModifiableDBIDs;
@@ -116,6 +119,17 @@ public class ByLabelClustering extends AbstractAlgorithm<Clustering<Model>> impl
this(false, null);
}
+ @Override
+ public Clustering<Model> run(Database database) {
+ // Prefer a true class label
+ Relation<ClassLabel> relation = database.getRelation(TypeUtil.CLASSLABEL);
+ if(relation != null) {
+ return run(relation);
+ }
+ // Otherwise, try any labellike.
+ return run(database.getRelation(getInputTypeRestriction()[0]));
+ }
+
/**
* Run the actual clustering algorithm.
*
diff --git a/src/de/lmu/ifi/dbs/elki/algorithm/clustering/trivial/ByLabelHierarchicalClustering.java b/src/de/lmu/ifi/dbs/elki/algorithm/clustering/trivial/ByLabelHierarchicalClustering.java
index 16c68e54..3bda8174 100644
--- a/src/de/lmu/ifi/dbs/elki/algorithm/clustering/trivial/ByLabelHierarchicalClustering.java
+++ b/src/de/lmu/ifi/dbs/elki/algorithm/clustering/trivial/ByLabelHierarchicalClustering.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.algorithm.clustering.trivial;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.ArrayList;
import java.util.HashMap;
@@ -28,6 +29,7 @@ import java.util.Map.Entry;
import de.lmu.ifi.dbs.elki.algorithm.AbstractAlgorithm;
import de.lmu.ifi.dbs.elki.algorithm.clustering.ClusteringAlgorithm;
+import de.lmu.ifi.dbs.elki.data.ClassLabel;
import de.lmu.ifi.dbs.elki.data.Cluster;
import de.lmu.ifi.dbs.elki.data.Clustering;
import de.lmu.ifi.dbs.elki.data.model.ClusterModel;
@@ -67,7 +69,7 @@ public class ByLabelHierarchicalClustering extends AbstractAlgorithm<Clustering<
* The logger for this class.
*/
private static final Logging logger = Logging.getLogger(ByLabelHierarchicalClustering.class);
-
+
/**
* Constructor without parameters
*/
@@ -75,13 +77,23 @@ public class ByLabelHierarchicalClustering extends AbstractAlgorithm<Clustering<
super();
}
+ @Override
+ public Clustering<Model> run(Database database) {
+ // Prefer a true class label
+ Relation<ClassLabel> relation = database.getRelation(TypeUtil.CLASSLABEL);
+ if(relation != null) {
+ return run(relation);
+ }
+ // Otherwise, try any labellike.
+ return run(database.getRelation(getInputTypeRestriction()[0]));
+ }
+
/**
* Run the actual clustering algorithm.
*
- * @param database The database to process
* @param relation The data input to use
*/
- public Clustering<Model> run(Database database, Relation<?> relation) throws IllegalStateException {
+ public Clustering<Model> run(Relation<?> relation) throws IllegalStateException {
HashMap<String, ModifiableDBIDs> labelmap = new HashMap<String, ModifiableDBIDs>();
ModifiableDBIDs noiseids = DBIDUtil.newArray();
@@ -133,7 +145,7 @@ public class ByLabelHierarchicalClustering extends AbstractAlgorithm<Clustering<
c.setNoise(true);
rootclusters.add(c);
}
- assert (rootclusters.size() > 0);
+ assert (rootclusters.size() > 0) : "No clusters found by bylabel clustering. Empty database?";
return new Clustering<Model>("By Label Hierarchical Clustering", "bylabel-clustering", rootclusters);
}
diff --git a/src/de/lmu/ifi/dbs/elki/algorithm/clustering/trivial/TrivialAllInOne.java b/src/de/lmu/ifi/dbs/elki/algorithm/clustering/trivial/TrivialAllInOne.java
index 0e207e2b..a316ce57 100644
--- a/src/de/lmu/ifi/dbs/elki/algorithm/clustering/trivial/TrivialAllInOne.java
+++ b/src/de/lmu/ifi/dbs/elki/algorithm/clustering/trivial/TrivialAllInOne.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.algorithm.clustering.trivial;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.algorithm.AbstractAlgorithm;
import de.lmu.ifi.dbs.elki.algorithm.clustering.ClusteringAlgorithm;
diff --git a/src/de/lmu/ifi/dbs/elki/algorithm/clustering/trivial/TrivialAllNoise.java b/src/de/lmu/ifi/dbs/elki/algorithm/clustering/trivial/TrivialAllNoise.java
index 37e8da13..b85f5445 100644
--- a/src/de/lmu/ifi/dbs/elki/algorithm/clustering/trivial/TrivialAllNoise.java
+++ b/src/de/lmu/ifi/dbs/elki/algorithm/clustering/trivial/TrivialAllNoise.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.algorithm.clustering.trivial;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.algorithm.AbstractAlgorithm;
import de.lmu.ifi.dbs.elki.algorithm.clustering.ClusteringAlgorithm;
diff --git a/src/de/lmu/ifi/dbs/elki/algorithm/outlier/ABOD.java b/src/de/lmu/ifi/dbs/elki/algorithm/outlier/ABOD.java
index 5af777db..50365996 100644
--- a/src/de/lmu/ifi/dbs/elki/algorithm/outlier/ABOD.java
+++ b/src/de/lmu/ifi/dbs/elki/algorithm/outlier/ABOD.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.algorithm.outlier;
-/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.Collections;
import java.util.HashMap;
@@ -360,7 +361,7 @@ public class ABOD<V extends NumberVector<V, ?>> extends AbstractDistanceBasedAlg
return result;
}
- private double[] calcFastNormalization(@SuppressWarnings("unused") DBID x, HashMap<DBID, Double> dists) {
+ private double[] calcFastNormalization(DBID x, HashMap<DBID, Double> dists) {
double[] result = new double[2];
double sum = 0;
diff --git a/src/de/lmu/ifi/dbs/elki/algorithm/outlier/AbstractAggarwalYuOutlier.java b/src/de/lmu/ifi/dbs/elki/algorithm/outlier/AbstractAggarwalYuOutlier.java
index a8273c5b..3be73ca6 100644
--- a/src/de/lmu/ifi/dbs/elki/algorithm/outlier/AbstractAggarwalYuOutlier.java
+++ b/src/de/lmu/ifi/dbs/elki/algorithm/outlier/AbstractAggarwalYuOutlier.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.algorithm.outlier;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.ArrayList;
import java.util.Collections;
diff --git a/src/de/lmu/ifi/dbs/elki/algorithm/outlier/LOCI.java b/src/de/lmu/ifi/dbs/elki/algorithm/outlier/LOCI.java
index 26919ed5..57c04be3 100644
--- a/src/de/lmu/ifi/dbs/elki/algorithm/outlier/LOCI.java
+++ b/src/de/lmu/ifi/dbs/elki/algorithm/outlier/LOCI.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.algorithm.outlier;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.ArrayList;
import java.util.Collections;
diff --git a/src/de/lmu/ifi/dbs/elki/algorithm/outlier/LOF.java b/src/de/lmu/ifi/dbs/elki/algorithm/outlier/LOF.java
index 9eb373e3..5f5f3568 100644
--- a/src/de/lmu/ifi/dbs/elki/algorithm/outlier/LOF.java
+++ b/src/de/lmu/ifi/dbs/elki/algorithm/outlier/LOF.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.algorithm.outlier;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.List;
diff --git a/src/de/lmu/ifi/dbs/elki/algorithm/outlier/LoOP.java b/src/de/lmu/ifi/dbs/elki/algorithm/outlier/LoOP.java
index 967dff03..dfb32bb9 100644
--- a/src/de/lmu/ifi/dbs/elki/algorithm/outlier/LoOP.java
+++ b/src/de/lmu/ifi/dbs/elki/algorithm/outlier/LoOP.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.algorithm.outlier;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.List;
diff --git a/src/de/lmu/ifi/dbs/elki/algorithm/outlier/OutlierAlgorithm.java b/src/de/lmu/ifi/dbs/elki/algorithm/outlier/OutlierAlgorithm.java
index 8e9a0c4f..fb0a89d5 100644
--- a/src/de/lmu/ifi/dbs/elki/algorithm/outlier/OutlierAlgorithm.java
+++ b/src/de/lmu/ifi/dbs/elki/algorithm/outlier/OutlierAlgorithm.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.algorithm.outlier;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.algorithm.Algorithm;
import de.lmu.ifi.dbs.elki.database.Database;
diff --git a/src/de/lmu/ifi/dbs/elki/algorithm/outlier/SOD.java b/src/de/lmu/ifi/dbs/elki/algorithm/outlier/SOD.java
index 2ca71178..5e7184a3 100644
--- a/src/de/lmu/ifi/dbs/elki/algorithm/outlier/SOD.java
+++ b/src/de/lmu/ifi/dbs/elki/algorithm/outlier/SOD.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.algorithm.outlier;
-/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.BitSet;
import java.util.Iterator;
@@ -38,16 +39,15 @@ import de.lmu.ifi.dbs.elki.database.ids.DBID;
import de.lmu.ifi.dbs.elki.database.ids.DBIDs;
import de.lmu.ifi.dbs.elki.database.query.DoubleDistanceResultPair;
import de.lmu.ifi.dbs.elki.database.query.similarity.SimilarityQuery;
+import de.lmu.ifi.dbs.elki.database.relation.MaterializedRelation;
import de.lmu.ifi.dbs.elki.database.relation.Relation;
import de.lmu.ifi.dbs.elki.distance.distancefunction.subspace.DimensionsSelectingEuclideanDistanceFunction;
-import de.lmu.ifi.dbs.elki.distance.distancevalue.Distance;
import de.lmu.ifi.dbs.elki.distance.distancevalue.DoubleDistance;
import de.lmu.ifi.dbs.elki.distance.distancevalue.IntegerDistance;
import de.lmu.ifi.dbs.elki.distance.similarityfunction.SharedNearestNeighborSimilarityFunction;
import de.lmu.ifi.dbs.elki.logging.Logging;
import de.lmu.ifi.dbs.elki.logging.progress.FiniteProgress;
import de.lmu.ifi.dbs.elki.math.DoubleMinMax;
-import de.lmu.ifi.dbs.elki.database.relation.MaterializedRelation;
import de.lmu.ifi.dbs.elki.result.ResultHierarchy;
import de.lmu.ifi.dbs.elki.result.outlier.BasicOutlierScoreMeta;
import de.lmu.ifi.dbs.elki.result.outlier.OutlierResult;
@@ -77,13 +77,12 @@ import de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters.IntParameter;
* @apiviz.has SharedNearestNeighborSimilarityFunction
*
* @param <V> the type of NumberVector handled by this Algorithm
- * @param <D> the type of Distance used by this Algorithm
*/
// todo arthur comment
@Title("SOD: Subspace outlier degree")
@Description("Outlier Detection in Axis-Parallel Subspaces of High Dimensional Data")
@Reference(authors = "H.-P. Kriegel, P. Kröger, E. Schubert, A. Zimek", title = "Outlier Detection in Axis-Parallel Subspaces of High Dimensional Data", booktitle = "Proceedings of the 13th Pacific-Asia Conference on Knowledge Discovery and Data Mining (PAKDD), Bangkok, Thailand, 2009", url = "http://dx.doi.org/10.1007/978-3-642-01307-2")
-public class SOD<V extends NumberVector<V, ?>, D extends Distance<D>> extends AbstractAlgorithm<OutlierResult> implements OutlierAlgorithm {
+public class SOD<V extends NumberVector<V, ?>> extends AbstractAlgorithm<OutlierResult> implements OutlierAlgorithm {
/**
* The logger for this class.
*/
@@ -115,7 +114,7 @@ public class SOD<V extends NumberVector<V, ?>, D extends Distance<D>> extends Ab
/**
* The similarity function.
*/
- private SharedNearestNeighborSimilarityFunction<V, D> similarityFunction;
+ private SharedNearestNeighborSimilarityFunction<V> similarityFunction;
/**
* Constructor with parameters.
@@ -124,7 +123,7 @@ public class SOD<V extends NumberVector<V, ?>, D extends Distance<D>> extends Ab
* @param alpha Alpha parameter
* @param similarityFunction Shared nearest neighbor similarity function
*/
- public SOD(int knn, double alpha, SharedNearestNeighborSimilarityFunction<V, D> similarityFunction) {
+ public SOD(int knn, double alpha, SharedNearestNeighborSimilarityFunction<V> similarityFunction) {
super();
this.knn = knn;
this.alpha = alpha;
@@ -365,13 +364,11 @@ public class SOD<V extends NumberVector<V, ?>, D extends Distance<D>> extends Ab
return null; // FIXME
}
- @SuppressWarnings("unused")
@Override
public void set(DBID id, Double val) {
throw new UnsupportedOperationException();
}
- @SuppressWarnings("unused")
@Override
public void delete(DBID id) {
throw new UnsupportedOperationException();
@@ -405,7 +402,7 @@ public class SOD<V extends NumberVector<V, ?>, D extends Distance<D>> extends Ab
*
* @apiviz.exclude
*/
- public static class Parameterizer<V extends NumberVector<V, ?>, D extends Distance<D>> extends AbstractParameterizer {
+ public static class Parameterizer<V extends NumberVector<V, ?>> extends AbstractParameterizer {
/**
* Holds the value of {@link #KNN_ID}.
*/
@@ -419,7 +416,7 @@ public class SOD<V extends NumberVector<V, ?>, D extends Distance<D>> extends Ab
/**
* The similarity function.
*/
- private SharedNearestNeighborSimilarityFunction<V, D> similarityFunction;
+ private SharedNearestNeighborSimilarityFunction<V> similarityFunction;
@Override
protected void makeOptions(Parameterization config) {
@@ -434,13 +431,13 @@ public class SOD<V extends NumberVector<V, ?>, D extends Distance<D>> extends Ab
alpha = alphaP.getValue();
}
- Class<SharedNearestNeighborSimilarityFunction<V, D>> cls = ClassGenericsUtil.uglyCastIntoSubclass(SharedNearestNeighborSimilarityFunction.class);
+ Class<SharedNearestNeighborSimilarityFunction<V>> cls = ClassGenericsUtil.uglyCastIntoSubclass(SharedNearestNeighborSimilarityFunction.class);
similarityFunction = config.tryInstantiate(cls);
}
@Override
- protected SOD<V, D> makeInstance() {
- return new SOD<V, D>(knn, alpha, similarityFunction);
+ protected SOD<V> makeInstance() {
+ return new SOD<V>(knn, alpha, similarityFunction);
}
}
} \ No newline at end of file
diff --git a/src/de/lmu/ifi/dbs/elki/algorithm/outlier/meta/ExternalDoubleOutlierScore.java b/src/de/lmu/ifi/dbs/elki/algorithm/outlier/meta/ExternalDoubleOutlierScore.java
index 0131d4f7..5a4503fd 100644
--- a/src/de/lmu/ifi/dbs/elki/algorithm/outlier/meta/ExternalDoubleOutlierScore.java
+++ b/src/de/lmu/ifi/dbs/elki/algorithm/outlier/meta/ExternalDoubleOutlierScore.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.algorithm.outlier.meta;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.io.BufferedReader;
import java.io.File;
diff --git a/src/de/lmu/ifi/dbs/elki/algorithm/outlier/meta/FeatureBagging.java b/src/de/lmu/ifi/dbs/elki/algorithm/outlier/meta/FeatureBagging.java
index 7b7a0146..d3e738a1 100644
--- a/src/de/lmu/ifi/dbs/elki/algorithm/outlier/meta/FeatureBagging.java
+++ b/src/de/lmu/ifi/dbs/elki/algorithm/outlier/meta/FeatureBagging.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.algorithm.outlier.meta;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.ArrayList;
import java.util.BitSet;
diff --git a/src/de/lmu/ifi/dbs/elki/algorithm/outlier/meta/RescaleMetaOutlierAlgorithm.java b/src/de/lmu/ifi/dbs/elki/algorithm/outlier/meta/RescaleMetaOutlierAlgorithm.java
index e3033511..18f62549 100644
--- a/src/de/lmu/ifi/dbs/elki/algorithm/outlier/meta/RescaleMetaOutlierAlgorithm.java
+++ b/src/de/lmu/ifi/dbs/elki/algorithm/outlier/meta/RescaleMetaOutlierAlgorithm.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.algorithm.outlier.meta;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.List;
diff --git a/src/de/lmu/ifi/dbs/elki/algorithm/outlier/spatial/AbstractDistanceBasedSpatialOutlier.java b/src/de/lmu/ifi/dbs/elki/algorithm/outlier/spatial/AbstractDistanceBasedSpatialOutlier.java
index cf5a906d..79fae09d 100644
--- a/src/de/lmu/ifi/dbs/elki/algorithm/outlier/spatial/AbstractDistanceBasedSpatialOutlier.java
+++ b/src/de/lmu/ifi/dbs/elki/algorithm/outlier/spatial/AbstractDistanceBasedSpatialOutlier.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.algorithm.outlier.spatial;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.algorithm.outlier.spatial.neighborhood.NeighborSetPredicate;
import de.lmu.ifi.dbs.elki.distance.distancefunction.DistanceFunction;
diff --git a/src/de/lmu/ifi/dbs/elki/algorithm/outlier/spatial/AbstractNeighborhoodOutlier.java b/src/de/lmu/ifi/dbs/elki/algorithm/outlier/spatial/AbstractNeighborhoodOutlier.java
index fa2c8d24..4e1e0fa1 100644
--- a/src/de/lmu/ifi/dbs/elki/algorithm/outlier/spatial/AbstractNeighborhoodOutlier.java
+++ b/src/de/lmu/ifi/dbs/elki/algorithm/outlier/spatial/AbstractNeighborhoodOutlier.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.algorithm.outlier.spatial;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.algorithm.AbstractAlgorithm;
import de.lmu.ifi.dbs.elki.algorithm.outlier.OutlierAlgorithm;
diff --git a/src/de/lmu/ifi/dbs/elki/algorithm/outlier/spatial/CTLuGLSBackwardSearchAlgorithm.java b/src/de/lmu/ifi/dbs/elki/algorithm/outlier/spatial/CTLuGLSBackwardSearchAlgorithm.java
index d4a709d0..e8a7415b 100644
--- a/src/de/lmu/ifi/dbs/elki/algorithm/outlier/spatial/CTLuGLSBackwardSearchAlgorithm.java
+++ b/src/de/lmu/ifi/dbs/elki/algorithm/outlier/spatial/CTLuGLSBackwardSearchAlgorithm.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.algorithm.outlier.spatial;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.Collections;
import java.util.List;
diff --git a/src/de/lmu/ifi/dbs/elki/algorithm/outlier/spatial/CTLuMeanMultipleAttributes.java b/src/de/lmu/ifi/dbs/elki/algorithm/outlier/spatial/CTLuMeanMultipleAttributes.java
index 71a460ab..516c2ade 100644
--- a/src/de/lmu/ifi/dbs/elki/algorithm/outlier/spatial/CTLuMeanMultipleAttributes.java
+++ b/src/de/lmu/ifi/dbs/elki/algorithm/outlier/spatial/CTLuMeanMultipleAttributes.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.algorithm.outlier.spatial;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.algorithm.outlier.spatial.neighborhood.NeighborSetPredicate;
import de.lmu.ifi.dbs.elki.data.NumberVector;
@@ -126,7 +127,9 @@ public class CTLuMeanMultipleAttributes<N, O extends NumberVector<?, ?>> extends
Relation<Double> scoreResult = new MaterializedRelation<Double>("mean multiple attributes spatial outlier", "mean-multipleattributes-outlier", TypeUtil.DOUBLE, scores, attributes.getDBIDs());
OutlierScoreMeta scoreMeta = new BasicOutlierScoreMeta(minmax.getMin(), minmax.getMax(), 0.0, Double.POSITIVE_INFINITY, 0);
- return new OutlierResult(scoreMeta, scoreResult);
+ OutlierResult or = new OutlierResult(scoreMeta, scoreResult);
+ or.addChildResult(npred);
+ return or;
}
@Override
diff --git a/src/de/lmu/ifi/dbs/elki/algorithm/outlier/spatial/CTLuMedianAlgorithm.java b/src/de/lmu/ifi/dbs/elki/algorithm/outlier/spatial/CTLuMedianAlgorithm.java
index 466761b4..7f397790 100644
--- a/src/de/lmu/ifi/dbs/elki/algorithm/outlier/spatial/CTLuMedianAlgorithm.java
+++ b/src/de/lmu/ifi/dbs/elki/algorithm/outlier/spatial/CTLuMedianAlgorithm.java
@@ -134,7 +134,9 @@ public class CTLuMedianAlgorithm<N> extends AbstractNeighborhoodOutlier<N> {
Relation<Double> scoreResult = new MaterializedRelation<Double>("MO", "Median-outlier", TypeUtil.DOUBLE, scores, relation.getDBIDs());
OutlierScoreMeta scoreMeta = new BasicOutlierScoreMeta(minmax.getMin(), minmax.getMax(), 0.0, Double.POSITIVE_INFINITY, 0);
- return new OutlierResult(scoreMeta, scoreResult);
+ OutlierResult or = new OutlierResult(scoreMeta, scoreResult);
+ or.addChildResult(npred);
+ return or;
}
@Override
diff --git a/src/de/lmu/ifi/dbs/elki/algorithm/outlier/spatial/CTLuMedianMultipleAttributes.java b/src/de/lmu/ifi/dbs/elki/algorithm/outlier/spatial/CTLuMedianMultipleAttributes.java
index 4d4b3f4a..649511eb 100644
--- a/src/de/lmu/ifi/dbs/elki/algorithm/outlier/spatial/CTLuMedianMultipleAttributes.java
+++ b/src/de/lmu/ifi/dbs/elki/algorithm/outlier/spatial/CTLuMedianMultipleAttributes.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.algorithm.outlier.spatial;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.algorithm.outlier.spatial.neighborhood.NeighborSetPredicate;
import de.lmu.ifi.dbs.elki.data.NumberVector;
@@ -152,7 +153,9 @@ public class CTLuMedianMultipleAttributes<N, O extends NumberVector<?, ?>> exten
Relation<Double> scoreResult = new MaterializedRelation<Double>("Median multiple attributes outlier", "median-outlier", TypeUtil.DOUBLE, scores, attributes.getDBIDs());
OutlierScoreMeta scoreMeta = new BasicOutlierScoreMeta(minmax.getMin(), minmax.getMax(), 0.0, Double.POSITIVE_INFINITY, 0);
- return new OutlierResult(scoreMeta, scoreResult);
+ OutlierResult or = new OutlierResult(scoreMeta, scoreResult);
+ or.addChildResult(npred);
+ return or;
}
@Override
diff --git a/src/de/lmu/ifi/dbs/elki/algorithm/outlier/spatial/CTLuMoranScatterplotOutlier.java b/src/de/lmu/ifi/dbs/elki/algorithm/outlier/spatial/CTLuMoranScatterplotOutlier.java
index 2e297a63..6780fcc9 100644
--- a/src/de/lmu/ifi/dbs/elki/algorithm/outlier/spatial/CTLuMoranScatterplotOutlier.java
+++ b/src/de/lmu/ifi/dbs/elki/algorithm/outlier/spatial/CTLuMoranScatterplotOutlier.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.algorithm.outlier.spatial;
-/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.algorithm.outlier.spatial.neighborhood.NeighborSetPredicate;
import de.lmu.ifi.dbs.elki.algorithm.outlier.spatial.neighborhood.NeighborSetPredicate.Factory;
@@ -136,7 +137,9 @@ public class CTLuMoranScatterplotOutlier<N> extends AbstractNeighborhoodOutlier<
Relation<Double> scoreResult = new MaterializedRelation<Double>("MoranOutlier", "Moran Scatterplot Outlier", TypeUtil.DOUBLE, scores, relation.getDBIDs());
OutlierScoreMeta scoreMeta = new BasicOutlierScoreMeta(minmax.getMin(), minmax.getMax(), Double.NEGATIVE_INFINITY, Double.POSITIVE_INFINITY, 0);
- return new OutlierResult(scoreMeta, scoreResult);
+ OutlierResult or = new OutlierResult(scoreMeta, scoreResult);
+ or.addChildResult(npred);
+ return or;
}
@Override
diff --git a/src/de/lmu/ifi/dbs/elki/algorithm/outlier/spatial/CTLuScatterplotOutlier.java b/src/de/lmu/ifi/dbs/elki/algorithm/outlier/spatial/CTLuScatterplotOutlier.java
index a5686258..d18e4130 100644
--- a/src/de/lmu/ifi/dbs/elki/algorithm/outlier/spatial/CTLuScatterplotOutlier.java
+++ b/src/de/lmu/ifi/dbs/elki/algorithm/outlier/spatial/CTLuScatterplotOutlier.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.algorithm.outlier.spatial;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.algorithm.outlier.spatial.neighborhood.NeighborSetPredicate;
import de.lmu.ifi.dbs.elki.data.NumberVector;
@@ -160,7 +161,9 @@ public class CTLuScatterplotOutlier<N> extends AbstractNeighborhoodOutlier<N> {
// build representation
Relation<Double> scoreResult = new MaterializedRelation<Double>("SPO", "Scatterplot-Outlier", TypeUtil.DOUBLE, scores, relation.getDBIDs());
OutlierScoreMeta scoreMeta = new BasicOutlierScoreMeta(minmax.getMin(), minmax.getMax(), 0.0, Double.POSITIVE_INFINITY, 0);
- return new OutlierResult(scoreMeta, scoreResult);
+ OutlierResult or = new OutlierResult(scoreMeta, scoreResult);
+ or.addChildResult(npred);
+ return or;
}
@Override
diff --git a/src/de/lmu/ifi/dbs/elki/algorithm/outlier/spatial/CTLuZTestOutlier.java b/src/de/lmu/ifi/dbs/elki/algorithm/outlier/spatial/CTLuZTestOutlier.java
index 0568e3c2..304203db 100644
--- a/src/de/lmu/ifi/dbs/elki/algorithm/outlier/spatial/CTLuZTestOutlier.java
+++ b/src/de/lmu/ifi/dbs/elki/algorithm/outlier/spatial/CTLuZTestOutlier.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.algorithm.outlier.spatial;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.algorithm.outlier.spatial.neighborhood.NeighborSetPredicate;
import de.lmu.ifi.dbs.elki.data.NumberVector;
@@ -135,7 +136,9 @@ public class CTLuZTestOutlier<N> extends AbstractNeighborhoodOutlier<N> {
// Wrap result
Relation<Double> scoreResult = new MaterializedRelation<Double>("ZTest", "Z Test score", TypeUtil.DOUBLE, scores, relation.getDBIDs());
OutlierScoreMeta scoreMeta = new BasicOutlierScoreMeta(minmax.getMin(), minmax.getMax(), 0.0, Double.POSITIVE_INFINITY, 0);
- return new OutlierResult(scoreMeta, scoreResult);
+ OutlierResult or = new OutlierResult(scoreMeta, scoreResult);
+ or.addChildResult(npred);
+ return or;
}
@Override
diff --git a/src/de/lmu/ifi/dbs/elki/algorithm/outlier/spatial/SLOM.java b/src/de/lmu/ifi/dbs/elki/algorithm/outlier/spatial/SLOM.java
index 5938669a..af8762e0 100644
--- a/src/de/lmu/ifi/dbs/elki/algorithm/outlier/spatial/SLOM.java
+++ b/src/de/lmu/ifi/dbs/elki/algorithm/outlier/spatial/SLOM.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.algorithm.outlier.spatial;
-/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.algorithm.outlier.spatial.neighborhood.NeighborSetPredicate;
import de.lmu.ifi.dbs.elki.data.type.TypeInformation;
@@ -187,7 +188,9 @@ public class SLOM<N, O, D extends NumberDistance<D, ?>> extends AbstractDistance
Relation<Double> scoreResult = new MaterializedRelation<Double>("SLOM", "slom-outlier", TypeUtil.DOUBLE, sloms, relation.getDBIDs());
OutlierScoreMeta scoreMeta = new BasicOutlierScoreMeta(slomminmax.getMin(), slomminmax.getMax(), 0.0, Double.POSITIVE_INFINITY);
- return new OutlierResult(scoreMeta, scoreResult);
+ OutlierResult or = new OutlierResult(scoreMeta, scoreResult);
+ or.addChildResult(npred);
+ return or;
}
@Override
diff --git a/src/de/lmu/ifi/dbs/elki/algorithm/outlier/spatial/SOF.java b/src/de/lmu/ifi/dbs/elki/algorithm/outlier/spatial/SOF.java
index 68dc07b1..e3ede8bb 100644
--- a/src/de/lmu/ifi/dbs/elki/algorithm/outlier/spatial/SOF.java
+++ b/src/de/lmu/ifi/dbs/elki/algorithm/outlier/spatial/SOF.java
@@ -140,8 +140,9 @@ public class SOF<N, O, D extends NumberDistance<D, ?>> extends AbstractDistanceB
// Build result representation.
Relation<Double> scoreResult = new MaterializedRelation<Double>("Spatial Outlier Factor", "sof-outlier", TypeUtil.DOUBLE, lofs, relation.getDBIDs());
OutlierScoreMeta scoreMeta = new QuotientOutlierScoreMeta(lofminmax.getMin(), lofminmax.getMax(), 0.0, Double.POSITIVE_INFINITY, 1.0);
- OutlierResult result = new OutlierResult(scoreMeta, scoreResult);
- return result;
+ OutlierResult or = new OutlierResult(scoreMeta, scoreResult);
+ or.addChildResult(npred);
+ return or;
}
@Override
diff --git a/src/de/lmu/ifi/dbs/elki/algorithm/outlier/spatial/TrimmedMeanApproach.java b/src/de/lmu/ifi/dbs/elki/algorithm/outlier/spatial/TrimmedMeanApproach.java
index ce0b77ab..d99ecc99 100644
--- a/src/de/lmu/ifi/dbs/elki/algorithm/outlier/spatial/TrimmedMeanApproach.java
+++ b/src/de/lmu/ifi/dbs/elki/algorithm/outlier/spatial/TrimmedMeanApproach.java
@@ -188,7 +188,9 @@ public class TrimmedMeanApproach<N> extends AbstractNeighborhoodOutlier<N> {
//
Relation<Double> scoreResult = new MaterializedRelation<Double>("TrimmedMean", "Trimmed Mean Score", TypeUtil.DOUBLE, scores, relation.getDBIDs());
OutlierScoreMeta scoreMeta = new BasicOutlierScoreMeta(minmax.getMin(), minmax.getMax(), 0.0, Double.POSITIVE_INFINITY, 0);
- return new OutlierResult(scoreMeta, scoreResult);
+ OutlierResult or = new OutlierResult(scoreMeta, scoreResult);
+ or.addChildResult(npred);
+ return or;
}
@Override
diff --git a/src/de/lmu/ifi/dbs/elki/algorithm/outlier/spatial/neighborhood/AbstractPrecomputedNeighborhood.java b/src/de/lmu/ifi/dbs/elki/algorithm/outlier/spatial/neighborhood/AbstractPrecomputedNeighborhood.java
index 92d20789..df28de24 100644
--- a/src/de/lmu/ifi/dbs/elki/algorithm/outlier/spatial/neighborhood/AbstractPrecomputedNeighborhood.java
+++ b/src/de/lmu/ifi/dbs/elki/algorithm/outlier/spatial/neighborhood/AbstractPrecomputedNeighborhood.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.algorithm.outlier.spatial.neighborhood;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.database.datastore.DataStore;
import de.lmu.ifi.dbs.elki.database.ids.DBID;
diff --git a/src/de/lmu/ifi/dbs/elki/algorithm/outlier/spatial/neighborhood/ExtendedNeighborhood.java b/src/de/lmu/ifi/dbs/elki/algorithm/outlier/spatial/neighborhood/ExtendedNeighborhood.java
index a18d8bc4..640c30fe 100644
--- a/src/de/lmu/ifi/dbs/elki/algorithm/outlier/spatial/neighborhood/ExtendedNeighborhood.java
+++ b/src/de/lmu/ifi/dbs/elki/algorithm/outlier/spatial/neighborhood/ExtendedNeighborhood.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.algorithm.outlier.spatial.neighborhood;
-/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.data.type.TypeInformation;
import de.lmu.ifi.dbs.elki.database.datastore.DataStore;
@@ -34,8 +35,6 @@ import de.lmu.ifi.dbs.elki.database.ids.ModifiableDBIDs;
import de.lmu.ifi.dbs.elki.database.relation.Relation;
import de.lmu.ifi.dbs.elki.logging.Logging;
import de.lmu.ifi.dbs.elki.logging.progress.FiniteProgress;
-import de.lmu.ifi.dbs.elki.result.Result;
-import de.lmu.ifi.dbs.elki.result.ResultHierarchy;
import de.lmu.ifi.dbs.elki.utilities.optionhandling.AbstractParameterizer;
import de.lmu.ifi.dbs.elki.utilities.optionhandling.OptionID;
import de.lmu.ifi.dbs.elki.utilities.optionhandling.constraints.GreaterEqualConstraint;
@@ -49,11 +48,11 @@ import de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters.ObjectParameter;
*
* @author Erich Schubert
*/
-public class ExtendedNeighborhood extends AbstractPrecomputedNeighborhood implements Result {
+public class ExtendedNeighborhood extends AbstractPrecomputedNeighborhood {
/**
* The logger to use.
*/
- private static final Logging logger = Logging.getLogger(ExtendedNeighborhood.class);
+ static final Logging logger = Logging.getLogger(ExtendedNeighborhood.class);
/**
* Constructor.
@@ -89,11 +88,6 @@ public class ExtendedNeighborhood extends AbstractPrecomputedNeighborhood implem
*/
public static class Factory<O> extends AbstractPrecomputedNeighborhood.Factory<O> {
/**
- * Logger
- */
- private static final Logging logger = Logging.getLogger(ExtendedNeighborhood.class);
-
- /**
* Inner neighbor set predicate
*/
private NeighborSetPredicate.Factory<O> inner;
@@ -119,10 +113,6 @@ public class ExtendedNeighborhood extends AbstractPrecomputedNeighborhood implem
public NeighborSetPredicate instantiate(Relation<? extends O> database) {
DataStore<DBIDs> store = extendNeighborhood(database);
ExtendedNeighborhood neighborhood = new ExtendedNeighborhood(store);
- ResultHierarchy hier = database.getHierarchy();
- if(hier != null) {
- hier.add(database, neighborhood);
- }
return neighborhood;
}
diff --git a/src/de/lmu/ifi/dbs/elki/algorithm/outlier/spatial/neighborhood/ExternalNeighborhood.java b/src/de/lmu/ifi/dbs/elki/algorithm/outlier/spatial/neighborhood/ExternalNeighborhood.java
index f70c7471..789a63e7 100644
--- a/src/de/lmu/ifi/dbs/elki/algorithm/outlier/spatial/neighborhood/ExternalNeighborhood.java
+++ b/src/de/lmu/ifi/dbs/elki/algorithm/outlier/spatial/neighborhood/ExternalNeighborhood.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.algorithm.outlier.spatial.neighborhood;
-/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.io.BufferedReader;
import java.io.File;
@@ -45,8 +46,6 @@ import de.lmu.ifi.dbs.elki.database.ids.DBIDUtil;
import de.lmu.ifi.dbs.elki.database.ids.DBIDs;
import de.lmu.ifi.dbs.elki.database.relation.Relation;
import de.lmu.ifi.dbs.elki.logging.Logging;
-import de.lmu.ifi.dbs.elki.result.Result;
-import de.lmu.ifi.dbs.elki.result.ResultHierarchy;
import de.lmu.ifi.dbs.elki.utilities.FileUtil;
import de.lmu.ifi.dbs.elki.utilities.exceptions.AbortException;
import de.lmu.ifi.dbs.elki.utilities.optionhandling.AbstractParameterizer;
@@ -59,11 +58,11 @@ import de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters.FileParameter;
*
* @author Erich Schubert
*/
-public class ExternalNeighborhood extends AbstractPrecomputedNeighborhood implements Result {
+public class ExternalNeighborhood extends AbstractPrecomputedNeighborhood {
/**
* Logger
*/
- private static final Logging logger = Logging.getLogger(ExternalNeighborhood.class);
+ static final Logging logger = Logging.getLogger(ExternalNeighborhood.class);
/**
* Parameter to specify the neighborhood file
@@ -104,11 +103,6 @@ public class ExternalNeighborhood extends AbstractPrecomputedNeighborhood implem
*/
public static class Factory extends AbstractPrecomputedNeighborhood.Factory<Object> {
/**
- * Logger
- */
- private static final Logging logger = Logging.getLogger(ExternalNeighborhood.class);
-
- /**
* The input file.
*/
private File file;
@@ -127,10 +121,6 @@ public class ExternalNeighborhood extends AbstractPrecomputedNeighborhood implem
public NeighborSetPredicate instantiate(Relation<?> database) {
DataStore<DBIDs> store = loadNeighbors(database);
ExternalNeighborhood neighborhood = new ExternalNeighborhood(store);
- ResultHierarchy hier = database.getHierarchy();
- if(hier != null) {
- hier.add(database, neighborhood);
- }
return neighborhood;
}
diff --git a/src/de/lmu/ifi/dbs/elki/algorithm/outlier/spatial/neighborhood/NeighborSetPredicate.java b/src/de/lmu/ifi/dbs/elki/algorithm/outlier/spatial/neighborhood/NeighborSetPredicate.java
index 3d565767..6683b3fd 100644
--- a/src/de/lmu/ifi/dbs/elki/algorithm/outlier/spatial/neighborhood/NeighborSetPredicate.java
+++ b/src/de/lmu/ifi/dbs/elki/algorithm/outlier/spatial/neighborhood/NeighborSetPredicate.java
@@ -1,39 +1,41 @@
package de.lmu.ifi.dbs.elki.algorithm.outlier.spatial.neighborhood;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.data.type.TypeInformation;
import de.lmu.ifi.dbs.elki.database.ids.DBID;
import de.lmu.ifi.dbs.elki.database.ids.DBIDs;
import de.lmu.ifi.dbs.elki.database.relation.Relation;
+import de.lmu.ifi.dbs.elki.result.Result;
import de.lmu.ifi.dbs.elki.utilities.optionhandling.Parameterizable;
/**
* Predicate to obtain the neighbors of a reference object as set.
- *
+ *
* @author Erich Schubert
*/
-public interface NeighborSetPredicate {
+public interface NeighborSetPredicate extends Result {
/**
* Get the neighbors of a reference object for DBSCAN.
*
diff --git a/src/de/lmu/ifi/dbs/elki/algorithm/outlier/spatial/neighborhood/PrecomputedKNearestNeighborNeighborhood.java b/src/de/lmu/ifi/dbs/elki/algorithm/outlier/spatial/neighborhood/PrecomputedKNearestNeighborNeighborhood.java
index d820a318..fa878778 100644
--- a/src/de/lmu/ifi/dbs/elki/algorithm/outlier/spatial/neighborhood/PrecomputedKNearestNeighborNeighborhood.java
+++ b/src/de/lmu/ifi/dbs/elki/algorithm/outlier/spatial/neighborhood/PrecomputedKNearestNeighborNeighborhood.java
@@ -40,7 +40,6 @@ import de.lmu.ifi.dbs.elki.database.relation.Relation;
import de.lmu.ifi.dbs.elki.distance.distancefunction.DistanceFunction;
import de.lmu.ifi.dbs.elki.distance.distancevalue.Distance;
import de.lmu.ifi.dbs.elki.logging.Logging;
-import de.lmu.ifi.dbs.elki.result.Result;
import de.lmu.ifi.dbs.elki.utilities.optionhandling.AbstractParameterizer;
import de.lmu.ifi.dbs.elki.utilities.optionhandling.OptionID;
import de.lmu.ifi.dbs.elki.utilities.optionhandling.parameterization.Parameterization;
@@ -54,7 +53,7 @@ import de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters.ObjectParameter;
*
* @param <D> Distance to use
*/
-public class PrecomputedKNearestNeighborNeighborhood<D extends Distance<D>> extends AbstractPrecomputedNeighborhood implements Result {
+public class PrecomputedKNearestNeighborNeighborhood<D extends Distance<D>> extends AbstractPrecomputedNeighborhood {
/**
* Logger
*/
diff --git a/src/de/lmu/ifi/dbs/elki/algorithm/outlier/spatial/neighborhood/weighted/LinearWeightedExtendedNeighborhood.java b/src/de/lmu/ifi/dbs/elki/algorithm/outlier/spatial/neighborhood/weighted/LinearWeightedExtendedNeighborhood.java
index 1e1debdf..b2f70e16 100644
--- a/src/de/lmu/ifi/dbs/elki/algorithm/outlier/spatial/neighborhood/weighted/LinearWeightedExtendedNeighborhood.java
+++ b/src/de/lmu/ifi/dbs/elki/algorithm/outlier/spatial/neighborhood/weighted/LinearWeightedExtendedNeighborhood.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.algorithm.outlier.spatial.neighborhood.weighted;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.ArrayList;
import java.util.Collection;
diff --git a/src/de/lmu/ifi/dbs/elki/algorithm/outlier/spatial/neighborhood/weighted/UnweightedNeighborhoodAdapter.java b/src/de/lmu/ifi/dbs/elki/algorithm/outlier/spatial/neighborhood/weighted/UnweightedNeighborhoodAdapter.java
index 98daac11..0927c026 100644
--- a/src/de/lmu/ifi/dbs/elki/algorithm/outlier/spatial/neighborhood/weighted/UnweightedNeighborhoodAdapter.java
+++ b/src/de/lmu/ifi/dbs/elki/algorithm/outlier/spatial/neighborhood/weighted/UnweightedNeighborhoodAdapter.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.algorithm.outlier.spatial.neighborhood.weighted;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.ArrayList;
import java.util.Collection;
diff --git a/src/de/lmu/ifi/dbs/elki/algorithm/outlier/spatial/neighborhood/weighted/WeightedNeighborSetPredicate.java b/src/de/lmu/ifi/dbs/elki/algorithm/outlier/spatial/neighborhood/weighted/WeightedNeighborSetPredicate.java
index a063185a..d0cdfa9c 100644
--- a/src/de/lmu/ifi/dbs/elki/algorithm/outlier/spatial/neighborhood/weighted/WeightedNeighborSetPredicate.java
+++ b/src/de/lmu/ifi/dbs/elki/algorithm/outlier/spatial/neighborhood/weighted/WeightedNeighborSetPredicate.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.algorithm.outlier.spatial.neighborhood.weighted;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.Collection;
diff --git a/src/de/lmu/ifi/dbs/elki/algorithm/outlier/trivial/ByLabelOutlier.java b/src/de/lmu/ifi/dbs/elki/algorithm/outlier/trivial/ByLabelOutlier.java
index 80df18b1..3c9b318f 100644
--- a/src/de/lmu/ifi/dbs/elki/algorithm/outlier/trivial/ByLabelOutlier.java
+++ b/src/de/lmu/ifi/dbs/elki/algorithm/outlier/trivial/ByLabelOutlier.java
@@ -1,31 +1,33 @@
package de.lmu.ifi.dbs.elki.algorithm.outlier.trivial;
-/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.regex.Pattern;
import de.lmu.ifi.dbs.elki.algorithm.AbstractAlgorithm;
import de.lmu.ifi.dbs.elki.algorithm.outlier.OutlierAlgorithm;
+import de.lmu.ifi.dbs.elki.data.ClassLabel;
import de.lmu.ifi.dbs.elki.data.type.TypeInformation;
import de.lmu.ifi.dbs.elki.data.type.TypeUtil;
import de.lmu.ifi.dbs.elki.database.Database;
@@ -33,9 +35,9 @@ import de.lmu.ifi.dbs.elki.database.datastore.DataStoreFactory;
import de.lmu.ifi.dbs.elki.database.datastore.DataStoreUtil;
import de.lmu.ifi.dbs.elki.database.datastore.WritableDataStore;
import de.lmu.ifi.dbs.elki.database.ids.DBID;
+import de.lmu.ifi.dbs.elki.database.relation.MaterializedRelation;
import de.lmu.ifi.dbs.elki.database.relation.Relation;
import de.lmu.ifi.dbs.elki.logging.Logging;
-import de.lmu.ifi.dbs.elki.database.relation.MaterializedRelation;
import de.lmu.ifi.dbs.elki.result.outlier.OutlierResult;
import de.lmu.ifi.dbs.elki.result.outlier.OutlierScoreMeta;
import de.lmu.ifi.dbs.elki.result.outlier.ProbabilisticOutlierScore;
@@ -88,7 +90,24 @@ public class ByLabelOutlier extends AbstractAlgorithm<OutlierResult> implements
return TypeUtil.array(TypeUtil.GUESSED_LABEL);
}
- public OutlierResult run(@SuppressWarnings("unused") Database database, Relation<?> relation) throws IllegalStateException {
+ @Override
+ public OutlierResult run(Database database) {
+ // Prefer a true class label
+ Relation<ClassLabel> relation = database.getRelation(TypeUtil.CLASSLABEL);
+ if(relation != null) {
+ return run(relation);
+ }
+ // Otherwise, try any labellike.
+ return run(database.getRelation(getInputTypeRestriction()[0]));
+ }
+
+ /**
+ * Run the algorithm
+ *
+ * @param relation Relation to process.
+ * @return Result
+ */
+ public OutlierResult run(Relation<?> relation) {
WritableDataStore<Double> scores = DataStoreUtil.makeStorage(relation.getDBIDs(), DataStoreFactory.HINT_HOT, Double.class);
for(DBID id : relation.iterDBIDs()) {
String label = relation.get(id).toString();
diff --git a/src/de/lmu/ifi/dbs/elki/algorithm/outlier/trivial/TrivialAllOutlier.java b/src/de/lmu/ifi/dbs/elki/algorithm/outlier/trivial/TrivialAllOutlier.java
index 1ae37f6a..ff93e0ed 100644
--- a/src/de/lmu/ifi/dbs/elki/algorithm/outlier/trivial/TrivialAllOutlier.java
+++ b/src/de/lmu/ifi/dbs/elki/algorithm/outlier/trivial/TrivialAllOutlier.java
@@ -1,39 +1,39 @@
package de.lmu.ifi.dbs.elki.algorithm.outlier.trivial;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.algorithm.AbstractAlgorithm;
import de.lmu.ifi.dbs.elki.algorithm.outlier.OutlierAlgorithm;
import de.lmu.ifi.dbs.elki.data.type.TypeInformation;
import de.lmu.ifi.dbs.elki.data.type.TypeUtil;
-import de.lmu.ifi.dbs.elki.database.Database;
import de.lmu.ifi.dbs.elki.database.datastore.DataStoreFactory;
import de.lmu.ifi.dbs.elki.database.datastore.DataStoreUtil;
import de.lmu.ifi.dbs.elki.database.datastore.WritableDataStore;
import de.lmu.ifi.dbs.elki.database.ids.DBID;
+import de.lmu.ifi.dbs.elki.database.relation.MaterializedRelation;
import de.lmu.ifi.dbs.elki.database.relation.Relation;
import de.lmu.ifi.dbs.elki.logging.Logging;
-import de.lmu.ifi.dbs.elki.database.relation.MaterializedRelation;
import de.lmu.ifi.dbs.elki.result.outlier.OutlierResult;
import de.lmu.ifi.dbs.elki.result.outlier.OutlierScoreMeta;
import de.lmu.ifi.dbs.elki.result.outlier.ProbabilisticOutlierScore;
@@ -62,7 +62,13 @@ public class TrivialAllOutlier extends AbstractAlgorithm<OutlierResult> implemen
return TypeUtil.array(TypeUtil.ANY);
}
- public OutlierResult run(@SuppressWarnings("unused") Database database, Relation<?> relation) throws IllegalStateException {
+ /**
+ * Run the actual algorithm.
+ *
+ * @param relation Relation
+ * @return Result
+ */
+ public OutlierResult run(Relation<?> relation) {
WritableDataStore<Double> scores = DataStoreUtil.makeStorage(relation.getDBIDs(), DataStoreFactory.HINT_HOT, Double.class);
for(DBID id : relation.iterDBIDs()) {
scores.put(id, 1.0);
diff --git a/src/de/lmu/ifi/dbs/elki/algorithm/outlier/trivial/TrivialNoOutlier.java b/src/de/lmu/ifi/dbs/elki/algorithm/outlier/trivial/TrivialNoOutlier.java
index 18f63ea8..f3ae7e72 100644
--- a/src/de/lmu/ifi/dbs/elki/algorithm/outlier/trivial/TrivialNoOutlier.java
+++ b/src/de/lmu/ifi/dbs/elki/algorithm/outlier/trivial/TrivialNoOutlier.java
@@ -1,39 +1,39 @@
package de.lmu.ifi.dbs.elki.algorithm.outlier.trivial;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.algorithm.AbstractAlgorithm;
import de.lmu.ifi.dbs.elki.algorithm.outlier.OutlierAlgorithm;
import de.lmu.ifi.dbs.elki.data.type.TypeInformation;
import de.lmu.ifi.dbs.elki.data.type.TypeUtil;
-import de.lmu.ifi.dbs.elki.database.Database;
import de.lmu.ifi.dbs.elki.database.datastore.DataStoreFactory;
import de.lmu.ifi.dbs.elki.database.datastore.DataStoreUtil;
import de.lmu.ifi.dbs.elki.database.datastore.WritableDataStore;
import de.lmu.ifi.dbs.elki.database.ids.DBID;
+import de.lmu.ifi.dbs.elki.database.relation.MaterializedRelation;
import de.lmu.ifi.dbs.elki.database.relation.Relation;
import de.lmu.ifi.dbs.elki.logging.Logging;
-import de.lmu.ifi.dbs.elki.database.relation.MaterializedRelation;
import de.lmu.ifi.dbs.elki.result.outlier.OutlierResult;
import de.lmu.ifi.dbs.elki.result.outlier.OutlierScoreMeta;
import de.lmu.ifi.dbs.elki.result.outlier.ProbabilisticOutlierScore;
@@ -62,7 +62,13 @@ public class TrivialNoOutlier extends AbstractAlgorithm<OutlierResult> implement
return TypeUtil.array(TypeUtil.ANY);
}
- public OutlierResult run(@SuppressWarnings("unused") Database database, Relation<?> relation) throws IllegalStateException {
+ /**
+ * Run the actual algorithm.
+ *
+ * @param relation Relation
+ * @return Result
+ */
+ public OutlierResult run(Relation<?> relation) throws IllegalStateException {
WritableDataStore<Double> scores = DataStoreUtil.makeStorage(relation.getDBIDs(), DataStoreFactory.HINT_HOT, Double.class);
for(DBID id : relation.iterDBIDs()) {
scores.put(id, 0.0);
diff --git a/src/de/lmu/ifi/dbs/elki/algorithm/statistics/DistanceStatisticsWithClasses.java b/src/de/lmu/ifi/dbs/elki/algorithm/statistics/DistanceStatisticsWithClasses.java
index 97f6b9cd..33201b67 100644
--- a/src/de/lmu/ifi/dbs/elki/algorithm/statistics/DistanceStatisticsWithClasses.java
+++ b/src/de/lmu/ifi/dbs/elki/algorithm/statistics/DistanceStatisticsWithClasses.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.algorithm.statistics;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.ArrayList;
import java.util.Collection;
diff --git a/src/de/lmu/ifi/dbs/elki/algorithm/statistics/EvaluateRankingQuality.java b/src/de/lmu/ifi/dbs/elki/algorithm/statistics/EvaluateRankingQuality.java
index cbbe578e..58fb5b89 100644
--- a/src/de/lmu/ifi/dbs/elki/algorithm/statistics/EvaluateRankingQuality.java
+++ b/src/de/lmu/ifi/dbs/elki/algorithm/statistics/EvaluateRankingQuality.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.algorithm.statistics;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.ArrayList;
import java.util.Collection;
diff --git a/src/de/lmu/ifi/dbs/elki/algorithm/statistics/RankingQualityHistogram.java b/src/de/lmu/ifi/dbs/elki/algorithm/statistics/RankingQualityHistogram.java
index 5fdc2c9f..07e6795a 100644
--- a/src/de/lmu/ifi/dbs/elki/algorithm/statistics/RankingQualityHistogram.java
+++ b/src/de/lmu/ifi/dbs/elki/algorithm/statistics/RankingQualityHistogram.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.algorithm.statistics;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.ArrayList;
import java.util.Collection;
diff --git a/src/de/lmu/ifi/dbs/elki/application/AbstractApplication.java b/src/de/lmu/ifi/dbs/elki/application/AbstractApplication.java
index 4f0994cc..c2f19ef5 100644
--- a/src/de/lmu/ifi/dbs/elki/application/AbstractApplication.java
+++ b/src/de/lmu/ifi/dbs/elki/application/AbstractApplication.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.application;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.io.File;
import java.util.Collection;
diff --git a/src/de/lmu/ifi/dbs/elki/application/ComputeSingleColorHistogram.java b/src/de/lmu/ifi/dbs/elki/application/ComputeSingleColorHistogram.java
index 68e79b80..63fc5d63 100644
--- a/src/de/lmu/ifi/dbs/elki/application/ComputeSingleColorHistogram.java
+++ b/src/de/lmu/ifi/dbs/elki/application/ComputeSingleColorHistogram.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.application;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.io.File;
import java.io.IOException;
diff --git a/src/de/lmu/ifi/dbs/elki/application/GeneratorXMLSpec.java b/src/de/lmu/ifi/dbs/elki/application/GeneratorXMLSpec.java
index 7158f4b6..c09c74eb 100644
--- a/src/de/lmu/ifi/dbs/elki/application/GeneratorXMLSpec.java
+++ b/src/de/lmu/ifi/dbs/elki/application/GeneratorXMLSpec.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.application;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.io.File;
import java.io.FileInputStream;
diff --git a/src/de/lmu/ifi/dbs/elki/application/KDDCLIApplication.java b/src/de/lmu/ifi/dbs/elki/application/KDDCLIApplication.java
index b38d8fb8..59f75a7b 100644
--- a/src/de/lmu/ifi/dbs/elki/application/KDDCLIApplication.java
+++ b/src/de/lmu/ifi/dbs/elki/application/KDDCLIApplication.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.application;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.KDDTask;
import de.lmu.ifi.dbs.elki.algorithm.Algorithm;
diff --git a/src/de/lmu/ifi/dbs/elki/application/cache/CacheDoubleDistanceInOnDiskMatrix.java b/src/de/lmu/ifi/dbs/elki/application/cache/CacheDoubleDistanceInOnDiskMatrix.java
index ea8fa2d7..62080b51 100644
--- a/src/de/lmu/ifi/dbs/elki/application/cache/CacheDoubleDistanceInOnDiskMatrix.java
+++ b/src/de/lmu/ifi/dbs/elki/application/cache/CacheDoubleDistanceInOnDiskMatrix.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.application.cache;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.io.File;
import java.io.IOException;
diff --git a/src/de/lmu/ifi/dbs/elki/application/cache/CacheFloatDistanceInOnDiskMatrix.java b/src/de/lmu/ifi/dbs/elki/application/cache/CacheFloatDistanceInOnDiskMatrix.java
index 67fdcb9a..7c99779d 100644
--- a/src/de/lmu/ifi/dbs/elki/application/cache/CacheFloatDistanceInOnDiskMatrix.java
+++ b/src/de/lmu/ifi/dbs/elki/application/cache/CacheFloatDistanceInOnDiskMatrix.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.application.cache;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.io.File;
import java.io.IOException;
diff --git a/src/de/lmu/ifi/dbs/elki/application/internal/CheckELKIProperties.java b/src/de/lmu/ifi/dbs/elki/application/internal/CheckELKIProperties.java
index 858e9f35..fa260564 100644
--- a/src/de/lmu/ifi/dbs/elki/application/internal/CheckELKIProperties.java
+++ b/src/de/lmu/ifi/dbs/elki/application/internal/CheckELKIProperties.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.application.internal;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.ArrayList;
import java.util.Collections;
diff --git a/src/de/lmu/ifi/dbs/elki/application/internal/CheckParameterizables.java b/src/de/lmu/ifi/dbs/elki/application/internal/CheckParameterizables.java
index 740a8f26..017f2d12 100644
--- a/src/de/lmu/ifi/dbs/elki/application/internal/CheckParameterizables.java
+++ b/src/de/lmu/ifi/dbs/elki/application/internal/CheckParameterizables.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.application.internal;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.lang.reflect.Constructor;
import java.lang.reflect.Method;
diff --git a/src/de/lmu/ifi/dbs/elki/application/internal/DocumentParameters.java b/src/de/lmu/ifi/dbs/elki/application/internal/DocumentParameters.java
index e03d7efd..b5bb516e 100644
--- a/src/de/lmu/ifi/dbs/elki/application/internal/DocumentParameters.java
+++ b/src/de/lmu/ifi/dbs/elki/application/internal/DocumentParameters.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.application.internal;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.io.BufferedOutputStream;
import java.io.File;
diff --git a/src/de/lmu/ifi/dbs/elki/application/internal/DocumentReferences.java b/src/de/lmu/ifi/dbs/elki/application/internal/DocumentReferences.java
index 3a16ad7f..949a7874 100644
--- a/src/de/lmu/ifi/dbs/elki/application/internal/DocumentReferences.java
+++ b/src/de/lmu/ifi/dbs/elki/application/internal/DocumentReferences.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.application.internal;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.io.BufferedOutputStream;
import java.io.File;
diff --git a/src/de/lmu/ifi/dbs/elki/application/jsmap/JSONBuffer.java b/src/de/lmu/ifi/dbs/elki/application/jsmap/JSONBuffer.java
index f7ee8511..9ef3f688 100644
--- a/src/de/lmu/ifi/dbs/elki/application/jsmap/JSONBuffer.java
+++ b/src/de/lmu/ifi/dbs/elki/application/jsmap/JSONBuffer.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.application.jsmap;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.Stack;
diff --git a/src/de/lmu/ifi/dbs/elki/application/jsmap/JSONResultHandler.java b/src/de/lmu/ifi/dbs/elki/application/jsmap/JSONResultHandler.java
index 2d4cf7b9..96a24dcb 100644
--- a/src/de/lmu/ifi/dbs/elki/application/jsmap/JSONResultHandler.java
+++ b/src/de/lmu/ifi/dbs/elki/application/jsmap/JSONResultHandler.java
@@ -61,7 +61,7 @@ public class JSONResultHandler implements ResultHandler {
}
@Override
- public void processNewResult(HierarchicalResult baseResult, @SuppressWarnings("unused") Result newResult) {
+ public void processNewResult(HierarchicalResult baseResult, Result newResult) {
if(server == null) {
server = new JSONWebServer(port, baseResult);
}
diff --git a/src/de/lmu/ifi/dbs/elki/application/visualization/KNNExplorer.java b/src/de/lmu/ifi/dbs/elki/application/visualization/KNNExplorer.java
index bed2d163..0cb950af 100644
--- a/src/de/lmu/ifi/dbs/elki/application/visualization/KNNExplorer.java
+++ b/src/de/lmu/ifi/dbs/elki/application/visualization/KNNExplorer.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.application.visualization;
-/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.awt.BorderLayout;
import java.awt.Color;
@@ -33,6 +34,7 @@ import java.util.ListIterator;
import javax.swing.DefaultListCellRenderer;
import javax.swing.DefaultListModel;
+import javax.swing.ImageIcon;
import javax.swing.JButton;
import javax.swing.JFrame;
import javax.swing.JLabel;
@@ -50,6 +52,7 @@ import javax.swing.event.ListSelectionListener;
import org.apache.batik.util.SVGConstants;
import org.w3c.dom.Element;
+import de.lmu.ifi.dbs.elki.KDDTask;
import de.lmu.ifi.dbs.elki.application.AbstractApplication;
import de.lmu.ifi.dbs.elki.data.NumberVector;
import de.lmu.ifi.dbs.elki.data.VectorUtil;
@@ -263,6 +266,14 @@ public class KNNExplorer<O extends NumberVector<?, ?>, D extends NumberDistance<
frame.setDefaultCloseOperation(JFrame.DISPOSE_ON_CLOSE);
+ // ELKI icon
+ try {
+ frame.setIconImage(new ImageIcon(KDDTask.class.getResource("elki-icon.png")).getImage());
+ }
+ catch(Exception e) {
+ // Ignore - icon not found is not fatal.
+ }
+
// Create a panel and add the button, status label and the SVG canvas.
final JPanel bigpanel = new JPanel(new BorderLayout());
@@ -293,7 +304,7 @@ public class KNNExplorer<O extends NumberVector<?, ?>, D extends NumberDistance<
spinner.addChangeListener(new ChangeListener() {
@Override
- public void stateChanged(@SuppressWarnings("unused") ChangeEvent e) {
+ public void stateChanged(ChangeEvent e) {
updateK((Integer) (spinner.getValue()));
updateSelection();
}
@@ -310,14 +321,14 @@ public class KNNExplorer<O extends NumberVector<?, ?>, D extends NumberDistance<
saveButton.addActionListener(new ActionListener() {
@Override
- public void actionPerformed(@SuppressWarnings("unused") ActionEvent ae) {
+ public void actionPerformed(ActionEvent ae) {
SVGSaveDialog.showSaveDialog(plot, 512, 512);
}
});
quitButton.addActionListener(new ActionListener() {
@Override
- public void actionPerformed(@SuppressWarnings("unused") ActionEvent e) {
+ public void actionPerformed(ActionEvent e) {
frame.setVisible(false);
frame.dispose();
}
diff --git a/src/de/lmu/ifi/dbs/elki/data/AbstractNumberVector.java b/src/de/lmu/ifi/dbs/elki/data/AbstractNumberVector.java
index 2b339624..32d43d44 100644
--- a/src/de/lmu/ifi/dbs/elki/data/AbstractNumberVector.java
+++ b/src/de/lmu/ifi/dbs/elki/data/AbstractNumberVector.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.data;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
/**
* AbstractNumberVector is an abstract implementation of FeatureVector.
@@ -67,6 +68,11 @@ public abstract class AbstractNumberVector<V extends AbstractNumberVector<? exte
}
@Override
+ public int hashCode() {
+ return super.hashCode();
+ }
+
+ @Override
public double getMin(int dimension) {
return doubleValue(dimension);
}
diff --git a/src/de/lmu/ifi/dbs/elki/data/Arithmetic.java b/src/de/lmu/ifi/dbs/elki/data/Arithmetic.java
index 2ddb78b8..3a2959ca 100644
--- a/src/de/lmu/ifi/dbs/elki/data/Arithmetic.java
+++ b/src/de/lmu/ifi/dbs/elki/data/Arithmetic.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.data;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
/**
* An interface to define requirements for a number to perform arithmetic
diff --git a/src/de/lmu/ifi/dbs/elki/data/Bit.java b/src/de/lmu/ifi/dbs/elki/data/Bit.java
index cf51908e..3c77a4d5 100644
--- a/src/de/lmu/ifi/dbs/elki/data/Bit.java
+++ b/src/de/lmu/ifi/dbs/elki/data/Bit.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.data;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.regex.Pattern;
diff --git a/src/de/lmu/ifi/dbs/elki/data/BitVector.java b/src/de/lmu/ifi/dbs/elki/data/BitVector.java
index 69f4dbd8..b51ed4e3 100644
--- a/src/de/lmu/ifi/dbs/elki/data/BitVector.java
+++ b/src/de/lmu/ifi/dbs/elki/data/BitVector.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.data;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.io.IOException;
import java.nio.ByteBuffer;
diff --git a/src/de/lmu/ifi/dbs/elki/data/ClassLabel.java b/src/de/lmu/ifi/dbs/elki/data/ClassLabel.java
index f21afc55..7cef5e1e 100644
--- a/src/de/lmu/ifi/dbs/elki/data/ClassLabel.java
+++ b/src/de/lmu/ifi/dbs/elki/data/ClassLabel.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.data;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.utilities.InspectionUtilFrequentlyScanned;
diff --git a/src/de/lmu/ifi/dbs/elki/data/Cluster.java b/src/de/lmu/ifi/dbs/elki/data/Cluster.java
index cc84e134..7bc3fc30 100644
--- a/src/de/lmu/ifi/dbs/elki/data/Cluster.java
+++ b/src/de/lmu/ifi/dbs/elki/data/Cluster.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.data;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.ArrayList;
import java.util.Comparator;
diff --git a/src/de/lmu/ifi/dbs/elki/data/Clustering.java b/src/de/lmu/ifi/dbs/elki/data/Clustering.java
index 3a442c02..13203175 100644
--- a/src/de/lmu/ifi/dbs/elki/data/Clustering.java
+++ b/src/de/lmu/ifi/dbs/elki/data/Clustering.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.data;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.ArrayList;
import java.util.Collections;
diff --git a/src/de/lmu/ifi/dbs/elki/data/DoubleVector.java b/src/de/lmu/ifi/dbs/elki/data/DoubleVector.java
index 0afb3505..76405d60 100644
--- a/src/de/lmu/ifi/dbs/elki/data/DoubleVector.java
+++ b/src/de/lmu/ifi/dbs/elki/data/DoubleVector.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.data;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.io.IOException;
import java.nio.ByteBuffer;
diff --git a/src/de/lmu/ifi/dbs/elki/data/ExternalID.java b/src/de/lmu/ifi/dbs/elki/data/ExternalID.java
index 08d5ad5c..4ba44062 100644
--- a/src/de/lmu/ifi/dbs/elki/data/ExternalID.java
+++ b/src/de/lmu/ifi/dbs/elki/data/ExternalID.java
@@ -1,26 +1,28 @@
package de.lmu.ifi.dbs.elki.data;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
/**
* External ID objects.
diff --git a/src/de/lmu/ifi/dbs/elki/data/FeatureVector.java b/src/de/lmu/ifi/dbs/elki/data/FeatureVector.java
index fbffd12b..c4a0fa1d 100644
--- a/src/de/lmu/ifi/dbs/elki/data/FeatureVector.java
+++ b/src/de/lmu/ifi/dbs/elki/data/FeatureVector.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.data;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.List;
diff --git a/src/de/lmu/ifi/dbs/elki/data/FloatVector.java b/src/de/lmu/ifi/dbs/elki/data/FloatVector.java
index 206a1bd5..6943eb8a 100644
--- a/src/de/lmu/ifi/dbs/elki/data/FloatVector.java
+++ b/src/de/lmu/ifi/dbs/elki/data/FloatVector.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.data;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.io.IOException;
import java.nio.ByteBuffer;
diff --git a/src/de/lmu/ifi/dbs/elki/data/HierarchicalClassLabel.java b/src/de/lmu/ifi/dbs/elki/data/HierarchicalClassLabel.java
index 2bd6b219..694324c7 100644
--- a/src/de/lmu/ifi/dbs/elki/data/HierarchicalClassLabel.java
+++ b/src/de/lmu/ifi/dbs/elki/data/HierarchicalClassLabel.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.data;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.regex.Pattern;
diff --git a/src/de/lmu/ifi/dbs/elki/data/HyperBoundingBox.java b/src/de/lmu/ifi/dbs/elki/data/HyperBoundingBox.java
index 0d07f79f..3c4d50d6 100644
--- a/src/de/lmu/ifi/dbs/elki/data/HyperBoundingBox.java
+++ b/src/de/lmu/ifi/dbs/elki/data/HyperBoundingBox.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.data;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.io.Externalizable;
import java.io.IOException;
diff --git a/src/de/lmu/ifi/dbs/elki/data/IntegerVector.java b/src/de/lmu/ifi/dbs/elki/data/IntegerVector.java
index 2909c5a1..af6d7299 100644
--- a/src/de/lmu/ifi/dbs/elki/data/IntegerVector.java
+++ b/src/de/lmu/ifi/dbs/elki/data/IntegerVector.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.data;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.io.IOException;
import java.nio.ByteBuffer;
diff --git a/src/de/lmu/ifi/dbs/elki/data/Interval.java b/src/de/lmu/ifi/dbs/elki/data/Interval.java
index 1fc3daa2..87e1f1b9 100644
--- a/src/de/lmu/ifi/dbs/elki/data/Interval.java
+++ b/src/de/lmu/ifi/dbs/elki/data/Interval.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.data;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.utilities.FormatUtil;
diff --git a/src/de/lmu/ifi/dbs/elki/data/LabelList.java b/src/de/lmu/ifi/dbs/elki/data/LabelList.java
index 70fcb7d4..d710bf37 100644
--- a/src/de/lmu/ifi/dbs/elki/data/LabelList.java
+++ b/src/de/lmu/ifi/dbs/elki/data/LabelList.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.data;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.ArrayList;
diff --git a/src/de/lmu/ifi/dbs/elki/data/ModifiableHyperBoundingBox.java b/src/de/lmu/ifi/dbs/elki/data/ModifiableHyperBoundingBox.java
index 287de18e..3bb7610c 100644
--- a/src/de/lmu/ifi/dbs/elki/data/ModifiableHyperBoundingBox.java
+++ b/src/de/lmu/ifi/dbs/elki/data/ModifiableHyperBoundingBox.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.data;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.data.spatial.SpatialComparable;
import de.lmu.ifi.dbs.elki.data.spatial.SpatialUtil;
diff --git a/src/de/lmu/ifi/dbs/elki/data/NumberVector.java b/src/de/lmu/ifi/dbs/elki/data/NumberVector.java
index 0eeca395..409ea9b7 100644
--- a/src/de/lmu/ifi/dbs/elki/data/NumberVector.java
+++ b/src/de/lmu/ifi/dbs/elki/data/NumberVector.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.data;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.data.spatial.SpatialComparable;
import de.lmu.ifi.dbs.elki.math.linearalgebra.Matrix;
diff --git a/src/de/lmu/ifi/dbs/elki/data/OneDimensionalDoubleVector.java b/src/de/lmu/ifi/dbs/elki/data/OneDimensionalDoubleVector.java
index ac964227..d686e6b2 100644
--- a/src/de/lmu/ifi/dbs/elki/data/OneDimensionalDoubleVector.java
+++ b/src/de/lmu/ifi/dbs/elki/data/OneDimensionalDoubleVector.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.data;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.List;
diff --git a/src/de/lmu/ifi/dbs/elki/data/ParameterizationFunction.java b/src/de/lmu/ifi/dbs/elki/data/ParameterizationFunction.java
index eb2d8d16..b74c902d 100644
--- a/src/de/lmu/ifi/dbs/elki/data/ParameterizationFunction.java
+++ b/src/de/lmu/ifi/dbs/elki/data/ParameterizationFunction.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.data;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.List;
diff --git a/src/de/lmu/ifi/dbs/elki/data/RationalNumber.java b/src/de/lmu/ifi/dbs/elki/data/RationalNumber.java
index d248ea01..ac26b926 100644
--- a/src/de/lmu/ifi/dbs/elki/data/RationalNumber.java
+++ b/src/de/lmu/ifi/dbs/elki/data/RationalNumber.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.data;
-/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.io.File;
import java.io.FileNotFoundException;
@@ -360,6 +361,15 @@ public class RationalNumber extends Number implements Arithmetic<RationalNumber>
return denominator.equals(r.denominator) && numerator.equals(r.numerator);
}
+ @Override
+ public int hashCode() {
+ final int prime = 31;
+ int result = 1;
+ result = prime * result + ((denominator == null) ? 0 : denominator.hashCode());
+ result = prime * result + ((numerator == null) ? 0 : numerator.hashCode());
+ return result;
+ }
+
/**
* Returns a String representation of this RationalNumber.
* <p/>
diff --git a/src/de/lmu/ifi/dbs/elki/data/SimpleClassLabel.java b/src/de/lmu/ifi/dbs/elki/data/SimpleClassLabel.java
index dddcf4c4..da51aeaa 100644
--- a/src/de/lmu/ifi/dbs/elki/data/SimpleClassLabel.java
+++ b/src/de/lmu/ifi/dbs/elki/data/SimpleClassLabel.java
@@ -1,26 +1,28 @@
package de.lmu.ifi.dbs.elki.data;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
/**
* A simple class label casting a String as it is as label.
diff --git a/src/de/lmu/ifi/dbs/elki/data/SparseFeatureVector.java b/src/de/lmu/ifi/dbs/elki/data/SparseFeatureVector.java
index a3f4c282..aad17813 100644
--- a/src/de/lmu/ifi/dbs/elki/data/SparseFeatureVector.java
+++ b/src/de/lmu/ifi/dbs/elki/data/SparseFeatureVector.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.data;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.BitSet;
diff --git a/src/de/lmu/ifi/dbs/elki/data/SparseFloatVector.java b/src/de/lmu/ifi/dbs/elki/data/SparseFloatVector.java
index bd299c59..b9066d40 100644
--- a/src/de/lmu/ifi/dbs/elki/data/SparseFloatVector.java
+++ b/src/de/lmu/ifi/dbs/elki/data/SparseFloatVector.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.data;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.Arrays;
import java.util.BitSet;
diff --git a/src/de/lmu/ifi/dbs/elki/data/SparseNumberVector.java b/src/de/lmu/ifi/dbs/elki/data/SparseNumberVector.java
index 96b207ba..03038344 100644
--- a/src/de/lmu/ifi/dbs/elki/data/SparseNumberVector.java
+++ b/src/de/lmu/ifi/dbs/elki/data/SparseNumberVector.java
@@ -1,26 +1,28 @@
package de.lmu.ifi.dbs.elki.data;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
+
/**
diff --git a/src/de/lmu/ifi/dbs/elki/data/Subspace.java b/src/de/lmu/ifi/dbs/elki/data/Subspace.java
index 8b8d1abb..c0174fb2 100644
--- a/src/de/lmu/ifi/dbs/elki/data/Subspace.java
+++ b/src/de/lmu/ifi/dbs/elki/data/Subspace.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.data;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.BitSet;
import java.util.Comparator;
diff --git a/src/de/lmu/ifi/dbs/elki/data/VectorUtil.java b/src/de/lmu/ifi/dbs/elki/data/VectorUtil.java
index 46f94e24..159fd9a8 100644
--- a/src/de/lmu/ifi/dbs/elki/data/VectorUtil.java
+++ b/src/de/lmu/ifi/dbs/elki/data/VectorUtil.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.data;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.Random;
diff --git a/src/de/lmu/ifi/dbs/elki/data/images/AbstractComputeColorHistogram.java b/src/de/lmu/ifi/dbs/elki/data/images/AbstractComputeColorHistogram.java
index b3df292d..70d635d1 100644
--- a/src/de/lmu/ifi/dbs/elki/data/images/AbstractComputeColorHistogram.java
+++ b/src/de/lmu/ifi/dbs/elki/data/images/AbstractComputeColorHistogram.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.data.images;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.awt.image.BufferedImage;
import java.io.File;
diff --git a/src/de/lmu/ifi/dbs/elki/data/images/BlendComposite.java b/src/de/lmu/ifi/dbs/elki/data/images/BlendComposite.java
index 33c7f413..459a8698 100644
--- a/src/de/lmu/ifi/dbs/elki/data/images/BlendComposite.java
+++ b/src/de/lmu/ifi/dbs/elki/data/images/BlendComposite.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.data.images;
-/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.awt.Composite;
import java.awt.CompositeContext;
@@ -72,7 +73,7 @@ public class BlendComposite implements Composite {
* "Average" blending.
*/
public static final int AVERAGE = 6;
-
+
// TODO: Add the missing common blend modes:
// ADD, Color Burn, Color Dodge, Reflect, Glow, Difference, Negation
@@ -107,7 +108,7 @@ public class BlendComposite implements Composite {
}
@Override
- public CompositeContext createContext(ColorModel srcColorModel, ColorModel dstColorModel, @SuppressWarnings("unused") RenderingHints hints) {
+ public CompositeContext createContext(ColorModel srcColorModel, ColorModel dstColorModel, RenderingHints hints) {
switch(mode){
case NORMAL:
return new BlendingContext(srcColorModel, dstColorModel, alpha);
@@ -405,7 +406,7 @@ public class BlendComposite implements Composite {
return mixAlpha(a, r, g, b, dA, dR, dG, dB);
}
}
-
+
/**
* Blending context for an "average" blending.
*
diff --git a/src/de/lmu/ifi/dbs/elki/data/images/ComputeColorHistogram.java b/src/de/lmu/ifi/dbs/elki/data/images/ComputeColorHistogram.java
index 1efb1e5c..2c82c5bd 100644
--- a/src/de/lmu/ifi/dbs/elki/data/images/ComputeColorHistogram.java
+++ b/src/de/lmu/ifi/dbs/elki/data/images/ComputeColorHistogram.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.data.images;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.io.File;
import java.io.IOException;
diff --git a/src/de/lmu/ifi/dbs/elki/data/images/ComputeHSBColorHistogram.java b/src/de/lmu/ifi/dbs/elki/data/images/ComputeHSBColorHistogram.java
index 7de62e5a..bec59540 100644
--- a/src/de/lmu/ifi/dbs/elki/data/images/ComputeHSBColorHistogram.java
+++ b/src/de/lmu/ifi/dbs/elki/data/images/ComputeHSBColorHistogram.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.data.images;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.awt.Color;
import java.util.List;
diff --git a/src/de/lmu/ifi/dbs/elki/data/images/ComputeNaiveHSBColorHistogram.java b/src/de/lmu/ifi/dbs/elki/data/images/ComputeNaiveHSBColorHistogram.java
index 67b04eeb..ab912cff 100644
--- a/src/de/lmu/ifi/dbs/elki/data/images/ComputeNaiveHSBColorHistogram.java
+++ b/src/de/lmu/ifi/dbs/elki/data/images/ComputeNaiveHSBColorHistogram.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.data.images;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.utilities.optionhandling.AbstractParameterizer;
import de.lmu.ifi.dbs.elki.utilities.optionhandling.OptionID;
diff --git a/src/de/lmu/ifi/dbs/elki/data/images/ComputeNaiveRGBColorHistogram.java b/src/de/lmu/ifi/dbs/elki/data/images/ComputeNaiveRGBColorHistogram.java
index e81f93c9..2032bd62 100644
--- a/src/de/lmu/ifi/dbs/elki/data/images/ComputeNaiveRGBColorHistogram.java
+++ b/src/de/lmu/ifi/dbs/elki/data/images/ComputeNaiveRGBColorHistogram.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.data.images;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.utilities.optionhandling.AbstractParameterizer;
import de.lmu.ifi.dbs.elki.utilities.optionhandling.OptionID;
diff --git a/src/de/lmu/ifi/dbs/elki/data/images/ImageUtil.java b/src/de/lmu/ifi/dbs/elki/data/images/ImageUtil.java
index 7a7557c4..37079f96 100644
--- a/src/de/lmu/ifi/dbs/elki/data/images/ImageUtil.java
+++ b/src/de/lmu/ifi/dbs/elki/data/images/ImageUtil.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.data.images;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.awt.image.BufferedImage;
import java.io.File;
diff --git a/src/de/lmu/ifi/dbs/elki/data/model/BaseModel.java b/src/de/lmu/ifi/dbs/elki/data/model/BaseModel.java
index 6adb4e23..f7f69e07 100644
--- a/src/de/lmu/ifi/dbs/elki/data/model/BaseModel.java
+++ b/src/de/lmu/ifi/dbs/elki/data/model/BaseModel.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.data.model;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.result.textwriter.TextWriterStream;
diff --git a/src/de/lmu/ifi/dbs/elki/data/model/Bicluster.java b/src/de/lmu/ifi/dbs/elki/data/model/Bicluster.java
index 9b0a1533..f06b321f 100644
--- a/src/de/lmu/ifi/dbs/elki/data/model/Bicluster.java
+++ b/src/de/lmu/ifi/dbs/elki/data/model/Bicluster.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.data.model;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.Arrays;
import java.util.Collections;
diff --git a/src/de/lmu/ifi/dbs/elki/data/model/BiclusterWithInverted.java b/src/de/lmu/ifi/dbs/elki/data/model/BiclusterWithInverted.java
index 306dea33..1eb53b42 100644
--- a/src/de/lmu/ifi/dbs/elki/data/model/BiclusterWithInverted.java
+++ b/src/de/lmu/ifi/dbs/elki/data/model/BiclusterWithInverted.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.data.model;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.Collections;
@@ -63,7 +64,6 @@ public class BiclusterWithInverted<V extends FeatureVector<V, ?>> extends Biclus
*
* @deprecated Use DBIDs, not integer indexes!
*/
- @SuppressWarnings("deprecation")
@Deprecated
public BiclusterWithInverted(int[] rowIDs, int[] colIDs, Relation<V> database) {
super(rowIDs, colIDs, database);
diff --git a/src/de/lmu/ifi/dbs/elki/data/model/ClusterModel.java b/src/de/lmu/ifi/dbs/elki/data/model/ClusterModel.java
index 61e9abdf..c8b3e0eb 100644
--- a/src/de/lmu/ifi/dbs/elki/data/model/ClusterModel.java
+++ b/src/de/lmu/ifi/dbs/elki/data/model/ClusterModel.java
@@ -1,26 +1,28 @@
package de.lmu.ifi.dbs.elki.data.model;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
+
/**
* Generic cluster model. Does not supply additional meta information except that it is a cluster.
diff --git a/src/de/lmu/ifi/dbs/elki/data/model/CorrelationAnalysisSolution.java b/src/de/lmu/ifi/dbs/elki/data/model/CorrelationAnalysisSolution.java
index a0fc1bb7..2f8c2d15 100644
--- a/src/de/lmu/ifi/dbs/elki/data/model/CorrelationAnalysisSolution.java
+++ b/src/de/lmu/ifi/dbs/elki/data/model/CorrelationAnalysisSolution.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.data.model;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.text.NumberFormat;
import java.util.Locale;
diff --git a/src/de/lmu/ifi/dbs/elki/data/model/CorrelationModel.java b/src/de/lmu/ifi/dbs/elki/data/model/CorrelationModel.java
index f4dabe9a..0aa56478 100644
--- a/src/de/lmu/ifi/dbs/elki/data/model/CorrelationModel.java
+++ b/src/de/lmu/ifi/dbs/elki/data/model/CorrelationModel.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.data.model;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.data.FeatureVector;
import de.lmu.ifi.dbs.elki.math.linearalgebra.pca.PCAFilteredResult;
diff --git a/src/de/lmu/ifi/dbs/elki/data/model/DimensionModel.java b/src/de/lmu/ifi/dbs/elki/data/model/DimensionModel.java
index fe05e093..07857aa7 100644
--- a/src/de/lmu/ifi/dbs/elki/data/model/DimensionModel.java
+++ b/src/de/lmu/ifi/dbs/elki/data/model/DimensionModel.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.data.model;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.result.textwriter.TextWriteable;
import de.lmu.ifi.dbs.elki.result.textwriter.TextWriterStream;
diff --git a/src/de/lmu/ifi/dbs/elki/data/model/EMModel.java b/src/de/lmu/ifi/dbs/elki/data/model/EMModel.java
index f8a06d31..62c5c2a5 100644
--- a/src/de/lmu/ifi/dbs/elki/data/model/EMModel.java
+++ b/src/de/lmu/ifi/dbs/elki/data/model/EMModel.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.data.model;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.data.FeatureVector;
import de.lmu.ifi.dbs.elki.math.linearalgebra.Matrix;
diff --git a/src/de/lmu/ifi/dbs/elki/data/model/LinearEquationModel.java b/src/de/lmu/ifi/dbs/elki/data/model/LinearEquationModel.java
index 849bcf63..3716ffa7 100644
--- a/src/de/lmu/ifi/dbs/elki/data/model/LinearEquationModel.java
+++ b/src/de/lmu/ifi/dbs/elki/data/model/LinearEquationModel.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.data.model;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.math.linearalgebra.LinearEquationSystem;
import de.lmu.ifi.dbs.elki.result.textwriter.TextWriteable;
diff --git a/src/de/lmu/ifi/dbs/elki/data/model/MeanModel.java b/src/de/lmu/ifi/dbs/elki/data/model/MeanModel.java
index e2ee447f..b9747f75 100644
--- a/src/de/lmu/ifi/dbs/elki/data/model/MeanModel.java
+++ b/src/de/lmu/ifi/dbs/elki/data/model/MeanModel.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.data.model;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.data.FeatureVector;
import de.lmu.ifi.dbs.elki.result.textwriter.TextWriteable;
diff --git a/src/de/lmu/ifi/dbs/elki/data/model/Model.java b/src/de/lmu/ifi/dbs/elki/data/model/Model.java
index 89005ce4..58e9542b 100644
--- a/src/de/lmu/ifi/dbs/elki/data/model/Model.java
+++ b/src/de/lmu/ifi/dbs/elki/data/model/Model.java
@@ -1,26 +1,28 @@
package de.lmu.ifi.dbs.elki.data.model;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
/**
* Base interface for Model classes.
diff --git a/src/de/lmu/ifi/dbs/elki/data/model/OPTICSModel.java b/src/de/lmu/ifi/dbs/elki/data/model/OPTICSModel.java
index 40368e74..eecf5e7a 100644
--- a/src/de/lmu/ifi/dbs/elki/data/model/OPTICSModel.java
+++ b/src/de/lmu/ifi/dbs/elki/data/model/OPTICSModel.java
@@ -1,26 +1,28 @@
package de.lmu.ifi.dbs.elki.data.model;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
/**
* Model for an OPTICS cluster
diff --git a/src/de/lmu/ifi/dbs/elki/data/model/SubspaceModel.java b/src/de/lmu/ifi/dbs/elki/data/model/SubspaceModel.java
index c62568a0..ccaff24f 100644
--- a/src/de/lmu/ifi/dbs/elki/data/model/SubspaceModel.java
+++ b/src/de/lmu/ifi/dbs/elki/data/model/SubspaceModel.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.data.model;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.BitSet;
diff --git a/src/de/lmu/ifi/dbs/elki/data/spatial/Polygon.java b/src/de/lmu/ifi/dbs/elki/data/spatial/Polygon.java
index aeb152f2..aa16c12e 100644
--- a/src/de/lmu/ifi/dbs/elki/data/spatial/Polygon.java
+++ b/src/de/lmu/ifi/dbs/elki/data/spatial/Polygon.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.data.spatial;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.Iterator;
import java.util.List;
diff --git a/src/de/lmu/ifi/dbs/elki/data/spatial/PolygonsObject.java b/src/de/lmu/ifi/dbs/elki/data/spatial/PolygonsObject.java
index 536c5bd1..d5d11c8d 100644
--- a/src/de/lmu/ifi/dbs/elki/data/spatial/PolygonsObject.java
+++ b/src/de/lmu/ifi/dbs/elki/data/spatial/PolygonsObject.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.data.spatial;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.Collection;
import java.util.Collections;
diff --git a/src/de/lmu/ifi/dbs/elki/data/spatial/SpatialComparable.java b/src/de/lmu/ifi/dbs/elki/data/spatial/SpatialComparable.java
index 7ae70e36..dc82a05b 100644
--- a/src/de/lmu/ifi/dbs/elki/data/spatial/SpatialComparable.java
+++ b/src/de/lmu/ifi/dbs/elki/data/spatial/SpatialComparable.java
@@ -1,26 +1,28 @@
package de.lmu.ifi.dbs.elki.data.spatial;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
+
/**
diff --git a/src/de/lmu/ifi/dbs/elki/data/spatial/SpatialUtil.java b/src/de/lmu/ifi/dbs/elki/data/spatial/SpatialUtil.java
index b0bde3b1..f3bd030f 100644
--- a/src/de/lmu/ifi/dbs/elki/data/spatial/SpatialUtil.java
+++ b/src/de/lmu/ifi/dbs/elki/data/spatial/SpatialUtil.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.data.spatial;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.data.HyperBoundingBox;
diff --git a/src/de/lmu/ifi/dbs/elki/data/synthetic/bymodel/GeneratorInterface.java b/src/de/lmu/ifi/dbs/elki/data/synthetic/bymodel/GeneratorInterface.java
index 3b97c87f..3c5853ed 100644
--- a/src/de/lmu/ifi/dbs/elki/data/synthetic/bymodel/GeneratorInterface.java
+++ b/src/de/lmu/ifi/dbs/elki/data/synthetic/bymodel/GeneratorInterface.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.data.synthetic.bymodel;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.List;
diff --git a/src/de/lmu/ifi/dbs/elki/data/synthetic/bymodel/GeneratorInterfaceDynamic.java b/src/de/lmu/ifi/dbs/elki/data/synthetic/bymodel/GeneratorInterfaceDynamic.java
index f006fc60..240cda31 100644
--- a/src/de/lmu/ifi/dbs/elki/data/synthetic/bymodel/GeneratorInterfaceDynamic.java
+++ b/src/de/lmu/ifi/dbs/elki/data/synthetic/bymodel/GeneratorInterfaceDynamic.java
@@ -1,26 +1,28 @@
package de.lmu.ifi.dbs.elki.data.synthetic.bymodel;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
+
/**
* Interface for a dynamic cluster generator.
diff --git a/src/de/lmu/ifi/dbs/elki/data/synthetic/bymodel/GeneratorMain.java b/src/de/lmu/ifi/dbs/elki/data/synthetic/bymodel/GeneratorMain.java
index 34b5d993..6400a747 100644
--- a/src/de/lmu/ifi/dbs/elki/data/synthetic/bymodel/GeneratorMain.java
+++ b/src/de/lmu/ifi/dbs/elki/data/synthetic/bymodel/GeneratorMain.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.data.synthetic.bymodel;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.io.IOException;
import java.io.OutputStreamWriter;
diff --git a/src/de/lmu/ifi/dbs/elki/data/synthetic/bymodel/GeneratorSingleCluster.java b/src/de/lmu/ifi/dbs/elki/data/synthetic/bymodel/GeneratorSingleCluster.java
index 65e27a20..3d54d937 100644
--- a/src/de/lmu/ifi/dbs/elki/data/synthetic/bymodel/GeneratorSingleCluster.java
+++ b/src/de/lmu/ifi/dbs/elki/data/synthetic/bymodel/GeneratorSingleCluster.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.data.synthetic.bymodel;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.LinkedList;
import java.util.Random;
diff --git a/src/de/lmu/ifi/dbs/elki/data/synthetic/bymodel/GeneratorStatic.java b/src/de/lmu/ifi/dbs/elki/data/synthetic/bymodel/GeneratorStatic.java
index 528e931c..6c44eaca 100644
--- a/src/de/lmu/ifi/dbs/elki/data/synthetic/bymodel/GeneratorStatic.java
+++ b/src/de/lmu/ifi/dbs/elki/data/synthetic/bymodel/GeneratorStatic.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.data.synthetic.bymodel;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.ArrayList;
import java.util.LinkedList;
diff --git a/src/de/lmu/ifi/dbs/elki/data/synthetic/bymodel/distribution/Distribution.java b/src/de/lmu/ifi/dbs/elki/data/synthetic/bymodel/distribution/Distribution.java
index 93466c4b..f93a6459 100644
--- a/src/de/lmu/ifi/dbs/elki/data/synthetic/bymodel/distribution/Distribution.java
+++ b/src/de/lmu/ifi/dbs/elki/data/synthetic/bymodel/distribution/Distribution.java
@@ -1,26 +1,28 @@
package de.lmu.ifi.dbs.elki.data.synthetic.bymodel.distribution;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
/**
* Interface for a simple distribution generator
diff --git a/src/de/lmu/ifi/dbs/elki/data/synthetic/bymodel/distribution/GammaDistribution.java b/src/de/lmu/ifi/dbs/elki/data/synthetic/bymodel/distribution/GammaDistribution.java
index 0aaf6497..156ac3c4 100644
--- a/src/de/lmu/ifi/dbs/elki/data/synthetic/bymodel/distribution/GammaDistribution.java
+++ b/src/de/lmu/ifi/dbs/elki/data/synthetic/bymodel/distribution/GammaDistribution.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.data.synthetic.bymodel.distribution;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.Random;
diff --git a/src/de/lmu/ifi/dbs/elki/data/synthetic/bymodel/distribution/NormalDistribution.java b/src/de/lmu/ifi/dbs/elki/data/synthetic/bymodel/distribution/NormalDistribution.java
index 1f0909ce..24f06f32 100644
--- a/src/de/lmu/ifi/dbs/elki/data/synthetic/bymodel/distribution/NormalDistribution.java
+++ b/src/de/lmu/ifi/dbs/elki/data/synthetic/bymodel/distribution/NormalDistribution.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.data.synthetic.bymodel.distribution;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.Random;
diff --git a/src/de/lmu/ifi/dbs/elki/data/synthetic/bymodel/distribution/UniformDistribution.java b/src/de/lmu/ifi/dbs/elki/data/synthetic/bymodel/distribution/UniformDistribution.java
index 38d6fcff..0686f1a3 100644
--- a/src/de/lmu/ifi/dbs/elki/data/synthetic/bymodel/distribution/UniformDistribution.java
+++ b/src/de/lmu/ifi/dbs/elki/data/synthetic/bymodel/distribution/UniformDistribution.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.data.synthetic.bymodel.distribution;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.Random;
diff --git a/src/de/lmu/ifi/dbs/elki/data/type/AlternativeTypeInformation.java b/src/de/lmu/ifi/dbs/elki/data/type/AlternativeTypeInformation.java
index 6ed1b642..3d37c680 100644
--- a/src/de/lmu/ifi/dbs/elki/data/type/AlternativeTypeInformation.java
+++ b/src/de/lmu/ifi/dbs/elki/data/type/AlternativeTypeInformation.java
@@ -1,26 +1,28 @@
package de.lmu.ifi.dbs.elki.data.type;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
/**
diff --git a/src/de/lmu/ifi/dbs/elki/data/type/CombinedTypeInformation.java b/src/de/lmu/ifi/dbs/elki/data/type/CombinedTypeInformation.java
index 26a3c7f7..02a549f6 100644
--- a/src/de/lmu/ifi/dbs/elki/data/type/CombinedTypeInformation.java
+++ b/src/de/lmu/ifi/dbs/elki/data/type/CombinedTypeInformation.java
@@ -1,26 +1,28 @@
package de.lmu.ifi.dbs.elki.data.type;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
/**
* Class that combines multiple type restrictions into one using an "and" operator.
diff --git a/src/de/lmu/ifi/dbs/elki/data/type/NoSupportedDataTypeException.java b/src/de/lmu/ifi/dbs/elki/data/type/NoSupportedDataTypeException.java
index afcca482..3bfef34f 100644
--- a/src/de/lmu/ifi/dbs/elki/data/type/NoSupportedDataTypeException.java
+++ b/src/de/lmu/ifi/dbs/elki/data/type/NoSupportedDataTypeException.java
@@ -1,26 +1,28 @@
package de.lmu.ifi.dbs.elki.data.type;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
+
/**
* Exception thrown when no supported data type was found.
diff --git a/src/de/lmu/ifi/dbs/elki/data/type/SimpleTypeInformation.java b/src/de/lmu/ifi/dbs/elki/data/type/SimpleTypeInformation.java
index cf381780..c169906e 100644
--- a/src/de/lmu/ifi/dbs/elki/data/type/SimpleTypeInformation.java
+++ b/src/de/lmu/ifi/dbs/elki/data/type/SimpleTypeInformation.java
@@ -1,26 +1,28 @@
package de.lmu.ifi.dbs.elki.data.type;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
/**
* Class wrapping a particular data type.
@@ -34,6 +36,11 @@ public class SimpleTypeInformation<T> implements TypeInformation {
* The restriction class we represent.
*/
private Class<? super T> cls;
+
+ /**
+ * Type label
+ */
+ private String label = null;
/**
* Constructor.
@@ -46,6 +53,18 @@ public class SimpleTypeInformation<T> implements TypeInformation {
}
/**
+ * Constructor.
+ *
+ * @param cls restriction class
+ * @param label type label
+ */
+ public SimpleTypeInformation(Class<? super T> cls, String label) {
+ super();
+ this.cls = cls;
+ this.label = label;
+ }
+
+ /**
* Get the raw restriction class.
*
* @return Restriction class
@@ -79,20 +98,17 @@ public class SimpleTypeInformation<T> implements TypeInformation {
return (T) cls.cast(other);
}
- /**
- * Pseudo constructor that is often convenient to use when T is not completely
- * known.
- *
- * @param <T> Type
- * @param cls Class restriction
- * @return Type
- */
- public static <T> SimpleTypeInformation<T> get(Class<T> cls) {
- return new SimpleTypeInformation<T>(cls);
- }
-
@Override
public String toString() {
return getRestrictionClass().getSimpleName();
}
+
+ /**
+ * Get the type label
+ *
+ * @return Label
+ */
+ public String getLabel() {
+ return label;
+ }
} \ No newline at end of file
diff --git a/src/de/lmu/ifi/dbs/elki/data/type/TypeInformation.java b/src/de/lmu/ifi/dbs/elki/data/type/TypeInformation.java
index e077d0a7..b871f2a7 100644
--- a/src/de/lmu/ifi/dbs/elki/data/type/TypeInformation.java
+++ b/src/de/lmu/ifi/dbs/elki/data/type/TypeInformation.java
@@ -1,26 +1,28 @@
package de.lmu.ifi.dbs.elki.data.type;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
+
/**
* Class wrapping a particular data type.
diff --git a/src/de/lmu/ifi/dbs/elki/data/type/TypeUtil.java b/src/de/lmu/ifi/dbs/elki/data/type/TypeUtil.java
index c65d04c9..7abad242 100644
--- a/src/de/lmu/ifi/dbs/elki/data/type/TypeUtil.java
+++ b/src/de/lmu/ifi/dbs/elki/data/type/TypeUtil.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.data.type;
-/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.data.BitVector;
import de.lmu.ifi.dbs.elki.data.ClassLabel;
@@ -31,6 +32,8 @@ import de.lmu.ifi.dbs.elki.data.NumberVector;
import de.lmu.ifi.dbs.elki.data.SparseFloatVector;
import de.lmu.ifi.dbs.elki.data.spatial.PolygonsObject;
import de.lmu.ifi.dbs.elki.database.ids.DBID;
+import de.lmu.ifi.dbs.elki.math.linearalgebra.Matrix;
+import de.lmu.ifi.dbs.elki.math.linearalgebra.Vector;
/**
* Utility package containing various common types
@@ -98,22 +101,32 @@ public final class TypeUtil {
/**
* External ID type
*/
- public static final SimpleTypeInformation<ExternalID> EXTERNALID = SimpleTypeInformation.get(ExternalID.class);
+ public static final SimpleTypeInformation<ExternalID> EXTERNALID = new SimpleTypeInformation<ExternalID>(ExternalID.class);
/**
* Type for polygons
*/
- public static final SimpleTypeInformation<PolygonsObject> POLYGON_TYPE = SimpleTypeInformation.get(PolygonsObject.class);
+ public static final SimpleTypeInformation<PolygonsObject> POLYGON_TYPE = new SimpleTypeInformation<PolygonsObject>(PolygonsObject.class);
/**
* Double type, outlier scores etc.
*/
- public static final SimpleTypeInformation<Double> DOUBLE = SimpleTypeInformation.get(Double.class);
+ public static final SimpleTypeInformation<Double> DOUBLE = new SimpleTypeInformation<Double>(Double.class);
/**
* Integer type.
*/
- public static final SimpleTypeInformation<Integer> INTEGER = SimpleTypeInformation.get(Integer.class);
+ public static final SimpleTypeInformation<Integer> INTEGER = new SimpleTypeInformation<Integer>(Integer.class);
+
+ /**
+ * Vector type.
+ */
+ public static final SimpleTypeInformation<Vector> VECTOR = new SimpleTypeInformation<Vector>(Vector.class);
+
+ /**
+ * Matrix type.
+ */
+ public static final SimpleTypeInformation<Matrix> MATRIX = new SimpleTypeInformation<Matrix>(Matrix.class);
/**
* Make a type array easily.
diff --git a/src/de/lmu/ifi/dbs/elki/data/type/VectorFieldTypeInformation.java b/src/de/lmu/ifi/dbs/elki/data/type/VectorFieldTypeInformation.java
index 43bc149f..99bed220 100644
--- a/src/de/lmu/ifi/dbs/elki/data/type/VectorFieldTypeInformation.java
+++ b/src/de/lmu/ifi/dbs/elki/data/type/VectorFieldTypeInformation.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.data.type;
-/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.data.FeatureVector;
@@ -38,6 +39,11 @@ public class VectorFieldTypeInformation<V extends FeatureVector<?, ?>> extends V
private final V factory;
/**
+ * Labels
+ */
+ private String[] labels = null;
+
+ /**
* Constructor for a request without fixed dimensionality.
*
* @param cls Vector restriction class.
@@ -82,6 +88,21 @@ public class VectorFieldTypeInformation<V extends FeatureVector<?, ?>> extends V
this.factory = factory;
}
+ /**
+ * Constructor with given dimensionality and factory, so usually an instance.
+ *
+ * @param cls Restriction java class
+ * @param dim Dimensionality
+ * @param labels Labels
+ * @param factory Factory class
+ */
+ public VectorFieldTypeInformation(Class<? super V> cls, int dim, String[] labels, V factory) {
+ super(cls, dim, dim);
+ this.labels = labels;
+ this.factory = factory;
+ assert (labels == null || labels.length == dim) : "Created vector field with incomplete labels.";
+ }
+
@Override
public boolean isAssignableFromType(TypeInformation type) {
// Do all checks from superclass
@@ -154,4 +175,17 @@ public class VectorFieldTypeInformation<V extends FeatureVector<?, ?>> extends V
return super.toString();
}
}
+
+ /**
+ * Get the column label
+ *
+ * @param col Column number
+ * @return Label
+ */
+ public String getLabel(int col) {
+ if(labels == null) {
+ return null;
+ }
+ return labels[col - 1];
+ }
} \ No newline at end of file
diff --git a/src/de/lmu/ifi/dbs/elki/data/type/VectorTypeInformation.java b/src/de/lmu/ifi/dbs/elki/data/type/VectorTypeInformation.java
index 67aa2a83..a529ce7b 100644
--- a/src/de/lmu/ifi/dbs/elki/data/type/VectorTypeInformation.java
+++ b/src/de/lmu/ifi/dbs/elki/data/type/VectorTypeInformation.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.data.type;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.data.FeatureVector;
diff --git a/src/de/lmu/ifi/dbs/elki/database/AbstractDatabase.java b/src/de/lmu/ifi/dbs/elki/database/AbstractDatabase.java
index 1acca36f..f20efcec 100644
--- a/src/de/lmu/ifi/dbs/elki/database/AbstractDatabase.java
+++ b/src/de/lmu/ifi/dbs/elki/database/AbstractDatabase.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.database;
-/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.Collection;
import java.util.Collections;
@@ -141,7 +142,7 @@ public abstract class AbstractDatabase extends AbstractHierarchicalResult implem
return Collections.unmodifiableCollection(relations);
}
- @SuppressWarnings({ "unchecked", "unused" })
+ @SuppressWarnings({ "unchecked" })
@Override
public <O> Relation<O> getRelation(TypeInformation restriction, Object... hints) throws NoSupportedDataTypeException {
// Get first match
@@ -153,7 +154,6 @@ public abstract class AbstractDatabase extends AbstractHierarchicalResult implem
throw new NoSupportedDataTypeException(restriction);
}
- @SuppressWarnings("unused")
@Override
public <O, D extends Distance<D>> DistanceQuery<O, D> getDistanceQuery(Relation<O> objQuery, DistanceFunction<? super O, D> distanceFunction, Object... hints) {
if(distanceFunction == null) {
@@ -162,7 +162,6 @@ public abstract class AbstractDatabase extends AbstractHierarchicalResult implem
return distanceFunction.instantiate(objQuery);
}
- @SuppressWarnings("unused")
@Override
public <O, D extends Distance<D>> SimilarityQuery<O, D> getSimilarityQuery(Relation<O> objQuery, SimilarityFunction<? super O, D> similarityFunction, Object... hints) {
if(similarityFunction == null) {
diff --git a/src/de/lmu/ifi/dbs/elki/database/Database.java b/src/de/lmu/ifi/dbs/elki/database/Database.java
index cc73d5b2..1b216fd0 100644
--- a/src/de/lmu/ifi/dbs/elki/database/Database.java
+++ b/src/de/lmu/ifi/dbs/elki/database/Database.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.database;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.Collection;
diff --git a/src/de/lmu/ifi/dbs/elki/database/HashmapDatabase.java b/src/de/lmu/ifi/dbs/elki/database/HashmapDatabase.java
index 1ca03dab..a4c31379 100644
--- a/src/de/lmu/ifi/dbs/elki/database/HashmapDatabase.java
+++ b/src/de/lmu/ifi/dbs/elki/database/HashmapDatabase.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.database;
-/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.ArrayList;
import java.util.BitSet;
@@ -283,14 +284,12 @@ public class HashmapDatabase extends AbstractDatabase implements UpdatableDataba
restoreID(id);
}
- @SuppressWarnings("deprecation")
@Deprecated
@Override
public final int size() {
return ids.size();
}
- @SuppressWarnings("deprecation")
@Deprecated
@Override
public StaticDBIDs getDBIDs() {
diff --git a/src/de/lmu/ifi/dbs/elki/database/ProxyDatabase.java b/src/de/lmu/ifi/dbs/elki/database/ProxyDatabase.java
index 01d552cb..4fc2455c 100644
--- a/src/de/lmu/ifi/dbs/elki/database/ProxyDatabase.java
+++ b/src/de/lmu/ifi/dbs/elki/database/ProxyDatabase.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.database;
-/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.Arrays;
@@ -119,14 +120,12 @@ public class ProxyDatabase extends AbstractDatabase {
this.relations.add(relation);
}
- @SuppressWarnings("deprecation")
@Deprecated
@Override
public int size() {
return ids.size();
}
- @SuppressWarnings("deprecation")
@Deprecated
@Override
public StaticDBIDs getDBIDs() {
diff --git a/src/de/lmu/ifi/dbs/elki/database/QueryUtil.java b/src/de/lmu/ifi/dbs/elki/database/QueryUtil.java
index 320a27ec..9e335f51 100644
--- a/src/de/lmu/ifi/dbs/elki/database/QueryUtil.java
+++ b/src/de/lmu/ifi/dbs/elki/database/QueryUtil.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.database;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.database.query.distance.DistanceQuery;
import de.lmu.ifi.dbs.elki.database.query.distance.PrimitiveDistanceQuery;
diff --git a/src/de/lmu/ifi/dbs/elki/database/StaticArrayDatabase.java b/src/de/lmu/ifi/dbs/elki/database/StaticArrayDatabase.java
index bfa8161c..4679cc52 100644
--- a/src/de/lmu/ifi/dbs/elki/database/StaticArrayDatabase.java
+++ b/src/de/lmu/ifi/dbs/elki/database/StaticArrayDatabase.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.database;
-/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.BitSet;
import java.util.Collection;
@@ -261,14 +262,12 @@ public class StaticArrayDatabase extends AbstractDatabase implements Database, P
return relation;
}
- @SuppressWarnings("deprecation")
@Deprecated
@Override
public final int size() {
return ids.size();
}
- @SuppressWarnings("deprecation")
@Deprecated
@Override
public StaticDBIDs getDBIDs() {
diff --git a/src/de/lmu/ifi/dbs/elki/database/UpdatableDatabase.java b/src/de/lmu/ifi/dbs/elki/database/UpdatableDatabase.java
index eb1a8df7..b74ebc1d 100644
--- a/src/de/lmu/ifi/dbs/elki/database/UpdatableDatabase.java
+++ b/src/de/lmu/ifi/dbs/elki/database/UpdatableDatabase.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.database;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.database.ids.DBIDs;
import de.lmu.ifi.dbs.elki.datasource.bundle.ObjectBundle;
diff --git a/src/de/lmu/ifi/dbs/elki/database/datastore/DataStore.java b/src/de/lmu/ifi/dbs/elki/database/datastore/DataStore.java
index b1f1e092..1b0a714c 100644
--- a/src/de/lmu/ifi/dbs/elki/database/datastore/DataStore.java
+++ b/src/de/lmu/ifi/dbs/elki/database/datastore/DataStore.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.database.datastore;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.database.ids.DBID;
import de.lmu.ifi.dbs.elki.result.Result;
diff --git a/src/de/lmu/ifi/dbs/elki/database/datastore/DataStoreFactory.java b/src/de/lmu/ifi/dbs/elki/database/datastore/DataStoreFactory.java
index f9acff27..d83c9a1c 100644
--- a/src/de/lmu/ifi/dbs/elki/database/datastore/DataStoreFactory.java
+++ b/src/de/lmu/ifi/dbs/elki/database/datastore/DataStoreFactory.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.database.datastore;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.database.datastore.memory.MemoryDataStoreFactory;
import de.lmu.ifi.dbs.elki.database.ids.DBIDs;
diff --git a/src/de/lmu/ifi/dbs/elki/database/datastore/DataStoreIDMap.java b/src/de/lmu/ifi/dbs/elki/database/datastore/DataStoreIDMap.java
index f8ac6d07..21b876ce 100644
--- a/src/de/lmu/ifi/dbs/elki/database/datastore/DataStoreIDMap.java
+++ b/src/de/lmu/ifi/dbs/elki/database/datastore/DataStoreIDMap.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.database.datastore;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.database.ids.DBID;
diff --git a/src/de/lmu/ifi/dbs/elki/database/datastore/DataStoreListener.java b/src/de/lmu/ifi/dbs/elki/database/datastore/DataStoreListener.java
index b2f229b7..02d5db77 100644
--- a/src/de/lmu/ifi/dbs/elki/database/datastore/DataStoreListener.java
+++ b/src/de/lmu/ifi/dbs/elki/database/datastore/DataStoreListener.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.database.datastore;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.EventListener;
diff --git a/src/de/lmu/ifi/dbs/elki/database/datastore/DataStoreUtil.java b/src/de/lmu/ifi/dbs/elki/database/datastore/DataStoreUtil.java
index 20628c12..6e7af03d 100644
--- a/src/de/lmu/ifi/dbs/elki/database/datastore/DataStoreUtil.java
+++ b/src/de/lmu/ifi/dbs/elki/database/datastore/DataStoreUtil.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.database.datastore;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.database.ids.DBIDs;
diff --git a/src/de/lmu/ifi/dbs/elki/database/datastore/RangeIDMap.java b/src/de/lmu/ifi/dbs/elki/database/datastore/RangeIDMap.java
index cc6465a6..85a0f4c4 100644
--- a/src/de/lmu/ifi/dbs/elki/database/datastore/RangeIDMap.java
+++ b/src/de/lmu/ifi/dbs/elki/database/datastore/RangeIDMap.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.database.datastore;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.database.ids.DBID;
import de.lmu.ifi.dbs.elki.database.ids.DBIDRange;
diff --git a/src/de/lmu/ifi/dbs/elki/database/datastore/RecordStore.java b/src/de/lmu/ifi/dbs/elki/database/datastore/RecordStore.java
index c010168f..31bbbc3b 100644
--- a/src/de/lmu/ifi/dbs/elki/database/datastore/RecordStore.java
+++ b/src/de/lmu/ifi/dbs/elki/database/datastore/RecordStore.java
@@ -1,26 +1,28 @@
package de.lmu.ifi.dbs.elki.database.datastore;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
/**
* Represents a storage which stores multiple values per object in a record fashion.
diff --git a/src/de/lmu/ifi/dbs/elki/database/datastore/WritableDataStore.java b/src/de/lmu/ifi/dbs/elki/database/datastore/WritableDataStore.java
index 56b1beb9..a06c4b3f 100644
--- a/src/de/lmu/ifi/dbs/elki/database/datastore/WritableDataStore.java
+++ b/src/de/lmu/ifi/dbs/elki/database/datastore/WritableDataStore.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.database.datastore;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.database.ids.DBID;
diff --git a/src/de/lmu/ifi/dbs/elki/database/datastore/WritableRecordStore.java b/src/de/lmu/ifi/dbs/elki/database/datastore/WritableRecordStore.java
index e4c18072..749acb0a 100644
--- a/src/de/lmu/ifi/dbs/elki/database/datastore/WritableRecordStore.java
+++ b/src/de/lmu/ifi/dbs/elki/database/datastore/WritableRecordStore.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.database.datastore;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.database.ids.DBID;
diff --git a/src/de/lmu/ifi/dbs/elki/database/datastore/memory/ArrayRecordStore.java b/src/de/lmu/ifi/dbs/elki/database/datastore/memory/ArrayRecordStore.java
index 701429df..507fe15b 100644
--- a/src/de/lmu/ifi/dbs/elki/database/datastore/memory/ArrayRecordStore.java
+++ b/src/de/lmu/ifi/dbs/elki/database/datastore/memory/ArrayRecordStore.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.database.datastore.memory;
-/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.database.datastore.DataStoreIDMap;
import de.lmu.ifi.dbs.elki.database.datastore.WritableDataStore;
@@ -59,7 +60,7 @@ public class ArrayRecordStore implements WritableRecordStore {
}
@Override
- public <T> WritableDataStore<T> getStorage(int col, @SuppressWarnings("unused") Class<? super T> datatype) {
+ public <T> WritableDataStore<T> getStorage(int col, Class<? super T> datatype) {
// TODO: add type checking safety?
return new StorageAccessor<T>(col);
}
@@ -142,7 +143,7 @@ public class ArrayRecordStore implements WritableRecordStore {
}
@Override
- public void delete(@SuppressWarnings("unused") DBID id) {
+ public void delete(DBID id) {
throw new UnsupportedOperationException("ArrayStore record values cannot be deleted.");
}
@@ -158,7 +159,7 @@ public class ArrayRecordStore implements WritableRecordStore {
}
@Override
- public boolean remove(@SuppressWarnings("unused") DBID id) {
+ public boolean remove(DBID id) {
throw new UnsupportedOperationException("ArrayStore records cannot be removed.");
}
} \ No newline at end of file
diff --git a/src/de/lmu/ifi/dbs/elki/database/datastore/memory/ArrayStore.java b/src/de/lmu/ifi/dbs/elki/database/datastore/memory/ArrayStore.java
index 4fea984e..96cadddf 100644
--- a/src/de/lmu/ifi/dbs/elki/database/datastore/memory/ArrayStore.java
+++ b/src/de/lmu/ifi/dbs/elki/database/datastore/memory/ArrayStore.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.database.datastore.memory;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.database.datastore.DataStoreIDMap;
import de.lmu.ifi.dbs.elki.database.datastore.WritableDataStore;
@@ -86,7 +87,7 @@ public class ArrayStore<T> implements WritableDataStore<T> {
}
@Override
- public void delete(@SuppressWarnings("unused") DBID id) {
+ public void delete(DBID id) {
throw new UnsupportedOperationException("Can't delete from a static array storage.");
}
diff --git a/src/de/lmu/ifi/dbs/elki/database/datastore/memory/MapRecordStore.java b/src/de/lmu/ifi/dbs/elki/database/datastore/memory/MapRecordStore.java
index 390c421e..31efc613 100644
--- a/src/de/lmu/ifi/dbs/elki/database/datastore/memory/MapRecordStore.java
+++ b/src/de/lmu/ifi/dbs/elki/database/datastore/memory/MapRecordStore.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.database.datastore.memory;
-/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.Map;
import java.util.concurrent.ConcurrentHashMap;
@@ -70,7 +71,7 @@ public class MapRecordStore implements WritableRecordStore {
}
@Override
- public <T> WritableDataStore<T> getStorage(int col, @SuppressWarnings("unused") Class<? super T> datatype) {
+ public <T> WritableDataStore<T> getStorage(int col, Class<? super T> datatype) {
// TODO: add type checking?
return new StorageAccessor<T>(col);
}
@@ -159,7 +160,7 @@ public class MapRecordStore implements WritableRecordStore {
}
@Override
- public void delete(@SuppressWarnings("unused") DBID id) {
+ public void delete(DBID id) {
throw new UnsupportedOperationException("Record storage values cannot be deleted.");
}
diff --git a/src/de/lmu/ifi/dbs/elki/database/datastore/memory/MapStore.java b/src/de/lmu/ifi/dbs/elki/database/datastore/memory/MapStore.java
index 078e9219..e8a806ec 100644
--- a/src/de/lmu/ifi/dbs/elki/database/datastore/memory/MapStore.java
+++ b/src/de/lmu/ifi/dbs/elki/database/datastore/memory/MapStore.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.database.datastore.memory;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.HashMap;
import java.util.Map;
diff --git a/src/de/lmu/ifi/dbs/elki/database/datastore/memory/MemoryDataStoreFactory.java b/src/de/lmu/ifi/dbs/elki/database/datastore/memory/MemoryDataStoreFactory.java
index 59465df0..2c64ee55 100644
--- a/src/de/lmu/ifi/dbs/elki/database/datastore/memory/MemoryDataStoreFactory.java
+++ b/src/de/lmu/ifi/dbs/elki/database/datastore/memory/MemoryDataStoreFactory.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.database.datastore.memory;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.database.datastore.DataStoreFactory;
import de.lmu.ifi.dbs.elki.database.datastore.RangeIDMap;
@@ -44,7 +45,7 @@ import de.lmu.ifi.dbs.elki.database.ids.DBIDs;
*/
public class MemoryDataStoreFactory implements DataStoreFactory {
@Override
- public <T> WritableDataStore<T> makeStorage(DBIDs ids, @SuppressWarnings("unused") int hints, @SuppressWarnings("unused") Class<? super T> dataclass) {
+ public <T> WritableDataStore<T> makeStorage(DBIDs ids, int hints, Class<? super T> dataclass) {
if (ids instanceof DBIDRange) {
DBIDRange range = (DBIDRange) ids;
Object[] data = new Object[range.size()];
@@ -55,7 +56,7 @@ public class MemoryDataStoreFactory implements DataStoreFactory {
}
@Override
- public WritableRecordStore makeRecordStorage(DBIDs ids, @SuppressWarnings("unused") int hints, Class<?>... dataclasses) {
+ public WritableRecordStore makeRecordStorage(DBIDs ids, int hints, Class<?>... dataclasses) {
if (ids instanceof DBIDRange) {
DBIDRange range = (DBIDRange) ids;
Object[][] data = new Object[range.size()][dataclasses.length];
diff --git a/src/de/lmu/ifi/dbs/elki/database/ids/ArrayDBIDs.java b/src/de/lmu/ifi/dbs/elki/database/ids/ArrayDBIDs.java
index 24fa5cfe..015d881a 100644
--- a/src/de/lmu/ifi/dbs/elki/database/ids/ArrayDBIDs.java
+++ b/src/de/lmu/ifi/dbs/elki/database/ids/ArrayDBIDs.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.database.ids;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.List;
diff --git a/src/de/lmu/ifi/dbs/elki/database/ids/ArrayModifiableDBIDs.java b/src/de/lmu/ifi/dbs/elki/database/ids/ArrayModifiableDBIDs.java
index 97d65489..1320ba4e 100644
--- a/src/de/lmu/ifi/dbs/elki/database/ids/ArrayModifiableDBIDs.java
+++ b/src/de/lmu/ifi/dbs/elki/database/ids/ArrayModifiableDBIDs.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.database.ids;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.List;
diff --git a/src/de/lmu/ifi/dbs/elki/database/ids/ArrayStaticDBIDs.java b/src/de/lmu/ifi/dbs/elki/database/ids/ArrayStaticDBIDs.java
index e946f273..2cf0f030 100644
--- a/src/de/lmu/ifi/dbs/elki/database/ids/ArrayStaticDBIDs.java
+++ b/src/de/lmu/ifi/dbs/elki/database/ids/ArrayStaticDBIDs.java
@@ -1,26 +1,28 @@
package de.lmu.ifi.dbs.elki.database.ids;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
/**
* Unmodifiable, indexed DBIDs.
diff --git a/src/de/lmu/ifi/dbs/elki/database/ids/DBID.java b/src/de/lmu/ifi/dbs/elki/database/ids/DBID.java
index 1545853c..41e67c4e 100644
--- a/src/de/lmu/ifi/dbs/elki/database/ids/DBID.java
+++ b/src/de/lmu/ifi/dbs/elki/database/ids/DBID.java
@@ -1,26 +1,28 @@
package de.lmu.ifi.dbs.elki.database.ids;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
+
/**
diff --git a/src/de/lmu/ifi/dbs/elki/database/ids/DBIDFactory.java b/src/de/lmu/ifi/dbs/elki/database/ids/DBIDFactory.java
index bd267c4c..cc5be115 100644
--- a/src/de/lmu/ifi/dbs/elki/database/ids/DBIDFactory.java
+++ b/src/de/lmu/ifi/dbs/elki/database/ids/DBIDFactory.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.database.ids;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.database.ids.integer.TrivialDBIDFactory;
import de.lmu.ifi.dbs.elki.persistent.ByteBufferSerializer;
diff --git a/src/de/lmu/ifi/dbs/elki/database/ids/DBIDPair.java b/src/de/lmu/ifi/dbs/elki/database/ids/DBIDPair.java
index fb9f4573..fdaff560 100644
--- a/src/de/lmu/ifi/dbs/elki/database/ids/DBIDPair.java
+++ b/src/de/lmu/ifi/dbs/elki/database/ids/DBIDPair.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.database.ids;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.utilities.pairs.PairInterface;
diff --git a/src/de/lmu/ifi/dbs/elki/database/ids/DBIDRange.java b/src/de/lmu/ifi/dbs/elki/database/ids/DBIDRange.java
index 9800f796..4143c570 100644
--- a/src/de/lmu/ifi/dbs/elki/database/ids/DBIDRange.java
+++ b/src/de/lmu/ifi/dbs/elki/database/ids/DBIDRange.java
@@ -1,26 +1,28 @@
package de.lmu.ifi.dbs.elki.database.ids;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
/**
* Static DBID range.
diff --git a/src/de/lmu/ifi/dbs/elki/database/ids/DBIDUtil.java b/src/de/lmu/ifi/dbs/elki/database/ids/DBIDUtil.java
index 88bfcfc2..3a62c222 100644
--- a/src/de/lmu/ifi/dbs/elki/database/ids/DBIDUtil.java
+++ b/src/de/lmu/ifi/dbs/elki/database/ids/DBIDUtil.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.database.ids;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.Random;
diff --git a/src/de/lmu/ifi/dbs/elki/database/ids/DBIDs.java b/src/de/lmu/ifi/dbs/elki/database/ids/DBIDs.java
index 2a3eee3e..c1a52d6a 100644
--- a/src/de/lmu/ifi/dbs/elki/database/ids/DBIDs.java
+++ b/src/de/lmu/ifi/dbs/elki/database/ids/DBIDs.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.database.ids;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.Collection;
import java.util.Iterator;
diff --git a/src/de/lmu/ifi/dbs/elki/database/ids/EmptyDBIDs.java b/src/de/lmu/ifi/dbs/elki/database/ids/EmptyDBIDs.java
index b207ec0a..bee2faab 100644
--- a/src/de/lmu/ifi/dbs/elki/database/ids/EmptyDBIDs.java
+++ b/src/de/lmu/ifi/dbs/elki/database/ids/EmptyDBIDs.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.database.ids;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.AbstractList;
import java.util.ArrayList;
@@ -41,7 +42,7 @@ class EmptyDBIDs extends AbstractList<DBID> implements ArrayStaticDBIDs {
}
@Override
- public boolean contains(@SuppressWarnings("unused") Object o) {
+ public boolean contains(Object o) {
return false;
}
@@ -61,7 +62,7 @@ class EmptyDBIDs extends AbstractList<DBID> implements ArrayStaticDBIDs {
}
@Override
- public DBID get(@SuppressWarnings("unused") int i) {
+ public DBID get(int i) {
throw new ArrayIndexOutOfBoundsException();
}
} \ No newline at end of file
diff --git a/src/de/lmu/ifi/dbs/elki/database/ids/HashSetDBIDs.java b/src/de/lmu/ifi/dbs/elki/database/ids/HashSetDBIDs.java
index f5ee96d5..f449180f 100644
--- a/src/de/lmu/ifi/dbs/elki/database/ids/HashSetDBIDs.java
+++ b/src/de/lmu/ifi/dbs/elki/database/ids/HashSetDBIDs.java
@@ -1,26 +1,28 @@
package de.lmu.ifi.dbs.elki.database.ids;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
/**
* Hash-organized DBIDs
diff --git a/src/de/lmu/ifi/dbs/elki/database/ids/HashSetModifiableDBIDs.java b/src/de/lmu/ifi/dbs/elki/database/ids/HashSetModifiableDBIDs.java
index 7622dc9e..03805590 100644
--- a/src/de/lmu/ifi/dbs/elki/database/ids/HashSetModifiableDBIDs.java
+++ b/src/de/lmu/ifi/dbs/elki/database/ids/HashSetModifiableDBIDs.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.database.ids;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.Set;
diff --git a/src/de/lmu/ifi/dbs/elki/database/ids/ModifiableDBIDs.java b/src/de/lmu/ifi/dbs/elki/database/ids/ModifiableDBIDs.java
index a7d29967..57d8c578 100644
--- a/src/de/lmu/ifi/dbs/elki/database/ids/ModifiableDBIDs.java
+++ b/src/de/lmu/ifi/dbs/elki/database/ids/ModifiableDBIDs.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.database.ids;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.Collection;
diff --git a/src/de/lmu/ifi/dbs/elki/database/ids/SetDBIDs.java b/src/de/lmu/ifi/dbs/elki/database/ids/SetDBIDs.java
index b5d531ce..6509a57f 100644
--- a/src/de/lmu/ifi/dbs/elki/database/ids/SetDBIDs.java
+++ b/src/de/lmu/ifi/dbs/elki/database/ids/SetDBIDs.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.database.ids;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.Set;
diff --git a/src/de/lmu/ifi/dbs/elki/database/ids/StaticDBIDs.java b/src/de/lmu/ifi/dbs/elki/database/ids/StaticDBIDs.java
index 35abc440..08676215 100644
--- a/src/de/lmu/ifi/dbs/elki/database/ids/StaticDBIDs.java
+++ b/src/de/lmu/ifi/dbs/elki/database/ids/StaticDBIDs.java
@@ -1,26 +1,28 @@
package de.lmu.ifi.dbs.elki.database.ids;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
/**
* Unmodifiable DBIDs.
diff --git a/src/de/lmu/ifi/dbs/elki/database/ids/TreeSetDBIDs.java b/src/de/lmu/ifi/dbs/elki/database/ids/TreeSetDBIDs.java
index 189b6cfb..43fff9ef 100644
--- a/src/de/lmu/ifi/dbs/elki/database/ids/TreeSetDBIDs.java
+++ b/src/de/lmu/ifi/dbs/elki/database/ids/TreeSetDBIDs.java
@@ -1,26 +1,28 @@
package de.lmu.ifi.dbs.elki.database.ids;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
/**
* Marker for sorted, tree-organized DBIDs
diff --git a/src/de/lmu/ifi/dbs/elki/database/ids/TreeSetModifiableDBIDs.java b/src/de/lmu/ifi/dbs/elki/database/ids/TreeSetModifiableDBIDs.java
index 09b93411..4212f847 100644
--- a/src/de/lmu/ifi/dbs/elki/database/ids/TreeSetModifiableDBIDs.java
+++ b/src/de/lmu/ifi/dbs/elki/database/ids/TreeSetModifiableDBIDs.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.database.ids;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.NavigableSet;
diff --git a/src/de/lmu/ifi/dbs/elki/database/ids/generic/GenericArrayModifiableDBIDs.java b/src/de/lmu/ifi/dbs/elki/database/ids/generic/GenericArrayModifiableDBIDs.java
index 3beb4300..0316f82d 100644
--- a/src/de/lmu/ifi/dbs/elki/database/ids/generic/GenericArrayModifiableDBIDs.java
+++ b/src/de/lmu/ifi/dbs/elki/database/ids/generic/GenericArrayModifiableDBIDs.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.database.ids.generic;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.ArrayList;
import java.util.Collection;
diff --git a/src/de/lmu/ifi/dbs/elki/database/ids/generic/GenericHashSetModifiableDBIDs.java b/src/de/lmu/ifi/dbs/elki/database/ids/generic/GenericHashSetModifiableDBIDs.java
index 1a6b1fa6..6d251cd8 100644
--- a/src/de/lmu/ifi/dbs/elki/database/ids/generic/GenericHashSetModifiableDBIDs.java
+++ b/src/de/lmu/ifi/dbs/elki/database/ids/generic/GenericHashSetModifiableDBIDs.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.database.ids.generic;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.Collection;
import java.util.HashSet;
diff --git a/src/de/lmu/ifi/dbs/elki/database/ids/generic/GenericTreeSetModifiableDBIDs.java b/src/de/lmu/ifi/dbs/elki/database/ids/generic/GenericTreeSetModifiableDBIDs.java
index b6415e77..afd56730 100644
--- a/src/de/lmu/ifi/dbs/elki/database/ids/generic/GenericTreeSetModifiableDBIDs.java
+++ b/src/de/lmu/ifi/dbs/elki/database/ids/generic/GenericTreeSetModifiableDBIDs.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.database.ids.generic;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.Collection;
import java.util.TreeSet;
diff --git a/src/de/lmu/ifi/dbs/elki/database/ids/generic/MaskedDBIDs.java b/src/de/lmu/ifi/dbs/elki/database/ids/generic/MaskedDBIDs.java
index fc3d08f8..77d5c063 100644
--- a/src/de/lmu/ifi/dbs/elki/database/ids/generic/MaskedDBIDs.java
+++ b/src/de/lmu/ifi/dbs/elki/database/ids/generic/MaskedDBIDs.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.database.ids.generic;
-/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.AbstractCollection;
import java.util.BitSet;
@@ -170,12 +171,12 @@ public class MaskedDBIDs extends AbstractCollection<DBID> implements DBIDs, Coll
}
@Override
- public boolean add(@SuppressWarnings("unused") DBID e) {
+ public boolean add(DBID e) {
throw new UnsupportedOperationException();
}
@Override
- public boolean remove(@SuppressWarnings("unused") Object o) {
+ public boolean remove(Object o) {
throw new UnsupportedOperationException();
}
diff --git a/src/de/lmu/ifi/dbs/elki/database/ids/generic/MergedDBIDs.java b/src/de/lmu/ifi/dbs/elki/database/ids/generic/MergedDBIDs.java
index 6554edb9..ce28ac38 100644
--- a/src/de/lmu/ifi/dbs/elki/database/ids/generic/MergedDBIDs.java
+++ b/src/de/lmu/ifi/dbs/elki/database/ids/generic/MergedDBIDs.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.database.ids.generic;
-/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.Collection;
import java.util.Iterator;
@@ -130,27 +131,27 @@ public class MergedDBIDs implements DBIDs, Collection<DBID> {
}
@Override
- public boolean add(@SuppressWarnings("unused") DBID e) {
+ public boolean add(DBID e) {
throw new UnsupportedOperationException(MergedDBIDs.class.getName() + " are unmodifiable!");
}
@Override
- public boolean addAll(@SuppressWarnings("unused") Collection<? extends DBID> c) {
+ public boolean addAll(Collection<? extends DBID> c) {
throw new UnsupportedOperationException(MergedDBIDs.class.getName() + " are unmodifiable!");
}
@Override
- public boolean remove(@SuppressWarnings("unused") Object o) {
+ public boolean remove(Object o) {
throw new UnsupportedOperationException(MergedDBIDs.class.getName() + " are unmodifiable!");
}
@Override
- public boolean removeAll(@SuppressWarnings("unused") Collection<?> c) {
+ public boolean removeAll(Collection<?> c) {
throw new UnsupportedOperationException(MergedDBIDs.class.getName() + " are unmodifiable!");
}
@Override
- public boolean retainAll(@SuppressWarnings("unused") Collection<?> c) {
+ public boolean retainAll(Collection<?> c) {
throw new UnsupportedOperationException(MergedDBIDs.class.getName() + " are unmodifiable!");
}
}
diff --git a/src/de/lmu/ifi/dbs/elki/database/ids/generic/UnmodifiableDBIDs.java b/src/de/lmu/ifi/dbs/elki/database/ids/generic/UnmodifiableDBIDs.java
index 398aab33..908dabd3 100644
--- a/src/de/lmu/ifi/dbs/elki/database/ids/generic/UnmodifiableDBIDs.java
+++ b/src/de/lmu/ifi/dbs/elki/database/ids/generic/UnmodifiableDBIDs.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.database.ids.generic;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.Collection;
import java.util.Collections;
diff --git a/src/de/lmu/ifi/dbs/elki/database/ids/integer/IntegerArrayStaticDBIDs.java b/src/de/lmu/ifi/dbs/elki/database/ids/integer/IntegerArrayStaticDBIDs.java
index 6f80e9f7..b617b4c4 100644
--- a/src/de/lmu/ifi/dbs/elki/database/ids/integer/IntegerArrayStaticDBIDs.java
+++ b/src/de/lmu/ifi/dbs/elki/database/ids/integer/IntegerArrayStaticDBIDs.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.database.ids.integer;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.AbstractList;
import java.util.Collection;
diff --git a/src/de/lmu/ifi/dbs/elki/database/ids/integer/IntegerDBID.java b/src/de/lmu/ifi/dbs/elki/database/ids/integer/IntegerDBID.java
index 46794a28..2842ca75 100644
--- a/src/de/lmu/ifi/dbs/elki/database/ids/integer/IntegerDBID.java
+++ b/src/de/lmu/ifi/dbs/elki/database/ids/integer/IntegerDBID.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.database.ids.integer;
-/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.nio.ByteBuffer;
import java.util.AbstractList;
@@ -230,7 +231,7 @@ class IntegerDBID extends AbstractList<DBID> implements DBID {
}
@Override
- public int getByteSize(@SuppressWarnings("unused") DBID object) throws UnsupportedOperationException {
+ public int getByteSize(DBID object) throws UnsupportedOperationException {
return getFixedByteSize();
}
diff --git a/src/de/lmu/ifi/dbs/elki/database/ids/integer/IntegerDBIDPair.java b/src/de/lmu/ifi/dbs/elki/database/ids/integer/IntegerDBIDPair.java
index 3f6e4c90..742bab57 100644
--- a/src/de/lmu/ifi/dbs/elki/database/ids/integer/IntegerDBIDPair.java
+++ b/src/de/lmu/ifi/dbs/elki/database/ids/integer/IntegerDBIDPair.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.database.ids.integer;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.database.ids.DBIDPair;
diff --git a/src/de/lmu/ifi/dbs/elki/database/ids/integer/IntegerDBIDRange.java b/src/de/lmu/ifi/dbs/elki/database/ids/integer/IntegerDBIDRange.java
index d17312a7..1142f1a6 100644
--- a/src/de/lmu/ifi/dbs/elki/database/ids/integer/IntegerDBIDRange.java
+++ b/src/de/lmu/ifi/dbs/elki/database/ids/integer/IntegerDBIDRange.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.database.ids.integer;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.AbstractList;
import java.util.Collection;
diff --git a/src/de/lmu/ifi/dbs/elki/database/ids/integer/ReusingDBIDFactory.java b/src/de/lmu/ifi/dbs/elki/database/ids/integer/ReusingDBIDFactory.java
index 4f651dab..8e4600db 100644
--- a/src/de/lmu/ifi/dbs/elki/database/ids/integer/ReusingDBIDFactory.java
+++ b/src/de/lmu/ifi/dbs/elki/database/ids/integer/ReusingDBIDFactory.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.database.ids.integer;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.ArrayList;
import java.util.BitSet;
diff --git a/src/de/lmu/ifi/dbs/elki/database/ids/integer/SimpleDBIDFactory.java b/src/de/lmu/ifi/dbs/elki/database/ids/integer/SimpleDBIDFactory.java
index a5304e44..3348701e 100644
--- a/src/de/lmu/ifi/dbs/elki/database/ids/integer/SimpleDBIDFactory.java
+++ b/src/de/lmu/ifi/dbs/elki/database/ids/integer/SimpleDBIDFactory.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.database.ids.integer;
-/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.database.ids.ArrayModifiableDBIDs;
import de.lmu.ifi.dbs.elki.database.ids.DBID;
@@ -81,7 +82,7 @@ public class SimpleDBIDFactory implements DBIDFactory {
}
@Override
- public void deallocateSingleDBID(@SuppressWarnings("unused") DBID id) {
+ public void deallocateSingleDBID(DBID id) {
// ignore.
}
@@ -96,7 +97,7 @@ public class SimpleDBIDFactory implements DBIDFactory {
}
@Override
- public void deallocateDBIDRange(@SuppressWarnings("unused") DBIDRange range) {
+ public void deallocateDBIDRange(DBIDRange range) {
// ignore.
}
diff --git a/src/de/lmu/ifi/dbs/elki/database/ids/integer/TrivialDBIDFactory.java b/src/de/lmu/ifi/dbs/elki/database/ids/integer/TrivialDBIDFactory.java
index 04c164d7..ee49e2f1 100644
--- a/src/de/lmu/ifi/dbs/elki/database/ids/integer/TrivialDBIDFactory.java
+++ b/src/de/lmu/ifi/dbs/elki/database/ids/integer/TrivialDBIDFactory.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.database.ids.integer;
-/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.concurrent.atomic.AtomicInteger;
@@ -79,7 +80,7 @@ public class TrivialDBIDFactory implements DBIDFactory {
}
@Override
- public void deallocateSingleDBID(@SuppressWarnings("unused") DBID id) {
+ public void deallocateSingleDBID(DBID id) {
// ignore.
}
@@ -94,7 +95,7 @@ public class TrivialDBIDFactory implements DBIDFactory {
}
@Override
- public void deallocateDBIDRange(@SuppressWarnings("unused") DBIDRange range) {
+ public void deallocateDBIDRange(DBIDRange range) {
// ignore.
}
diff --git a/src/de/lmu/ifi/dbs/elki/database/query/AbstractDataBasedQuery.java b/src/de/lmu/ifi/dbs/elki/database/query/AbstractDataBasedQuery.java
index 67e8bb97..bb913602 100644
--- a/src/de/lmu/ifi/dbs/elki/database/query/AbstractDataBasedQuery.java
+++ b/src/de/lmu/ifi/dbs/elki/database/query/AbstractDataBasedQuery.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.database.query;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.database.relation.Relation;
diff --git a/src/de/lmu/ifi/dbs/elki/database/query/DatabaseQuery.java b/src/de/lmu/ifi/dbs/elki/database/query/DatabaseQuery.java
index 7690bae4..5d56a012 100644
--- a/src/de/lmu/ifi/dbs/elki/database/query/DatabaseQuery.java
+++ b/src/de/lmu/ifi/dbs/elki/database/query/DatabaseQuery.java
@@ -1,26 +1,28 @@
package de.lmu.ifi.dbs.elki.database.query;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
/**
* General interface for database queries.
diff --git a/src/de/lmu/ifi/dbs/elki/database/query/DistanceResultPair.java b/src/de/lmu/ifi/dbs/elki/database/query/DistanceResultPair.java
index 1878fd4b..ccdef3ef 100644
--- a/src/de/lmu/ifi/dbs/elki/database/query/DistanceResultPair.java
+++ b/src/de/lmu/ifi/dbs/elki/database/query/DistanceResultPair.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.database.query;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.database.ids.DBID;
import de.lmu.ifi.dbs.elki.distance.distancevalue.Distance;
diff --git a/src/de/lmu/ifi/dbs/elki/database/query/DistanceSimilarityQuery.java b/src/de/lmu/ifi/dbs/elki/database/query/DistanceSimilarityQuery.java
index a39d06ba..44f735ec 100644
--- a/src/de/lmu/ifi/dbs/elki/database/query/DistanceSimilarityQuery.java
+++ b/src/de/lmu/ifi/dbs/elki/database/query/DistanceSimilarityQuery.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.database.query;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.database.query.distance.DistanceQuery;
import de.lmu.ifi.dbs.elki.database.query.similarity.SimilarityQuery;
diff --git a/src/de/lmu/ifi/dbs/elki/database/query/DoubleDistanceResultPair.java b/src/de/lmu/ifi/dbs/elki/database/query/DoubleDistanceResultPair.java
index ed0b7599..cbe2cb23 100644
--- a/src/de/lmu/ifi/dbs/elki/database/query/DoubleDistanceResultPair.java
+++ b/src/de/lmu/ifi/dbs/elki/database/query/DoubleDistanceResultPair.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.database.query;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.database.ids.DBID;
import de.lmu.ifi.dbs.elki.distance.distancevalue.DoubleDistance;
diff --git a/src/de/lmu/ifi/dbs/elki/database/query/GenericDistanceResultPair.java b/src/de/lmu/ifi/dbs/elki/database/query/GenericDistanceResultPair.java
index f08090c8..19f17c48 100644
--- a/src/de/lmu/ifi/dbs/elki/database/query/GenericDistanceResultPair.java
+++ b/src/de/lmu/ifi/dbs/elki/database/query/GenericDistanceResultPair.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.database.query;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.database.ids.DBID;
import de.lmu.ifi.dbs.elki.distance.distancevalue.Distance;
diff --git a/src/de/lmu/ifi/dbs/elki/database/query/LinearScanQuery.java b/src/de/lmu/ifi/dbs/elki/database/query/LinearScanQuery.java
index d9a1991c..80f2c5b5 100644
--- a/src/de/lmu/ifi/dbs/elki/database/query/LinearScanQuery.java
+++ b/src/de/lmu/ifi/dbs/elki/database/query/LinearScanQuery.java
@@ -1,26 +1,28 @@
package de.lmu.ifi.dbs.elki.database.query;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
/**
* Marker interface for linear scan (slow, non-accelerated) queries.
diff --git a/src/de/lmu/ifi/dbs/elki/database/query/distance/AbstractDatabaseDistanceQuery.java b/src/de/lmu/ifi/dbs/elki/database/query/distance/AbstractDatabaseDistanceQuery.java
index 2a099991..fff15c93 100644
--- a/src/de/lmu/ifi/dbs/elki/database/query/distance/AbstractDatabaseDistanceQuery.java
+++ b/src/de/lmu/ifi/dbs/elki/database/query/distance/AbstractDatabaseDistanceQuery.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.database.query.distance;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.database.ids.DBID;
import de.lmu.ifi.dbs.elki.database.relation.Relation;
diff --git a/src/de/lmu/ifi/dbs/elki/database/query/distance/AbstractDistanceQuery.java b/src/de/lmu/ifi/dbs/elki/database/query/distance/AbstractDistanceQuery.java
index 1b4a45c3..e29ccc5e 100644
--- a/src/de/lmu/ifi/dbs/elki/database/query/distance/AbstractDistanceQuery.java
+++ b/src/de/lmu/ifi/dbs/elki/database/query/distance/AbstractDistanceQuery.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.database.query.distance;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.database.ids.DBID;
import de.lmu.ifi.dbs.elki.database.query.AbstractDataBasedQuery;
diff --git a/src/de/lmu/ifi/dbs/elki/database/query/distance/DBIDDistanceQuery.java b/src/de/lmu/ifi/dbs/elki/database/query/distance/DBIDDistanceQuery.java
index 932f44eb..cf650b0f 100644
--- a/src/de/lmu/ifi/dbs/elki/database/query/distance/DBIDDistanceQuery.java
+++ b/src/de/lmu/ifi/dbs/elki/database/query/distance/DBIDDistanceQuery.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.database.query.distance;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.database.ids.DBID;
import de.lmu.ifi.dbs.elki.database.relation.Relation;
diff --git a/src/de/lmu/ifi/dbs/elki/database/query/distance/DistanceQuery.java b/src/de/lmu/ifi/dbs/elki/database/query/distance/DistanceQuery.java
index 0076e4cc..63be8fe5 100644
--- a/src/de/lmu/ifi/dbs/elki/database/query/distance/DistanceQuery.java
+++ b/src/de/lmu/ifi/dbs/elki/database/query/distance/DistanceQuery.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.database.query.distance;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.database.ids.DBID;
import de.lmu.ifi.dbs.elki.database.query.DatabaseQuery;
diff --git a/src/de/lmu/ifi/dbs/elki/database/query/distance/PrimitiveDistanceQuery.java b/src/de/lmu/ifi/dbs/elki/database/query/distance/PrimitiveDistanceQuery.java
index 6a84c967..6c056a0b 100644
--- a/src/de/lmu/ifi/dbs/elki/database/query/distance/PrimitiveDistanceQuery.java
+++ b/src/de/lmu/ifi/dbs/elki/database/query/distance/PrimitiveDistanceQuery.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.database.query.distance;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.database.ids.DBID;
import de.lmu.ifi.dbs.elki.database.relation.Relation;
diff --git a/src/de/lmu/ifi/dbs/elki/database/query/distance/PrimitiveDistanceSimilarityQuery.java b/src/de/lmu/ifi/dbs/elki/database/query/distance/PrimitiveDistanceSimilarityQuery.java
index 914fd89b..7013c693 100644
--- a/src/de/lmu/ifi/dbs/elki/database/query/distance/PrimitiveDistanceSimilarityQuery.java
+++ b/src/de/lmu/ifi/dbs/elki/database/query/distance/PrimitiveDistanceSimilarityQuery.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.database.query.distance;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.database.ids.DBID;
import de.lmu.ifi.dbs.elki.database.query.DistanceSimilarityQuery;
diff --git a/src/de/lmu/ifi/dbs/elki/database/query/distance/SpatialDistanceQuery.java b/src/de/lmu/ifi/dbs/elki/database/query/distance/SpatialDistanceQuery.java
index 5cb9ee68..c37c5b18 100644
--- a/src/de/lmu/ifi/dbs/elki/database/query/distance/SpatialDistanceQuery.java
+++ b/src/de/lmu/ifi/dbs/elki/database/query/distance/SpatialDistanceQuery.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.database.query.distance;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.data.spatial.SpatialComparable;
import de.lmu.ifi.dbs.elki.database.ids.DBID;
diff --git a/src/de/lmu/ifi/dbs/elki/database/query/distance/SpatialPrimitiveDistanceQuery.java b/src/de/lmu/ifi/dbs/elki/database/query/distance/SpatialPrimitiveDistanceQuery.java
index edcdbb6b..ddafc622 100644
--- a/src/de/lmu/ifi/dbs/elki/database/query/distance/SpatialPrimitiveDistanceQuery.java
+++ b/src/de/lmu/ifi/dbs/elki/database/query/distance/SpatialPrimitiveDistanceQuery.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.database.query.distance;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.data.spatial.SpatialComparable;
import de.lmu.ifi.dbs.elki.database.ids.DBID;
diff --git a/src/de/lmu/ifi/dbs/elki/database/query/knn/AbstractDistanceKNNQuery.java b/src/de/lmu/ifi/dbs/elki/database/query/knn/AbstractDistanceKNNQuery.java
index fb9b3702..296a3950 100644
--- a/src/de/lmu/ifi/dbs/elki/database/query/knn/AbstractDistanceKNNQuery.java
+++ b/src/de/lmu/ifi/dbs/elki/database/query/knn/AbstractDistanceKNNQuery.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.database.query.knn;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.List;
diff --git a/src/de/lmu/ifi/dbs/elki/database/query/knn/KNNQuery.java b/src/de/lmu/ifi/dbs/elki/database/query/knn/KNNQuery.java
index 7bda2c85..81b4ded8 100644
--- a/src/de/lmu/ifi/dbs/elki/database/query/knn/KNNQuery.java
+++ b/src/de/lmu/ifi/dbs/elki/database/query/knn/KNNQuery.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.database.query.knn;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.List;
import java.util.Map;
diff --git a/src/de/lmu/ifi/dbs/elki/database/query/knn/LinearScanKNNQuery.java b/src/de/lmu/ifi/dbs/elki/database/query/knn/LinearScanKNNQuery.java
index d4a4dd73..b52c6dec 100644
--- a/src/de/lmu/ifi/dbs/elki/database/query/knn/LinearScanKNNQuery.java
+++ b/src/de/lmu/ifi/dbs/elki/database/query/knn/LinearScanKNNQuery.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.database.query.knn;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.ArrayList;
import java.util.List;
diff --git a/src/de/lmu/ifi/dbs/elki/database/query/knn/LinearScanPrimitiveDistanceKNNQuery.java b/src/de/lmu/ifi/dbs/elki/database/query/knn/LinearScanPrimitiveDistanceKNNQuery.java
index 1d16f1af..8af7e549 100644
--- a/src/de/lmu/ifi/dbs/elki/database/query/knn/LinearScanPrimitiveDistanceKNNQuery.java
+++ b/src/de/lmu/ifi/dbs/elki/database/query/knn/LinearScanPrimitiveDistanceKNNQuery.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.database.query.knn;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.ArrayList;
import java.util.List;
diff --git a/src/de/lmu/ifi/dbs/elki/database/query/knn/LinearScanRawDoubleDistanceKNNQuery.java b/src/de/lmu/ifi/dbs/elki/database/query/knn/LinearScanRawDoubleDistanceKNNQuery.java
index dff33e47..63652e5b 100644
--- a/src/de/lmu/ifi/dbs/elki/database/query/knn/LinearScanRawDoubleDistanceKNNQuery.java
+++ b/src/de/lmu/ifi/dbs/elki/database/query/knn/LinearScanRawDoubleDistanceKNNQuery.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.database.query.knn;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.Arrays;
import java.util.List;
diff --git a/src/de/lmu/ifi/dbs/elki/database/query/knn/PreprocessorKNNQuery.java b/src/de/lmu/ifi/dbs/elki/database/query/knn/PreprocessorKNNQuery.java
index b76d62a6..d82fc20e 100644
--- a/src/de/lmu/ifi/dbs/elki/database/query/knn/PreprocessorKNNQuery.java
+++ b/src/de/lmu/ifi/dbs/elki/database/query/knn/PreprocessorKNNQuery.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.database.query.knn;
-/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.ArrayList;
import java.util.List;
@@ -154,7 +155,6 @@ public class PreprocessorKNNQuery<O, D extends Distance<D>> extends AbstractData
}
}
- @SuppressWarnings("unused")
@Override
public List<DistanceResultPair<D>> getKNNForObject(O obj, int k) {
throw new AbortException("Preprocessor KNN query only supports ID queries.");
diff --git a/src/de/lmu/ifi/dbs/elki/database/query/range/AbstractDistanceRangeQuery.java b/src/de/lmu/ifi/dbs/elki/database/query/range/AbstractDistanceRangeQuery.java
index 5080c364..e35cb99f 100644
--- a/src/de/lmu/ifi/dbs/elki/database/query/range/AbstractDistanceRangeQuery.java
+++ b/src/de/lmu/ifi/dbs/elki/database/query/range/AbstractDistanceRangeQuery.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.database.query.range;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.ArrayList;
import java.util.List;
diff --git a/src/de/lmu/ifi/dbs/elki/database/query/range/LinearScanPrimitiveDistanceRangeQuery.java b/src/de/lmu/ifi/dbs/elki/database/query/range/LinearScanPrimitiveDistanceRangeQuery.java
index 10dfc825..6031a30e 100644
--- a/src/de/lmu/ifi/dbs/elki/database/query/range/LinearScanPrimitiveDistanceRangeQuery.java
+++ b/src/de/lmu/ifi/dbs/elki/database/query/range/LinearScanPrimitiveDistanceRangeQuery.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.database.query.range;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.List;
diff --git a/src/de/lmu/ifi/dbs/elki/database/query/range/LinearScanRangeQuery.java b/src/de/lmu/ifi/dbs/elki/database/query/range/LinearScanRangeQuery.java
index 0281ba20..d4b7296e 100644
--- a/src/de/lmu/ifi/dbs/elki/database/query/range/LinearScanRangeQuery.java
+++ b/src/de/lmu/ifi/dbs/elki/database/query/range/LinearScanRangeQuery.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.database.query.range;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.ArrayList;
import java.util.Collections;
diff --git a/src/de/lmu/ifi/dbs/elki/database/query/range/LinearScanRawDoubleDistanceRangeQuery.java b/src/de/lmu/ifi/dbs/elki/database/query/range/LinearScanRawDoubleDistanceRangeQuery.java
index 71ab5ed9..b33c871e 100644
--- a/src/de/lmu/ifi/dbs/elki/database/query/range/LinearScanRawDoubleDistanceRangeQuery.java
+++ b/src/de/lmu/ifi/dbs/elki/database/query/range/LinearScanRawDoubleDistanceRangeQuery.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.database.query.range;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.ArrayList;
import java.util.Collections;
diff --git a/src/de/lmu/ifi/dbs/elki/database/query/range/RangeQuery.java b/src/de/lmu/ifi/dbs/elki/database/query/range/RangeQuery.java
index 403958a6..7d9ebd42 100644
--- a/src/de/lmu/ifi/dbs/elki/database/query/range/RangeQuery.java
+++ b/src/de/lmu/ifi/dbs/elki/database/query/range/RangeQuery.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.database.query.range;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.List;
diff --git a/src/de/lmu/ifi/dbs/elki/database/query/rknn/AbstractRKNNQuery.java b/src/de/lmu/ifi/dbs/elki/database/query/rknn/AbstractRKNNQuery.java
index 7977c804..5cecaf88 100644
--- a/src/de/lmu/ifi/dbs/elki/database/query/rknn/AbstractRKNNQuery.java
+++ b/src/de/lmu/ifi/dbs/elki/database/query/rknn/AbstractRKNNQuery.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.database.query.rknn;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.List;
diff --git a/src/de/lmu/ifi/dbs/elki/database/query/rknn/LinearScanRKNNQuery.java b/src/de/lmu/ifi/dbs/elki/database/query/rknn/LinearScanRKNNQuery.java
index 3d694006..b3e581e7 100644
--- a/src/de/lmu/ifi/dbs/elki/database/query/rknn/LinearScanRKNNQuery.java
+++ b/src/de/lmu/ifi/dbs/elki/database/query/rknn/LinearScanRKNNQuery.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.database.query.rknn;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.ArrayList;
import java.util.Collections;
diff --git a/src/de/lmu/ifi/dbs/elki/database/query/rknn/PreprocessorRKNNQuery.java b/src/de/lmu/ifi/dbs/elki/database/query/rknn/PreprocessorRKNNQuery.java
index b60e4271..5303666f 100644
--- a/src/de/lmu/ifi/dbs/elki/database/query/rknn/PreprocessorRKNNQuery.java
+++ b/src/de/lmu/ifi/dbs/elki/database/query/rknn/PreprocessorRKNNQuery.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.database.query.rknn;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.ArrayList;
import java.util.List;
@@ -81,7 +82,6 @@ public class PreprocessorRKNNQuery<O, D extends Distance<D>> extends AbstractDat
return preprocessor.getRKNN(id);
}
- @SuppressWarnings("unused")
@Override
public List<DistanceResultPair<D>> getRKNNForObject(O obj, int k) {
throw new AbortException("Preprocessor KNN query only supports ID queries.");
diff --git a/src/de/lmu/ifi/dbs/elki/database/query/rknn/RKNNQuery.java b/src/de/lmu/ifi/dbs/elki/database/query/rknn/RKNNQuery.java
index 0b89c233..df5ac43c 100644
--- a/src/de/lmu/ifi/dbs/elki/database/query/rknn/RKNNQuery.java
+++ b/src/de/lmu/ifi/dbs/elki/database/query/rknn/RKNNQuery.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.database.query.rknn;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.List;
diff --git a/src/de/lmu/ifi/dbs/elki/database/query/similarity/AbstractDBIDSimilarityQuery.java b/src/de/lmu/ifi/dbs/elki/database/query/similarity/AbstractDBIDSimilarityQuery.java
index 488f6b7c..2e263cd9 100644
--- a/src/de/lmu/ifi/dbs/elki/database/query/similarity/AbstractDBIDSimilarityQuery.java
+++ b/src/de/lmu/ifi/dbs/elki/database/query/similarity/AbstractDBIDSimilarityQuery.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.database.query.similarity;
-/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.database.ids.DBID;
import de.lmu.ifi.dbs.elki.database.relation.Relation;
@@ -44,19 +45,16 @@ public abstract class AbstractDBIDSimilarityQuery<O, D extends Distance<D>> exte
super(relation);
}
- @SuppressWarnings("unused")
@Override
public D similarity(O o1, DBID id2) {
throw new UnsupportedOperationException("This distance function can only be used for objects when referenced by ID.");
}
- @SuppressWarnings("unused")
@Override
public D similarity(DBID id1, O o2) {
throw new UnsupportedOperationException("This distance function can only be used for objects when referenced by ID.");
}
- @SuppressWarnings("unused")
@Override
public D similarity(O o1, O o2) {
throw new UnsupportedOperationException("This distance function can only be used for objects when referenced by ID.");
diff --git a/src/de/lmu/ifi/dbs/elki/database/query/similarity/AbstractSimilarityQuery.java b/src/de/lmu/ifi/dbs/elki/database/query/similarity/AbstractSimilarityQuery.java
index 4deb819d..3dba474e 100644
--- a/src/de/lmu/ifi/dbs/elki/database/query/similarity/AbstractSimilarityQuery.java
+++ b/src/de/lmu/ifi/dbs/elki/database/query/similarity/AbstractSimilarityQuery.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.database.query.similarity;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.database.ids.DBID;
import de.lmu.ifi.dbs.elki.database.query.AbstractDataBasedQuery;
diff --git a/src/de/lmu/ifi/dbs/elki/database/query/similarity/PrimitiveSimilarityQuery.java b/src/de/lmu/ifi/dbs/elki/database/query/similarity/PrimitiveSimilarityQuery.java
index f09fe9e8..71dc0c4a 100644
--- a/src/de/lmu/ifi/dbs/elki/database/query/similarity/PrimitiveSimilarityQuery.java
+++ b/src/de/lmu/ifi/dbs/elki/database/query/similarity/PrimitiveSimilarityQuery.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.database.query.similarity;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.database.ids.DBID;
import de.lmu.ifi.dbs.elki.database.relation.Relation;
diff --git a/src/de/lmu/ifi/dbs/elki/database/query/similarity/SimilarityQuery.java b/src/de/lmu/ifi/dbs/elki/database/query/similarity/SimilarityQuery.java
index 8ace9f3d..91d7b84b 100644
--- a/src/de/lmu/ifi/dbs/elki/database/query/similarity/SimilarityQuery.java
+++ b/src/de/lmu/ifi/dbs/elki/database/query/similarity/SimilarityQuery.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.database.query.similarity;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.database.ids.DBID;
import de.lmu.ifi.dbs.elki.database.query.DatabaseQuery;
diff --git a/src/de/lmu/ifi/dbs/elki/database/relation/ConvertToStringView.java b/src/de/lmu/ifi/dbs/elki/database/relation/ConvertToStringView.java
index ac3cf82f..55015fa9 100644
--- a/src/de/lmu/ifi/dbs/elki/database/relation/ConvertToStringView.java
+++ b/src/de/lmu/ifi/dbs/elki/database/relation/ConvertToStringView.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.database.relation;
-/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.data.type.SimpleTypeInformation;
import de.lmu.ifi.dbs.elki.data.type.TypeUtil;
@@ -62,13 +63,11 @@ public class ConvertToStringView extends AbstractHierarchicalResult implements R
return existing.get(id).toString();
}
- @SuppressWarnings("unused")
@Override
public void set(DBID id, String val) {
throw new UnsupportedOperationException("Covnersion representations are not writable!");
}
- @SuppressWarnings("unused")
@Override
public void delete(DBID id) {
throw new UnsupportedOperationException("Covnersion representations are not writable!");
diff --git a/src/de/lmu/ifi/dbs/elki/database/relation/DBIDView.java b/src/de/lmu/ifi/dbs/elki/database/relation/DBIDView.java
index 7f2ed2a7..72b278a6 100644
--- a/src/de/lmu/ifi/dbs/elki/database/relation/DBIDView.java
+++ b/src/de/lmu/ifi/dbs/elki/database/relation/DBIDView.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.database.relation;
-/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.data.type.SimpleTypeInformation;
import de.lmu.ifi.dbs.elki.data.type.TypeUtil;
@@ -72,7 +73,6 @@ public class DBIDView extends AbstractHierarchicalResult implements Relation<DBI
return id;
}
- @SuppressWarnings("unused")
@Override
public void set(DBID id, DBID val) {
throw new UnsupportedOperationException("DBIDs cannot be changed.");
diff --git a/src/de/lmu/ifi/dbs/elki/database/relation/MaterializedRelation.java b/src/de/lmu/ifi/dbs/elki/database/relation/MaterializedRelation.java
index 45653a10..14aa54ea 100644
--- a/src/de/lmu/ifi/dbs/elki/database/relation/MaterializedRelation.java
+++ b/src/de/lmu/ifi/dbs/elki/database/relation/MaterializedRelation.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.database.relation;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.data.type.SimpleTypeInformation;
import de.lmu.ifi.dbs.elki.database.Database;
diff --git a/src/de/lmu/ifi/dbs/elki/database/relation/ProxyView.java b/src/de/lmu/ifi/dbs/elki/database/relation/ProxyView.java
index 6f4a1031..e7a6396f 100644
--- a/src/de/lmu/ifi/dbs/elki/database/relation/ProxyView.java
+++ b/src/de/lmu/ifi/dbs/elki/database/relation/ProxyView.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.database.relation;
-/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.data.type.SimpleTypeInformation;
import de.lmu.ifi.dbs.elki.database.Database;
@@ -98,7 +99,7 @@ public class ProxyView<O> extends AbstractHierarchicalResult implements Relation
}
@Override
- public void delete(@SuppressWarnings("unused") DBID id) {
+ public void delete(DBID id) {
throw new UnsupportedOperationException("Semantics of 'delete-from-virtual-partition' are not uniquely defined. Delete from IDs or from underlying data, please!");
}
diff --git a/src/de/lmu/ifi/dbs/elki/database/relation/Relation.java b/src/de/lmu/ifi/dbs/elki/database/relation/Relation.java
index ea2def2c..75f91aa7 100644
--- a/src/de/lmu/ifi/dbs/elki/database/relation/Relation.java
+++ b/src/de/lmu/ifi/dbs/elki/database/relation/Relation.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.database.relation;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.data.type.SimpleTypeInformation;
import de.lmu.ifi.dbs.elki.database.Database;
diff --git a/src/de/lmu/ifi/dbs/elki/datasource/AbstractDatabaseConnection.java b/src/de/lmu/ifi/dbs/elki/datasource/AbstractDatabaseConnection.java
index f2af32bb..aa90c74b 100644
--- a/src/de/lmu/ifi/dbs/elki/datasource/AbstractDatabaseConnection.java
+++ b/src/de/lmu/ifi/dbs/elki/datasource/AbstractDatabaseConnection.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.datasource;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.List;
diff --git a/src/de/lmu/ifi/dbs/elki/datasource/DatabaseConnection.java b/src/de/lmu/ifi/dbs/elki/datasource/DatabaseConnection.java
index ff93a8a5..2900ab17 100644
--- a/src/de/lmu/ifi/dbs/elki/datasource/DatabaseConnection.java
+++ b/src/de/lmu/ifi/dbs/elki/datasource/DatabaseConnection.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.datasource;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.datasource.bundle.MultipleObjectsBundle;
import de.lmu.ifi.dbs.elki.utilities.optionhandling.Parameterizable;
diff --git a/src/de/lmu/ifi/dbs/elki/datasource/EmptyDatabaseConnection.java b/src/de/lmu/ifi/dbs/elki/datasource/EmptyDatabaseConnection.java
index 5049e86e..1b04bafb 100644
--- a/src/de/lmu/ifi/dbs/elki/datasource/EmptyDatabaseConnection.java
+++ b/src/de/lmu/ifi/dbs/elki/datasource/EmptyDatabaseConnection.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.datasource;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.datasource.bundle.MultipleObjectsBundle;
import de.lmu.ifi.dbs.elki.logging.Logging;
diff --git a/src/de/lmu/ifi/dbs/elki/datasource/ExternalIDJoinDatabaseConnection.java b/src/de/lmu/ifi/dbs/elki/datasource/ExternalIDJoinDatabaseConnection.java
index 52c5134a..9bad2941 100644
--- a/src/de/lmu/ifi/dbs/elki/datasource/ExternalIDJoinDatabaseConnection.java
+++ b/src/de/lmu/ifi/dbs/elki/datasource/ExternalIDJoinDatabaseConnection.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.datasource;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.ArrayList;
import java.util.HashMap;
diff --git a/src/de/lmu/ifi/dbs/elki/datasource/FileBasedDatabaseConnection.java b/src/de/lmu/ifi/dbs/elki/datasource/FileBasedDatabaseConnection.java
index 0549fbab..168a85e4 100644
--- a/src/de/lmu/ifi/dbs/elki/datasource/FileBasedDatabaseConnection.java
+++ b/src/de/lmu/ifi/dbs/elki/datasource/FileBasedDatabaseConnection.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.datasource;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.io.FileInputStream;
import java.io.IOException;
diff --git a/src/de/lmu/ifi/dbs/elki/datasource/InputStreamDatabaseConnection.java b/src/de/lmu/ifi/dbs/elki/datasource/InputStreamDatabaseConnection.java
index a54630c4..d42f1eb8 100644
--- a/src/de/lmu/ifi/dbs/elki/datasource/InputStreamDatabaseConnection.java
+++ b/src/de/lmu/ifi/dbs/elki/datasource/InputStreamDatabaseConnection.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.datasource;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.io.InputStream;
import java.util.List;
diff --git a/src/de/lmu/ifi/dbs/elki/datasource/LabelJoinDatabaseConnection.java b/src/de/lmu/ifi/dbs/elki/datasource/LabelJoinDatabaseConnection.java
index da242657..b91ccb80 100644
--- a/src/de/lmu/ifi/dbs/elki/datasource/LabelJoinDatabaseConnection.java
+++ b/src/de/lmu/ifi/dbs/elki/datasource/LabelJoinDatabaseConnection.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.datasource;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.ArrayList;
import java.util.HashMap;
diff --git a/src/de/lmu/ifi/dbs/elki/datasource/RandomDoubleVectorDatabaseConnection.java b/src/de/lmu/ifi/dbs/elki/datasource/RandomDoubleVectorDatabaseConnection.java
index 65da29f0..e0437869 100644
--- a/src/de/lmu/ifi/dbs/elki/datasource/RandomDoubleVectorDatabaseConnection.java
+++ b/src/de/lmu/ifi/dbs/elki/datasource/RandomDoubleVectorDatabaseConnection.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.datasource;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.ArrayList;
import java.util.List;
diff --git a/src/de/lmu/ifi/dbs/elki/datasource/bundle/BundleMeta.java b/src/de/lmu/ifi/dbs/elki/datasource/bundle/BundleMeta.java
index 9a75ca0e..04934e8e 100644
--- a/src/de/lmu/ifi/dbs/elki/datasource/bundle/BundleMeta.java
+++ b/src/de/lmu/ifi/dbs/elki/datasource/bundle/BundleMeta.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.datasource.bundle;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.ArrayList;
import java.util.Arrays;
diff --git a/src/de/lmu/ifi/dbs/elki/datasource/bundle/MultipleObjectsBundle.java b/src/de/lmu/ifi/dbs/elki/datasource/bundle/MultipleObjectsBundle.java
index 0ee71c75..cb78ed84 100644
--- a/src/de/lmu/ifi/dbs/elki/datasource/bundle/MultipleObjectsBundle.java
+++ b/src/de/lmu/ifi/dbs/elki/datasource/bundle/MultipleObjectsBundle.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.datasource.bundle;
-/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.ArrayList;
import java.util.List;
@@ -136,10 +137,12 @@ public class MultipleObjectsBundle implements ObjectBundle {
*
* @param type Type information
* @param data Data to add
+ * @return This object, for chaining.
*/
- public void appendColumn(SimpleTypeInformation<?> type, List<?> data) {
+ public MultipleObjectsBundle appendColumn(SimpleTypeInformation<?> type, List<?> data) {
meta.add(type);
columns.add(data);
+ return this;
}
/**
@@ -183,6 +186,27 @@ public class MultipleObjectsBundle implements ObjectBundle {
}
/**
+ * Helper to add a single column to the bundle.
+ *
+ * @param <V1> First Object type
+ * @param <V2> Second Object type
+ * @param <V3> Third Object type
+ * @param type1 First type information
+ * @param data1 First data column to add
+ * @param type2 Second type information
+ * @param data2 Second data column to add
+ * @param type3 Third type information
+ * @param data3 Third data column to add
+ */
+ public static <V1, V2, V3> MultipleObjectsBundle makeSimple(SimpleTypeInformation<? super V1> type1, List<? extends V1> data1, SimpleTypeInformation<? super V2> type2, List<? extends V2> data2, SimpleTypeInformation<? super V3> type3, List<? extends V3> data3) {
+ MultipleObjectsBundle bundle = new MultipleObjectsBundle();
+ bundle.appendColumn(type1, data1);
+ bundle.appendColumn(type2, data2);
+ bundle.appendColumn(type3, data3);
+ return bundle;
+ }
+
+ /**
* Get an object row.
*
* @param row Row number
diff --git a/src/de/lmu/ifi/dbs/elki/datasource/bundle/ObjectBundle.java b/src/de/lmu/ifi/dbs/elki/datasource/bundle/ObjectBundle.java
index 7559c15c..2cb29ed1 100644
--- a/src/de/lmu/ifi/dbs/elki/datasource/bundle/ObjectBundle.java
+++ b/src/de/lmu/ifi/dbs/elki/datasource/bundle/ObjectBundle.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.datasource.bundle;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.data.type.SimpleTypeInformation;
diff --git a/src/de/lmu/ifi/dbs/elki/datasource/bundle/SingleObjectBundle.java b/src/de/lmu/ifi/dbs/elki/datasource/bundle/SingleObjectBundle.java
index 7353e8b4..493aa53e 100644
--- a/src/de/lmu/ifi/dbs/elki/datasource/bundle/SingleObjectBundle.java
+++ b/src/de/lmu/ifi/dbs/elki/datasource/bundle/SingleObjectBundle.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.datasource.bundle;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.ArrayList;
import java.util.List;
diff --git a/src/de/lmu/ifi/dbs/elki/datasource/filter/AbstractConversionFilter.java b/src/de/lmu/ifi/dbs/elki/datasource/filter/AbstractConversionFilter.java
index 93065f0d..990458bf 100644
--- a/src/de/lmu/ifi/dbs/elki/datasource/filter/AbstractConversionFilter.java
+++ b/src/de/lmu/ifi/dbs/elki/datasource/filter/AbstractConversionFilter.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.datasource.filter;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.List;
diff --git a/src/de/lmu/ifi/dbs/elki/datasource/filter/AbstractFeatureSelectionFilter.java b/src/de/lmu/ifi/dbs/elki/datasource/filter/AbstractFeatureSelectionFilter.java
index 8180465d..d53dfb94 100644
--- a/src/de/lmu/ifi/dbs/elki/datasource/filter/AbstractFeatureSelectionFilter.java
+++ b/src/de/lmu/ifi/dbs/elki/datasource/filter/AbstractFeatureSelectionFilter.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.datasource.filter;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.BitSet;
import java.util.List;
diff --git a/src/de/lmu/ifi/dbs/elki/datasource/filter/AbstractNormalization.java b/src/de/lmu/ifi/dbs/elki/datasource/filter/AbstractNormalization.java
index 4756595a..ae75a979 100644
--- a/src/de/lmu/ifi/dbs/elki/datasource/filter/AbstractNormalization.java
+++ b/src/de/lmu/ifi/dbs/elki/datasource/filter/AbstractNormalization.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.datasource.filter;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.data.type.SimpleTypeInformation;
import de.lmu.ifi.dbs.elki.datasource.bundle.MultipleObjectsBundle;
@@ -51,7 +52,6 @@ public abstract class AbstractNormalization<O> extends AbstractConversionFilter<
return normalizeObjects(objects);
}
- @SuppressWarnings("unused")
@Override
public LinearEquationSystem transform(LinearEquationSystem linearEquationSystem) {
// FIXME: implement.
diff --git a/src/de/lmu/ifi/dbs/elki/datasource/filter/AbstractRandomFeatureSelectionFilter.java b/src/de/lmu/ifi/dbs/elki/datasource/filter/AbstractRandomFeatureSelectionFilter.java
index c546ee96..975d5bd5 100644
--- a/src/de/lmu/ifi/dbs/elki/datasource/filter/AbstractRandomFeatureSelectionFilter.java
+++ b/src/de/lmu/ifi/dbs/elki/datasource/filter/AbstractRandomFeatureSelectionFilter.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.datasource.filter;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.BitSet;
import java.util.Random;
diff --git a/src/de/lmu/ifi/dbs/elki/datasource/filter/AttributeWiseErfNormalization.java b/src/de/lmu/ifi/dbs/elki/datasource/filter/AttributeWiseErfNormalization.java
index f3fe64bb..e2f99d35 100644
--- a/src/de/lmu/ifi/dbs/elki/datasource/filter/AttributeWiseErfNormalization.java
+++ b/src/de/lmu/ifi/dbs/elki/datasource/filter/AttributeWiseErfNormalization.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.datasource.filter;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.data.NumberVector;
import de.lmu.ifi.dbs.elki.data.type.SimpleTypeInformation;
@@ -43,7 +44,6 @@ public class AttributeWiseErfNormalization<O extends NumberVector<O, ?>> extends
super();
}
- @SuppressWarnings("unused")
@Override
public O restore(O featureVector) throws NonNumericFeaturesException {
throw new UnsupportedOperationException("Not implemented yet.");
diff --git a/src/de/lmu/ifi/dbs/elki/datasource/filter/AttributeWiseMinMaxNormalization.java b/src/de/lmu/ifi/dbs/elki/datasource/filter/AttributeWiseMinMaxNormalization.java
index cee0d604..f2fe02c0 100644
--- a/src/de/lmu/ifi/dbs/elki/datasource/filter/AttributeWiseMinMaxNormalization.java
+++ b/src/de/lmu/ifi/dbs/elki/datasource/filter/AttributeWiseMinMaxNormalization.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.datasource.filter;
-/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.ArrayList;
import java.util.List;
@@ -82,7 +83,7 @@ public class AttributeWiseMinMaxNormalization<V extends NumberVector<V, ?>> exte
}
@Override
- protected boolean prepareStart(@SuppressWarnings("unused") SimpleTypeInformation<V> in) {
+ protected boolean prepareStart(SimpleTypeInformation<V> in) {
return (minima.length == 0 || maxima.length == 0);
}
diff --git a/src/de/lmu/ifi/dbs/elki/datasource/filter/AttributeWiseVarianceNormalization.java b/src/de/lmu/ifi/dbs/elki/datasource/filter/AttributeWiseVarianceNormalization.java
index b8f9f6e9..837f3ec5 100644
--- a/src/de/lmu/ifi/dbs/elki/datasource/filter/AttributeWiseVarianceNormalization.java
+++ b/src/de/lmu/ifi/dbs/elki/datasource/filter/AttributeWiseVarianceNormalization.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.datasource.filter;
-/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.ArrayList;
import java.util.List;
@@ -95,7 +96,7 @@ public class AttributeWiseVarianceNormalization<V extends NumberVector<V, ?>> ex
}
@Override
- protected boolean prepareStart(@SuppressWarnings("unused") SimpleTypeInformation<V> in) {
+ protected boolean prepareStart(SimpleTypeInformation<V> in) {
return (mean.length == 0 || stddev.length == 0);
}
diff --git a/src/de/lmu/ifi/dbs/elki/datasource/filter/ClassLabelFilter.java b/src/de/lmu/ifi/dbs/elki/datasource/filter/ClassLabelFilter.java
index b255a556..ce79d612 100644
--- a/src/de/lmu/ifi/dbs/elki/datasource/filter/ClassLabelFilter.java
+++ b/src/de/lmu/ifi/dbs/elki/datasource/filter/ClassLabelFilter.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.datasource.filter;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.ArrayList;
import java.util.List;
diff --git a/src/de/lmu/ifi/dbs/elki/datasource/filter/DoubleVectorProjectionFilter.java b/src/de/lmu/ifi/dbs/elki/datasource/filter/DoubleVectorProjectionFilter.java
index 7959cc81..d7aaf843 100644
--- a/src/de/lmu/ifi/dbs/elki/datasource/filter/DoubleVectorProjectionFilter.java
+++ b/src/de/lmu/ifi/dbs/elki/datasource/filter/DoubleVectorProjectionFilter.java
@@ -57,7 +57,6 @@ public class DoubleVectorProjectionFilter extends AbstractFeatureSelectionFilter
return TypeUtil.DOUBLE_VECTOR_FIELD;
}
- @SuppressWarnings("unused")
@Override
protected SimpleTypeInformation<? super DoubleVector> convertedType(SimpleTypeInformation<DoubleVector> in) {
return new VectorFieldTypeInformation<DoubleVector>(DoubleVector.class, getDimensionality(), new DoubleVector(new double[getDimensionality()]));
diff --git a/src/de/lmu/ifi/dbs/elki/datasource/filter/DoubleVectorRandomProjectionFilter.java b/src/de/lmu/ifi/dbs/elki/datasource/filter/DoubleVectorRandomProjectionFilter.java
index 3c8e2137..1fe7c1a9 100644
--- a/src/de/lmu/ifi/dbs/elki/datasource/filter/DoubleVectorRandomProjectionFilter.java
+++ b/src/de/lmu/ifi/dbs/elki/datasource/filter/DoubleVectorRandomProjectionFilter.java
@@ -57,7 +57,6 @@ public class DoubleVectorRandomProjectionFilter extends AbstractRandomFeatureSel
return TypeUtil.DOUBLE_VECTOR_FIELD;
}
- @SuppressWarnings("unused")
@Override
protected SimpleTypeInformation<? super DoubleVector> convertedType(SimpleTypeInformation<DoubleVector> in) {
return new VectorFieldTypeInformation<DoubleVector>(DoubleVector.class, k, new DoubleVector(new double[k]));
diff --git a/src/de/lmu/ifi/dbs/elki/datasource/filter/ExternalIDFilter.java b/src/de/lmu/ifi/dbs/elki/datasource/filter/ExternalIDFilter.java
index 1908b352..16933d4d 100644
--- a/src/de/lmu/ifi/dbs/elki/datasource/filter/ExternalIDFilter.java
+++ b/src/de/lmu/ifi/dbs/elki/datasource/filter/ExternalIDFilter.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.datasource.filter;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.ArrayList;
import java.util.List;
diff --git a/src/de/lmu/ifi/dbs/elki/datasource/filter/FilterByLabelFilter.java b/src/de/lmu/ifi/dbs/elki/datasource/filter/FilterByLabelFilter.java
index 55532337..58c1d509 100644
--- a/src/de/lmu/ifi/dbs/elki/datasource/filter/FilterByLabelFilter.java
+++ b/src/de/lmu/ifi/dbs/elki/datasource/filter/FilterByLabelFilter.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.datasource.filter;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.ArrayList;
import java.util.regex.Pattern;
diff --git a/src/de/lmu/ifi/dbs/elki/datasource/filter/FilterNoMissingValuesFilter.java b/src/de/lmu/ifi/dbs/elki/datasource/filter/FilterNoMissingValuesFilter.java
index 3ba01906..ceb671df 100644
--- a/src/de/lmu/ifi/dbs/elki/datasource/filter/FilterNoMissingValuesFilter.java
+++ b/src/de/lmu/ifi/dbs/elki/datasource/filter/FilterNoMissingValuesFilter.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.datasource.filter;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.ArrayList;
diff --git a/src/de/lmu/ifi/dbs/elki/datasource/filter/FixedDBIDsFilter.java b/src/de/lmu/ifi/dbs/elki/datasource/filter/FixedDBIDsFilter.java
index 9e0c9c6c..eda4b9ee 100644
--- a/src/de/lmu/ifi/dbs/elki/datasource/filter/FixedDBIDsFilter.java
+++ b/src/de/lmu/ifi/dbs/elki/datasource/filter/FixedDBIDsFilter.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.datasource.filter;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.ArrayList;
import java.util.List;
diff --git a/src/de/lmu/ifi/dbs/elki/datasource/filter/InverseDocumentFrequencyNormalization.java b/src/de/lmu/ifi/dbs/elki/datasource/filter/InverseDocumentFrequencyNormalization.java
index 3953a9f2..3b6e69c0 100644
--- a/src/de/lmu/ifi/dbs/elki/datasource/filter/InverseDocumentFrequencyNormalization.java
+++ b/src/de/lmu/ifi/dbs/elki/datasource/filter/InverseDocumentFrequencyNormalization.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.datasource.filter;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.BitSet;
import java.util.HashMap;
@@ -56,7 +57,7 @@ public class InverseDocumentFrequencyNormalization extends AbstractNormalization
}
@Override
- protected boolean prepareStart(@SuppressWarnings("unused") SimpleTypeInformation<SparseFloatVector> in) {
+ protected boolean prepareStart(SimpleTypeInformation<SparseFloatVector> in) {
if(idf.size() > 0) {
throw new UnsupportedOperationException("This normalization may only be used once!");
}
diff --git a/src/de/lmu/ifi/dbs/elki/datasource/filter/NoOpFilter.java b/src/de/lmu/ifi/dbs/elki/datasource/filter/NoOpFilter.java
index 5c5d22da..9275c3c2 100644
--- a/src/de/lmu/ifi/dbs/elki/datasource/filter/NoOpFilter.java
+++ b/src/de/lmu/ifi/dbs/elki/datasource/filter/NoOpFilter.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.datasource.filter;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.datasource.bundle.MultipleObjectsBundle;
diff --git a/src/de/lmu/ifi/dbs/elki/datasource/filter/NonNumericFeaturesException.java b/src/de/lmu/ifi/dbs/elki/datasource/filter/NonNumericFeaturesException.java
index 1a5929f4..3206518d 100644
--- a/src/de/lmu/ifi/dbs/elki/datasource/filter/NonNumericFeaturesException.java
+++ b/src/de/lmu/ifi/dbs/elki/datasource/filter/NonNumericFeaturesException.java
@@ -1,26 +1,28 @@
package de.lmu.ifi.dbs.elki.datasource.filter;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
/**
* An exception to signal the encounter of non numeric features where numeric
diff --git a/src/de/lmu/ifi/dbs/elki/datasource/filter/Normalization.java b/src/de/lmu/ifi/dbs/elki/datasource/filter/Normalization.java
index 56bd6f71..c21c7603 100644
--- a/src/de/lmu/ifi/dbs/elki/datasource/filter/Normalization.java
+++ b/src/de/lmu/ifi/dbs/elki/datasource/filter/Normalization.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.datasource.filter;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.datasource.bundle.MultipleObjectsBundle;
import de.lmu.ifi.dbs.elki.math.linearalgebra.LinearEquationSystem;
diff --git a/src/de/lmu/ifi/dbs/elki/datasource/filter/ObjectFilter.java b/src/de/lmu/ifi/dbs/elki/datasource/filter/ObjectFilter.java
index 64da1308..1d5c2ba9 100644
--- a/src/de/lmu/ifi/dbs/elki/datasource/filter/ObjectFilter.java
+++ b/src/de/lmu/ifi/dbs/elki/datasource/filter/ObjectFilter.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.datasource.filter;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.datasource.bundle.MultipleObjectsBundle;
diff --git a/src/de/lmu/ifi/dbs/elki/datasource/filter/ShuffleObjectsFilter.java b/src/de/lmu/ifi/dbs/elki/datasource/filter/ShuffleObjectsFilter.java
index cf819736..6618721f 100644
--- a/src/de/lmu/ifi/dbs/elki/datasource/filter/ShuffleObjectsFilter.java
+++ b/src/de/lmu/ifi/dbs/elki/datasource/filter/ShuffleObjectsFilter.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.datasource.filter;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.ArrayList;
import java.util.List;
diff --git a/src/de/lmu/ifi/dbs/elki/datasource/filter/SortByLabelFilter.java b/src/de/lmu/ifi/dbs/elki/datasource/filter/SortByLabelFilter.java
index c96fe35a..0f633ad3 100644
--- a/src/de/lmu/ifi/dbs/elki/datasource/filter/SortByLabelFilter.java
+++ b/src/de/lmu/ifi/dbs/elki/datasource/filter/SortByLabelFilter.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.datasource.filter;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.ArrayList;
import java.util.Arrays;
diff --git a/src/de/lmu/ifi/dbs/elki/datasource/filter/SparseFloatVectorProjectionFilter.java b/src/de/lmu/ifi/dbs/elki/datasource/filter/SparseFloatVectorProjectionFilter.java
index b475b495..7bbbab2d 100644
--- a/src/de/lmu/ifi/dbs/elki/datasource/filter/SparseFloatVectorProjectionFilter.java
+++ b/src/de/lmu/ifi/dbs/elki/datasource/filter/SparseFloatVectorProjectionFilter.java
@@ -62,7 +62,6 @@ public class SparseFloatVectorProjectionFilter extends AbstractFeatureSelectionF
return TypeUtil.SPARSE_FLOAT_FIELD;
}
- @SuppressWarnings("unused")
@Override
protected SimpleTypeInformation<? super SparseFloatVector> convertedType(SimpleTypeInformation<SparseFloatVector> in) {
final Map<Integer, Float> emptyMap = Collections.emptyMap();
diff --git a/src/de/lmu/ifi/dbs/elki/datasource/filter/SparseFloatVectorRandomProjectionFilter.java b/src/de/lmu/ifi/dbs/elki/datasource/filter/SparseFloatVectorRandomProjectionFilter.java
index 8b09967b..f8e999b9 100644
--- a/src/de/lmu/ifi/dbs/elki/datasource/filter/SparseFloatVectorRandomProjectionFilter.java
+++ b/src/de/lmu/ifi/dbs/elki/datasource/filter/SparseFloatVectorRandomProjectionFilter.java
@@ -58,7 +58,6 @@ public class SparseFloatVectorRandomProjectionFilter extends AbstractRandomFeatu
return TypeUtil.SPARSE_FLOAT_FIELD;
}
- @SuppressWarnings("unused")
@Override
protected SimpleTypeInformation<? super SparseFloatVector> convertedType(SimpleTypeInformation<SparseFloatVector> in) {
final Map<Integer, Float> emptyMap = Collections.emptyMap();
diff --git a/src/de/lmu/ifi/dbs/elki/datasource/filter/SplitNumberVectorFilter.java b/src/de/lmu/ifi/dbs/elki/datasource/filter/SplitNumberVectorFilter.java
index 63ea1817..0ad8b5cc 100644
--- a/src/de/lmu/ifi/dbs/elki/datasource/filter/SplitNumberVectorFilter.java
+++ b/src/de/lmu/ifi/dbs/elki/datasource/filter/SplitNumberVectorFilter.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.datasource.filter;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.ArrayList;
import java.util.List;
diff --git a/src/de/lmu/ifi/dbs/elki/datasource/filter/TFIDFNormalization.java b/src/de/lmu/ifi/dbs/elki/datasource/filter/TFIDFNormalization.java
index 35d6b6db..65fab4cb 100644
--- a/src/de/lmu/ifi/dbs/elki/datasource/filter/TFIDFNormalization.java
+++ b/src/de/lmu/ifi/dbs/elki/datasource/filter/TFIDFNormalization.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.datasource.filter;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.BitSet;
import java.util.HashMap;
diff --git a/src/de/lmu/ifi/dbs/elki/datasource/parser/AbstractParser.java b/src/de/lmu/ifi/dbs/elki/datasource/parser/AbstractParser.java
index 3e3ff954..e3bd77a0 100644
--- a/src/de/lmu/ifi/dbs/elki/datasource/parser/AbstractParser.java
+++ b/src/de/lmu/ifi/dbs/elki/datasource/parser/AbstractParser.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.datasource.parser;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.ArrayList;
import java.util.List;
diff --git a/src/de/lmu/ifi/dbs/elki/datasource/parser/ArffParser.java b/src/de/lmu/ifi/dbs/elki/datasource/parser/ArffParser.java
new file mode 100644
index 00000000..9710b493
--- /dev/null
+++ b/src/de/lmu/ifi/dbs/elki/datasource/parser/ArffParser.java
@@ -0,0 +1,371 @@
+package de.lmu.ifi.dbs.elki.datasource.parser;
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
+
+import java.io.BufferedReader;
+import java.io.IOException;
+import java.io.InputStream;
+import java.io.InputStreamReader;
+import java.io.StreamTokenizer;
+import java.util.ArrayList;
+import java.util.regex.Matcher;
+import java.util.regex.Pattern;
+
+import de.lmu.ifi.dbs.elki.data.ClassLabel;
+import de.lmu.ifi.dbs.elki.data.DoubleVector;
+import de.lmu.ifi.dbs.elki.data.ExternalID;
+import de.lmu.ifi.dbs.elki.data.LabelList;
+import de.lmu.ifi.dbs.elki.data.SimpleClassLabel;
+import de.lmu.ifi.dbs.elki.data.type.SimpleTypeInformation;
+import de.lmu.ifi.dbs.elki.data.type.TypeInformation;
+import de.lmu.ifi.dbs.elki.data.type.TypeUtil;
+import de.lmu.ifi.dbs.elki.data.type.VectorFieldTypeInformation;
+import de.lmu.ifi.dbs.elki.datasource.bundle.MultipleObjectsBundle;
+import de.lmu.ifi.dbs.elki.logging.Logging;
+import de.lmu.ifi.dbs.elki.utilities.exceptions.AbortException;
+
+/**
+ * Parser to load WEKA .arff files into ELKI.
+ *
+ * This parser is quite hackish, and contains lots of not yet configurable
+ * magic.
+ *
+ * TODO: Sparse vectors are not yet supported.
+ *
+ * @author Erich Schubert
+ */
+public class ArffParser implements Parser {
+ /**
+ * Logger
+ */
+ private static final Logging logger = Logging.getLogger(ArffParser.class);
+
+ /**
+ * Arff file marker
+ */
+ public static final Pattern ARFF_HEADER_RELATION = Pattern.compile("@relation\\s+(.*)", Pattern.CASE_INSENSITIVE);
+
+ /**
+ * Arff attribute declaration marker
+ */
+ public static final Pattern ARFF_HEADER_ATTRIBUTE = Pattern.compile("@attribute\\s+([^ ]+|['\"].*?['\"])\\s+(numeric|real|integer|string|double|date(\\s.*)|\\{.*\\})\\s*", Pattern.CASE_INSENSITIVE);
+
+ /**
+ * Arff data marker
+ */
+ public static final Pattern ARFF_HEADER_DATA = Pattern.compile("@data\\s*", Pattern.CASE_INSENSITIVE);
+
+ /**
+ * Comment pattern.
+ */
+ public static final Pattern ARFF_COMMENT = Pattern.compile("^\\s*%.*");
+
+ /**
+ * Pattern to auto-convert columns to external ids.
+ */
+ public static final Pattern ARFF_MAGIC_EID = Pattern.compile("(ID|External-?ID)", Pattern.CASE_INSENSITIVE);
+
+ /**
+ * Pattern to auto-convert columns to class labels.
+ */
+ public static final Pattern ARFF_MAGIC_CLASS = Pattern.compile("(Class|Class-?Label)", Pattern.CASE_INSENSITIVE);
+
+ /**
+ * Pattern for numeric columns
+ */
+ public static final Pattern ARFF_NUMERIC = Pattern.compile("(numeric|real|integer|double)", Pattern.CASE_INSENSITIVE);
+
+ /**
+ * Empty line pattern.
+ */
+ public static final Pattern EMPTY = Pattern.compile("^\\s*$");
+
+ @Override
+ public MultipleObjectsBundle parse(InputStream instream) {
+ try {
+ BufferedReader br = new BufferedReader(new InputStreamReader(instream));
+ String line;
+ // Locate header line
+ while(true) {
+ line = br.readLine();
+ if(line == null) {
+ throw new AbortException(ARFF_HEADER_RELATION + " not found in file.");
+ }
+ // Skip comments and empty lines
+ if(ARFF_COMMENT.matcher(line).matches() || EMPTY.matcher(line).matches()) {
+ continue;
+ }
+ // Break on relation statement
+ if(ARFF_HEADER_RELATION.matcher(line).matches()) {
+ break;
+ }
+ throw new AbortException("Expected relation declaration: " + line);
+ }
+ ArrayList<String> names = new ArrayList<String>();
+ ArrayList<String> types = new ArrayList<String>();
+ // Load attribute metadata
+ while(true) {
+ line = br.readLine();
+ if(line == null) {
+ throw new AbortException(ARFF_HEADER_DATA + " not found in file.");
+ }
+ // Skip comments and empty lines
+ if(ARFF_COMMENT.matcher(line).matches() || EMPTY.matcher(line).matches()) {
+ continue;
+ }
+ // Break on data statement to continue
+ if(ARFF_HEADER_DATA.matcher(line).matches()) {
+ break;
+ }
+ // Expect an attribute specification
+ Matcher matcher = ARFF_HEADER_ATTRIBUTE.matcher(line);
+ if(matcher.matches()) {
+ String name = matcher.group(1);
+ if(name.charAt(0) == '\'' && name.charAt(name.length() - 1) == '\'') {
+ name = name.substring(1, name.length() - 1);
+ }
+ else if(name.charAt(0) == '"' && name.charAt(name.length() - 1) == '"') {
+ name = name.substring(1, name.length() - 1);
+ }
+ String type = matcher.group(2);
+ names.add(name);
+ types.add(type);
+ // logger.warning("Attribute name: " + name + " type: " + type);
+ continue;
+ }
+ throw new AbortException("Unrecognized line: " + line);
+ }
+ assert (names.size() == types.size());
+
+ int[] targ = new int[names.size()];
+ TypeInformation[] etyp = new TypeInformation[names.size()];
+ int[] dims = new int[names.size()];
+
+ int next = 0;
+ for(int i = 0; i < targ.length; i++) {
+ // Turn into an external ID column.
+ if(ARFF_MAGIC_EID.matcher(names.get(i)).matches()) {
+ targ[i] = next;
+ etyp[next] = TypeUtil.EXTERNALID;
+ dims[next] = 1;
+ next++;
+ continue;
+ }
+ else if(ARFF_MAGIC_CLASS.matcher(names.get(i)).matches()) {
+ targ[i] = next;
+ etyp[next] = TypeUtil.CLASSLABEL;
+ dims[next] = 1;
+ next++;
+ continue;
+ }
+ else if(ARFF_NUMERIC.matcher(types.get(i)).matches()) {
+ if(next > 0 && etyp[next - 1] == TypeUtil.NUMBER_VECTOR_FIELD) {
+ targ[i] = next - 1;
+ dims[next - 1]++;
+ continue;
+ }
+ else {
+ targ[i] = next;
+ etyp[next] = TypeUtil.NUMBER_VECTOR_FIELD;
+ dims[next] = 1;
+ next++;
+ continue;
+ }
+ }
+ else {
+ if(next > 0 && etyp[next - 1] == TypeUtil.LABELLIST) {
+ targ[i] = next - 1;
+ dims[next - 1]++;
+ continue;
+ }
+ else {
+ targ[i] = next;
+ etyp[next] = TypeUtil.LABELLIST;
+ dims[next] = 1;
+ next++;
+ continue;
+ }
+ }
+ }
+
+ // Prepare bundle:
+ // This is a bit complicated to produce vector fields.
+ MultipleObjectsBundle bundle = new MultipleObjectsBundle();
+ for(int in = 0, out = 0; in < targ.length; out++) {
+ int nin = in + 1;
+ for(; nin < targ.length; nin++) {
+ if(targ[nin] != targ[in]) {
+ break;
+ }
+ }
+ if(etyp[out] == TypeUtil.NUMBER_VECTOR_FIELD) {
+ String[] labels = new String[dims[out]];
+ // Collect labels:
+ for(int i = 0; i < dims[out]; i++) {
+ labels[i] = names.get(out + i);
+ }
+ VectorFieldTypeInformation<DoubleVector> type = new VectorFieldTypeInformation<DoubleVector>(DoubleVector.class, dims[out], labels, new DoubleVector(new double[dims[out]]));
+ bundle.appendColumn(type, new ArrayList<DoubleVector>());
+ }
+ else if(etyp[out] == TypeUtil.LABELLIST) {
+ String label = names.get(out);
+ for(int i = 1; i < dims[out]; i++) {
+ label = label + " " + names.get(out + i);
+ }
+ bundle.appendColumn(new SimpleTypeInformation<LabelList>(LabelList.class, label), new ArrayList<LabelList>());
+ }
+ else if(etyp[out] == TypeUtil.EXTERNALID) {
+ bundle.appendColumn(new SimpleTypeInformation<ExternalID>(ExternalID.class, names.get(out)), new ArrayList<ExternalID>());
+ }
+ else if(etyp[out] == TypeUtil.CLASSLABEL) {
+ bundle.appendColumn(new SimpleTypeInformation<ClassLabel>(ClassLabel.class, names.get(out)), new ArrayList<ClassLabel>());
+ }
+ else {
+ throw new AbortException("Unsupported type for column " + in + "->" + out + ": " + ((etyp[out] != null) ? etyp[out].toString() : "null"));
+ }
+ assert (out == bundle.metaLength() - 1);
+ // logger.warning("Added meta: " + bundle.meta(bundle.metaLength() -
+ // 1));
+ in = nin;
+ }
+ // Setup tokenizer
+ StreamTokenizer tokenizer = new StreamTokenizer(br);
+ {
+ tokenizer.whitespaceChars(0, ' ');
+ tokenizer.wordChars(' ' + 1, '\u00FF');
+ tokenizer.whitespaceChars(',', ',');
+ tokenizer.commentChar('%');
+ tokenizer.quoteChar('"');
+ tokenizer.quoteChar('\'');
+ tokenizer.ordinaryChar('{');
+ tokenizer.ordinaryChar('}');
+ tokenizer.eolIsSignificant(true);
+ }
+
+ final int outdim = bundle.metaLength();
+ nextToken(tokenizer);
+ while(tokenizer.ttype != StreamTokenizer.TT_EOF) {
+ // Parse instance
+ if(tokenizer.ttype == StreamTokenizer.TT_EOL) {
+ // ignore empty lines
+ }
+ else if(tokenizer.ttype != '{') {
+ // logger.warning("Regular instance.");
+ Object[] data = new Object[outdim];
+ for(int out = 0; out < outdim; out++) {
+ if(etyp[out] == TypeUtil.NUMBER_VECTOR_FIELD) {
+ double[] cur = new double[dims[out]];
+ for(int k = 0; k < dims[out]; k++) {
+ if(tokenizer.ttype != StreamTokenizer.TT_NUMBER) {
+ throw new AbortException("Expected word token, got: " + tokenizer.toString());
+ }
+ cur[k] = tokenizer.nval;
+ nextToken(tokenizer);
+ }
+ data[out] = new DoubleVector(cur);
+ }
+ else if(etyp[out] == TypeUtil.LABELLIST) {
+ LabelList ll = new LabelList();
+ for(int k = 0; k < dims[out]; k++) {
+ if(tokenizer.ttype != StreamTokenizer.TT_WORD) {
+ throw new AbortException("Expected word token, got: " + tokenizer.toString());
+ }
+ ll.add(tokenizer.sval);
+ nextToken(tokenizer);
+ }
+ data[out] = ll;
+ }
+ else if(etyp[out] == TypeUtil.EXTERNALID) {
+ if(tokenizer.ttype != StreamTokenizer.TT_WORD) {
+ throw new AbortException("Expected word token, got: " + tokenizer.toString());
+ }
+ data[out] = new ExternalID(tokenizer.sval);
+ nextToken(tokenizer);
+ }
+ else if(etyp[out] == TypeUtil.CLASSLABEL) {
+ if(tokenizer.ttype != StreamTokenizer.TT_WORD) {
+ throw new AbortException("Expected word token, got: " + tokenizer.toString());
+ }
+ ClassLabel lbl = new SimpleClassLabel();
+ lbl.init(tokenizer.sval);
+ data[out] = lbl;
+ nextToken(tokenizer);
+ }
+ else {
+ throw new AbortException("Unsupported type for column " + "->" + out + ": " + ((etyp[out] != null) ? etyp[out].toString() : "null"));
+ }
+ }
+ bundle.appendSimple(data);
+ }
+ else {
+ logger.warning("Sparse instance.");
+ while(true) {
+ nextToken(tokenizer);
+ assert (tokenizer.ttype != StreamTokenizer.TT_EOF && tokenizer.ttype != StreamTokenizer.TT_EOL);
+ if(tokenizer.ttype == '}') {
+ nextToken(tokenizer);
+ assert (tokenizer.ttype == StreamTokenizer.TT_EOF || tokenizer.ttype == StreamTokenizer.TT_EOL);
+ break;
+ }
+ else {
+ // sparse token
+ }
+ }
+ throw new AbortException("Sparse ARFF are not (yet) supported.");
+ }
+ if(tokenizer.ttype != StreamTokenizer.TT_EOF) {
+ nextToken(tokenizer);
+ }
+ }
+ return bundle;
+ }
+ catch(IOException e) {
+ throw new AbortException("IO error in parser", e);
+ }
+ }
+
+ private void nextToken(StreamTokenizer tokenizer) throws IOException {
+ tokenizer.nextToken();
+ if((tokenizer.ttype == '\'') || (tokenizer.ttype == '"')) {
+ tokenizer.ttype = StreamTokenizer.TT_WORD;
+ }
+ else if((tokenizer.ttype == StreamTokenizer.TT_WORD) && (tokenizer.sval.equals("?"))) {
+ tokenizer.ttype = '?';
+ }
+ if(tokenizer.ttype == StreamTokenizer.TT_NUMBER) {
+ logger.debug("token: " + tokenizer.nval);
+ }
+ else if(tokenizer.ttype == StreamTokenizer.TT_WORD) {
+ logger.debug("token: " + tokenizer.sval);
+ }
+ else if(tokenizer.ttype == StreamTokenizer.TT_EOF) {
+ logger.debug("token: EOF");
+ }
+ else if(tokenizer.ttype == StreamTokenizer.TT_EOL) {
+ logger.debug("token: EOL");
+ }
+ else {
+ logger.debug("token type: " + tokenizer.ttype);
+ }
+ }
+} \ No newline at end of file
diff --git a/src/de/lmu/ifi/dbs/elki/datasource/parser/BitVectorLabelParser.java b/src/de/lmu/ifi/dbs/elki/datasource/parser/BitVectorLabelParser.java
index 41ae5cab..cd206310 100644
--- a/src/de/lmu/ifi/dbs/elki/datasource/parser/BitVectorLabelParser.java
+++ b/src/de/lmu/ifi/dbs/elki/datasource/parser/BitVectorLabelParser.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.datasource.parser;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.io.BufferedReader;
import java.io.IOException;
diff --git a/src/de/lmu/ifi/dbs/elki/datasource/parser/DistanceParser.java b/src/de/lmu/ifi/dbs/elki/datasource/parser/DistanceParser.java
index f9b403d6..ce8d60e1 100644
--- a/src/de/lmu/ifi/dbs/elki/datasource/parser/DistanceParser.java
+++ b/src/de/lmu/ifi/dbs/elki/datasource/parser/DistanceParser.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.datasource.parser;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.io.InputStream;
diff --git a/src/de/lmu/ifi/dbs/elki/datasource/parser/DistanceParsingResult.java b/src/de/lmu/ifi/dbs/elki/datasource/parser/DistanceParsingResult.java
index 2c1ef55e..48f50e50 100644
--- a/src/de/lmu/ifi/dbs/elki/datasource/parser/DistanceParsingResult.java
+++ b/src/de/lmu/ifi/dbs/elki/datasource/parser/DistanceParsingResult.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.datasource.parser;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.Map;
diff --git a/src/de/lmu/ifi/dbs/elki/datasource/parser/DoubleVectorLabelTransposingParser.java b/src/de/lmu/ifi/dbs/elki/datasource/parser/DoubleVectorLabelTransposingParser.java
index 540dafb4..2019346c 100644
--- a/src/de/lmu/ifi/dbs/elki/datasource/parser/DoubleVectorLabelTransposingParser.java
+++ b/src/de/lmu/ifi/dbs/elki/datasource/parser/DoubleVectorLabelTransposingParser.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.datasource.parser;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.io.BufferedReader;
import java.io.IOException;
diff --git a/src/de/lmu/ifi/dbs/elki/datasource/parser/LinebasedParser.java b/src/de/lmu/ifi/dbs/elki/datasource/parser/LinebasedParser.java
index 5eeab768..5a9ffe14 100644
--- a/src/de/lmu/ifi/dbs/elki/datasource/parser/LinebasedParser.java
+++ b/src/de/lmu/ifi/dbs/elki/datasource/parser/LinebasedParser.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.datasource.parser;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.datasource.bundle.SingleObjectBundle;
import de.lmu.ifi.dbs.elki.utilities.InspectionUtilFrequentlyScanned;
diff --git a/src/de/lmu/ifi/dbs/elki/datasource/parser/NumberDistanceParser.java b/src/de/lmu/ifi/dbs/elki/datasource/parser/NumberDistanceParser.java
index f07d9c68..dcb20020 100644
--- a/src/de/lmu/ifi/dbs/elki/datasource/parser/NumberDistanceParser.java
+++ b/src/de/lmu/ifi/dbs/elki/datasource/parser/NumberDistanceParser.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.datasource.parser;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.io.BufferedReader;
import java.io.IOException;
diff --git a/src/de/lmu/ifi/dbs/elki/datasource/parser/NumberVectorLabelParser.java b/src/de/lmu/ifi/dbs/elki/datasource/parser/NumberVectorLabelParser.java
index b9107cf2..a89f6c3a 100644
--- a/src/de/lmu/ifi/dbs/elki/datasource/parser/NumberVectorLabelParser.java
+++ b/src/de/lmu/ifi/dbs/elki/datasource/parser/NumberVectorLabelParser.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.datasource.parser;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.io.BufferedReader;
import java.io.IOException;
diff --git a/src/de/lmu/ifi/dbs/elki/datasource/parser/ParameterizationFunctionLabelParser.java b/src/de/lmu/ifi/dbs/elki/datasource/parser/ParameterizationFunctionLabelParser.java
index d2973bf4..8c4f44ae 100644
--- a/src/de/lmu/ifi/dbs/elki/datasource/parser/ParameterizationFunctionLabelParser.java
+++ b/src/de/lmu/ifi/dbs/elki/datasource/parser/ParameterizationFunctionLabelParser.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.datasource.parser;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.io.BufferedReader;
import java.io.IOException;
diff --git a/src/de/lmu/ifi/dbs/elki/datasource/parser/Parser.java b/src/de/lmu/ifi/dbs/elki/datasource/parser/Parser.java
index e320f873..b0222b99 100644
--- a/src/de/lmu/ifi/dbs/elki/datasource/parser/Parser.java
+++ b/src/de/lmu/ifi/dbs/elki/datasource/parser/Parser.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.datasource.parser;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.io.InputStream;
diff --git a/src/de/lmu/ifi/dbs/elki/datasource/parser/SimplePolygonParser.java b/src/de/lmu/ifi/dbs/elki/datasource/parser/SimplePolygonParser.java
index 6f2a5508..98f9888d 100644
--- a/src/de/lmu/ifi/dbs/elki/datasource/parser/SimplePolygonParser.java
+++ b/src/de/lmu/ifi/dbs/elki/datasource/parser/SimplePolygonParser.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.datasource.parser;
-/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.io.BufferedReader;
import java.io.IOException;
@@ -32,6 +33,7 @@ import java.util.List;
import java.util.regex.Matcher;
import java.util.regex.Pattern;
+import de.lmu.ifi.dbs.elki.data.ExternalID;
import de.lmu.ifi.dbs.elki.data.LabelList;
import de.lmu.ifi.dbs.elki.data.spatial.Polygon;
import de.lmu.ifi.dbs.elki.data.spatial.PolygonsObject;
@@ -40,7 +42,6 @@ import de.lmu.ifi.dbs.elki.datasource.bundle.MultipleObjectsBundle;
import de.lmu.ifi.dbs.elki.logging.Logging;
import de.lmu.ifi.dbs.elki.math.linearalgebra.Vector;
import de.lmu.ifi.dbs.elki.utilities.optionhandling.parameterization.Parameterization;
-import de.lmu.ifi.dbs.elki.utilities.pairs.Pair;
/**
* Parser to load polygon data (2D and 3D only) from a simple format. One record
@@ -87,12 +88,14 @@ public class SimplePolygonParser extends AbstractParser implements Parser {
List<PolygonsObject> polys = new ArrayList<PolygonsObject>();
List<LabelList> labels = new ArrayList<LabelList>();
+ List<ExternalID> eids = new ArrayList<ExternalID>();
try {
for(String line; (line = reader.readLine()) != null; lineNumber++) {
if(!line.startsWith(COMMENT) && line.length() > 0) {
- Pair<PolygonsObject, LabelList> objectAndLabels = parseLine(line);
- polys.add(objectAndLabels.first);
- labels.add(objectAndLabels.second);
+ Object[] objs = parseLine(line);
+ polys.add((PolygonsObject)objs[0]);
+ labels.add((LabelList)objs[1]);
+ eids.add((ExternalID)objs[2]);
}
}
}
@@ -100,7 +103,7 @@ public class SimplePolygonParser extends AbstractParser implements Parser {
throw new IllegalArgumentException("Error while parsing line " + lineNumber + ".");
}
- return MultipleObjectsBundle.makeSimple(TypeUtil.POLYGON_TYPE, polys, TypeUtil.LABELLIST, labels);
+ return MultipleObjectsBundle.makeSimple(TypeUtil.POLYGON_TYPE, polys, TypeUtil.LABELLIST, labels, TypeUtil.EXTERNALID, eids);
}
/**
@@ -110,7 +113,7 @@ public class SimplePolygonParser extends AbstractParser implements Parser {
*
* @return Parsed polygon
*/
- private Pair<PolygonsObject, LabelList> parseLine(String line) {
+ private Object[] parseLine(String line) {
List<String> entries = tokenize(line);
Iterator<String> iter = entries.iterator();
@@ -153,7 +156,9 @@ public class SimplePolygonParser extends AbstractParser implements Parser {
if(coords.size() > 0) {
polys.add(new Polygon(coords));
}
- return new Pair<PolygonsObject, LabelList>(new PolygonsObject(polys), labels);
+ // Use first label as eternal ID
+ ExternalID eid = labels.size() > 0 ? new ExternalID(labels.remove(0)) : null;
+ return new Object[] { new PolygonsObject(polys), labels, eid };
}
@Override
diff --git a/src/de/lmu/ifi/dbs/elki/datasource/parser/SparseBitVectorLabelParser.java b/src/de/lmu/ifi/dbs/elki/datasource/parser/SparseBitVectorLabelParser.java
index d29e7393..4b349f6a 100644
--- a/src/de/lmu/ifi/dbs/elki/datasource/parser/SparseBitVectorLabelParser.java
+++ b/src/de/lmu/ifi/dbs/elki/datasource/parser/SparseBitVectorLabelParser.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.datasource.parser;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.io.BufferedReader;
import java.io.IOException;
diff --git a/src/de/lmu/ifi/dbs/elki/datasource/parser/SparseFloatVectorLabelParser.java b/src/de/lmu/ifi/dbs/elki/datasource/parser/SparseFloatVectorLabelParser.java
index caa06e84..b4e7ee3e 100644
--- a/src/de/lmu/ifi/dbs/elki/datasource/parser/SparseFloatVectorLabelParser.java
+++ b/src/de/lmu/ifi/dbs/elki/datasource/parser/SparseFloatVectorLabelParser.java
@@ -95,7 +95,6 @@ public class SparseFloatVectorLabelParser extends NumberVectorLabelParser<Sparse
private int dimensionality = -1;
@Override
- @SuppressWarnings("unused")
public SparseFloatVector createDBObject(List<Double> attributes) {
throw new UnsupportedOperationException("This method should never be reached.");
}
diff --git a/src/de/lmu/ifi/dbs/elki/datasource/parser/TermFrequencyParser.java b/src/de/lmu/ifi/dbs/elki/datasource/parser/TermFrequencyParser.java
index 42db180d..8448e4c4 100644
--- a/src/de/lmu/ifi/dbs/elki/datasource/parser/TermFrequencyParser.java
+++ b/src/de/lmu/ifi/dbs/elki/datasource/parser/TermFrequencyParser.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.datasource.parser;
-/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.io.BufferedReader;
import java.io.IOException;
@@ -86,7 +87,6 @@ public class TermFrequencyParser extends NumberVectorLabelParser<SparseFloatVect
}
@Override
- @SuppressWarnings("unused")
protected SparseFloatVector createDBObject(List<Double> attributes) {
throw new UnsupportedOperationException("This method should never be reached.");
}
diff --git a/src/de/lmu/ifi/dbs/elki/distance/DistanceUtil.java b/src/de/lmu/ifi/dbs/elki/distance/DistanceUtil.java
index f9712abe..0b6ccd10 100644
--- a/src/de/lmu/ifi/dbs/elki/distance/DistanceUtil.java
+++ b/src/de/lmu/ifi/dbs/elki/distance/DistanceUtil.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.distance;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.distance.distancevalue.Distance;
diff --git a/src/de/lmu/ifi/dbs/elki/distance/distancefunction/AbstractCosineDistanceFunction.java b/src/de/lmu/ifi/dbs/elki/distance/distancefunction/AbstractCosineDistanceFunction.java
index 194fde3f..61e4a22f 100644
--- a/src/de/lmu/ifi/dbs/elki/distance/distancefunction/AbstractCosineDistanceFunction.java
+++ b/src/de/lmu/ifi/dbs/elki/distance/distancefunction/AbstractCosineDistanceFunction.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.distance.distancefunction;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.BitSet;
diff --git a/src/de/lmu/ifi/dbs/elki/distance/distancefunction/AbstractDBIDDistanceFunction.java b/src/de/lmu/ifi/dbs/elki/distance/distancefunction/AbstractDBIDDistanceFunction.java
index 55e77b9d..71d8d0bb 100644
--- a/src/de/lmu/ifi/dbs/elki/distance/distancefunction/AbstractDBIDDistanceFunction.java
+++ b/src/de/lmu/ifi/dbs/elki/distance/distancefunction/AbstractDBIDDistanceFunction.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.distance.distancefunction;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.data.type.SimpleTypeInformation;
import de.lmu.ifi.dbs.elki.data.type.TypeUtil;
diff --git a/src/de/lmu/ifi/dbs/elki/distance/distancefunction/AbstractDatabaseDistanceFunction.java b/src/de/lmu/ifi/dbs/elki/distance/distancefunction/AbstractDatabaseDistanceFunction.java
index dd7ef373..e1055816 100644
--- a/src/de/lmu/ifi/dbs/elki/distance/distancefunction/AbstractDatabaseDistanceFunction.java
+++ b/src/de/lmu/ifi/dbs/elki/distance/distancefunction/AbstractDatabaseDistanceFunction.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.distance.distancefunction;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.database.query.distance.AbstractDatabaseDistanceQuery;
import de.lmu.ifi.dbs.elki.database.relation.Relation;
diff --git a/src/de/lmu/ifi/dbs/elki/distance/distancefunction/AbstractIndexBasedDistanceFunction.java b/src/de/lmu/ifi/dbs/elki/distance/distancefunction/AbstractIndexBasedDistanceFunction.java
index ac43b8e0..97280ba6 100644
--- a/src/de/lmu/ifi/dbs/elki/distance/distancefunction/AbstractIndexBasedDistanceFunction.java
+++ b/src/de/lmu/ifi/dbs/elki/distance/distancefunction/AbstractIndexBasedDistanceFunction.java
@@ -1,27 +1,29 @@
package de.lmu.ifi.dbs.elki.distance.distancefunction;
-/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
+import de.lmu.ifi.dbs.elki.data.type.TypeInformation;
import de.lmu.ifi.dbs.elki.database.query.distance.AbstractDatabaseDistanceQuery;
import de.lmu.ifi.dbs.elki.database.relation.Relation;
import de.lmu.ifi.dbs.elki.distance.distancevalue.Distance;
@@ -69,10 +71,20 @@ public abstract class AbstractIndexBasedDistanceFunction<O, I extends Index, D e
return true;
}
+ @Override
+ final public TypeInformation getInputTypeRestriction() {
+ return indexFactory.getInputTypeRestriction();
+ }
+
/**
* The actual instance bound to a particular database.
*
* @author Erich Schubert
+ *
+ * @param <O> Object type
+ * @param <I> Index type
+ * @param <D> Distance type
+ * @param <F> Distance function type
*/
abstract public static class Instance<O, I extends Index, D extends Distance<D>, F extends DistanceFunction<? super O, D>> extends AbstractDatabaseDistanceQuery<O, D> implements IndexBasedDistanceFunction.Instance<O, I, D> {
/**
diff --git a/src/de/lmu/ifi/dbs/elki/distance/distancefunction/AbstractPrimitiveDistanceFunction.java b/src/de/lmu/ifi/dbs/elki/distance/distancefunction/AbstractPrimitiveDistanceFunction.java
index 2a13ca1a..d4ec52b1 100644
--- a/src/de/lmu/ifi/dbs/elki/distance/distancefunction/AbstractPrimitiveDistanceFunction.java
+++ b/src/de/lmu/ifi/dbs/elki/distance/distancefunction/AbstractPrimitiveDistanceFunction.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.distance.distancefunction;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.database.query.distance.DistanceQuery;
import de.lmu.ifi.dbs.elki.database.query.distance.PrimitiveDistanceQuery;
diff --git a/src/de/lmu/ifi/dbs/elki/distance/distancefunction/AbstractVectorDoubleDistanceFunction.java b/src/de/lmu/ifi/dbs/elki/distance/distancefunction/AbstractVectorDoubleDistanceFunction.java
index f0b4ebc3..b06d1fbc 100644
--- a/src/de/lmu/ifi/dbs/elki/distance/distancefunction/AbstractVectorDoubleDistanceFunction.java
+++ b/src/de/lmu/ifi/dbs/elki/distance/distancefunction/AbstractVectorDoubleDistanceFunction.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.distance.distancefunction;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.data.NumberVector;
import de.lmu.ifi.dbs.elki.data.type.SimpleTypeInformation;
diff --git a/src/de/lmu/ifi/dbs/elki/distance/distancefunction/ArcCosineDistanceFunction.java b/src/de/lmu/ifi/dbs/elki/distance/distancefunction/ArcCosineDistanceFunction.java
index b01722c6..fd19bfef 100644
--- a/src/de/lmu/ifi/dbs/elki/distance/distancefunction/ArcCosineDistanceFunction.java
+++ b/src/de/lmu/ifi/dbs/elki/distance/distancefunction/ArcCosineDistanceFunction.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.distance.distancefunction;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.data.NumberVector;
import de.lmu.ifi.dbs.elki.utilities.optionhandling.AbstractParameterizer;
diff --git a/src/de/lmu/ifi/dbs/elki/distance/distancefunction/CosineDistanceFunction.java b/src/de/lmu/ifi/dbs/elki/distance/distancefunction/CosineDistanceFunction.java
index bfb1f664..25abe7ef 100644
--- a/src/de/lmu/ifi/dbs/elki/distance/distancefunction/CosineDistanceFunction.java
+++ b/src/de/lmu/ifi/dbs/elki/distance/distancefunction/CosineDistanceFunction.java
@@ -1,27 +1,27 @@
package de.lmu.ifi.dbs.elki.distance.distancefunction;
-/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.data.NumberVector;
import de.lmu.ifi.dbs.elki.utilities.optionhandling.AbstractParameterizer;
diff --git a/src/de/lmu/ifi/dbs/elki/distance/distancefunction/DBIDDistanceFunction.java b/src/de/lmu/ifi/dbs/elki/distance/distancefunction/DBIDDistanceFunction.java
index e75b05b2..25a74c19 100644
--- a/src/de/lmu/ifi/dbs/elki/distance/distancefunction/DBIDDistanceFunction.java
+++ b/src/de/lmu/ifi/dbs/elki/distance/distancefunction/DBIDDistanceFunction.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.distance.distancefunction;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.database.ids.DBID;
import de.lmu.ifi.dbs.elki.distance.distancevalue.Distance;
diff --git a/src/de/lmu/ifi/dbs/elki/distance/distancefunction/DistanceFunction.java b/src/de/lmu/ifi/dbs/elki/distance/distancefunction/DistanceFunction.java
index faa00944..cc8a3699 100644
--- a/src/de/lmu/ifi/dbs/elki/distance/distancefunction/DistanceFunction.java
+++ b/src/de/lmu/ifi/dbs/elki/distance/distancefunction/DistanceFunction.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.distance.distancefunction;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.data.type.TypeInformation;
import de.lmu.ifi.dbs.elki.database.query.distance.DistanceQuery;
diff --git a/src/de/lmu/ifi/dbs/elki/distance/distancefunction/EuclideanDistanceFunction.java b/src/de/lmu/ifi/dbs/elki/distance/distancefunction/EuclideanDistanceFunction.java
index 20075298..235bedb3 100644
--- a/src/de/lmu/ifi/dbs/elki/distance/distancefunction/EuclideanDistanceFunction.java
+++ b/src/de/lmu/ifi/dbs/elki/distance/distancefunction/EuclideanDistanceFunction.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.distance.distancefunction;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.data.NumberVector;
import de.lmu.ifi.dbs.elki.data.spatial.SpatialComparable;
diff --git a/src/de/lmu/ifi/dbs/elki/distance/distancefunction/FilteredLocalPCABasedDistanceFunction.java b/src/de/lmu/ifi/dbs/elki/distance/distancefunction/FilteredLocalPCABasedDistanceFunction.java
index f07f5127..0bd93ede 100644
--- a/src/de/lmu/ifi/dbs/elki/distance/distancefunction/FilteredLocalPCABasedDistanceFunction.java
+++ b/src/de/lmu/ifi/dbs/elki/distance/distancefunction/FilteredLocalPCABasedDistanceFunction.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.distance.distancefunction;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.data.NumberVector;
import de.lmu.ifi.dbs.elki.database.relation.Relation;
diff --git a/src/de/lmu/ifi/dbs/elki/distance/distancefunction/IndexBasedDistanceFunction.java b/src/de/lmu/ifi/dbs/elki/distance/distancefunction/IndexBasedDistanceFunction.java
index e32cd357..aac19541 100644
--- a/src/de/lmu/ifi/dbs/elki/distance/distancefunction/IndexBasedDistanceFunction.java
+++ b/src/de/lmu/ifi/dbs/elki/distance/distancefunction/IndexBasedDistanceFunction.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.distance.distancefunction;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.database.query.distance.DistanceQuery;
import de.lmu.ifi.dbs.elki.distance.distancevalue.Distance;
diff --git a/src/de/lmu/ifi/dbs/elki/distance/distancefunction/LPNormDistanceFunction.java b/src/de/lmu/ifi/dbs/elki/distance/distancefunction/LPNormDistanceFunction.java
index f6111327..d17825e9 100644
--- a/src/de/lmu/ifi/dbs/elki/distance/distancefunction/LPNormDistanceFunction.java
+++ b/src/de/lmu/ifi/dbs/elki/distance/distancefunction/LPNormDistanceFunction.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.distance.distancefunction;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.data.NumberVector;
import de.lmu.ifi.dbs.elki.utilities.optionhandling.AbstractParameterizer;
diff --git a/src/de/lmu/ifi/dbs/elki/distance/distancefunction/LocallyWeightedDistanceFunction.java b/src/de/lmu/ifi/dbs/elki/distance/distancefunction/LocallyWeightedDistanceFunction.java
index 4ce23e15..1345013b 100644
--- a/src/de/lmu/ifi/dbs/elki/distance/distancefunction/LocallyWeightedDistanceFunction.java
+++ b/src/de/lmu/ifi/dbs/elki/distance/distancefunction/LocallyWeightedDistanceFunction.java
@@ -1,31 +1,30 @@
package de.lmu.ifi.dbs.elki.distance.distancefunction;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.data.NumberVector;
import de.lmu.ifi.dbs.elki.data.spatial.SpatialComparable;
-import de.lmu.ifi.dbs.elki.data.type.TypeUtil;
-import de.lmu.ifi.dbs.elki.data.type.VectorFieldTypeInformation;
import de.lmu.ifi.dbs.elki.database.ids.DBID;
import de.lmu.ifi.dbs.elki.database.relation.Relation;
import de.lmu.ifi.dbs.elki.distance.distancevalue.DoubleDistance;
@@ -74,11 +73,6 @@ public class LocallyWeightedDistanceFunction<V extends NumberVector<?, ?>> exten
}
@Override
- public VectorFieldTypeInformation<? super V> getInputTypeRestriction() {
- return TypeUtil.NUMBER_VECTOR_FIELD;
- }
-
- @Override
public <T extends V> Instance<T> instantiate(Relation<T> database) {
// We can't really avoid these warnings, due to a limitation in Java
// Generics (AFAICT)
diff --git a/src/de/lmu/ifi/dbs/elki/distance/distancefunction/ManhattanDistanceFunction.java b/src/de/lmu/ifi/dbs/elki/distance/distancefunction/ManhattanDistanceFunction.java
index bbbf3ebd..8cbe0fdb 100644
--- a/src/de/lmu/ifi/dbs/elki/distance/distancefunction/ManhattanDistanceFunction.java
+++ b/src/de/lmu/ifi/dbs/elki/distance/distancefunction/ManhattanDistanceFunction.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.distance.distancefunction;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.data.NumberVector;
import de.lmu.ifi.dbs.elki.data.spatial.SpatialComparable;
diff --git a/src/de/lmu/ifi/dbs/elki/distance/distancefunction/MaximumDistanceFunction.java b/src/de/lmu/ifi/dbs/elki/distance/distancefunction/MaximumDistanceFunction.java
index 1c4410a7..ece11645 100644
--- a/src/de/lmu/ifi/dbs/elki/distance/distancefunction/MaximumDistanceFunction.java
+++ b/src/de/lmu/ifi/dbs/elki/distance/distancefunction/MaximumDistanceFunction.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.distance.distancefunction;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.data.NumberVector;
import de.lmu.ifi.dbs.elki.data.spatial.SpatialComparable;
diff --git a/src/de/lmu/ifi/dbs/elki/distance/distancefunction/MinKDistance.java b/src/de/lmu/ifi/dbs/elki/distance/distancefunction/MinKDistance.java
index a12a1581..76717626 100644
--- a/src/de/lmu/ifi/dbs/elki/distance/distancefunction/MinKDistance.java
+++ b/src/de/lmu/ifi/dbs/elki/distance/distancefunction/MinKDistance.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.distance.distancefunction;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.List;
diff --git a/src/de/lmu/ifi/dbs/elki/distance/distancefunction/MinimumDistanceFunction.java b/src/de/lmu/ifi/dbs/elki/distance/distancefunction/MinimumDistanceFunction.java
index a0f7b580..c9c00cc4 100644
--- a/src/de/lmu/ifi/dbs/elki/distance/distancefunction/MinimumDistanceFunction.java
+++ b/src/de/lmu/ifi/dbs/elki/distance/distancefunction/MinimumDistanceFunction.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.distance.distancefunction;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.data.NumberVector;
import de.lmu.ifi.dbs.elki.data.spatial.SpatialComparable;
diff --git a/src/de/lmu/ifi/dbs/elki/distance/distancefunction/PrimitiveDistanceFunction.java b/src/de/lmu/ifi/dbs/elki/distance/distancefunction/PrimitiveDistanceFunction.java
index de4adb43..d27d9a38 100644
--- a/src/de/lmu/ifi/dbs/elki/distance/distancefunction/PrimitiveDistanceFunction.java
+++ b/src/de/lmu/ifi/dbs/elki/distance/distancefunction/PrimitiveDistanceFunction.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.distance.distancefunction;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.data.type.SimpleTypeInformation;
import de.lmu.ifi.dbs.elki.distance.distancevalue.Distance;
diff --git a/src/de/lmu/ifi/dbs/elki/distance/distancefunction/PrimitiveDoubleDistanceFunction.java b/src/de/lmu/ifi/dbs/elki/distance/distancefunction/PrimitiveDoubleDistanceFunction.java
index af2d7f76..03306ef0 100644
--- a/src/de/lmu/ifi/dbs/elki/distance/distancefunction/PrimitiveDoubleDistanceFunction.java
+++ b/src/de/lmu/ifi/dbs/elki/distance/distancefunction/PrimitiveDoubleDistanceFunction.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.distance.distancefunction;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.distance.distancevalue.DoubleDistance;
diff --git a/src/de/lmu/ifi/dbs/elki/distance/distancefunction/ProxyDistanceFunction.java b/src/de/lmu/ifi/dbs/elki/distance/distancefunction/ProxyDistanceFunction.java
index d2e72596..909b1120 100644
--- a/src/de/lmu/ifi/dbs/elki/distance/distancefunction/ProxyDistanceFunction.java
+++ b/src/de/lmu/ifi/dbs/elki/distance/distancefunction/ProxyDistanceFunction.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.distance.distancefunction;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.database.ids.DBID;
import de.lmu.ifi.dbs.elki.database.query.distance.DistanceQuery;
@@ -117,4 +118,9 @@ public class ProxyDistanceFunction<O, D extends Distance<D>> extends AbstractDBI
ProxyDistanceFunction<?, ?> other = (ProxyDistanceFunction<?, ?>) obj;
return this.inner.equals(other.inner);
}
+
+ @Override
+ public int hashCode() {
+ return this.inner.hashCode();
+ }
} \ No newline at end of file
diff --git a/src/de/lmu/ifi/dbs/elki/distance/distancefunction/RandomStableDistanceFunction.java b/src/de/lmu/ifi/dbs/elki/distance/distancefunction/RandomStableDistanceFunction.java
index dc68fe97..3d5715ec 100644
--- a/src/de/lmu/ifi/dbs/elki/distance/distancefunction/RandomStableDistanceFunction.java
+++ b/src/de/lmu/ifi/dbs/elki/distance/distancefunction/RandomStableDistanceFunction.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.distance.distancefunction;
-/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.Random;
@@ -123,6 +124,11 @@ public class RandomStableDistanceFunction extends AbstractDBIDDistanceFunction<D
return this.seed == ((RandomStableDistanceFunction) obj).seed;
}
+ @Override
+ public int hashCode() {
+ return (int) seed;
+ }
+
/**
* Parameterization class.
*
diff --git a/src/de/lmu/ifi/dbs/elki/distance/distancefunction/SharedNearestNeighborJaccardDistanceFunction.java b/src/de/lmu/ifi/dbs/elki/distance/distancefunction/SharedNearestNeighborJaccardDistanceFunction.java
new file mode 100644
index 00000000..99f6ec56
--- /dev/null
+++ b/src/de/lmu/ifi/dbs/elki/distance/distancefunction/SharedNearestNeighborJaccardDistanceFunction.java
@@ -0,0 +1,156 @@
+package de.lmu.ifi.dbs.elki.distance.distancefunction;
+
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
+
+import java.util.Iterator;
+
+import de.lmu.ifi.dbs.elki.database.ids.DBID;
+import de.lmu.ifi.dbs.elki.database.ids.TreeSetDBIDs;
+import de.lmu.ifi.dbs.elki.database.relation.Relation;
+import de.lmu.ifi.dbs.elki.distance.distancevalue.DoubleDistance;
+import de.lmu.ifi.dbs.elki.index.preprocessed.snn.SharedNearestNeighborIndex;
+import de.lmu.ifi.dbs.elki.index.preprocessed.snn.SharedNearestNeighborPreprocessor;
+import de.lmu.ifi.dbs.elki.utilities.optionhandling.parameterization.Parameterization;
+
+/**
+ * SharedNearestNeighborJaccardDistanceFunction computes the Jaccard
+ * coefficient, which is a proper distance metric.
+ *
+ * @author Erich Schubert
+ *
+ * @apiviz.has de.lmu.ifi.dbs.elki.index.preprocessed.snn.SharedNearestNeighborIndex.Factory
+ * @apiviz.uses Instance oneway - - «create»
+ *
+ * @param <O> object type
+ */
+public class SharedNearestNeighborJaccardDistanceFunction<O> extends AbstractIndexBasedDistanceFunction<O, SharedNearestNeighborIndex<O>, DoubleDistance> {
+ /**
+ * Constructor.
+ *
+ * @param indexFactory Index factory.
+ */
+ public SharedNearestNeighborJaccardDistanceFunction(SharedNearestNeighborIndex.Factory<O, SharedNearestNeighborIndex<O>> indexFactory) {
+ super(indexFactory);
+ }
+
+ @SuppressWarnings("unchecked")
+ @Override
+ public <T extends O> Instance<T> instantiate(Relation<T> database) {
+ SharedNearestNeighborIndex<O> indexi = indexFactory.instantiate((Relation<O>) database);
+ return (Instance<T>) new Instance<O>((Relation<O>) database, indexi, this);
+ }
+
+ /**
+ * Actual instance for a dataset.
+ *
+ * @author Erich Schubert
+ *
+ * @apiviz.uses SharedNearestNeighborIndex
+ *
+ * @param <T> Object type
+ */
+ public static class Instance<T> extends AbstractIndexBasedDistanceFunction.Instance<T, SharedNearestNeighborIndex<T>, DoubleDistance, SharedNearestNeighborJaccardDistanceFunction<T>> {
+ /**
+ * Constructor.
+ *
+ * @param database Database
+ * @param preprocessor Preprocessor
+ * @param parent Parent distance
+ */
+ public Instance(Relation<T> database, SharedNearestNeighborIndex<T> preprocessor, SharedNearestNeighborJaccardDistanceFunction<T> parent) {
+ super(database, preprocessor, parent);
+ }
+
+ static protected double jaccardCoefficient(TreeSetDBIDs neighbors1, TreeSetDBIDs neighbors2) {
+ int intersection = 0;
+ int union = 0;
+ Iterator<DBID> iter1 = neighbors1.iterator();
+ Iterator<DBID> iter2 = neighbors2.iterator();
+ DBID neighbors1ID = iter1.hasNext() ? iter1.next() : null;
+ DBID neighbors2ID = iter2.hasNext() ? iter2.next() : null;
+ while(neighbors1ID != null && neighbors2ID != null) {
+ union++;
+ if(neighbors1ID.equals(neighbors2ID)) {
+ intersection++;
+ neighbors1ID = iter1.hasNext() ? iter1.next() : null;
+ neighbors2ID = iter2.hasNext() ? iter2.next() : null;
+ }
+ else if(neighbors2ID.compareTo(neighbors1ID) > 0) {
+ neighbors1ID = iter1.hasNext() ? iter1.next() : null;
+ }
+ else // neighbors1ID > neighbors2ID
+ {
+ neighbors2ID = iter2.hasNext() ? iter2.next() : null;
+ }
+ }
+ // Count remaining objects
+ while(neighbors1ID != null) {
+ union++;
+ neighbors1ID = iter1.hasNext() ? iter1.next() : null;
+ }
+ while(neighbors2ID != null) {
+ union++;
+ neighbors2ID = iter2.hasNext() ? iter2.next() : null;
+ }
+ return ((double) intersection) / union;
+ }
+
+ @Override
+ public DoubleDistance distance(DBID id1, DBID id2) {
+ TreeSetDBIDs neighbors1 = index.getNearestNeighborSet(id1);
+ TreeSetDBIDs neighbors2 = index.getNearestNeighborSet(id2);
+ return new DoubleDistance(1.0 - jaccardCoefficient(neighbors1, neighbors2));
+ }
+
+ @Override
+ public DoubleDistance getDistanceFactory() {
+ return DoubleDistance.FACTORY;
+ }
+ }
+
+ @Override
+ public DoubleDistance getDistanceFactory() {
+ return DoubleDistance.FACTORY;
+ }
+
+ /**
+ * Parameterization class.
+ *
+ * @author Erich Schubert
+ *
+ * @apiviz.exclude
+ */
+ public static class Parameterizer<O> extends AbstractIndexBasedDistanceFunction.Parameterizer<SharedNearestNeighborIndex.Factory<O, SharedNearestNeighborIndex<O>>> {
+ @Override
+ protected void makeOptions(Parameterization config) {
+ super.makeOptions(config);
+ configIndexFactory(config, SharedNearestNeighborIndex.Factory.class, SharedNearestNeighborPreprocessor.Factory.class);
+ }
+
+ @Override
+ protected SharedNearestNeighborJaccardDistanceFunction<O> makeInstance() {
+ return new SharedNearestNeighborJaccardDistanceFunction<O>(factory);
+ }
+ }
+} \ No newline at end of file
diff --git a/src/de/lmu/ifi/dbs/elki/distance/distancefunction/SpatialPrimitiveDistanceFunction.java b/src/de/lmu/ifi/dbs/elki/distance/distancefunction/SpatialPrimitiveDistanceFunction.java
index c49ab44c..2dd6bd06 100644
--- a/src/de/lmu/ifi/dbs/elki/distance/distancefunction/SpatialPrimitiveDistanceFunction.java
+++ b/src/de/lmu/ifi/dbs/elki/distance/distancefunction/SpatialPrimitiveDistanceFunction.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.distance.distancefunction;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.data.spatial.SpatialComparable;
import de.lmu.ifi.dbs.elki.database.query.distance.SpatialDistanceQuery;
diff --git a/src/de/lmu/ifi/dbs/elki/distance/distancefunction/SpatialPrimitiveDoubleDistanceFunction.java b/src/de/lmu/ifi/dbs/elki/distance/distancefunction/SpatialPrimitiveDoubleDistanceFunction.java
index d5bb7b6d..07527baa 100644
--- a/src/de/lmu/ifi/dbs/elki/distance/distancefunction/SpatialPrimitiveDoubleDistanceFunction.java
+++ b/src/de/lmu/ifi/dbs/elki/distance/distancefunction/SpatialPrimitiveDoubleDistanceFunction.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.distance.distancefunction;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.data.spatial.SpatialComparable;
import de.lmu.ifi.dbs.elki.distance.distancevalue.DoubleDistance;
diff --git a/src/de/lmu/ifi/dbs/elki/distance/distancefunction/SquaredEuclideanDistanceFunction.java b/src/de/lmu/ifi/dbs/elki/distance/distancefunction/SquaredEuclideanDistanceFunction.java
index 09def5b0..e899b1e2 100644
--- a/src/de/lmu/ifi/dbs/elki/distance/distancefunction/SquaredEuclideanDistanceFunction.java
+++ b/src/de/lmu/ifi/dbs/elki/distance/distancefunction/SquaredEuclideanDistanceFunction.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.distance.distancefunction;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.data.NumberVector;
import de.lmu.ifi.dbs.elki.data.spatial.SpatialComparable;
diff --git a/src/de/lmu/ifi/dbs/elki/distance/distancefunction/WeightedDistanceFunction.java b/src/de/lmu/ifi/dbs/elki/distance/distancefunction/WeightedDistanceFunction.java
index b1659520..201a999d 100644
--- a/src/de/lmu/ifi/dbs/elki/distance/distancefunction/WeightedDistanceFunction.java
+++ b/src/de/lmu/ifi/dbs/elki/distance/distancefunction/WeightedDistanceFunction.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.distance.distancefunction;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.data.NumberVector;
import de.lmu.ifi.dbs.elki.data.type.VectorFieldTypeInformation;
diff --git a/src/de/lmu/ifi/dbs/elki/distance/distancefunction/WeightedLPNormDistanceFunction.java b/src/de/lmu/ifi/dbs/elki/distance/distancefunction/WeightedLPNormDistanceFunction.java
index e418a683..a31ed6e7 100644
--- a/src/de/lmu/ifi/dbs/elki/distance/distancefunction/WeightedLPNormDistanceFunction.java
+++ b/src/de/lmu/ifi/dbs/elki/distance/distancefunction/WeightedLPNormDistanceFunction.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.distance.distancefunction;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.Arrays;
diff --git a/src/de/lmu/ifi/dbs/elki/distance/distancefunction/WeightedSquaredEuclideanDistanceFunction.java b/src/de/lmu/ifi/dbs/elki/distance/distancefunction/WeightedSquaredEuclideanDistanceFunction.java
index 9f22ea15..d1bcbf26 100644
--- a/src/de/lmu/ifi/dbs/elki/distance/distancefunction/WeightedSquaredEuclideanDistanceFunction.java
+++ b/src/de/lmu/ifi/dbs/elki/distance/distancefunction/WeightedSquaredEuclideanDistanceFunction.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.distance.distancefunction;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.Arrays;
diff --git a/src/de/lmu/ifi/dbs/elki/distance/distancefunction/adapter/AbstractSimilarityAdapter.java b/src/de/lmu/ifi/dbs/elki/distance/distancefunction/adapter/AbstractSimilarityAdapter.java
index d0a60c53..7f610d8b 100644
--- a/src/de/lmu/ifi/dbs/elki/distance/distancefunction/adapter/AbstractSimilarityAdapter.java
+++ b/src/de/lmu/ifi/dbs/elki/distance/distancefunction/adapter/AbstractSimilarityAdapter.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.distance.distancefunction.adapter;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.data.type.TypeInformation;
import de.lmu.ifi.dbs.elki.database.ids.DBID;
diff --git a/src/de/lmu/ifi/dbs/elki/distance/distancefunction/adapter/SimilarityAdapterArccos.java b/src/de/lmu/ifi/dbs/elki/distance/distancefunction/adapter/SimilarityAdapterArccos.java
index 2797db7d..4f1814ec 100644
--- a/src/de/lmu/ifi/dbs/elki/distance/distancefunction/adapter/SimilarityAdapterArccos.java
+++ b/src/de/lmu/ifi/dbs/elki/distance/distancefunction/adapter/SimilarityAdapterArccos.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.distance.distancefunction.adapter;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.database.query.distance.DistanceQuery;
import de.lmu.ifi.dbs.elki.database.query.similarity.SimilarityQuery;
diff --git a/src/de/lmu/ifi/dbs/elki/distance/distancefunction/adapter/SimilarityAdapterLinear.java b/src/de/lmu/ifi/dbs/elki/distance/distancefunction/adapter/SimilarityAdapterLinear.java
index f41a0a6c..664b6421 100644
--- a/src/de/lmu/ifi/dbs/elki/distance/distancefunction/adapter/SimilarityAdapterLinear.java
+++ b/src/de/lmu/ifi/dbs/elki/distance/distancefunction/adapter/SimilarityAdapterLinear.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.distance.distancefunction.adapter;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.database.query.distance.DistanceQuery;
import de.lmu.ifi.dbs.elki.database.query.similarity.SimilarityQuery;
diff --git a/src/de/lmu/ifi/dbs/elki/distance/distancefunction/adapter/SimilarityAdapterLn.java b/src/de/lmu/ifi/dbs/elki/distance/distancefunction/adapter/SimilarityAdapterLn.java
index 7ab2bce4..8d7ec170 100644
--- a/src/de/lmu/ifi/dbs/elki/distance/distancefunction/adapter/SimilarityAdapterLn.java
+++ b/src/de/lmu/ifi/dbs/elki/distance/distancefunction/adapter/SimilarityAdapterLn.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.distance.distancefunction.adapter;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.database.query.distance.DistanceQuery;
import de.lmu.ifi.dbs.elki.database.query.similarity.SimilarityQuery;
diff --git a/src/de/lmu/ifi/dbs/elki/distance/distancefunction/colorhistogram/HSBHistogramQuadraticDistanceFunction.java b/src/de/lmu/ifi/dbs/elki/distance/distancefunction/colorhistogram/HSBHistogramQuadraticDistanceFunction.java
index fd7d9364..05c766ca 100644
--- a/src/de/lmu/ifi/dbs/elki/distance/distancefunction/colorhistogram/HSBHistogramQuadraticDistanceFunction.java
+++ b/src/de/lmu/ifi/dbs/elki/distance/distancefunction/colorhistogram/HSBHistogramQuadraticDistanceFunction.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.distance.distancefunction.colorhistogram;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.ArrayList;
import java.util.List;
diff --git a/src/de/lmu/ifi/dbs/elki/distance/distancefunction/colorhistogram/HistogramIntersectionDistanceFunction.java b/src/de/lmu/ifi/dbs/elki/distance/distancefunction/colorhistogram/HistogramIntersectionDistanceFunction.java
index 2cfac2b1..362f3589 100644
--- a/src/de/lmu/ifi/dbs/elki/distance/distancefunction/colorhistogram/HistogramIntersectionDistanceFunction.java
+++ b/src/de/lmu/ifi/dbs/elki/distance/distancefunction/colorhistogram/HistogramIntersectionDistanceFunction.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.distance.distancefunction.colorhistogram;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.data.NumberVector;
import de.lmu.ifi.dbs.elki.data.spatial.SpatialComparable;
diff --git a/src/de/lmu/ifi/dbs/elki/distance/distancefunction/colorhistogram/RGBHistogramQuadraticDistanceFunction.java b/src/de/lmu/ifi/dbs/elki/distance/distancefunction/colorhistogram/RGBHistogramQuadraticDistanceFunction.java
index 1c0307d1..b902d43e 100644
--- a/src/de/lmu/ifi/dbs/elki/distance/distancefunction/colorhistogram/RGBHistogramQuadraticDistanceFunction.java
+++ b/src/de/lmu/ifi/dbs/elki/distance/distancefunction/colorhistogram/RGBHistogramQuadraticDistanceFunction.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.distance.distancefunction.colorhistogram;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.distance.distancefunction.WeightedDistanceFunction;
import de.lmu.ifi.dbs.elki.math.linearalgebra.Matrix;
diff --git a/src/de/lmu/ifi/dbs/elki/distance/distancefunction/correlation/ERiCDistanceFunction.java b/src/de/lmu/ifi/dbs/elki/distance/distancefunction/correlation/ERiCDistanceFunction.java
index 9077f34b..08c4ce3b 100644
--- a/src/de/lmu/ifi/dbs/elki/distance/distancefunction/correlation/ERiCDistanceFunction.java
+++ b/src/de/lmu/ifi/dbs/elki/distance/distancefunction/correlation/ERiCDistanceFunction.java
@@ -1,30 +1,29 @@
package de.lmu.ifi.dbs.elki.distance.distancefunction.correlation;
-/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.data.NumberVector;
-import de.lmu.ifi.dbs.elki.data.type.TypeUtil;
-import de.lmu.ifi.dbs.elki.data.type.VectorFieldTypeInformation;
import de.lmu.ifi.dbs.elki.database.ids.DBID;
import de.lmu.ifi.dbs.elki.database.relation.Relation;
import de.lmu.ifi.dbs.elki.distance.distancefunction.AbstractIndexBasedDistanceFunction;
@@ -114,11 +113,6 @@ public class ERiCDistanceFunction extends AbstractIndexBasedDistanceFunction<Num
}
@Override
- public VectorFieldTypeInformation<? super NumberVector<?, ?>> getInputTypeRestriction() {
- return TypeUtil.NUMBER_VECTOR_FIELD;
- }
-
- @Override
public <T extends NumberVector<?, ?>> Instance<T> instantiate(Relation<T> database) {
// We can't really avoid these warnings, due to a limitation in Java
// Generics (AFAICT)
diff --git a/src/de/lmu/ifi/dbs/elki/distance/distancefunction/correlation/PCABasedCorrelationDistanceFunction.java b/src/de/lmu/ifi/dbs/elki/distance/distancefunction/correlation/PCABasedCorrelationDistanceFunction.java
index 7583d448..fdfac072 100644
--- a/src/de/lmu/ifi/dbs/elki/distance/distancefunction/correlation/PCABasedCorrelationDistanceFunction.java
+++ b/src/de/lmu/ifi/dbs/elki/distance/distancefunction/correlation/PCABasedCorrelationDistanceFunction.java
@@ -1,30 +1,29 @@
package de.lmu.ifi.dbs.elki.distance.distancefunction.correlation;
-/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.data.NumberVector;
-import de.lmu.ifi.dbs.elki.data.type.TypeUtil;
-import de.lmu.ifi.dbs.elki.data.type.VectorFieldTypeInformation;
import de.lmu.ifi.dbs.elki.database.ids.DBID;
import de.lmu.ifi.dbs.elki.database.relation.Relation;
import de.lmu.ifi.dbs.elki.distance.distancefunction.AbstractIndexBasedDistanceFunction;
@@ -89,11 +88,6 @@ public class PCABasedCorrelationDistanceFunction extends AbstractIndexBasedDista
}
@Override
- public VectorFieldTypeInformation<? super NumberVector<?, ?>> getInputTypeRestriction() {
- return TypeUtil.NUMBER_VECTOR_FIELD;
- }
-
- @Override
public <T extends NumberVector<?, ?>> Instance<T> instantiate(Relation<T> database) {
// We can't really avoid these warnings, due to a limitation in Java
// Generics (AFAICT)
diff --git a/src/de/lmu/ifi/dbs/elki/distance/distancefunction/correlation/PearsonCorrelationDistanceFunction.java b/src/de/lmu/ifi/dbs/elki/distance/distancefunction/correlation/PearsonCorrelationDistanceFunction.java
index b9493956..96e5262e 100644
--- a/src/de/lmu/ifi/dbs/elki/distance/distancefunction/correlation/PearsonCorrelationDistanceFunction.java
+++ b/src/de/lmu/ifi/dbs/elki/distance/distancefunction/correlation/PearsonCorrelationDistanceFunction.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.distance.distancefunction.correlation;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.data.NumberVector;
import de.lmu.ifi.dbs.elki.distance.distancefunction.AbstractVectorDoubleDistanceFunction;
diff --git a/src/de/lmu/ifi/dbs/elki/distance/distancefunction/correlation/SquaredPearsonCorrelationDistanceFunction.java b/src/de/lmu/ifi/dbs/elki/distance/distancefunction/correlation/SquaredPearsonCorrelationDistanceFunction.java
index c6c34adc..786fcd82 100644
--- a/src/de/lmu/ifi/dbs/elki/distance/distancefunction/correlation/SquaredPearsonCorrelationDistanceFunction.java
+++ b/src/de/lmu/ifi/dbs/elki/distance/distancefunction/correlation/SquaredPearsonCorrelationDistanceFunction.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.distance.distancefunction.correlation;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.data.NumberVector;
import de.lmu.ifi.dbs.elki.distance.distancefunction.AbstractVectorDoubleDistanceFunction;
diff --git a/src/de/lmu/ifi/dbs/elki/distance/distancefunction/correlation/WeightedPearsonCorrelationDistanceFunction.java b/src/de/lmu/ifi/dbs/elki/distance/distancefunction/correlation/WeightedPearsonCorrelationDistanceFunction.java
index d1bf98c4..adabd90f 100644
--- a/src/de/lmu/ifi/dbs/elki/distance/distancefunction/correlation/WeightedPearsonCorrelationDistanceFunction.java
+++ b/src/de/lmu/ifi/dbs/elki/distance/distancefunction/correlation/WeightedPearsonCorrelationDistanceFunction.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.distance.distancefunction.correlation;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.Arrays;
diff --git a/src/de/lmu/ifi/dbs/elki/distance/distancefunction/correlation/WeightedSquaredPearsonCorrelationDistanceFunction.java b/src/de/lmu/ifi/dbs/elki/distance/distancefunction/correlation/WeightedSquaredPearsonCorrelationDistanceFunction.java
index 875dac8a..e7abca9b 100644
--- a/src/de/lmu/ifi/dbs/elki/distance/distancefunction/correlation/WeightedSquaredPearsonCorrelationDistanceFunction.java
+++ b/src/de/lmu/ifi/dbs/elki/distance/distancefunction/correlation/WeightedSquaredPearsonCorrelationDistanceFunction.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.distance.distancefunction.correlation;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.Arrays;
diff --git a/src/de/lmu/ifi/dbs/elki/distance/distancefunction/external/DiskCacheBasedDoubleDistanceFunction.java b/src/de/lmu/ifi/dbs/elki/distance/distancefunction/external/DiskCacheBasedDoubleDistanceFunction.java
index cb2e07c7..e541452e 100644
--- a/src/de/lmu/ifi/dbs/elki/distance/distancefunction/external/DiskCacheBasedDoubleDistanceFunction.java
+++ b/src/de/lmu/ifi/dbs/elki/distance/distancefunction/external/DiskCacheBasedDoubleDistanceFunction.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.distance.distancefunction.external;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.io.File;
import java.io.IOException;
diff --git a/src/de/lmu/ifi/dbs/elki/distance/distancefunction/external/DiskCacheBasedFloatDistanceFunction.java b/src/de/lmu/ifi/dbs/elki/distance/distancefunction/external/DiskCacheBasedFloatDistanceFunction.java
index a79e5ea4..b9ebbf9e 100644
--- a/src/de/lmu/ifi/dbs/elki/distance/distancefunction/external/DiskCacheBasedFloatDistanceFunction.java
+++ b/src/de/lmu/ifi/dbs/elki/distance/distancefunction/external/DiskCacheBasedFloatDistanceFunction.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.distance.distancefunction.external;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.io.File;
import java.io.IOException;
diff --git a/src/de/lmu/ifi/dbs/elki/distance/distancefunction/external/FileBasedDoubleDistanceFunction.java b/src/de/lmu/ifi/dbs/elki/distance/distancefunction/external/FileBasedDoubleDistanceFunction.java
index 08ef64a6..46ee475d 100644
--- a/src/de/lmu/ifi/dbs/elki/distance/distancefunction/external/FileBasedDoubleDistanceFunction.java
+++ b/src/de/lmu/ifi/dbs/elki/distance/distancefunction/external/FileBasedDoubleDistanceFunction.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.distance.distancefunction.external;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.io.File;
import java.io.FileInputStream;
diff --git a/src/de/lmu/ifi/dbs/elki/distance/distancefunction/external/FileBasedFloatDistanceFunction.java b/src/de/lmu/ifi/dbs/elki/distance/distancefunction/external/FileBasedFloatDistanceFunction.java
index 64e6cdc8..d01983af 100644
--- a/src/de/lmu/ifi/dbs/elki/distance/distancefunction/external/FileBasedFloatDistanceFunction.java
+++ b/src/de/lmu/ifi/dbs/elki/distance/distancefunction/external/FileBasedFloatDistanceFunction.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.distance.distancefunction.external;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.io.File;
import java.io.FileInputStream;
diff --git a/src/de/lmu/ifi/dbs/elki/distance/distancefunction/geo/DimensionSelectingLatLngDistanceFunction.java b/src/de/lmu/ifi/dbs/elki/distance/distancefunction/geo/DimensionSelectingLatLngDistanceFunction.java
index 22a71e0c..f1c8b1b3 100644
--- a/src/de/lmu/ifi/dbs/elki/distance/distancefunction/geo/DimensionSelectingLatLngDistanceFunction.java
+++ b/src/de/lmu/ifi/dbs/elki/distance/distancefunction/geo/DimensionSelectingLatLngDistanceFunction.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.distance.distancefunction.geo;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.data.NumberVector;
import de.lmu.ifi.dbs.elki.data.type.SimpleTypeInformation;
diff --git a/src/de/lmu/ifi/dbs/elki/distance/distancefunction/geo/LatLngDistanceFunction.java b/src/de/lmu/ifi/dbs/elki/distance/distancefunction/geo/LatLngDistanceFunction.java
index 0e0b27a0..2b3d3805 100644
--- a/src/de/lmu/ifi/dbs/elki/distance/distancefunction/geo/LatLngDistanceFunction.java
+++ b/src/de/lmu/ifi/dbs/elki/distance/distancefunction/geo/LatLngDistanceFunction.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.distance.distancefunction.geo;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.data.NumberVector;
import de.lmu.ifi.dbs.elki.data.type.SimpleTypeInformation;
diff --git a/src/de/lmu/ifi/dbs/elki/distance/distancefunction/geo/LngLatDistanceFunction.java b/src/de/lmu/ifi/dbs/elki/distance/distancefunction/geo/LngLatDistanceFunction.java
index d0978631..053e2f18 100644
--- a/src/de/lmu/ifi/dbs/elki/distance/distancefunction/geo/LngLatDistanceFunction.java
+++ b/src/de/lmu/ifi/dbs/elki/distance/distancefunction/geo/LngLatDistanceFunction.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.distance.distancefunction.geo;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.data.NumberVector;
import de.lmu.ifi.dbs.elki.data.type.SimpleTypeInformation;
diff --git a/src/de/lmu/ifi/dbs/elki/distance/distancefunction/subspace/AbstractDimensionsSelectingDoubleDistanceFunction.java b/src/de/lmu/ifi/dbs/elki/distance/distancefunction/subspace/AbstractDimensionsSelectingDoubleDistanceFunction.java
index f5cb4080..a7204562 100644
--- a/src/de/lmu/ifi/dbs/elki/distance/distancefunction/subspace/AbstractDimensionsSelectingDoubleDistanceFunction.java
+++ b/src/de/lmu/ifi/dbs/elki/distance/distancefunction/subspace/AbstractDimensionsSelectingDoubleDistanceFunction.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.distance.distancefunction.subspace;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.BitSet;
diff --git a/src/de/lmu/ifi/dbs/elki/distance/distancefunction/subspace/AbstractPreferenceVectorBasedCorrelationDistanceFunction.java b/src/de/lmu/ifi/dbs/elki/distance/distancefunction/subspace/AbstractPreferenceVectorBasedCorrelationDistanceFunction.java
index 17c8f5f3..3d6aab90 100644
--- a/src/de/lmu/ifi/dbs/elki/distance/distancefunction/subspace/AbstractPreferenceVectorBasedCorrelationDistanceFunction.java
+++ b/src/de/lmu/ifi/dbs/elki/distance/distancefunction/subspace/AbstractPreferenceVectorBasedCorrelationDistanceFunction.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.distance.distancefunction.subspace;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.BitSet;
diff --git a/src/de/lmu/ifi/dbs/elki/distance/distancefunction/subspace/DiSHDistanceFunction.java b/src/de/lmu/ifi/dbs/elki/distance/distancefunction/subspace/DiSHDistanceFunction.java
index 2089b79b..8a58261d 100644
--- a/src/de/lmu/ifi/dbs/elki/distance/distancefunction/subspace/DiSHDistanceFunction.java
+++ b/src/de/lmu/ifi/dbs/elki/distance/distancefunction/subspace/DiSHDistanceFunction.java
@@ -1,32 +1,31 @@
package de.lmu.ifi.dbs.elki.distance.distancefunction.subspace;
-/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.BitSet;
import de.lmu.ifi.dbs.elki.data.NumberVector;
-import de.lmu.ifi.dbs.elki.data.type.TypeUtil;
-import de.lmu.ifi.dbs.elki.data.type.VectorFieldTypeInformation;
import de.lmu.ifi.dbs.elki.database.relation.Relation;
import de.lmu.ifi.dbs.elki.distance.distancevalue.PreferenceVectorBasedCorrelationDistance;
import de.lmu.ifi.dbs.elki.index.preprocessed.preference.DiSHPreferenceVectorIndex;
@@ -60,11 +59,6 @@ public class DiSHDistanceFunction extends AbstractPreferenceVectorBasedCorrelati
}
@Override
- public VectorFieldTypeInformation<? super NumberVector<?, ?>> getInputTypeRestriction() {
- return TypeUtil.NUMBER_VECTOR_FIELD;
- }
-
- @Override
public <T extends NumberVector<?, ?>> Instance<T> instantiate(Relation<T> database) {
// We can't really avoid these warnings, due to a limitation in Java
// Generics (AFAICT)
diff --git a/src/de/lmu/ifi/dbs/elki/distance/distancefunction/subspace/DimensionSelectingDistanceFunction.java b/src/de/lmu/ifi/dbs/elki/distance/distancefunction/subspace/DimensionSelectingDistanceFunction.java
index 6a9dd89e..83df84f1 100644
--- a/src/de/lmu/ifi/dbs/elki/distance/distancefunction/subspace/DimensionSelectingDistanceFunction.java
+++ b/src/de/lmu/ifi/dbs/elki/distance/distancefunction/subspace/DimensionSelectingDistanceFunction.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.distance.distancefunction.subspace;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.data.NumberVector;
import de.lmu.ifi.dbs.elki.data.spatial.SpatialComparable;
diff --git a/src/de/lmu/ifi/dbs/elki/distance/distancefunction/subspace/DimensionsSelectingEuclideanDistanceFunction.java b/src/de/lmu/ifi/dbs/elki/distance/distancefunction/subspace/DimensionsSelectingEuclideanDistanceFunction.java
index 8781f279..b9f52de9 100644
--- a/src/de/lmu/ifi/dbs/elki/distance/distancefunction/subspace/DimensionsSelectingEuclideanDistanceFunction.java
+++ b/src/de/lmu/ifi/dbs/elki/distance/distancefunction/subspace/DimensionsSelectingEuclideanDistanceFunction.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.distance.distancefunction.subspace;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.BitSet;
diff --git a/src/de/lmu/ifi/dbs/elki/distance/distancefunction/subspace/HiSCDistanceFunction.java b/src/de/lmu/ifi/dbs/elki/distance/distancefunction/subspace/HiSCDistanceFunction.java
index 42b1441f..dc8c01b2 100644
--- a/src/de/lmu/ifi/dbs/elki/distance/distancefunction/subspace/HiSCDistanceFunction.java
+++ b/src/de/lmu/ifi/dbs/elki/distance/distancefunction/subspace/HiSCDistanceFunction.java
@@ -1,32 +1,31 @@
package de.lmu.ifi.dbs.elki.distance.distancefunction.subspace;
-/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.BitSet;
import de.lmu.ifi.dbs.elki.data.NumberVector;
-import de.lmu.ifi.dbs.elki.data.type.TypeUtil;
-import de.lmu.ifi.dbs.elki.data.type.VectorFieldTypeInformation;
import de.lmu.ifi.dbs.elki.database.relation.Relation;
import de.lmu.ifi.dbs.elki.distance.distancevalue.PreferenceVectorBasedCorrelationDistance;
import de.lmu.ifi.dbs.elki.index.preprocessed.preference.HiSCPreferenceVectorIndex;
@@ -62,11 +61,6 @@ public class HiSCDistanceFunction<V extends NumberVector<?, ?>> extends Abstract
}
@Override
- public VectorFieldTypeInformation<? super NumberVector<?, ?>> getInputTypeRestriction() {
- return TypeUtil.NUMBER_VECTOR_FIELD;
- }
-
- @Override
public <T extends V> Instance<T> instantiate(Relation<T> database) {
// We can't really avoid these warnings, due to a limitation in Java
// Generics (AFAICT)
diff --git a/src/de/lmu/ifi/dbs/elki/distance/distancefunction/subspace/SubspaceDistanceFunction.java b/src/de/lmu/ifi/dbs/elki/distance/distancefunction/subspace/SubspaceDistanceFunction.java
index 32874879..1afced55 100644
--- a/src/de/lmu/ifi/dbs/elki/distance/distancefunction/subspace/SubspaceDistanceFunction.java
+++ b/src/de/lmu/ifi/dbs/elki/distance/distancefunction/subspace/SubspaceDistanceFunction.java
@@ -1,30 +1,29 @@
package de.lmu.ifi.dbs.elki.distance.distancefunction.subspace;
-/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.data.NumberVector;
-import de.lmu.ifi.dbs.elki.data.type.TypeUtil;
-import de.lmu.ifi.dbs.elki.data.type.VectorFieldTypeInformation;
import de.lmu.ifi.dbs.elki.database.ids.DBID;
import de.lmu.ifi.dbs.elki.database.relation.Relation;
import de.lmu.ifi.dbs.elki.distance.distancefunction.AbstractIndexBasedDistanceFunction;
@@ -65,11 +64,6 @@ public class SubspaceDistanceFunction extends AbstractIndexBasedDistanceFunction
}
@Override
- public VectorFieldTypeInformation<? super NumberVector<?, ?>> getInputTypeRestriction() {
- return TypeUtil.NUMBER_VECTOR_FIELD;
- }
-
- @Override
public <V extends NumberVector<?, ?>> Instance<V> instantiate(Relation<V> database) {
// We can't really avoid these warnings, due to a limitation in Java Generics (AFAICT)
@SuppressWarnings("unchecked")
diff --git a/src/de/lmu/ifi/dbs/elki/distance/distancefunction/timeseries/AbstractEditDistanceFunction.java b/src/de/lmu/ifi/dbs/elki/distance/distancefunction/timeseries/AbstractEditDistanceFunction.java
index fa35f189..3360e7ba 100644
--- a/src/de/lmu/ifi/dbs/elki/distance/distancefunction/timeseries/AbstractEditDistanceFunction.java
+++ b/src/de/lmu/ifi/dbs/elki/distance/distancefunction/timeseries/AbstractEditDistanceFunction.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.distance.distancefunction.timeseries;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.data.NumberVector;
import de.lmu.ifi.dbs.elki.data.type.TypeUtil;
diff --git a/src/de/lmu/ifi/dbs/elki/distance/distancefunction/timeseries/DTWDistanceFunction.java b/src/de/lmu/ifi/dbs/elki/distance/distancefunction/timeseries/DTWDistanceFunction.java
index b79baf65..2f0e9045 100644
--- a/src/de/lmu/ifi/dbs/elki/distance/distancefunction/timeseries/DTWDistanceFunction.java
+++ b/src/de/lmu/ifi/dbs/elki/distance/distancefunction/timeseries/DTWDistanceFunction.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.distance.distancefunction.timeseries;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.data.NumberVector;
import de.lmu.ifi.dbs.elki.distance.distancevalue.DoubleDistance;
diff --git a/src/de/lmu/ifi/dbs/elki/distance/distancefunction/timeseries/EDRDistanceFunction.java b/src/de/lmu/ifi/dbs/elki/distance/distancefunction/timeseries/EDRDistanceFunction.java
index a9914530..a0c20f6e 100644
--- a/src/de/lmu/ifi/dbs/elki/distance/distancefunction/timeseries/EDRDistanceFunction.java
+++ b/src/de/lmu/ifi/dbs/elki/distance/distancefunction/timeseries/EDRDistanceFunction.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.distance.distancefunction.timeseries;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.data.NumberVector;
import de.lmu.ifi.dbs.elki.distance.distancevalue.DoubleDistance;
diff --git a/src/de/lmu/ifi/dbs/elki/distance/distancefunction/timeseries/ERPDistanceFunction.java b/src/de/lmu/ifi/dbs/elki/distance/distancefunction/timeseries/ERPDistanceFunction.java
index 2a6831de..3d41e0c7 100644
--- a/src/de/lmu/ifi/dbs/elki/distance/distancefunction/timeseries/ERPDistanceFunction.java
+++ b/src/de/lmu/ifi/dbs/elki/distance/distancefunction/timeseries/ERPDistanceFunction.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.distance.distancefunction.timeseries;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.data.NumberVector;
import de.lmu.ifi.dbs.elki.distance.distancevalue.DoubleDistance;
diff --git a/src/de/lmu/ifi/dbs/elki/distance/distancefunction/timeseries/LCSSDistanceFunction.java b/src/de/lmu/ifi/dbs/elki/distance/distancefunction/timeseries/LCSSDistanceFunction.java
index 1625a2b8..3264db7e 100644
--- a/src/de/lmu/ifi/dbs/elki/distance/distancefunction/timeseries/LCSSDistanceFunction.java
+++ b/src/de/lmu/ifi/dbs/elki/distance/distancefunction/timeseries/LCSSDistanceFunction.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.distance.distancefunction.timeseries;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.data.NumberVector;
import de.lmu.ifi.dbs.elki.data.VectorUtil;
diff --git a/src/de/lmu/ifi/dbs/elki/distance/distancevalue/AbstractDistance.java b/src/de/lmu/ifi/dbs/elki/distance/distancevalue/AbstractDistance.java
index ad642dce..b239cea2 100644
--- a/src/de/lmu/ifi/dbs/elki/distance/distancevalue/AbstractDistance.java
+++ b/src/de/lmu/ifi/dbs/elki/distance/distancevalue/AbstractDistance.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.distance.distancevalue;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.regex.Pattern;
diff --git a/src/de/lmu/ifi/dbs/elki/distance/distancevalue/BitDistance.java b/src/de/lmu/ifi/dbs/elki/distance/distancevalue/BitDistance.java
index db6cbdbe..9b579452 100644
--- a/src/de/lmu/ifi/dbs/elki/distance/distancevalue/BitDistance.java
+++ b/src/de/lmu/ifi/dbs/elki/distance/distancevalue/BitDistance.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.distance.distancevalue;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.data.Bit;
import de.lmu.ifi.dbs.elki.utilities.exceptions.ExceptionMessages;
diff --git a/src/de/lmu/ifi/dbs/elki/distance/distancevalue/CorrelationDistance.java b/src/de/lmu/ifi/dbs/elki/distance/distancevalue/CorrelationDistance.java
index 79cbceea..4a15ab80 100644
--- a/src/de/lmu/ifi/dbs/elki/distance/distancevalue/CorrelationDistance.java
+++ b/src/de/lmu/ifi/dbs/elki/distance/distancevalue/CorrelationDistance.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.distance.distancevalue;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.io.IOException;
import java.io.ObjectInput;
diff --git a/src/de/lmu/ifi/dbs/elki/distance/distancevalue/Distance.java b/src/de/lmu/ifi/dbs/elki/distance/distancevalue/Distance.java
index 861a7d74..838dcfd6 100644
--- a/src/de/lmu/ifi/dbs/elki/distance/distancevalue/Distance.java
+++ b/src/de/lmu/ifi/dbs/elki/distance/distancevalue/Distance.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.distance.distancevalue;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.io.Externalizable;
diff --git a/src/de/lmu/ifi/dbs/elki/distance/distancevalue/DoubleDistance.java b/src/de/lmu/ifi/dbs/elki/distance/distancevalue/DoubleDistance.java
index 5a74f225..102fcc94 100644
--- a/src/de/lmu/ifi/dbs/elki/distance/distancevalue/DoubleDistance.java
+++ b/src/de/lmu/ifi/dbs/elki/distance/distancevalue/DoubleDistance.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.distance.distancevalue;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.io.IOException;
import java.io.ObjectInput;
diff --git a/src/de/lmu/ifi/dbs/elki/distance/distancevalue/FloatDistance.java b/src/de/lmu/ifi/dbs/elki/distance/distancevalue/FloatDistance.java
index a73529b5..87fca22f 100644
--- a/src/de/lmu/ifi/dbs/elki/distance/distancevalue/FloatDistance.java
+++ b/src/de/lmu/ifi/dbs/elki/distance/distancevalue/FloatDistance.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.distance.distancevalue;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.io.IOException;
import java.io.ObjectInput;
diff --git a/src/de/lmu/ifi/dbs/elki/distance/distancevalue/IntegerDistance.java b/src/de/lmu/ifi/dbs/elki/distance/distancevalue/IntegerDistance.java
index c2129c2c..0eb77593 100644
--- a/src/de/lmu/ifi/dbs/elki/distance/distancevalue/IntegerDistance.java
+++ b/src/de/lmu/ifi/dbs/elki/distance/distancevalue/IntegerDistance.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.distance.distancevalue;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.io.IOException;
import java.io.ObjectInput;
diff --git a/src/de/lmu/ifi/dbs/elki/distance/distancevalue/NumberDistance.java b/src/de/lmu/ifi/dbs/elki/distance/distancevalue/NumberDistance.java
index cfe69242..b5b534ee 100644
--- a/src/de/lmu/ifi/dbs/elki/distance/distancevalue/NumberDistance.java
+++ b/src/de/lmu/ifi/dbs/elki/distance/distancevalue/NumberDistance.java
@@ -1,26 +1,28 @@
package de.lmu.ifi.dbs.elki.distance.distancevalue;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
/**
* Provides a Distance for a number-valued distance.
diff --git a/src/de/lmu/ifi/dbs/elki/distance/distancevalue/PCACorrelationDistance.java b/src/de/lmu/ifi/dbs/elki/distance/distancevalue/PCACorrelationDistance.java
index 12388062..ff7b6bf4 100644
--- a/src/de/lmu/ifi/dbs/elki/distance/distancevalue/PCACorrelationDistance.java
+++ b/src/de/lmu/ifi/dbs/elki/distance/distancevalue/PCACorrelationDistance.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.distance.distancevalue;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.regex.Pattern;
diff --git a/src/de/lmu/ifi/dbs/elki/distance/distancevalue/PreferenceVectorBasedCorrelationDistance.java b/src/de/lmu/ifi/dbs/elki/distance/distancevalue/PreferenceVectorBasedCorrelationDistance.java
index 56de1b51..694650cf 100644
--- a/src/de/lmu/ifi/dbs/elki/distance/distancevalue/PreferenceVectorBasedCorrelationDistance.java
+++ b/src/de/lmu/ifi/dbs/elki/distance/distancevalue/PreferenceVectorBasedCorrelationDistance.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.distance.distancevalue;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.io.IOException;
import java.io.ObjectInput;
diff --git a/src/de/lmu/ifi/dbs/elki/distance/distancevalue/SubspaceDistance.java b/src/de/lmu/ifi/dbs/elki/distance/distancevalue/SubspaceDistance.java
index 8122037b..cb929c44 100644
--- a/src/de/lmu/ifi/dbs/elki/distance/distancevalue/SubspaceDistance.java
+++ b/src/de/lmu/ifi/dbs/elki/distance/distancevalue/SubspaceDistance.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.distance.distancevalue;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.io.IOException;
import java.io.ObjectInput;
diff --git a/src/de/lmu/ifi/dbs/elki/distance/similarityfunction/AbstractDBIDSimilarityFunction.java b/src/de/lmu/ifi/dbs/elki/distance/similarityfunction/AbstractDBIDSimilarityFunction.java
index 48d9ca99..12a39916 100644
--- a/src/de/lmu/ifi/dbs/elki/distance/similarityfunction/AbstractDBIDSimilarityFunction.java
+++ b/src/de/lmu/ifi/dbs/elki/distance/similarityfunction/AbstractDBIDSimilarityFunction.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.distance.similarityfunction;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.database.ids.DBID;
import de.lmu.ifi.dbs.elki.database.relation.Relation;
diff --git a/src/de/lmu/ifi/dbs/elki/distance/similarityfunction/AbstractIndexBasedSimilarityFunction.java b/src/de/lmu/ifi/dbs/elki/distance/similarityfunction/AbstractIndexBasedSimilarityFunction.java
index 38a33be0..ad065c68 100644
--- a/src/de/lmu/ifi/dbs/elki/distance/similarityfunction/AbstractIndexBasedSimilarityFunction.java
+++ b/src/de/lmu/ifi/dbs/elki/distance/similarityfunction/AbstractIndexBasedSimilarityFunction.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.distance.similarityfunction;
-/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.data.type.TypeInformation;
import de.lmu.ifi.dbs.elki.database.query.similarity.AbstractDBIDSimilarityQuery;
@@ -81,7 +82,7 @@ public abstract class AbstractIndexBasedSimilarityFunction<O, I extends Index, R
}
@Override
- public TypeInformation getInputTypeRestriction() {
+ final public TypeInformation getInputTypeRestriction() {
return indexFactory.getInputTypeRestriction();
}
diff --git a/src/de/lmu/ifi/dbs/elki/distance/similarityfunction/AbstractPrimitiveSimilarityFunction.java b/src/de/lmu/ifi/dbs/elki/distance/similarityfunction/AbstractPrimitiveSimilarityFunction.java
index f351c295..a37efe9d 100644
--- a/src/de/lmu/ifi/dbs/elki/distance/similarityfunction/AbstractPrimitiveSimilarityFunction.java
+++ b/src/de/lmu/ifi/dbs/elki/distance/similarityfunction/AbstractPrimitiveSimilarityFunction.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.distance.similarityfunction;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.data.type.SimpleTypeInformation;
import de.lmu.ifi.dbs.elki.database.query.similarity.PrimitiveSimilarityQuery;
diff --git a/src/de/lmu/ifi/dbs/elki/distance/similarityfunction/DBIDSimilarityFunction.java b/src/de/lmu/ifi/dbs/elki/distance/similarityfunction/DBIDSimilarityFunction.java
index 2af3db8e..d93c93f9 100644
--- a/src/de/lmu/ifi/dbs/elki/distance/similarityfunction/DBIDSimilarityFunction.java
+++ b/src/de/lmu/ifi/dbs/elki/distance/similarityfunction/DBIDSimilarityFunction.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.distance.similarityfunction;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.database.ids.DBID;
import de.lmu.ifi.dbs.elki.distance.distancevalue.Distance;
diff --git a/src/de/lmu/ifi/dbs/elki/distance/similarityfunction/FractionalSharedNearestNeighborSimilarityFunction.java b/src/de/lmu/ifi/dbs/elki/distance/similarityfunction/FractionalSharedNearestNeighborSimilarityFunction.java
index 0c6df957..c909cd6c 100644
--- a/src/de/lmu/ifi/dbs/elki/distance/similarityfunction/FractionalSharedNearestNeighborSimilarityFunction.java
+++ b/src/de/lmu/ifi/dbs/elki/distance/similarityfunction/FractionalSharedNearestNeighborSimilarityFunction.java
@@ -1,33 +1,33 @@
package de.lmu.ifi.dbs.elki.distance.similarityfunction;
-/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.Iterator;
import de.lmu.ifi.dbs.elki.database.ids.DBID;
import de.lmu.ifi.dbs.elki.database.ids.TreeSetDBIDs;
import de.lmu.ifi.dbs.elki.database.relation.Relation;
-import de.lmu.ifi.dbs.elki.distance.distancevalue.Distance;
import de.lmu.ifi.dbs.elki.distance.distancevalue.DoubleDistance;
import de.lmu.ifi.dbs.elki.index.preprocessed.snn.SharedNearestNeighborIndex;
import de.lmu.ifi.dbs.elki.index.preprocessed.snn.SharedNearestNeighborPreprocessor;
@@ -39,14 +39,15 @@ import de.lmu.ifi.dbs.elki.utilities.optionhandling.parameterization.Parameteriz
*
* @author Arthur Zimek
*
- * @apiviz.has de.lmu.ifi.dbs.elki.index.preprocessed.snn.SharedNearestNeighborIndex.Factory
+ * @apiviz.has
+ * de.lmu.ifi.dbs.elki.index.preprocessed.snn.SharedNearestNeighborIndex
+ * .Factory
* @apiviz.uses Instance oneway - - «create»
*
* @param <O> object type
- * @param <D> distance type
*/
// todo arthur comment class
-public class FractionalSharedNearestNeighborSimilarityFunction<O, D extends Distance<D>> extends AbstractIndexBasedSimilarityFunction<O, SharedNearestNeighborIndex<O>, TreeSetDBIDs, DoubleDistance> implements NormalizedSimilarityFunction<O, DoubleDistance> {
+public class FractionalSharedNearestNeighborSimilarityFunction<O> extends AbstractIndexBasedSimilarityFunction<O, SharedNearestNeighborIndex<O>, TreeSetDBIDs, DoubleDistance> implements NormalizedSimilarityFunction<O, DoubleDistance> {
/**
* Constructor.
*
@@ -58,9 +59,9 @@ public class FractionalSharedNearestNeighborSimilarityFunction<O, D extends Dist
@SuppressWarnings("unchecked")
@Override
- public <T extends O> Instance<T, D> instantiate(Relation<T> database) {
+ public <T extends O> Instance<T> instantiate(Relation<T> database) {
SharedNearestNeighborIndex<O> indexi = indexFactory.instantiate((Relation<O>) database);
- return (Instance<T, D>) new Instance<O, D>((Relation<O>) database, indexi, indexi.getNumberOfNeighbors());
+ return (Instance<T>) new Instance<O>((Relation<O>) database, indexi);
}
/**
@@ -71,70 +72,36 @@ public class FractionalSharedNearestNeighborSimilarityFunction<O, D extends Dist
* @apiviz.uses SharedNearestNeighborIndex
*
* @param <T> Object type
- * @param <D> Distance type
*/
- public static class Instance<T, D extends Distance<D>> extends AbstractIndexBasedSimilarityFunction.Instance<T, SharedNearestNeighborIndex<T>, TreeSetDBIDs, DoubleDistance> {
- /**
- * Holds the number of nearest neighbors to be used.
- */
- private final int numberOfNeighbors;
-
+ public static class Instance<T> extends AbstractIndexBasedSimilarityFunction.Instance<T, SharedNearestNeighborIndex<T>, TreeSetDBIDs, DoubleDistance> {
/**
* Constructor.
*
* @param database Database
* @param preprocessor Preprocessor
- * @param numberOfNeighbors Neighborhood size
*/
- public Instance(Relation<T> database, SharedNearestNeighborIndex<T> preprocessor, int numberOfNeighbors) {
+ public Instance(Relation<T> database, SharedNearestNeighborIndex<T> preprocessor) {
super(database, preprocessor);
- this.numberOfNeighbors = numberOfNeighbors;
}
static protected int countSharedNeighbors(TreeSetDBIDs neighbors1, TreeSetDBIDs neighbors2) {
int intersection = 0;
Iterator<DBID> iter1 = neighbors1.iterator();
Iterator<DBID> iter2 = neighbors2.iterator();
- DBID neighbors1ID = null;
- DBID neighbors2ID = null;
- if(iter1.hasNext()) {
- neighbors1ID = iter1.next();
- }
- if(iter2.hasNext()) {
- neighbors2ID = iter2.next();
- }
- while((iter1.hasNext() || iter2.hasNext()) && neighbors1ID != null && neighbors2ID != null) {
+ DBID neighbors1ID = iter1.hasNext() ? iter1.next() : null;
+ DBID neighbors2ID = iter2.hasNext() ? iter2.next() : null;
+ while(neighbors1ID != null && neighbors2ID != null) {
if(neighbors1ID.equals(neighbors2ID)) {
intersection++;
- if(iter1.hasNext()) {
- neighbors1ID = iter1.next();
- }
- else {
- neighbors1ID = null;
- }
- if(iter2.hasNext()) {
- neighbors2ID = iter2.next();
- }
- else {
- neighbors2ID = null;
- }
+ neighbors1ID = iter1.hasNext() ? iter1.next() : null;
+ neighbors2ID = iter2.hasNext() ? iter2.next() : null;
}
else if(neighbors2ID.compareTo(neighbors1ID) > 0) {
- if(iter1.hasNext()) {
- neighbors1ID = iter1.next();
- }
- else {
- neighbors1ID = null;
- }
+ neighbors1ID = iter1.hasNext() ? iter1.next() : null;
}
else // neighbors1ID > neighbors2ID
{
- if(iter2.hasNext()) {
- neighbors2ID = iter2.next();
- }
- else {
- neighbors2ID = null;
- }
+ neighbors2ID = iter2.hasNext() ? iter2.next() : null;
}
}
return intersection;
@@ -145,7 +112,7 @@ public class FractionalSharedNearestNeighborSimilarityFunction<O, D extends Dist
TreeSetDBIDs neighbors1 = index.getNearestNeighborSet(id1);
TreeSetDBIDs neighbors2 = index.getNearestNeighborSet(id2);
int intersection = countSharedNeighbors(neighbors1, neighbors2);
- return new DoubleDistance((double) intersection / numberOfNeighbors);
+ return new DoubleDistance((double) intersection / index.getNumberOfNeighbors());
}
@Override
@@ -165,8 +132,10 @@ public class FractionalSharedNearestNeighborSimilarityFunction<O, D extends Dist
* @author Erich Schubert
*
* @apiviz.exclude
+ *
+ * @param <O> object type
*/
- public static class Parameterizer<O, D extends Distance<D>> extends AbstractIndexBasedSimilarityFunction.Parameterizer<SharedNearestNeighborIndex.Factory<O, SharedNearestNeighborIndex<O>>> {
+ public static class Parameterizer<O> extends AbstractIndexBasedSimilarityFunction.Parameterizer<SharedNearestNeighborIndex.Factory<O, SharedNearestNeighborIndex<O>>> {
@Override
protected void makeOptions(Parameterization config) {
super.makeOptions(config);
@@ -174,8 +143,8 @@ public class FractionalSharedNearestNeighborSimilarityFunction<O, D extends Dist
}
@Override
- protected FractionalSharedNearestNeighborSimilarityFunction<O, D> makeInstance() {
- return new FractionalSharedNearestNeighborSimilarityFunction<O, D>(factory);
+ protected FractionalSharedNearestNeighborSimilarityFunction<O> makeInstance() {
+ return new FractionalSharedNearestNeighborSimilarityFunction<O>(factory);
}
}
} \ No newline at end of file
diff --git a/src/de/lmu/ifi/dbs/elki/distance/similarityfunction/IndexBasedSimilarityFunction.java b/src/de/lmu/ifi/dbs/elki/distance/similarityfunction/IndexBasedSimilarityFunction.java
index 33651e3e..95d854c0 100644
--- a/src/de/lmu/ifi/dbs/elki/distance/similarityfunction/IndexBasedSimilarityFunction.java
+++ b/src/de/lmu/ifi/dbs/elki/distance/similarityfunction/IndexBasedSimilarityFunction.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.distance.similarityfunction;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.database.query.similarity.SimilarityQuery;
import de.lmu.ifi.dbs.elki.database.relation.Relation;
diff --git a/src/de/lmu/ifi/dbs/elki/distance/similarityfunction/NormalizedPrimitiveSimilarityFunction.java b/src/de/lmu/ifi/dbs/elki/distance/similarityfunction/NormalizedPrimitiveSimilarityFunction.java
index 7b7d2e59..f5347e71 100644
--- a/src/de/lmu/ifi/dbs/elki/distance/similarityfunction/NormalizedPrimitiveSimilarityFunction.java
+++ b/src/de/lmu/ifi/dbs/elki/distance/similarityfunction/NormalizedPrimitiveSimilarityFunction.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.distance.similarityfunction;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.distance.distancevalue.Distance;
diff --git a/src/de/lmu/ifi/dbs/elki/distance/similarityfunction/NormalizedSimilarityFunction.java b/src/de/lmu/ifi/dbs/elki/distance/similarityfunction/NormalizedSimilarityFunction.java
index f746b1b4..5979ad3f 100644
--- a/src/de/lmu/ifi/dbs/elki/distance/similarityfunction/NormalizedSimilarityFunction.java
+++ b/src/de/lmu/ifi/dbs/elki/distance/similarityfunction/NormalizedSimilarityFunction.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.distance.similarityfunction;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.distance.distancevalue.Distance;
diff --git a/src/de/lmu/ifi/dbs/elki/distance/similarityfunction/PrimitiveSimilarityFunction.java b/src/de/lmu/ifi/dbs/elki/distance/similarityfunction/PrimitiveSimilarityFunction.java
index 606aea9a..edb57ca0 100644
--- a/src/de/lmu/ifi/dbs/elki/distance/similarityfunction/PrimitiveSimilarityFunction.java
+++ b/src/de/lmu/ifi/dbs/elki/distance/similarityfunction/PrimitiveSimilarityFunction.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.distance.similarityfunction;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.data.type.SimpleTypeInformation;
import de.lmu.ifi.dbs.elki.distance.distancevalue.Distance;
diff --git a/src/de/lmu/ifi/dbs/elki/distance/similarityfunction/SharedNearestNeighborSimilarityFunction.java b/src/de/lmu/ifi/dbs/elki/distance/similarityfunction/SharedNearestNeighborSimilarityFunction.java
index 82334e05..74c2534c 100644
--- a/src/de/lmu/ifi/dbs/elki/distance/similarityfunction/SharedNearestNeighborSimilarityFunction.java
+++ b/src/de/lmu/ifi/dbs/elki/distance/similarityfunction/SharedNearestNeighborSimilarityFunction.java
@@ -1,33 +1,33 @@
package de.lmu.ifi.dbs.elki.distance.similarityfunction;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.Iterator;
import de.lmu.ifi.dbs.elki.database.ids.DBID;
import de.lmu.ifi.dbs.elki.database.ids.SetDBIDs;
import de.lmu.ifi.dbs.elki.database.relation.Relation;
-import de.lmu.ifi.dbs.elki.distance.distancevalue.Distance;
import de.lmu.ifi.dbs.elki.distance.distancevalue.IntegerDistance;
import de.lmu.ifi.dbs.elki.index.preprocessed.snn.SharedNearestNeighborIndex;
import de.lmu.ifi.dbs.elki.index.preprocessed.snn.SharedNearestNeighborPreprocessor;
@@ -43,10 +43,9 @@ import de.lmu.ifi.dbs.elki.utilities.optionhandling.parameterization.Parameteriz
* @apiviz.uses Instance oneway - - «create»
*
* @param <O> object type
- * @param <D> distance type
*/
// todo arthur comment class
-public class SharedNearestNeighborSimilarityFunction<O, D extends Distance<D>> extends AbstractIndexBasedSimilarityFunction<O, SharedNearestNeighborIndex<O>, SetDBIDs, IntegerDistance> {
+public class SharedNearestNeighborSimilarityFunction<O> extends AbstractIndexBasedSimilarityFunction<O, SharedNearestNeighborIndex<O>, SetDBIDs, IntegerDistance> {
/**
* Constructor.
*
@@ -65,46 +64,20 @@ public class SharedNearestNeighborSimilarityFunction<O, D extends Distance<D>> e
int intersection = 0;
Iterator<DBID> iter1 = neighbors1.iterator();
Iterator<DBID> iter2 = neighbors2.iterator();
- DBID neighbors1ID = null;
- DBID neighbors2ID = null;
- if(iter1.hasNext()) {
- neighbors1ID = iter1.next();
- }
- if(iter2.hasNext()) {
- neighbors2ID = iter2.next();
- }
+ DBID neighbors1ID = iter1.hasNext() ? iter1.next() : null;
+ DBID neighbors2ID = iter2.hasNext() ? iter2.next() : null;
while((iter1.hasNext() || iter2.hasNext()) && neighbors1ID != null && neighbors2ID != null) {
if(neighbors1ID.equals(neighbors2ID)) {
intersection++;
- if(iter1.hasNext()) {
- neighbors1ID = iter1.next();
- }
- else {
- neighbors1ID = null;
- }
- if(iter2.hasNext()) {
- neighbors2ID = iter2.next();
- }
- else {
- neighbors2ID = null;
- }
+ neighbors1ID = iter1.hasNext() ? iter1.next() : null;
+ neighbors2ID = iter2.hasNext() ? iter2.next() : null;
}
else if(neighbors2ID.compareTo(neighbors1ID) > 0) {
- if(iter1.hasNext()) {
- neighbors1ID = iter1.next();
- }
- else {
- neighbors1ID = null;
- }
+ neighbors1ID = iter1.hasNext() ? iter1.next() : null;
}
else // neighbors1ID > neighbors2ID
{
- if(iter2.hasNext()) {
- neighbors2ID = iter2.next();
- }
- else {
- neighbors2ID = null;
- }
+ neighbors2ID = iter2.hasNext() ? iter2.next() : null;
}
}
return intersection;
@@ -112,21 +85,27 @@ public class SharedNearestNeighborSimilarityFunction<O, D extends Distance<D>> e
@SuppressWarnings("unchecked")
@Override
- public <T extends O> Instance<T, D> instantiate(Relation<T> database) {
+ public <T extends O> Instance<T> instantiate(Relation<T> database) {
SharedNearestNeighborIndex<O> indexi = indexFactory.instantiate((Relation<O>) database);
- return (Instance<T, D>) new Instance<O, D>((Relation<O>) database, indexi);
+ return (Instance<T>) new Instance<O>((Relation<O>) database, indexi);
}
/**
- * TODO: document
+ * Instance for a particular database.
*
* @author Erich Schubert
*
* @apiviz.uses SharedNearestNeighborIndex
*
- * @param <D>
+ * @param <O> Object type
*/
- public static class Instance<O, D extends Distance<D>> extends AbstractIndexBasedSimilarityFunction.Instance<O, SharedNearestNeighborIndex<O>, SetDBIDs, IntegerDistance> {
+ public static class Instance<O> extends AbstractIndexBasedSimilarityFunction.Instance<O, SharedNearestNeighborIndex<O>, SetDBIDs, IntegerDistance> {
+ /**
+ * Constructor.
+ *
+ * @param database Database
+ * @param preprocessor Index
+ */
public Instance(Relation<O> database, SharedNearestNeighborIndex<O> preprocessor) {
super(database, preprocessor);
}
@@ -150,8 +129,10 @@ public class SharedNearestNeighborSimilarityFunction<O, D extends Distance<D>> e
* @author Erich Schubert
*
* @apiviz.exclude
+ *
+ * @param <O> Object type
*/
- public static class Parameterizer<O, D extends Distance<D>> extends AbstractIndexBasedSimilarityFunction.Parameterizer<SharedNearestNeighborIndex.Factory<O, SharedNearestNeighborIndex<O>>> {
+ public static class Parameterizer<O> extends AbstractIndexBasedSimilarityFunction.Parameterizer<SharedNearestNeighborIndex.Factory<O, SharedNearestNeighborIndex<O>>> {
@Override
protected void makeOptions(Parameterization config) {
super.makeOptions(config);
@@ -159,8 +140,8 @@ public class SharedNearestNeighborSimilarityFunction<O, D extends Distance<D>> e
}
@Override
- protected SharedNearestNeighborSimilarityFunction<O, D> makeInstance() {
- return new SharedNearestNeighborSimilarityFunction<O, D>(factory);
+ protected SharedNearestNeighborSimilarityFunction<O> makeInstance() {
+ return new SharedNearestNeighborSimilarityFunction<O>(factory);
}
}
} \ No newline at end of file
diff --git a/src/de/lmu/ifi/dbs/elki/distance/similarityfunction/SimilarityFunction.java b/src/de/lmu/ifi/dbs/elki/distance/similarityfunction/SimilarityFunction.java
index 374d451f..687d17d7 100644
--- a/src/de/lmu/ifi/dbs/elki/distance/similarityfunction/SimilarityFunction.java
+++ b/src/de/lmu/ifi/dbs/elki/distance/similarityfunction/SimilarityFunction.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.distance.similarityfunction;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.data.type.TypeInformation;
import de.lmu.ifi.dbs.elki.database.query.similarity.SimilarityQuery;
diff --git a/src/de/lmu/ifi/dbs/elki/distance/similarityfunction/kernel/FooKernelFunction.java b/src/de/lmu/ifi/dbs/elki/distance/similarityfunction/kernel/FooKernelFunction.java
index 088d0554..24a9efda 100644
--- a/src/de/lmu/ifi/dbs/elki/distance/similarityfunction/kernel/FooKernelFunction.java
+++ b/src/de/lmu/ifi/dbs/elki/distance/similarityfunction/kernel/FooKernelFunction.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.distance.similarityfunction.kernel;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.data.NumberVector;
import de.lmu.ifi.dbs.elki.data.type.TypeUtil;
diff --git a/src/de/lmu/ifi/dbs/elki/distance/similarityfunction/kernel/KernelMatrix.java b/src/de/lmu/ifi/dbs/elki/distance/similarityfunction/kernel/KernelMatrix.java
index 77b1cbb1..c41a2e91 100644
--- a/src/de/lmu/ifi/dbs/elki/distance/similarityfunction/kernel/KernelMatrix.java
+++ b/src/de/lmu/ifi/dbs/elki/distance/similarityfunction/kernel/KernelMatrix.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.distance.similarityfunction.kernel;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.Collection;
import java.util.Iterator;
diff --git a/src/de/lmu/ifi/dbs/elki/distance/similarityfunction/kernel/LinearKernelFunction.java b/src/de/lmu/ifi/dbs/elki/distance/similarityfunction/kernel/LinearKernelFunction.java
index 4cda9568..7d3f85d3 100644
--- a/src/de/lmu/ifi/dbs/elki/distance/similarityfunction/kernel/LinearKernelFunction.java
+++ b/src/de/lmu/ifi/dbs/elki/distance/similarityfunction/kernel/LinearKernelFunction.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.distance.similarityfunction.kernel;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.data.NumberVector;
import de.lmu.ifi.dbs.elki.data.type.TypeUtil;
diff --git a/src/de/lmu/ifi/dbs/elki/distance/similarityfunction/kernel/PolynomialKernelFunction.java b/src/de/lmu/ifi/dbs/elki/distance/similarityfunction/kernel/PolynomialKernelFunction.java
index 1856f86a..c3ad7e3e 100644
--- a/src/de/lmu/ifi/dbs/elki/distance/similarityfunction/kernel/PolynomialKernelFunction.java
+++ b/src/de/lmu/ifi/dbs/elki/distance/similarityfunction/kernel/PolynomialKernelFunction.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.distance.similarityfunction.kernel;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.data.NumberVector;
import de.lmu.ifi.dbs.elki.data.type.TypeUtil;
diff --git a/src/de/lmu/ifi/dbs/elki/evaluation/Evaluator.java b/src/de/lmu/ifi/dbs/elki/evaluation/Evaluator.java
index 25b25c66..f9be3e82 100644
--- a/src/de/lmu/ifi/dbs/elki/evaluation/Evaluator.java
+++ b/src/de/lmu/ifi/dbs/elki/evaluation/Evaluator.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.evaluation;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.result.ResultProcessor;
diff --git a/src/de/lmu/ifi/dbs/elki/evaluation/index/IndexStatistics.java b/src/de/lmu/ifi/dbs/elki/evaluation/index/IndexStatistics.java
index 906ea4b7..dc311612 100644
--- a/src/de/lmu/ifi/dbs/elki/evaluation/index/IndexStatistics.java
+++ b/src/de/lmu/ifi/dbs/elki/evaluation/index/IndexStatistics.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.evaluation.index;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.ArrayList;
import java.util.Collection;
diff --git a/src/de/lmu/ifi/dbs/elki/evaluation/outlier/JudgeOutlierScores.java b/src/de/lmu/ifi/dbs/elki/evaluation/outlier/JudgeOutlierScores.java
index 24b7e49b..c5762308 100644
--- a/src/de/lmu/ifi/dbs/elki/evaluation/outlier/JudgeOutlierScores.java
+++ b/src/de/lmu/ifi/dbs/elki/evaluation/outlier/JudgeOutlierScores.java
@@ -176,7 +176,7 @@ public class JudgeOutlierScores implements Evaluator {
return;
}
- ModifiableDBIDs ids = DBIDUtil.newHashSet(db.getDBIDs());
+ ModifiableDBIDs ids = DBIDUtil.newHashSet(ors.iterator().next().getScores().getDBIDs());
DBIDs outlierIds = DatabaseUtil.getObjectsByLabelMatch(db, positiveClassName);
ids.removeDBIDs(outlierIds);
diff --git a/src/de/lmu/ifi/dbs/elki/evaluation/paircounting/EvaluatePairCountingFMeasure.java b/src/de/lmu/ifi/dbs/elki/evaluation/paircounting/EvaluatePairCountingFMeasure.java
index 43de1cb7..e47dbcec 100644
--- a/src/de/lmu/ifi/dbs/elki/evaluation/paircounting/EvaluatePairCountingFMeasure.java
+++ b/src/de/lmu/ifi/dbs/elki/evaluation/paircounting/EvaluatePairCountingFMeasure.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.evaluation.paircounting;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.ArrayList;
import java.util.Collection;
diff --git a/src/de/lmu/ifi/dbs/elki/evaluation/paircounting/PairCountingFMeasure.java b/src/de/lmu/ifi/dbs/elki/evaluation/paircounting/PairCountingFMeasure.java
index aae966fe..4e1d5f01 100644
--- a/src/de/lmu/ifi/dbs/elki/evaluation/paircounting/PairCountingFMeasure.java
+++ b/src/de/lmu/ifi/dbs/elki/evaluation/paircounting/PairCountingFMeasure.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.evaluation.paircounting;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.Collection;
diff --git a/src/de/lmu/ifi/dbs/elki/evaluation/paircounting/generator/PairGeneratorMerge.java b/src/de/lmu/ifi/dbs/elki/evaluation/paircounting/generator/PairGeneratorMerge.java
index 70ec1c33..88297ebc 100644
--- a/src/de/lmu/ifi/dbs/elki/evaluation/paircounting/generator/PairGeneratorMerge.java
+++ b/src/de/lmu/ifi/dbs/elki/evaluation/paircounting/generator/PairGeneratorMerge.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.evaluation.paircounting.generator;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.utilities.pairs.IntIntPair;
diff --git a/src/de/lmu/ifi/dbs/elki/evaluation/paircounting/generator/PairGeneratorNoise.java b/src/de/lmu/ifi/dbs/elki/evaluation/paircounting/generator/PairGeneratorNoise.java
index 0680f15b..7d3ad8c0 100644
--- a/src/de/lmu/ifi/dbs/elki/evaluation/paircounting/generator/PairGeneratorNoise.java
+++ b/src/de/lmu/ifi/dbs/elki/evaluation/paircounting/generator/PairGeneratorNoise.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.evaluation.paircounting.generator;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.Arrays;
diff --git a/src/de/lmu/ifi/dbs/elki/evaluation/paircounting/generator/PairGeneratorSingleCluster.java b/src/de/lmu/ifi/dbs/elki/evaluation/paircounting/generator/PairGeneratorSingleCluster.java
index cc9b4fb7..da769837 100644
--- a/src/de/lmu/ifi/dbs/elki/evaluation/paircounting/generator/PairGeneratorSingleCluster.java
+++ b/src/de/lmu/ifi/dbs/elki/evaluation/paircounting/generator/PairGeneratorSingleCluster.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.evaluation.paircounting.generator;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.Arrays;
diff --git a/src/de/lmu/ifi/dbs/elki/evaluation/paircounting/generator/PairSortedGenerator.java b/src/de/lmu/ifi/dbs/elki/evaluation/paircounting/generator/PairSortedGenerator.java
index 39ad7452..6c342bc9 100644
--- a/src/de/lmu/ifi/dbs/elki/evaluation/paircounting/generator/PairSortedGenerator.java
+++ b/src/de/lmu/ifi/dbs/elki/evaluation/paircounting/generator/PairSortedGenerator.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.evaluation.paircounting.generator;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.utilities.pairs.IntIntPair;
diff --git a/src/de/lmu/ifi/dbs/elki/evaluation/paircounting/generator/PairSortedGeneratorInterface.java b/src/de/lmu/ifi/dbs/elki/evaluation/paircounting/generator/PairSortedGeneratorInterface.java
index 2cdad2be..f7b67d60 100644
--- a/src/de/lmu/ifi/dbs/elki/evaluation/paircounting/generator/PairSortedGeneratorInterface.java
+++ b/src/de/lmu/ifi/dbs/elki/evaluation/paircounting/generator/PairSortedGeneratorInterface.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.evaluation.paircounting.generator;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.utilities.pairs.IntIntPair;
diff --git a/src/de/lmu/ifi/dbs/elki/evaluation/roc/ComputeROCCurve.java b/src/de/lmu/ifi/dbs/elki/evaluation/roc/ComputeROCCurve.java
index 345f1e1f..08dd38a5 100644
--- a/src/de/lmu/ifi/dbs/elki/evaluation/roc/ComputeROCCurve.java
+++ b/src/de/lmu/ifi/dbs/elki/evaluation/roc/ComputeROCCurve.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.evaluation.roc;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.ArrayList;
import java.util.Collection;
diff --git a/src/de/lmu/ifi/dbs/elki/evaluation/roc/ROC.java b/src/de/lmu/ifi/dbs/elki/evaluation/roc/ROC.java
index d127318f..9716a586 100644
--- a/src/de/lmu/ifi/dbs/elki/evaluation/roc/ROC.java
+++ b/src/de/lmu/ifi/dbs/elki/evaluation/roc/ROC.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.evaluation.roc;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.ArrayList;
import java.util.Iterator;
diff --git a/src/de/lmu/ifi/dbs/elki/evaluation/similaritymatrix/ComputeSimilarityMatrixImage.java b/src/de/lmu/ifi/dbs/elki/evaluation/similaritymatrix/ComputeSimilarityMatrixImage.java
index 8f49f491..9408be91 100644
--- a/src/de/lmu/ifi/dbs/elki/evaluation/similaritymatrix/ComputeSimilarityMatrixImage.java
+++ b/src/de/lmu/ifi/dbs/elki/evaluation/similaritymatrix/ComputeSimilarityMatrixImage.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.evaluation.similaritymatrix;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.awt.image.BufferedImage;
import java.awt.image.RenderedImage;
diff --git a/src/de/lmu/ifi/dbs/elki/gui/configurator/AbstractParameterConfigurator.java b/src/de/lmu/ifi/dbs/elki/gui/configurator/AbstractParameterConfigurator.java
index 7fbc0049..316ecc26 100644
--- a/src/de/lmu/ifi/dbs/elki/gui/configurator/AbstractParameterConfigurator.java
+++ b/src/de/lmu/ifi/dbs/elki/gui/configurator/AbstractParameterConfigurator.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.gui.configurator;
-/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.awt.Dimension;
import java.awt.GridBagConstraints;
@@ -108,7 +109,7 @@ public abstract class AbstractParameterConfigurator<T extends Parameter<?, ?>> i
}
@Override
- public void addParameter(@SuppressWarnings("unused") Object owner, @SuppressWarnings("unused") Parameter<?, ?> param, @SuppressWarnings("unused") TrackParameters track) {
+ public void addParameter(Object owner, Parameter<?, ?> param, TrackParameters track) {
LoggingUtil.warning(this.getClass() + " does not support sub-parameters!");
}
diff --git a/src/de/lmu/ifi/dbs/elki/gui/configurator/AbstractSingleParameterConfigurator.java b/src/de/lmu/ifi/dbs/elki/gui/configurator/AbstractSingleParameterConfigurator.java
index fa2146de..dc5166c5 100644
--- a/src/de/lmu/ifi/dbs/elki/gui/configurator/AbstractSingleParameterConfigurator.java
+++ b/src/de/lmu/ifi/dbs/elki/gui/configurator/AbstractSingleParameterConfigurator.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.gui.configurator;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.awt.GridBagConstraints;
diff --git a/src/de/lmu/ifi/dbs/elki/gui/configurator/ClassListParameterConfigurator.java b/src/de/lmu/ifi/dbs/elki/gui/configurator/ClassListParameterConfigurator.java
index c40cad99..e75a6f93 100644
--- a/src/de/lmu/ifi/dbs/elki/gui/configurator/ClassListParameterConfigurator.java
+++ b/src/de/lmu/ifi/dbs/elki/gui/configurator/ClassListParameterConfigurator.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.gui.configurator;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.awt.BorderLayout;
import java.awt.Dimension;
diff --git a/src/de/lmu/ifi/dbs/elki/gui/configurator/ClassParameterConfigurator.java b/src/de/lmu/ifi/dbs/elki/gui/configurator/ClassParameterConfigurator.java
index 656cd380..98e52444 100644
--- a/src/de/lmu/ifi/dbs/elki/gui/configurator/ClassParameterConfigurator.java
+++ b/src/de/lmu/ifi/dbs/elki/gui/configurator/ClassParameterConfigurator.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.gui.configurator;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.awt.GridBagConstraints;
import java.awt.Insets;
diff --git a/src/de/lmu/ifi/dbs/elki/gui/configurator/ConfiguratorPanel.java b/src/de/lmu/ifi/dbs/elki/gui/configurator/ConfiguratorPanel.java
index 30016a8f..a4cf6977 100644
--- a/src/de/lmu/ifi/dbs/elki/gui/configurator/ConfiguratorPanel.java
+++ b/src/de/lmu/ifi/dbs/elki/gui/configurator/ConfiguratorPanel.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.gui.configurator;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.awt.GridBagLayout;
import java.util.HashMap;
diff --git a/src/de/lmu/ifi/dbs/elki/gui/configurator/FileParameterConfigurator.java b/src/de/lmu/ifi/dbs/elki/gui/configurator/FileParameterConfigurator.java
index e27d8155..add20f69 100644
--- a/src/de/lmu/ifi/dbs/elki/gui/configurator/FileParameterConfigurator.java
+++ b/src/de/lmu/ifi/dbs/elki/gui/configurator/FileParameterConfigurator.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.gui.configurator;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.awt.BorderLayout;
import java.awt.GridBagConstraints;
diff --git a/src/de/lmu/ifi/dbs/elki/gui/configurator/FlagParameterConfigurator.java b/src/de/lmu/ifi/dbs/elki/gui/configurator/FlagParameterConfigurator.java
index 01b2cb62..49fc0a13 100644
--- a/src/de/lmu/ifi/dbs/elki/gui/configurator/FlagParameterConfigurator.java
+++ b/src/de/lmu/ifi/dbs/elki/gui/configurator/FlagParameterConfigurator.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.gui.configurator;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.awt.GridBagConstraints;
import java.awt.event.ActionEvent;
diff --git a/src/de/lmu/ifi/dbs/elki/gui/configurator/ParameterConfigurator.java b/src/de/lmu/ifi/dbs/elki/gui/configurator/ParameterConfigurator.java
index 020ba2c2..174240b0 100644
--- a/src/de/lmu/ifi/dbs/elki/gui/configurator/ParameterConfigurator.java
+++ b/src/de/lmu/ifi/dbs/elki/gui/configurator/ParameterConfigurator.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.gui.configurator;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import javax.swing.event.ChangeListener;
diff --git a/src/de/lmu/ifi/dbs/elki/gui/configurator/TextParameterConfigurator.java b/src/de/lmu/ifi/dbs/elki/gui/configurator/TextParameterConfigurator.java
index 4662484a..5a9848aa 100644
--- a/src/de/lmu/ifi/dbs/elki/gui/configurator/TextParameterConfigurator.java
+++ b/src/de/lmu/ifi/dbs/elki/gui/configurator/TextParameterConfigurator.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.gui.configurator;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.awt.Dimension;
import java.awt.GridBagConstraints;
diff --git a/src/de/lmu/ifi/dbs/elki/gui/icons/StockIcon.java b/src/de/lmu/ifi/dbs/elki/gui/icons/StockIcon.java
index fe0b7b0c..a21122aa 100644
--- a/src/de/lmu/ifi/dbs/elki/gui/icons/StockIcon.java
+++ b/src/de/lmu/ifi/dbs/elki/gui/icons/StockIcon.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.gui.icons;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.lang.ref.SoftReference;
import java.util.HashMap;
diff --git a/src/de/lmu/ifi/dbs/elki/gui/minigui/MiniGUI.java b/src/de/lmu/ifi/dbs/elki/gui/minigui/MiniGUI.java
index ba050d5f..5e5c8caa 100644
--- a/src/de/lmu/ifi/dbs/elki/gui/minigui/MiniGUI.java
+++ b/src/de/lmu/ifi/dbs/elki/gui/minigui/MiniGUI.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.gui.minigui;
-/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.awt.Dimension;
import java.awt.GridBagConstraints;
@@ -154,7 +155,7 @@ public class MiniGUI extends JPanel {
loadButton.setMnemonic(KeyEvent.VK_L);
loadButton.addActionListener(new ActionListener() {
@Override
- public void actionPerformed(@SuppressWarnings("unused") ActionEvent e) {
+ public void actionPerformed(ActionEvent e) {
String key = savedSettingsModel.getSelectedItem();
ArrayList<String> settings = store.get(key);
if(settings != null) {
@@ -170,7 +171,7 @@ public class MiniGUI extends JPanel {
saveButton.setMnemonic(KeyEvent.VK_S);
saveButton.addActionListener(new ActionListener() {
@Override
- public void actionPerformed(@SuppressWarnings("unused") ActionEvent e) {
+ public void actionPerformed(ActionEvent e) {
String key = savedSettingsModel.getSelectedItem();
// Stop editing the table.
parameterTable.editCellAt(-1, -1);
@@ -190,7 +191,7 @@ public class MiniGUI extends JPanel {
removeButton.setMnemonic(KeyEvent.VK_E);
removeButton.addActionListener(new ActionListener() {
@Override
- public void actionPerformed(@SuppressWarnings("unused") ActionEvent e) {
+ public void actionPerformed(ActionEvent e) {
String key = savedSettingsModel.getSelectedItem();
store.remove(key);
try {
@@ -210,7 +211,7 @@ public class MiniGUI extends JPanel {
runButton.setMnemonic(KeyEvent.VK_R);
runButton.addActionListener(new ActionListener() {
@Override
- public void actionPerformed(@SuppressWarnings("unused") ActionEvent e) {
+ public void actionPerformed(ActionEvent e) {
startTask();
}
});
@@ -231,7 +232,7 @@ public class MiniGUI extends JPanel {
ParametersModel parameterModel = new ParametersModel(parameters);
parameterModel.addTableModelListener(new TableModelListener() {
@Override
- public void tableChanged(@SuppressWarnings("unused") TableModelEvent e) {
+ public void tableChanged(TableModelEvent e) {
// logger.debug("Change event.");
updateParameterTable();
}
diff --git a/src/de/lmu/ifi/dbs/elki/gui/multistep/MultiStepGUI.java b/src/de/lmu/ifi/dbs/elki/gui/multistep/MultiStepGUI.java
index cf7f2a3c..ae550837 100644
--- a/src/de/lmu/ifi/dbs/elki/gui/multistep/MultiStepGUI.java
+++ b/src/de/lmu/ifi/dbs/elki/gui/multistep/MultiStepGUI.java
@@ -1,33 +1,35 @@
package de.lmu.ifi.dbs.elki.gui.multistep;
-/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.awt.Dimension;
import java.awt.GridBagConstraints;
import java.awt.GridBagLayout;
+import java.io.FileNotFoundException;
+import java.io.IOException;
+import java.util.ArrayList;
-import javax.swing.AbstractListModel;
-import javax.swing.ComboBoxModel;
import javax.swing.ImageIcon;
import javax.swing.JFrame;
import javax.swing.JPanel;
@@ -36,15 +38,18 @@ import javax.swing.JTabbedPane;
import javax.swing.UIManager;
import de.lmu.ifi.dbs.elki.KDDTask;
+import de.lmu.ifi.dbs.elki.gui.minigui.MiniGUI;
import de.lmu.ifi.dbs.elki.gui.multistep.panels.AlgorithmTabPanel;
import de.lmu.ifi.dbs.elki.gui.multistep.panels.EvaluationTabPanel;
import de.lmu.ifi.dbs.elki.gui.multistep.panels.InputTabPanel;
import de.lmu.ifi.dbs.elki.gui.multistep.panels.LoggingTabPanel;
import de.lmu.ifi.dbs.elki.gui.multistep.panels.OutputTabPanel;
+import de.lmu.ifi.dbs.elki.gui.multistep.panels.SavedSettingsTabPanel;
import de.lmu.ifi.dbs.elki.gui.util.LogPanel;
import de.lmu.ifi.dbs.elki.gui.util.SavedSettingsFile;
import de.lmu.ifi.dbs.elki.logging.Logging;
import de.lmu.ifi.dbs.elki.utilities.optionhandling.parameterization.ListParameterization;
+import de.lmu.ifi.dbs.elki.utilities.optionhandling.parameterization.Parameterization;
import de.lmu.ifi.dbs.elki.workflow.OutputStep;
/**
@@ -86,6 +91,8 @@ public class MultiStepGUI extends JPanel {
private LoggingTabPanel logTab;
+ private SavedSettingsTabPanel setTab;
+
/**
* Constructor
*/
@@ -130,33 +137,70 @@ public class MultiStepGUI extends JPanel {
}
private void addPanels(JTabbedPane panels) {
+ SavedSettingsFile settings = new SavedSettingsFile(MiniGUI.SAVED_SETTINGS_FILENAME);
+ try {
+ settings.load();
+ }
+ catch(FileNotFoundException e) {
+ logger.warning("Error loading saved settings.");
+ }
+ catch(IOException e) {
+ // TODO Auto-generated catch block
+ e.printStackTrace();
+ }
+
inputTab = new InputTabPanel();
algTab = new AlgorithmTabPanel(inputTab);
evalTab = new EvaluationTabPanel(inputTab, algTab);
outTab = new OutputTabPanel(inputTab, evalTab);
logTab = new LoggingTabPanel();
+ setTab = new SavedSettingsTabPanel(settings, this);
panels.addTab("Input", inputTab);
panels.addTab("Algorithm", algTab);
panels.addTab("Evaluation", evalTab);
panels.addTab("Output", outTab);
panels.addTab("Logging", logTab);
+ panels.addTab("Saved Settings", setTab);
- ListParameterization config = new ListParameterization();
+ setParameters(new ListParameterization());
+ }
+
+ /**
+ * Set the parameters.
+ *
+ * @param config Parameterization
+ */
+ public void setParameters(Parameterization config) {
// Clear errors after each step, so they don't consider themselves failed
// because of earlier errors.
logTab.setParameters(config);
- config.clearErrors();
+ //config.clearErrors();
inputTab.setParameters(config);
- config.clearErrors();
+ //config.clearErrors();
algTab.setParameters(config);
- config.clearErrors();
+ //config.clearErrors();
evalTab.setParameters(config);
- config.clearErrors();
+ //config.clearErrors();
outTab.setParameters(config);
- config.clearErrors();
+ //config.clearErrors();
}
/**
+ * Get the serialized parameters
+ *
+ * @return Serialized parameters
+ */
+ public ArrayList<String> serializeParameters() {
+ ListParameterization params = new ListParameterization();
+ logTab.appendParameters(params);
+ inputTab.appendParameters(params);
+ algTab.appendParameters(params);
+ evalTab.appendParameters(params);
+ outTab.appendParameters(params);
+ return params.serialize();
+ }
+
+ /**
* Create the GUI and show it. For thread safety, this method should be
* invoked from the event-dispatching thread.
*/
@@ -201,67 +245,4 @@ public class MultiStepGUI extends JPanel {
}
});
}
-
- /**
- * Class to interface between the saved settings list and a JComboBox
- *
- * @author Erich Schubert
- *
- * @apiviz.composedOf de.lmu.ifi.dbs.elki.gui.util.SavedSettingsFile
- */
- class SettingsComboboxModel extends AbstractListModel implements ComboBoxModel {
- /**
- * Serial version
- */
- private static final long serialVersionUID = 1L;
-
- /**
- * Settings storage
- */
- protected SavedSettingsFile store;
-
- /**
- * Selected entry
- */
- protected String selected = null;
-
- /**
- * Constructor
- *
- * @param store Store to access
- */
- public SettingsComboboxModel(SavedSettingsFile store) {
- super();
- this.store = store;
- }
-
- @Override
- public String getSelectedItem() {
- return selected;
- }
-
- @Override
- public void setSelectedItem(Object anItem) {
- if(anItem instanceof String) {
- selected = (String) anItem;
- }
- }
-
- @Override
- public Object getElementAt(int index) {
- return store.getElementAt(index).first;
- }
-
- @Override
- public int getSize() {
- return store.size();
- }
-
- /**
- * Force an update
- */
- public void update() {
- fireContentsChanged(this, 0, getSize() + 1);
- }
- }
} \ No newline at end of file
diff --git a/src/de/lmu/ifi/dbs/elki/gui/multistep/panels/AlgorithmTabPanel.java b/src/de/lmu/ifi/dbs/elki/gui/multistep/panels/AlgorithmTabPanel.java
index 3dde0889..4f294468 100644
--- a/src/de/lmu/ifi/dbs/elki/gui/multistep/panels/AlgorithmTabPanel.java
+++ b/src/de/lmu/ifi/dbs/elki/gui/multistep/panels/AlgorithmTabPanel.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.gui.multistep.panels;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.lang.ref.WeakReference;
diff --git a/src/de/lmu/ifi/dbs/elki/gui/multistep/panels/EvaluationTabPanel.java b/src/de/lmu/ifi/dbs/elki/gui/multistep/panels/EvaluationTabPanel.java
index 0f7a6776..4f6d0879 100644
--- a/src/de/lmu/ifi/dbs/elki/gui/multistep/panels/EvaluationTabPanel.java
+++ b/src/de/lmu/ifi/dbs/elki/gui/multistep/panels/EvaluationTabPanel.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.gui.multistep.panels;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.lang.ref.WeakReference;
diff --git a/src/de/lmu/ifi/dbs/elki/gui/multistep/panels/InputTabPanel.java b/src/de/lmu/ifi/dbs/elki/gui/multistep/panels/InputTabPanel.java
index 86d7a013..833d5ba8 100644
--- a/src/de/lmu/ifi/dbs/elki/gui/multistep/panels/InputTabPanel.java
+++ b/src/de/lmu/ifi/dbs/elki/gui/multistep/panels/InputTabPanel.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.gui.multistep.panels;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.utilities.exceptions.AbortException;
import de.lmu.ifi.dbs.elki.utilities.optionhandling.parameterization.Parameterization;
diff --git a/src/de/lmu/ifi/dbs/elki/gui/multistep/panels/LoggingTabPanel.java b/src/de/lmu/ifi/dbs/elki/gui/multistep/panels/LoggingTabPanel.java
index 1ab722f0..143887fc 100644
--- a/src/de/lmu/ifi/dbs/elki/gui/multistep/panels/LoggingTabPanel.java
+++ b/src/de/lmu/ifi/dbs/elki/gui/multistep/panels/LoggingTabPanel.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.gui.multistep.panels;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.logging.LoggingConfiguration;
import de.lmu.ifi.dbs.elki.logging.LoggingUtil;
diff --git a/src/de/lmu/ifi/dbs/elki/gui/multistep/panels/OutputTabPanel.java b/src/de/lmu/ifi/dbs/elki/gui/multistep/panels/OutputTabPanel.java
index 7e599a62..acbde125 100644
--- a/src/de/lmu/ifi/dbs/elki/gui/multistep/panels/OutputTabPanel.java
+++ b/src/de/lmu/ifi/dbs/elki/gui/multistep/panels/OutputTabPanel.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.gui.multistep.panels;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.lang.ref.WeakReference;
diff --git a/src/de/lmu/ifi/dbs/elki/gui/multistep/panels/ParameterTabPanel.java b/src/de/lmu/ifi/dbs/elki/gui/multistep/panels/ParameterTabPanel.java
index 175b9100..1bfe0000 100644
--- a/src/de/lmu/ifi/dbs/elki/gui/multistep/panels/ParameterTabPanel.java
+++ b/src/de/lmu/ifi/dbs/elki/gui/multistep/panels/ParameterTabPanel.java
@@ -1,34 +1,33 @@
package de.lmu.ifi.dbs.elki.gui.multistep.panels;
-/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.awt.GridBagConstraints;
import java.awt.GridBagLayout;
import java.awt.event.ActionEvent;
import java.awt.event.ActionListener;
import java.awt.event.KeyEvent;
-import java.util.BitSet;
-import java.util.List;
import javax.swing.BoxLayout;
import javax.swing.JButton;
@@ -39,13 +38,11 @@ import javax.swing.event.ChangeEvent;
import javax.swing.event.ChangeListener;
import de.lmu.ifi.dbs.elki.gui.configurator.ConfiguratorPanel;
-import de.lmu.ifi.dbs.elki.gui.util.DynamicParameters;
import de.lmu.ifi.dbs.elki.logging.Logging;
import de.lmu.ifi.dbs.elki.utilities.FormatUtil;
import de.lmu.ifi.dbs.elki.utilities.designpattern.Observable;
import de.lmu.ifi.dbs.elki.utilities.designpattern.Observer;
import de.lmu.ifi.dbs.elki.utilities.designpattern.Observers;
-import de.lmu.ifi.dbs.elki.utilities.optionhandling.OptionID;
import de.lmu.ifi.dbs.elki.utilities.optionhandling.ParameterException;
import de.lmu.ifi.dbs.elki.utilities.optionhandling.UnspecifiedParameterException;
import de.lmu.ifi.dbs.elki.utilities.optionhandling.parameterization.ListParameterization;
@@ -131,7 +128,7 @@ public abstract class ParameterTabPanel extends JPanel implements Observable<Par
runButton.setMnemonic(KeyEvent.VK_R);
runButton.addActionListener(new ActionListener() {
@Override
- public void actionPerformed(@SuppressWarnings("unused") ActionEvent e) {
+ public void actionPerformed(ActionEvent e) {
Thread r = new Thread() {
@Override
public void run() {
@@ -183,6 +180,9 @@ public abstract class ParameterTabPanel extends JPanel implements Observable<Par
ListParameterization config = new ListParameterization();
parameterTable.appendParameters(config);
setParameters(config);
+ if(config.getErrors().size() > 0) {
+ reportErrors(config);
+ }
config.clearErrors();
parameterTable.setEnabled(true);
}
@@ -192,14 +192,9 @@ public abstract class ParameterTabPanel extends JPanel implements Observable<Par
*
* @param config Parameterization
*/
- public void setParameters(ListParameterization config) {
+ public void setParameters(Parameterization config) {
TrackParameters track = new TrackParameters(config);
configureStep(track);
- //config.logUnusedParameters();
- if(config.getErrors().size() > 0) {
- reportErrors(config);
- }
- List<Pair<OptionID, Object>> remainingParameters = config.getRemainingParameters();
// update parameter table
{
@@ -210,21 +205,6 @@ public abstract class ParameterTabPanel extends JPanel implements Observable<Par
parameterTable.addParameter(pair.first, pair.getSecond(), track);
}
//parameters.updateFromTrackParameters(track);
- // Add remaining parameters
- if(remainingParameters != null && !remainingParameters.isEmpty()) {
- DynamicParameters.RemainingOptions remo = new DynamicParameters.RemainingOptions();
- try {
- remo.setValue("FIXME"); //FormatUtil.format(remainingParameters, " "));
- }
- catch(ParameterException e) {
- logger.exception(e);
- }
- BitSet bits = new BitSet();
- bits.set(DynamicParameters.BIT_INVALID);
- bits.set(DynamicParameters.BIT_SYNTAX_ERROR);
- //parameters.addParameter(remo, remo.getValue(), bits, 0);
- parameterTable.addParameter(null, remo, track);
- }
parameterTable.revalidate();
parameterTable.setEnabled(true);
@@ -234,6 +214,15 @@ public abstract class ParameterTabPanel extends JPanel implements Observable<Par
updateStatus();
observers.notifyObservers(this);
}
+
+ /**
+ * Collect parameters
+ *
+ * @param params Parameter list to add to
+ */
+ public void appendParameters(ListParameterization params) {
+ parameterTable.appendParameters(params);
+ }
/**
* Report errors in a single error log record.
diff --git a/src/de/lmu/ifi/dbs/elki/gui/multistep/panels/SavedSettingsTabPanel.java b/src/de/lmu/ifi/dbs/elki/gui/multistep/panels/SavedSettingsTabPanel.java
new file mode 100644
index 00000000..147943eb
--- /dev/null
+++ b/src/de/lmu/ifi/dbs/elki/gui/multistep/panels/SavedSettingsTabPanel.java
@@ -0,0 +1,238 @@
+package de.lmu.ifi.dbs.elki.gui.multistep.panels;
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
+
+import java.awt.GridBagConstraints;
+import java.awt.GridBagLayout;
+import java.awt.event.ActionEvent;
+import java.awt.event.ActionListener;
+import java.awt.event.KeyEvent;
+import java.io.IOException;
+import java.util.ArrayList;
+
+import javax.swing.AbstractListModel;
+import javax.swing.BoxLayout;
+import javax.swing.ComboBoxModel;
+import javax.swing.JButton;
+import javax.swing.JComboBox;
+import javax.swing.JPanel;
+
+import de.lmu.ifi.dbs.elki.gui.multistep.MultiStepGUI;
+import de.lmu.ifi.dbs.elki.gui.util.SavedSettingsFile;
+import de.lmu.ifi.dbs.elki.logging.Logging;
+import de.lmu.ifi.dbs.elki.utilities.optionhandling.parameterization.SerializedParameterization;
+
+/**
+ * Tab panel to manage saved settings.
+ *
+ * @author Erich Schubert
+ */
+public class SavedSettingsTabPanel extends JPanel {
+ /**
+ * Serial version
+ */
+ private static final long serialVersionUID = 1L;
+
+ /**
+ * Logger
+ */
+ protected static final Logging logger = Logging.getLogger(SavedSettingsTabPanel.class);
+
+ /**
+ * The settings file to display.
+ */
+ SavedSettingsFile store;
+
+ /**
+ * Settings combo box.
+ */
+ SettingsComboboxModel savedSettingsModel;
+
+ /**
+ * The combo box to use
+ */
+ JComboBox savedCombo;
+
+ /**
+ * The UI to set parameters on.
+ *
+ * TODO: Use an Interface instead?
+ */
+ private MultiStepGUI gui;
+
+ /**
+ * Constructor.
+ *
+ * @param store2 Settings store.
+ * @param gui2 UI to use
+ */
+ public SavedSettingsTabPanel(SavedSettingsFile store2, MultiStepGUI gui2) {
+ super();
+ this.store = store2;
+ this.gui = gui2;
+ this.setLayout(new GridBagLayout());
+ // Dropdown for saved settings
+ {
+ savedSettingsModel = new SettingsComboboxModel(store);
+ savedCombo = new JComboBox(savedSettingsModel);
+ savedCombo.setEditable(true);
+ savedCombo.setSelectedItem("[Saved Settings]");
+ GridBagConstraints constraints = new GridBagConstraints();
+ constraints.fill = GridBagConstraints.HORIZONTAL;
+ constraints.gridx = 0;
+ constraints.gridy = 0;
+ constraints.weightx = 1.0;
+ constraints.weighty = 0.01;
+ add(savedCombo, constraints);
+ }
+ // Button panel
+ {
+ JPanel buttonPanel = new JPanel();
+ buttonPanel.setLayout(new BoxLayout(buttonPanel, BoxLayout.X_AXIS));
+
+ // button to load settings
+ JButton loadButton = new JButton("Load");
+ loadButton.setMnemonic(KeyEvent.VK_L);
+ loadButton.addActionListener(new ActionListener() {
+ @Override
+ public void actionPerformed(ActionEvent e) {
+ String key = savedSettingsModel.getSelectedItem();
+ ArrayList<String> settings = store.get(key);
+ SerializedParameterization config = new SerializedParameterization(settings);
+ gui.setParameters(config);
+ config.logUnusedParameters();
+ config.clearErrors();
+ }
+ });
+ buttonPanel.add(loadButton);
+ // button to save settings
+ JButton saveButton = new JButton("Save");
+ saveButton.setMnemonic(KeyEvent.VK_S);
+ saveButton.addActionListener(new ActionListener() {
+ @Override
+ public void actionPerformed(ActionEvent e) {
+ String key = savedSettingsModel.getSelectedItem();
+ store.put(key, gui.serializeParameters());
+ try {
+ store.save();
+ }
+ catch(IOException e1) {
+ logger.exception(e1);
+ }
+ savedSettingsModel.update();
+ }
+ });
+ buttonPanel.add(saveButton);
+ // button to remove saved settings
+ JButton removeButton = new JButton("Remove");
+ removeButton.setMnemonic(KeyEvent.VK_E);
+ removeButton.addActionListener(new ActionListener() {
+ @Override
+ public void actionPerformed(ActionEvent e) {
+ String key = savedSettingsModel.getSelectedItem();
+ store.remove(key);
+ try {
+ store.save();
+ }
+ catch(IOException e1) {
+ logger.exception(e1);
+ }
+ savedCombo.setSelectedItem("[Saved Settings]");
+ savedSettingsModel.update();
+ }
+ });
+ buttonPanel.add(removeButton);
+
+ GridBagConstraints constraints = new GridBagConstraints();
+ constraints.fill = GridBagConstraints.HORIZONTAL;
+ constraints.gridx = 0;
+ constraints.gridy = 1;
+ constraints.weightx = 1.0;
+ constraints.weighty = 0.01;
+ add(buttonPanel, constraints);
+ }
+ }
+
+ /**
+ * Class to interface between the saved settings list and a JComboBox
+ *
+ * @author Erich Schubert
+ *
+ * @apiviz.composedOf de.lmu.ifi.dbs.elki.gui.util.SavedSettingsFile
+ */
+ class SettingsComboboxModel extends AbstractListModel implements ComboBoxModel {
+ /**
+ * Serial version
+ */
+ private static final long serialVersionUID = 1L;
+
+ /**
+ * Settings storage
+ */
+ protected SavedSettingsFile store;
+
+ /**
+ * Selected entry
+ */
+ protected String selected = null;
+
+ /**
+ * Constructor
+ *
+ * @param store Store to access
+ */
+ public SettingsComboboxModel(SavedSettingsFile store) {
+ super();
+ this.store = store;
+ }
+
+ @Override
+ public String getSelectedItem() {
+ return selected;
+ }
+
+ @Override
+ public void setSelectedItem(Object anItem) {
+ if(anItem instanceof String) {
+ selected = (String) anItem;
+ }
+ }
+
+ @Override
+ public Object getElementAt(int index) {
+ return store.getElementAt(index).first;
+ }
+
+ @Override
+ public int getSize() {
+ return store.size();
+ }
+
+ /**
+ * Force an update
+ */
+ public void update() {
+ fireContentsChanged(this, 0, getSize() + 1);
+ }
+ }
+} \ No newline at end of file
diff --git a/src/de/lmu/ifi/dbs/elki/gui/util/DynamicParameters.java b/src/de/lmu/ifi/dbs/elki/gui/util/DynamicParameters.java
index 0eb76d64..c2860d6a 100644
--- a/src/de/lmu/ifi/dbs/elki/gui/util/DynamicParameters.java
+++ b/src/de/lmu/ifi/dbs/elki/gui/util/DynamicParameters.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.gui.util;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.ArrayList;
import java.util.BitSet;
diff --git a/src/de/lmu/ifi/dbs/elki/gui/util/LogPane.java b/src/de/lmu/ifi/dbs/elki/gui/util/LogPane.java
index 058ac207..50d4e784 100644
--- a/src/de/lmu/ifi/dbs/elki/gui/util/LogPane.java
+++ b/src/de/lmu/ifi/dbs/elki/gui/util/LogPane.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.gui.util;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.awt.Color;
import java.util.logging.ErrorManager;
diff --git a/src/de/lmu/ifi/dbs/elki/gui/util/LogPanel.java b/src/de/lmu/ifi/dbs/elki/gui/util/LogPanel.java
index 1f3d951d..99c28dee 100644
--- a/src/de/lmu/ifi/dbs/elki/gui/util/LogPanel.java
+++ b/src/de/lmu/ifi/dbs/elki/gui/util/LogPanel.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.gui.util;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.awt.Dimension;
import java.util.HashMap;
diff --git a/src/de/lmu/ifi/dbs/elki/gui/util/ParameterTable.java b/src/de/lmu/ifi/dbs/elki/gui/util/ParameterTable.java
index 212693f6..ea41213a 100644
--- a/src/de/lmu/ifi/dbs/elki/gui/util/ParameterTable.java
+++ b/src/de/lmu/ifi/dbs/elki/gui/util/ParameterTable.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.gui.util;
-/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.awt.BorderLayout;
import java.awt.Color;
@@ -305,7 +306,7 @@ public class ParameterTable extends JTable {
* Button callback to show the file selector
*/
@Override
- public void actionPerformed(@SuppressWarnings("unused") ActionEvent e) {
+ public void actionPerformed(ActionEvent e) {
int returnVal = fc.showOpenDialog(button);
if(returnVal == JFileChooser.APPROVE_OPTION) {
@@ -329,7 +330,7 @@ public class ParameterTable extends JTable {
* Apply the Editor for a selected option.
*/
@Override
- public Component getTableCellEditorComponent(@SuppressWarnings("unused") JTable table, @SuppressWarnings("unused") Object value, @SuppressWarnings("unused") boolean isSelected, int row, @SuppressWarnings("unused") int column) {
+ public Component getTableCellEditorComponent(JTable table, Object value, boolean isSelected, int row, int column) {
if(row < parameters.size()) {
Parameter<?, ?> option = parameters.getNode(row).param;
if(option instanceof FileParameter) {
@@ -500,7 +501,7 @@ public class ParameterTable extends JTable {
* Apply the Editor for a selected option.
*/
@Override
- public Component getTableCellEditorComponent(@SuppressWarnings("unused") JTable table, @SuppressWarnings("unused") Object value, @SuppressWarnings("unused") boolean isSelected, int row, @SuppressWarnings("unused") int column) {
+ public Component getTableCellEditorComponent(JTable table, Object value, boolean isSelected, int row, int column) {
combo.removeAllItems();
if(row < parameters.size()) {
Parameter<?, ?> option = parameters.getNode(row).param;
diff --git a/src/de/lmu/ifi/dbs/elki/gui/util/ParametersModel.java b/src/de/lmu/ifi/dbs/elki/gui/util/ParametersModel.java
index 2fb9fb90..454ed486 100644
--- a/src/de/lmu/ifi/dbs/elki/gui/util/ParametersModel.java
+++ b/src/de/lmu/ifi/dbs/elki/gui/util/ParametersModel.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.gui.util;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import javax.swing.table.AbstractTableModel;
diff --git a/src/de/lmu/ifi/dbs/elki/gui/util/SavedSettingsFile.java b/src/de/lmu/ifi/dbs/elki/gui/util/SavedSettingsFile.java
index 70cecd00..9e74b695 100644
--- a/src/de/lmu/ifi/dbs/elki/gui/util/SavedSettingsFile.java
+++ b/src/de/lmu/ifi/dbs/elki/gui/util/SavedSettingsFile.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.gui.util;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.io.BufferedReader;
import java.io.File;
diff --git a/src/de/lmu/ifi/dbs/elki/index/AbstractIndex.java b/src/de/lmu/ifi/dbs/elki/index/AbstractIndex.java
index 84189db7..061d7893 100644
--- a/src/de/lmu/ifi/dbs/elki/index/AbstractIndex.java
+++ b/src/de/lmu/ifi/dbs/elki/index/AbstractIndex.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.index;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.database.ids.DBID;
import de.lmu.ifi.dbs.elki.database.ids.DBIDs;
@@ -63,25 +64,21 @@ public abstract class AbstractIndex<O> implements Index {
return null;
}
- @SuppressWarnings("unused")
@Override
public void insert(DBID id) {
throw new UnsupportedOperationException("This index does not allow dynamic updates.");
}
- @SuppressWarnings("unused")
@Override
public void insertAll(DBIDs ids) {
throw new UnsupportedOperationException("This index does not allow dynamic updates.");
}
- @SuppressWarnings("unused")
@Override
public boolean delete(DBID id) {
throw new UnsupportedOperationException("This index does not allow dynamic updates.");
}
- @SuppressWarnings("unused")
@Override
public void deleteAll(DBIDs id) {
throw new UnsupportedOperationException("This index does not allow dynamic updates.");
diff --git a/src/de/lmu/ifi/dbs/elki/index/Index.java b/src/de/lmu/ifi/dbs/elki/index/Index.java
index 35b3a18d..2021fbbb 100644
--- a/src/de/lmu/ifi/dbs/elki/index/Index.java
+++ b/src/de/lmu/ifi/dbs/elki/index/Index.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.index;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.database.ids.DBID;
import de.lmu.ifi.dbs.elki.database.ids.DBIDs;
diff --git a/src/de/lmu/ifi/dbs/elki/index/IndexFactory.java b/src/de/lmu/ifi/dbs/elki/index/IndexFactory.java
index 38b1b060..c09f579b 100644
--- a/src/de/lmu/ifi/dbs/elki/index/IndexFactory.java
+++ b/src/de/lmu/ifi/dbs/elki/index/IndexFactory.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.index;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.data.type.TypeInformation;
import de.lmu.ifi.dbs.elki.database.relation.Relation;
diff --git a/src/de/lmu/ifi/dbs/elki/index/KNNIndex.java b/src/de/lmu/ifi/dbs/elki/index/KNNIndex.java
index c03949c4..7fcb7376 100644
--- a/src/de/lmu/ifi/dbs/elki/index/KNNIndex.java
+++ b/src/de/lmu/ifi/dbs/elki/index/KNNIndex.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.index;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.database.query.distance.DistanceQuery;
import de.lmu.ifi.dbs.elki.database.query.knn.KNNQuery;
diff --git a/src/de/lmu/ifi/dbs/elki/index/RKNNIndex.java b/src/de/lmu/ifi/dbs/elki/index/RKNNIndex.java
index a2f97358..f29fbe89 100644
--- a/src/de/lmu/ifi/dbs/elki/index/RKNNIndex.java
+++ b/src/de/lmu/ifi/dbs/elki/index/RKNNIndex.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.index;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.database.query.distance.DistanceQuery;
import de.lmu.ifi.dbs.elki.database.query.rknn.RKNNQuery;
diff --git a/src/de/lmu/ifi/dbs/elki/index/RangeIndex.java b/src/de/lmu/ifi/dbs/elki/index/RangeIndex.java
index 952d847a..1bcfad12 100644
--- a/src/de/lmu/ifi/dbs/elki/index/RangeIndex.java
+++ b/src/de/lmu/ifi/dbs/elki/index/RangeIndex.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.index;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.database.query.distance.DistanceQuery;
import de.lmu.ifi.dbs.elki.database.query.range.RangeQuery;
diff --git a/src/de/lmu/ifi/dbs/elki/index/preprocessed/AbstractPreprocessorIndex.java b/src/de/lmu/ifi/dbs/elki/index/preprocessed/AbstractPreprocessorIndex.java
index d47a5527..6ae84286 100644
--- a/src/de/lmu/ifi/dbs/elki/index/preprocessed/AbstractPreprocessorIndex.java
+++ b/src/de/lmu/ifi/dbs/elki/index/preprocessed/AbstractPreprocessorIndex.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.index.preprocessed;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.database.datastore.WritableDataStore;
import de.lmu.ifi.dbs.elki.database.relation.Relation;
diff --git a/src/de/lmu/ifi/dbs/elki/index/preprocessed/LocalProjectionIndex.java b/src/de/lmu/ifi/dbs/elki/index/preprocessed/LocalProjectionIndex.java
index e7635ab3..9bcbe9ce 100644
--- a/src/de/lmu/ifi/dbs/elki/index/preprocessed/LocalProjectionIndex.java
+++ b/src/de/lmu/ifi/dbs/elki/index/preprocessed/LocalProjectionIndex.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.index.preprocessed;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.data.NumberVector;
import de.lmu.ifi.dbs.elki.database.ids.DBID;
diff --git a/src/de/lmu/ifi/dbs/elki/index/preprocessed/knn/AbstractMaterializeKNNPreprocessor.java b/src/de/lmu/ifi/dbs/elki/index/preprocessed/knn/AbstractMaterializeKNNPreprocessor.java
index d80063f3..0579262b 100644
--- a/src/de/lmu/ifi/dbs/elki/index/preprocessed/knn/AbstractMaterializeKNNPreprocessor.java
+++ b/src/de/lmu/ifi/dbs/elki/index/preprocessed/knn/AbstractMaterializeKNNPreprocessor.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.index.preprocessed.knn;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.List;
diff --git a/src/de/lmu/ifi/dbs/elki/index/preprocessed/knn/KNNListener.java b/src/de/lmu/ifi/dbs/elki/index/preprocessed/knn/KNNListener.java
index 4bd9b066..c4456f83 100644
--- a/src/de/lmu/ifi/dbs/elki/index/preprocessed/knn/KNNListener.java
+++ b/src/de/lmu/ifi/dbs/elki/index/preprocessed/knn/KNNListener.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.index.preprocessed.knn;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.EventListener;
diff --git a/src/de/lmu/ifi/dbs/elki/index/preprocessed/knn/MaterializeKNNAndRKNNPreprocessor.java b/src/de/lmu/ifi/dbs/elki/index/preprocessed/knn/MaterializeKNNAndRKNNPreprocessor.java
index 2c55d882..9abd4a74 100644
--- a/src/de/lmu/ifi/dbs/elki/index/preprocessed/knn/MaterializeKNNAndRKNNPreprocessor.java
+++ b/src/de/lmu/ifi/dbs/elki/index/preprocessed/knn/MaterializeKNNAndRKNNPreprocessor.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.index.preprocessed.knn;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.ArrayList;
import java.util.Iterator;
diff --git a/src/de/lmu/ifi/dbs/elki/index/preprocessed/knn/MaterializeKNNPreprocessor.java b/src/de/lmu/ifi/dbs/elki/index/preprocessed/knn/MaterializeKNNPreprocessor.java
index dccdb48a..9d55e916 100644
--- a/src/de/lmu/ifi/dbs/elki/index/preprocessed/knn/MaterializeKNNPreprocessor.java
+++ b/src/de/lmu/ifi/dbs/elki/index/preprocessed/knn/MaterializeKNNPreprocessor.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.index.preprocessed.knn;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.ArrayList;
import java.util.List;
diff --git a/src/de/lmu/ifi/dbs/elki/index/preprocessed/knn/MetricalIndexApproximationMaterializeKNNPreprocessor.java b/src/de/lmu/ifi/dbs/elki/index/preprocessed/knn/MetricalIndexApproximationMaterializeKNNPreprocessor.java
index a362b544..f20e6e39 100644
--- a/src/de/lmu/ifi/dbs/elki/index/preprocessed/knn/MetricalIndexApproximationMaterializeKNNPreprocessor.java
+++ b/src/de/lmu/ifi/dbs/elki/index/preprocessed/knn/MetricalIndexApproximationMaterializeKNNPreprocessor.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.index.preprocessed.knn;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.ArrayList;
import java.util.HashMap;
diff --git a/src/de/lmu/ifi/dbs/elki/index/preprocessed/knn/PartitionApproximationMaterializeKNNPreprocessor.java b/src/de/lmu/ifi/dbs/elki/index/preprocessed/knn/PartitionApproximationMaterializeKNNPreprocessor.java
index 757d04e8..3e7d1b8f 100644
--- a/src/de/lmu/ifi/dbs/elki/index/preprocessed/knn/PartitionApproximationMaterializeKNNPreprocessor.java
+++ b/src/de/lmu/ifi/dbs/elki/index/preprocessed/knn/PartitionApproximationMaterializeKNNPreprocessor.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.index.preprocessed.knn;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.HashMap;
import java.util.List;
diff --git a/src/de/lmu/ifi/dbs/elki/index/preprocessed/knn/SpatialApproximationMaterializeKNNPreprocessor.java b/src/de/lmu/ifi/dbs/elki/index/preprocessed/knn/SpatialApproximationMaterializeKNNPreprocessor.java
index 2306d17e..320a3636 100644
--- a/src/de/lmu/ifi/dbs/elki/index/preprocessed/knn/SpatialApproximationMaterializeKNNPreprocessor.java
+++ b/src/de/lmu/ifi/dbs/elki/index/preprocessed/knn/SpatialApproximationMaterializeKNNPreprocessor.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.index.preprocessed.knn;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.Collection;
import java.util.HashMap;
diff --git a/src/de/lmu/ifi/dbs/elki/index/preprocessed/localpca/AbstractFilteredPCAIndex.java b/src/de/lmu/ifi/dbs/elki/index/preprocessed/localpca/AbstractFilteredPCAIndex.java
index 60f0f612..3def22a1 100644
--- a/src/de/lmu/ifi/dbs/elki/index/preprocessed/localpca/AbstractFilteredPCAIndex.java
+++ b/src/de/lmu/ifi/dbs/elki/index/preprocessed/localpca/AbstractFilteredPCAIndex.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.index.preprocessed.localpca;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.List;
diff --git a/src/de/lmu/ifi/dbs/elki/index/preprocessed/localpca/FilteredLocalPCAIndex.java b/src/de/lmu/ifi/dbs/elki/index/preprocessed/localpca/FilteredLocalPCAIndex.java
index 9aae4b2a..18835caa 100644
--- a/src/de/lmu/ifi/dbs/elki/index/preprocessed/localpca/FilteredLocalPCAIndex.java
+++ b/src/de/lmu/ifi/dbs/elki/index/preprocessed/localpca/FilteredLocalPCAIndex.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.index.preprocessed.localpca;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.data.NumberVector;
import de.lmu.ifi.dbs.elki.database.ids.DBID;
diff --git a/src/de/lmu/ifi/dbs/elki/index/preprocessed/localpca/KNNQueryFilteredPCAIndex.java b/src/de/lmu/ifi/dbs/elki/index/preprocessed/localpca/KNNQueryFilteredPCAIndex.java
index c3b6ea02..7565ab32 100644
--- a/src/de/lmu/ifi/dbs/elki/index/preprocessed/localpca/KNNQueryFilteredPCAIndex.java
+++ b/src/de/lmu/ifi/dbs/elki/index/preprocessed/localpca/KNNQueryFilteredPCAIndex.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.index.preprocessed.localpca;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.List;
diff --git a/src/de/lmu/ifi/dbs/elki/index/preprocessed/localpca/RangeQueryFilteredPCAIndex.java b/src/de/lmu/ifi/dbs/elki/index/preprocessed/localpca/RangeQueryFilteredPCAIndex.java
index d0cb4015..26f08ae3 100644
--- a/src/de/lmu/ifi/dbs/elki/index/preprocessed/localpca/RangeQueryFilteredPCAIndex.java
+++ b/src/de/lmu/ifi/dbs/elki/index/preprocessed/localpca/RangeQueryFilteredPCAIndex.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.index.preprocessed.localpca;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.List;
diff --git a/src/de/lmu/ifi/dbs/elki/index/preprocessed/preference/AbstractPreferenceVectorIndex.java b/src/de/lmu/ifi/dbs/elki/index/preprocessed/preference/AbstractPreferenceVectorIndex.java
index c2319619..13b6e28b 100644
--- a/src/de/lmu/ifi/dbs/elki/index/preprocessed/preference/AbstractPreferenceVectorIndex.java
+++ b/src/de/lmu/ifi/dbs/elki/index/preprocessed/preference/AbstractPreferenceVectorIndex.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.index.preprocessed.preference;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.BitSet;
diff --git a/src/de/lmu/ifi/dbs/elki/index/preprocessed/preference/DiSHPreferenceVectorIndex.java b/src/de/lmu/ifi/dbs/elki/index/preprocessed/preference/DiSHPreferenceVectorIndex.java
index 81b2858f..09ba95b3 100644
--- a/src/de/lmu/ifi/dbs/elki/index/preprocessed/preference/DiSHPreferenceVectorIndex.java
+++ b/src/de/lmu/ifi/dbs/elki/index/preprocessed/preference/DiSHPreferenceVectorIndex.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.index.preprocessed.preference;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.ArrayList;
import java.util.Arrays;
diff --git a/src/de/lmu/ifi/dbs/elki/index/preprocessed/preference/HiSCPreferenceVectorIndex.java b/src/de/lmu/ifi/dbs/elki/index/preprocessed/preference/HiSCPreferenceVectorIndex.java
index 8de67d84..849e0fd6 100644
--- a/src/de/lmu/ifi/dbs/elki/index/preprocessed/preference/HiSCPreferenceVectorIndex.java
+++ b/src/de/lmu/ifi/dbs/elki/index/preprocessed/preference/HiSCPreferenceVectorIndex.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.index.preprocessed.preference;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.BitSet;
import java.util.Iterator;
diff --git a/src/de/lmu/ifi/dbs/elki/index/preprocessed/preference/PreferenceVectorIndex.java b/src/de/lmu/ifi/dbs/elki/index/preprocessed/preference/PreferenceVectorIndex.java
index f4a6b686..1f2dd10b 100644
--- a/src/de/lmu/ifi/dbs/elki/index/preprocessed/preference/PreferenceVectorIndex.java
+++ b/src/de/lmu/ifi/dbs/elki/index/preprocessed/preference/PreferenceVectorIndex.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.index.preprocessed.preference;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.BitSet;
diff --git a/src/de/lmu/ifi/dbs/elki/index/preprocessed/snn/SharedNearestNeighborIndex.java b/src/de/lmu/ifi/dbs/elki/index/preprocessed/snn/SharedNearestNeighborIndex.java
index 46ee9735..7920fc2b 100644
--- a/src/de/lmu/ifi/dbs/elki/index/preprocessed/snn/SharedNearestNeighborIndex.java
+++ b/src/de/lmu/ifi/dbs/elki/index/preprocessed/snn/SharedNearestNeighborIndex.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.index.preprocessed.snn;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.database.ids.DBID;
import de.lmu.ifi.dbs.elki.database.ids.TreeSetDBIDs;
diff --git a/src/de/lmu/ifi/dbs/elki/index/preprocessed/snn/SharedNearestNeighborPreprocessor.java b/src/de/lmu/ifi/dbs/elki/index/preprocessed/snn/SharedNearestNeighborPreprocessor.java
index a4a3590e..43bd7e30 100644
--- a/src/de/lmu/ifi/dbs/elki/index/preprocessed/snn/SharedNearestNeighborPreprocessor.java
+++ b/src/de/lmu/ifi/dbs/elki/index/preprocessed/snn/SharedNearestNeighborPreprocessor.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.index.preprocessed.snn;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.List;
diff --git a/src/de/lmu/ifi/dbs/elki/index/preprocessed/subspaceproj/AbstractSubspaceProjectionIndex.java b/src/de/lmu/ifi/dbs/elki/index/preprocessed/subspaceproj/AbstractSubspaceProjectionIndex.java
index 2732e246..8aef442b 100644
--- a/src/de/lmu/ifi/dbs/elki/index/preprocessed/subspaceproj/AbstractSubspaceProjectionIndex.java
+++ b/src/de/lmu/ifi/dbs/elki/index/preprocessed/subspaceproj/AbstractSubspaceProjectionIndex.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.index.preprocessed.subspaceproj;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.ArrayList;
import java.util.List;
diff --git a/src/de/lmu/ifi/dbs/elki/index/preprocessed/subspaceproj/FourCSubspaceIndex.java b/src/de/lmu/ifi/dbs/elki/index/preprocessed/subspaceproj/FourCSubspaceIndex.java
index 873b1084..5a7fe2e0 100644
--- a/src/de/lmu/ifi/dbs/elki/index/preprocessed/subspaceproj/FourCSubspaceIndex.java
+++ b/src/de/lmu/ifi/dbs/elki/index/preprocessed/subspaceproj/FourCSubspaceIndex.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.index.preprocessed.subspaceproj;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.ArrayList;
import java.util.List;
diff --git a/src/de/lmu/ifi/dbs/elki/index/preprocessed/subspaceproj/PreDeConSubspaceIndex.java b/src/de/lmu/ifi/dbs/elki/index/preprocessed/subspaceproj/PreDeConSubspaceIndex.java
index 980f5650..cc05bcd1 100644
--- a/src/de/lmu/ifi/dbs/elki/index/preprocessed/subspaceproj/PreDeConSubspaceIndex.java
+++ b/src/de/lmu/ifi/dbs/elki/index/preprocessed/subspaceproj/PreDeConSubspaceIndex.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.index.preprocessed.subspaceproj;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.List;
diff --git a/src/de/lmu/ifi/dbs/elki/index/preprocessed/subspaceproj/SubspaceProjectionIndex.java b/src/de/lmu/ifi/dbs/elki/index/preprocessed/subspaceproj/SubspaceProjectionIndex.java
index 024da139..d0630aac 100644
--- a/src/de/lmu/ifi/dbs/elki/index/preprocessed/subspaceproj/SubspaceProjectionIndex.java
+++ b/src/de/lmu/ifi/dbs/elki/index/preprocessed/subspaceproj/SubspaceProjectionIndex.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.index.preprocessed.subspaceproj;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.data.NumberVector;
import de.lmu.ifi.dbs.elki.database.ids.DBID;
diff --git a/src/de/lmu/ifi/dbs/elki/index/tree/AbstractDirectoryEntry.java b/src/de/lmu/ifi/dbs/elki/index/tree/AbstractDirectoryEntry.java
index bb09b9de..2c764231 100644
--- a/src/de/lmu/ifi/dbs/elki/index/tree/AbstractDirectoryEntry.java
+++ b/src/de/lmu/ifi/dbs/elki/index/tree/AbstractDirectoryEntry.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.index.tree;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.io.IOException;
import java.io.ObjectInput;
diff --git a/src/de/lmu/ifi/dbs/elki/index/tree/AbstractLeafEntry.java b/src/de/lmu/ifi/dbs/elki/index/tree/AbstractLeafEntry.java
index eda7a91c..2183888f 100644
--- a/src/de/lmu/ifi/dbs/elki/index/tree/AbstractLeafEntry.java
+++ b/src/de/lmu/ifi/dbs/elki/index/tree/AbstractLeafEntry.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.index.tree;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.io.IOException;
import java.io.ObjectInput;
diff --git a/src/de/lmu/ifi/dbs/elki/index/tree/AbstractNode.java b/src/de/lmu/ifi/dbs/elki/index/tree/AbstractNode.java
index 8ddaf259..242267d6 100644
--- a/src/de/lmu/ifi/dbs/elki/index/tree/AbstractNode.java
+++ b/src/de/lmu/ifi/dbs/elki/index/tree/AbstractNode.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.index.tree;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.io.IOException;
import java.io.ObjectInput;
diff --git a/src/de/lmu/ifi/dbs/elki/index/tree/BreadthFirstEnumeration.java b/src/de/lmu/ifi/dbs/elki/index/tree/BreadthFirstEnumeration.java
index e2df4711..f7f1c247 100644
--- a/src/de/lmu/ifi/dbs/elki/index/tree/BreadthFirstEnumeration.java
+++ b/src/de/lmu/ifi/dbs/elki/index/tree/BreadthFirstEnumeration.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.index.tree;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.Enumeration;
import java.util.LinkedList;
diff --git a/src/de/lmu/ifi/dbs/elki/index/tree/DirectoryEntry.java b/src/de/lmu/ifi/dbs/elki/index/tree/DirectoryEntry.java
index da24d119..c380dd4f 100644
--- a/src/de/lmu/ifi/dbs/elki/index/tree/DirectoryEntry.java
+++ b/src/de/lmu/ifi/dbs/elki/index/tree/DirectoryEntry.java
@@ -1,26 +1,28 @@
package de.lmu.ifi.dbs.elki.index.tree;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
+
/**
* Directory Entry
diff --git a/src/de/lmu/ifi/dbs/elki/index/tree/DistanceEntry.java b/src/de/lmu/ifi/dbs/elki/index/tree/DistanceEntry.java
index 6b7bba4f..63aa5978 100644
--- a/src/de/lmu/ifi/dbs/elki/index/tree/DistanceEntry.java
+++ b/src/de/lmu/ifi/dbs/elki/index/tree/DistanceEntry.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.index.tree;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.distance.distancevalue.Distance;
diff --git a/src/de/lmu/ifi/dbs/elki/index/tree/Entry.java b/src/de/lmu/ifi/dbs/elki/index/tree/Entry.java
index b322088d..9ac01380 100644
--- a/src/de/lmu/ifi/dbs/elki/index/tree/Entry.java
+++ b/src/de/lmu/ifi/dbs/elki/index/tree/Entry.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.index.tree;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.io.Externalizable;
diff --git a/src/de/lmu/ifi/dbs/elki/index/tree/IndexTree.java b/src/de/lmu/ifi/dbs/elki/index/tree/IndexTree.java
index 63f3ffa0..f16b0e0e 100644
--- a/src/de/lmu/ifi/dbs/elki/index/tree/IndexTree.java
+++ b/src/de/lmu/ifi/dbs/elki/index/tree/IndexTree.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.index.tree;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.logging.Logging;
import de.lmu.ifi.dbs.elki.persistent.PageFile;
diff --git a/src/de/lmu/ifi/dbs/elki/index/tree/IndexTreePath.java b/src/de/lmu/ifi/dbs/elki/index/tree/IndexTreePath.java
index 6168f85a..c8fa3e82 100644
--- a/src/de/lmu/ifi/dbs/elki/index/tree/IndexTreePath.java
+++ b/src/de/lmu/ifi/dbs/elki/index/tree/IndexTreePath.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.index.tree;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.ArrayList;
import java.util.Collections;
diff --git a/src/de/lmu/ifi/dbs/elki/index/tree/LeafEntry.java b/src/de/lmu/ifi/dbs/elki/index/tree/LeafEntry.java
index 3ea1794d..362e2daf 100644
--- a/src/de/lmu/ifi/dbs/elki/index/tree/LeafEntry.java
+++ b/src/de/lmu/ifi/dbs/elki/index/tree/LeafEntry.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.index.tree;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.database.ids.DBID;
diff --git a/src/de/lmu/ifi/dbs/elki/index/tree/Node.java b/src/de/lmu/ifi/dbs/elki/index/tree/Node.java
index fbd947bc..62892a22 100644
--- a/src/de/lmu/ifi/dbs/elki/index/tree/Node.java
+++ b/src/de/lmu/ifi/dbs/elki/index/tree/Node.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.index.tree;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.Enumeration;
diff --git a/src/de/lmu/ifi/dbs/elki/index/tree/TreeIndexFactory.java b/src/de/lmu/ifi/dbs/elki/index/tree/TreeIndexFactory.java
index 13de57ba..fc479cba 100644
--- a/src/de/lmu/ifi/dbs/elki/index/tree/TreeIndexFactory.java
+++ b/src/de/lmu/ifi/dbs/elki/index/tree/TreeIndexFactory.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.index.tree;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.database.relation.Relation;
import de.lmu.ifi.dbs.elki.index.Index;
diff --git a/src/de/lmu/ifi/dbs/elki/index/tree/TreeIndexHeader.java b/src/de/lmu/ifi/dbs/elki/index/tree/TreeIndexHeader.java
index 490b68b3..3bb901e3 100644
--- a/src/de/lmu/ifi/dbs/elki/index/tree/TreeIndexHeader.java
+++ b/src/de/lmu/ifi/dbs/elki/index/tree/TreeIndexHeader.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.index.tree;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.io.ByteArrayInputStream;
import java.io.ByteArrayOutputStream;
diff --git a/src/de/lmu/ifi/dbs/elki/index/tree/TreeIndexPathComponent.java b/src/de/lmu/ifi/dbs/elki/index/tree/TreeIndexPathComponent.java
index a5490faf..1cc170f3 100644
--- a/src/de/lmu/ifi/dbs/elki/index/tree/TreeIndexPathComponent.java
+++ b/src/de/lmu/ifi/dbs/elki/index/tree/TreeIndexPathComponent.java
@@ -1,26 +1,28 @@
package de.lmu.ifi.dbs.elki.index.tree;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
/**
* Represents a component in an IndexPath. A component in an IndexPath consists
diff --git a/src/de/lmu/ifi/dbs/elki/index/tree/metrical/MetricalIndexTree.java b/src/de/lmu/ifi/dbs/elki/index/tree/metrical/MetricalIndexTree.java
index e1595cf3..606921df 100644
--- a/src/de/lmu/ifi/dbs/elki/index/tree/metrical/MetricalIndexTree.java
+++ b/src/de/lmu/ifi/dbs/elki/index/tree/metrical/MetricalIndexTree.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.index.tree.metrical;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.List;
diff --git a/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/AbstractMTree.java b/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/AbstractMTree.java
index 6e41b654..db4b5c07 100644
--- a/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/AbstractMTree.java
+++ b/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/AbstractMTree.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants;
-/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.ArrayList;
import java.util.Collections;
@@ -231,7 +232,7 @@ public abstract class AbstractMTree<O, D extends Distance<D>, N extends Abstract
}
@Override
- protected final void createEmptyRoot(@SuppressWarnings("unused") E exampleLeaf) {
+ protected final void createEmptyRoot(E exampleLeaf) {
N root = createNewLeafNode();
writeNode(root);
}
diff --git a/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/AbstractMTreeFactory.java b/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/AbstractMTreeFactory.java
index aa17e67f..a7d701fa 100644
--- a/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/AbstractMTreeFactory.java
+++ b/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/AbstractMTreeFactory.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.data.type.TypeInformation;
import de.lmu.ifi.dbs.elki.distance.distancefunction.DistanceFunction;
@@ -42,9 +43,11 @@ import de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters.ObjectParameter;
*
* @param <O> Object type
* @param <D> Distance type
+ * @param <N> Node type
+ * @param <E> Entry type
* @param <I> Index type
*/
-public abstract class AbstractMTreeFactory<O, D extends Distance<D>, I extends AbstractMTree<O, D, ?, ?> & Index> extends TreeIndexFactory<O, I> {
+public abstract class AbstractMTreeFactory<O, D extends Distance<D>, N extends AbstractMTreeNode<O, D, N, E>, E extends MTreeEntry<D>, I extends AbstractMTree<O, D, N, E> & Index> extends TreeIndexFactory<O, I> {
/**
* Parameter to specify the distance function to determine the distance
* between database objects, must extend
@@ -92,6 +95,7 @@ public abstract class AbstractMTreeFactory<O, D extends Distance<D>, I extends A
*/
public static abstract class Parameterizer<O, D extends Distance<D>> extends TreeIndexFactory.Parameterizer<O> {
protected DistanceFunction<O, D> distanceFunction = null;
+
@Override
protected void makeOptions(Parameterization config) {
super.makeOptions(config);
@@ -102,6 +106,6 @@ public abstract class AbstractMTreeFactory<O, D extends Distance<D>, I extends A
}
@Override
- protected abstract AbstractMTreeFactory<O, D, ?> makeInstance();
+ protected abstract AbstractMTreeFactory<O, D, ?, ?, ?> makeInstance();
}
} \ No newline at end of file
diff --git a/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/AbstractMTreeNode.java b/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/AbstractMTreeNode.java
index 7b7e241d..3fec4706 100644
--- a/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/AbstractMTreeNode.java
+++ b/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/AbstractMTreeNode.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.logging.Logger;
diff --git a/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/MTreeDirectoryEntry.java b/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/MTreeDirectoryEntry.java
index 42c25ad3..5729115a 100644
--- a/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/MTreeDirectoryEntry.java
+++ b/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/MTreeDirectoryEntry.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.io.IOException;
import java.io.ObjectInput;
diff --git a/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/MTreeEntry.java b/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/MTreeEntry.java
index ef21c3fa..0683a061 100644
--- a/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/MTreeEntry.java
+++ b/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/MTreeEntry.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.database.ids.DBID;
import de.lmu.ifi.dbs.elki.distance.distancevalue.Distance;
diff --git a/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/MTreeLeafEntry.java b/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/MTreeLeafEntry.java
index 7205a58f..aae51378 100644
--- a/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/MTreeLeafEntry.java
+++ b/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/MTreeLeafEntry.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants;
-/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.io.IOException;
import java.io.ObjectInput;
@@ -84,7 +85,7 @@ public class MTreeLeafEntry<D extends Distance<D>> extends AbstractLeafEntry imp
* assigned a routing object.
*/
@Override
- public final void setRoutingObjectID(@SuppressWarnings("unused") DBID objectID) {
+ public final void setRoutingObjectID(DBID objectID) {
throw new UnsupportedOperationException("Leaf entries should not be assigned a routing object.");
// super.setEntryID(objectID.getIntegerID());
}
@@ -130,7 +131,7 @@ public class MTreeLeafEntry<D extends Distance<D>> extends AbstractLeafEntry imp
* radius
*/
@Override
- public void setCoveringRadius(@SuppressWarnings("unused") D coveringRadius) {
+ public void setCoveringRadius(D coveringRadius) {
throw new UnsupportedOperationException("This entry is not a directory entry!");
}
diff --git a/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/mktrees/AbstractMkTree.java b/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/mktrees/AbstractMkTree.java
index f6f2a906..00cf45a7 100644
--- a/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/mktrees/AbstractMkTree.java
+++ b/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/mktrees/AbstractMkTree.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mktrees;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.List;
diff --git a/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/mktrees/AbstractMkTreeUnified.java b/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/mktrees/AbstractMkTreeUnified.java
index 6c8b0de5..f7135682 100644
--- a/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/mktrees/AbstractMkTreeUnified.java
+++ b/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/mktrees/AbstractMkTreeUnified.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mktrees;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.HashMap;
import java.util.List;
diff --git a/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/mktrees/AbstractMkTreeUnifiedFactory.java b/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/mktrees/AbstractMkTreeUnifiedFactory.java
index 0bc1bfd1..dd1648a0 100644
--- a/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/mktrees/AbstractMkTreeUnifiedFactory.java
+++ b/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/mktrees/AbstractMkTreeUnifiedFactory.java
@@ -1,31 +1,34 @@
package de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mktrees;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.distance.distancefunction.DistanceFunction;
import de.lmu.ifi.dbs.elki.distance.distancevalue.Distance;
import de.lmu.ifi.dbs.elki.index.Index;
import de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.AbstractMTreeFactory;
+import de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.AbstractMTreeNode;
+import de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.MTreeEntry;
import de.lmu.ifi.dbs.elki.utilities.optionhandling.OptionID;
import de.lmu.ifi.dbs.elki.utilities.optionhandling.constraints.GreaterConstraint;
import de.lmu.ifi.dbs.elki.utilities.optionhandling.parameterization.Parameterization;
@@ -40,9 +43,11 @@ import de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters.IntParameter;
*
* @param <O> Object type
* @param <D> Distance type
+ * @param <N> Node type
+ * @param <E> Entry type
* @param <I> Index type
*/
-public abstract class AbstractMkTreeUnifiedFactory<O, D extends Distance<D>, I extends AbstractMkTree<O, D, ?, ?> & Index> extends AbstractMTreeFactory<O, D, I> {
+public abstract class AbstractMkTreeUnifiedFactory<O, D extends Distance<D>, N extends AbstractMTreeNode<O, D, N, E>, E extends MTreeEntry<D>, I extends AbstractMkTree<O, D, N, E> & Index> extends AbstractMTreeFactory<O, D, N, E, I> {
/**
* Parameter specifying the maximal number k of reverse k nearest neighbors to
* be supported, must be an integer greater than 0.
@@ -92,6 +97,6 @@ public abstract class AbstractMkTreeUnifiedFactory<O, D extends Distance<D>, I e
}
@Override
- protected abstract AbstractMkTreeUnifiedFactory<O, D, ?> makeInstance();
+ protected abstract AbstractMkTreeUnifiedFactory<O, D, ?, ?, ?> makeInstance();
}
} \ No newline at end of file
diff --git a/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/mktrees/MkTreeHeader.java b/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/mktrees/MkTreeHeader.java
index cabd1b3f..809bc72b 100644
--- a/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/mktrees/MkTreeHeader.java
+++ b/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/mktrees/MkTreeHeader.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mktrees;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.index.tree.TreeIndexHeader;
diff --git a/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/mktrees/mkapp/MkAppDirectoryEntry.java b/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/mktrees/mkapp/MkAppDirectoryEntry.java
index 90d68bcf..39d420ba 100644
--- a/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/mktrees/mkapp/MkAppDirectoryEntry.java
+++ b/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/mktrees/mkapp/MkAppDirectoryEntry.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mktrees.mkapp;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.io.IOException;
import java.io.ObjectInput;
diff --git a/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/mktrees/mkapp/MkAppEntry.java b/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/mktrees/mkapp/MkAppEntry.java
index 18928854..cc56d1fb 100644
--- a/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/mktrees/mkapp/MkAppEntry.java
+++ b/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/mktrees/mkapp/MkAppEntry.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mktrees.mkapp;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.distance.distancevalue.NumberDistance;
import de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.MTreeEntry;
diff --git a/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/mktrees/mkapp/MkAppLeafEntry.java b/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/mktrees/mkapp/MkAppLeafEntry.java
index 944aed7c..961cdd92 100644
--- a/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/mktrees/mkapp/MkAppLeafEntry.java
+++ b/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/mktrees/mkapp/MkAppLeafEntry.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mktrees.mkapp;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.io.IOException;
import java.io.ObjectInput;
diff --git a/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/mktrees/mkapp/MkAppTree.java b/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/mktrees/mkapp/MkAppTree.java
index f4ceff14..c0fe4523 100644
--- a/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/mktrees/mkapp/MkAppTree.java
+++ b/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/mktrees/mkapp/MkAppTree.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mktrees.mkapp;
-/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.ArrayList;
import java.util.Collections;
@@ -103,7 +104,6 @@ public class MkAppTree<O, D extends NumberDistance<D, ?>> extends AbstractMkTree
/**
* @throws UnsupportedOperationException since this operation is not supported
*/
- @SuppressWarnings("unused")
@Override
public void insert(MkAppEntry<D> id, boolean withPreInsert) {
throw new UnsupportedOperationException("Insertion of single objects is not supported!");
@@ -112,7 +112,6 @@ public class MkAppTree<O, D extends NumberDistance<D, ?>> extends AbstractMkTree
/**
* @throws UnsupportedOperationException since this operation is not supported
*/
- @SuppressWarnings("unused")
@Override
protected void preInsert(MkAppEntry<D> entry) {
throw new UnsupportedOperationException("Insertion of single objects is not supported!");
diff --git a/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/mktrees/mkapp/MkAppTreeFactory.java b/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/mktrees/mkapp/MkAppTreeFactory.java
index 9ec6ec75..540182e8 100644
--- a/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/mktrees/mkapp/MkAppTreeFactory.java
+++ b/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/mktrees/mkapp/MkAppTreeFactory.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mktrees.mkapp;
-/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.database.relation.Relation;
import de.lmu.ifi.dbs.elki.distance.distancefunction.DistanceFunction;
@@ -45,7 +46,7 @@ import de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters.IntParameter;
* @param <O> Object type
* @param <D> Distance type
*/
-public class MkAppTreeFactory<O, D extends NumberDistance<D, ?>> extends AbstractMTreeFactory<O, D, MkAppTreeIndex<O, D>> {
+public class MkAppTreeFactory<O, D extends NumberDistance<D, ?>> extends AbstractMTreeFactory<O, D, MkAppTreeNode<O, D>, MkAppEntry<D>, MkAppTreeIndex<O, D>> {
/**
* Parameter for nolog
*/
diff --git a/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/mktrees/mkapp/MkAppTreeIndex.java b/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/mktrees/mkapp/MkAppTreeIndex.java
index 2d986862..cd7042d6 100644
--- a/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/mktrees/mkapp/MkAppTreeIndex.java
+++ b/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/mktrees/mkapp/MkAppTreeIndex.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mktrees.mkapp;
-/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.ArrayList;
import java.util.List;
@@ -90,7 +91,6 @@ public class MkAppTreeIndex<O, D extends NumberDistance<D, ?>> extends MkAppTree
return new MkAppLeafEntry<D>(id, parentDistance, null);
}
- @SuppressWarnings("unused")
@Override
public void insert(DBID id) {
throw new UnsupportedOperationException("Insertion of single objects is not supported!");
@@ -113,7 +113,6 @@ public class MkAppTreeIndex<O, D extends NumberDistance<D, ?>> extends MkAppTree
* @throws UnsupportedOperationException thrown, since deletions aren't
* implemented yet.
*/
- @SuppressWarnings("unused")
@Override
public final boolean delete(DBID id) {
throw new UnsupportedOperationException(ExceptionMessages.UNSUPPORTED_NOT_YET);
@@ -126,7 +125,6 @@ public class MkAppTreeIndex<O, D extends NumberDistance<D, ?>> extends MkAppTree
* @throws UnsupportedOperationException thrown, since deletions aren't
* implemented yet.
*/
- @SuppressWarnings("unused")
@Override
public void deleteAll(DBIDs ids) {
throw new UnsupportedOperationException(ExceptionMessages.UNSUPPORTED_NOT_YET);
diff --git a/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/mktrees/mkapp/MkAppTreeNode.java b/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/mktrees/mkapp/MkAppTreeNode.java
index 680c0413..cd1a1c3b 100644
--- a/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/mktrees/mkapp/MkAppTreeNode.java
+++ b/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/mktrees/mkapp/MkAppTreeNode.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mktrees.mkapp;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.Arrays;
import java.util.logging.Logger;
diff --git a/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/mktrees/mkapp/PolynomialApproximation.java b/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/mktrees/mkapp/PolynomialApproximation.java
index 659a5850..d32c1c0c 100644
--- a/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/mktrees/mkapp/PolynomialApproximation.java
+++ b/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/mktrees/mkapp/PolynomialApproximation.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mktrees.mkapp;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.io.Externalizable;
import java.io.IOException;
diff --git a/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/mktrees/mkcop/ApproximationLine.java b/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/mktrees/mkcop/ApproximationLine.java
index 14d702a5..0e7ccaf7 100644
--- a/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/mktrees/mkcop/ApproximationLine.java
+++ b/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/mktrees/mkcop/ApproximationLine.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mktrees.mkcop;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.io.Externalizable;
import java.io.IOException;
diff --git a/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/mktrees/mkcop/ConvexHull.java b/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/mktrees/mkcop/ConvexHull.java
index 626e8abb..d87986cb 100644
--- a/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/mktrees/mkcop/ConvexHull.java
+++ b/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/mktrees/mkcop/ConvexHull.java
@@ -1,26 +1,28 @@
package de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mktrees.mkcop;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
+
/**
* Holds the lower and upper hull for some values.
diff --git a/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/mktrees/mkcop/MkCoPDirectoryEntry.java b/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/mktrees/mkcop/MkCoPDirectoryEntry.java
index cfed84fb..dd267d95 100644
--- a/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/mktrees/mkcop/MkCoPDirectoryEntry.java
+++ b/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/mktrees/mkcop/MkCoPDirectoryEntry.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mktrees.mkcop;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.io.IOException;
import java.io.ObjectInput;
diff --git a/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/mktrees/mkcop/MkCoPEntry.java b/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/mktrees/mkcop/MkCoPEntry.java
index f885e6f7..bdc83f17 100644
--- a/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/mktrees/mkcop/MkCoPEntry.java
+++ b/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/mktrees/mkcop/MkCoPEntry.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mktrees.mkcop;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.database.query.distance.DistanceQuery;
import de.lmu.ifi.dbs.elki.distance.distancevalue.NumberDistance;
diff --git a/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/mktrees/mkcop/MkCoPLeafEntry.java b/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/mktrees/mkcop/MkCoPLeafEntry.java
index a2c85186..9f4da83f 100644
--- a/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/mktrees/mkcop/MkCoPLeafEntry.java
+++ b/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/mktrees/mkcop/MkCoPLeafEntry.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mktrees.mkcop;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.io.IOException;
import java.io.ObjectInput;
diff --git a/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/mktrees/mkcop/MkCoPTree.java b/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/mktrees/mkcop/MkCoPTree.java
index 329e608b..e6abc753 100644
--- a/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/mktrees/mkcop/MkCoPTree.java
+++ b/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/mktrees/mkcop/MkCoPTree.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mktrees.mkcop;
-/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.ArrayList;
import java.util.Collections;
@@ -102,7 +103,6 @@ public class MkCoPTree<O, D extends NumberDistance<D, ?>> extends AbstractMkTree
/**
* @throws UnsupportedOperationException since this operation is not supported
*/
- @SuppressWarnings("unused")
@Override
protected void preInsert(MkCoPEntry<D> entry) {
throw new UnsupportedOperationException("Insertion of single objects is not supported!");
@@ -111,7 +111,6 @@ public class MkCoPTree<O, D extends NumberDistance<D, ?>> extends AbstractMkTree
/**
* @throws UnsupportedOperationException since this operation is not supported
*/
- @SuppressWarnings("unused")
@Override
public void insert(MkCoPEntry<D> entry, boolean withPreInsert) {
throw new UnsupportedOperationException("Insertion of single objects is not supported!");
diff --git a/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/mktrees/mkcop/MkCoPTreeIndex.java b/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/mktrees/mkcop/MkCoPTreeIndex.java
index 7433462a..d920cdab 100644
--- a/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/mktrees/mkcop/MkCoPTreeIndex.java
+++ b/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/mktrees/mkcop/MkCoPTreeIndex.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mktrees.mkcop;
-/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.ArrayList;
import java.util.List;
@@ -89,7 +90,6 @@ public class MkCoPTreeIndex<O, D extends NumberDistance<D, ?>> extends MkCoPTree
return leafEntry;
}
- @SuppressWarnings("unused")
@Override
public void insert(DBID id) {
throw new UnsupportedOperationException("Insertion of single objects is not supported!");
@@ -112,7 +112,6 @@ public class MkCoPTreeIndex<O, D extends NumberDistance<D, ?>> extends MkCoPTree
* @throws UnsupportedOperationException thrown, since deletions aren't
* implemented yet.
*/
- @SuppressWarnings("unused")
@Override
public final boolean delete(DBID id) {
throw new UnsupportedOperationException(ExceptionMessages.UNSUPPORTED_NOT_YET);
@@ -125,7 +124,6 @@ public class MkCoPTreeIndex<O, D extends NumberDistance<D, ?>> extends MkCoPTree
* @throws UnsupportedOperationException thrown, since deletions aren't
* implemented yet.
*/
- @SuppressWarnings("unused")
@Override
public void deleteAll(DBIDs ids) {
throw new UnsupportedOperationException(ExceptionMessages.UNSUPPORTED_NOT_YET);
diff --git a/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/mktrees/mkcop/MkCoPTreeNode.java b/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/mktrees/mkcop/MkCoPTreeNode.java
index 268b53df..3fafb5fc 100644
--- a/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/mktrees/mkcop/MkCoPTreeNode.java
+++ b/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/mktrees/mkcop/MkCoPTreeNode.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mktrees.mkcop;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.logging.Logger;
diff --git a/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/mktrees/mkcop/MkCopTreeFactory.java b/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/mktrees/mkcop/MkCopTreeFactory.java
index 19402f1c..67968259 100644
--- a/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/mktrees/mkcop/MkCopTreeFactory.java
+++ b/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/mktrees/mkcop/MkCopTreeFactory.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mktrees.mkcop;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.database.relation.Relation;
import de.lmu.ifi.dbs.elki.distance.distancefunction.DistanceFunction;
@@ -44,7 +45,7 @@ import de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters.IntParameter;
* @param <O> Object type
* @param <D> Distance type
*/
-public class MkCopTreeFactory<O, D extends NumberDistance<D, ?>> extends AbstractMTreeFactory<O, D, MkCoPTreeIndex<O, D>> {
+public class MkCopTreeFactory<O, D extends NumberDistance<D, ?>> extends AbstractMTreeFactory<O, D, MkCoPTreeNode<O, D>, MkCoPEntry<D>, MkCoPTreeIndex<O, D>> {
/**
* Parameter for k
*/
diff --git a/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/mktrees/mkmax/MkMaxDirectoryEntry.java b/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/mktrees/mkmax/MkMaxDirectoryEntry.java
index 00a97cf1..0de76f2f 100644
--- a/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/mktrees/mkmax/MkMaxDirectoryEntry.java
+++ b/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/mktrees/mkmax/MkMaxDirectoryEntry.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mktrees.mkmax;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.io.IOException;
import java.io.ObjectInput;
diff --git a/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/mktrees/mkmax/MkMaxEntry.java b/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/mktrees/mkmax/MkMaxEntry.java
index 478b1203..141037c7 100644
--- a/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/mktrees/mkmax/MkMaxEntry.java
+++ b/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/mktrees/mkmax/MkMaxEntry.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mktrees.mkmax;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.distance.distancevalue.Distance;
import de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.MTreeEntry;
diff --git a/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/mktrees/mkmax/MkMaxLeafEntry.java b/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/mktrees/mkmax/MkMaxLeafEntry.java
index f60e8513..0a8ee091 100644
--- a/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/mktrees/mkmax/MkMaxLeafEntry.java
+++ b/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/mktrees/mkmax/MkMaxLeafEntry.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mktrees.mkmax;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.io.IOException;
import java.io.ObjectInput;
diff --git a/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/mktrees/mkmax/MkMaxTree.java b/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/mktrees/mkmax/MkMaxTree.java
index d8bc629d..0e637c57 100644
--- a/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/mktrees/mkmax/MkMaxTree.java
+++ b/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/mktrees/mkmax/MkMaxTree.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mktrees.mkmax;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.ArrayList;
import java.util.Collections;
diff --git a/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/mktrees/mkmax/MkMaxTreeFactory.java b/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/mktrees/mkmax/MkMaxTreeFactory.java
index f59c3790..ba630c4e 100644
--- a/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/mktrees/mkmax/MkMaxTreeFactory.java
+++ b/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/mktrees/mkmax/MkMaxTreeFactory.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mktrees.mkmax;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.database.relation.Relation;
import de.lmu.ifi.dbs.elki.distance.distancefunction.DistanceFunction;
@@ -40,7 +41,7 @@ import de.lmu.ifi.dbs.elki.utilities.ClassGenericsUtil;
* @param <O> Object type
* @param <D> Distance type
*/
-public class MkMaxTreeFactory<O, D extends Distance<D>> extends AbstractMkTreeUnifiedFactory<O, D, MkMaxTreeIndex<O, D>> {
+public class MkMaxTreeFactory<O, D extends Distance<D>> extends AbstractMkTreeUnifiedFactory<O, D, MkMaxTreeNode<O, D>, MkMaxEntry<D>, MkMaxTreeIndex<O, D>> {
/**
* Constructor.
*
diff --git a/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/mktrees/mkmax/MkMaxTreeIndex.java b/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/mktrees/mkmax/MkMaxTreeIndex.java
index 576e6954..e3aed27e 100644
--- a/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/mktrees/mkmax/MkMaxTreeIndex.java
+++ b/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/mktrees/mkmax/MkMaxTreeIndex.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mktrees.mkmax;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.ArrayList;
import java.util.List;
@@ -68,7 +69,7 @@ public class MkMaxTreeIndex<O, D extends Distance<D>> extends MkMaxTree<O, D> im
/**
* @return a new MkMaxLeafEntry representing the specified data object
*/
- protected MkMaxLeafEntry<D> createNewLeafEntry(DBID id, @SuppressWarnings("unused") O object, D parentDistance) {
+ protected MkMaxLeafEntry<D> createNewLeafEntry(DBID id, O object, D parentDistance) {
KNNHeap<D> knnList = new KNNHeap<D>(getKmax() - 1);
doKNNQuery(id, knnList);
D knnDistance = knnList.getMaximumDistance();
@@ -97,7 +98,6 @@ public class MkMaxTreeIndex<O, D extends Distance<D>> extends MkMaxTree<O, D> im
* @throws UnsupportedOperationException thrown, since deletions aren't
* implemented yet.
*/
- @SuppressWarnings("unused")
@Override
public final boolean delete(DBID id) {
throw new UnsupportedOperationException(ExceptionMessages.UNSUPPORTED_NOT_YET);
@@ -110,7 +110,6 @@ public class MkMaxTreeIndex<O, D extends Distance<D>> extends MkMaxTree<O, D> im
* @throws UnsupportedOperationException thrown, since deletions aren't
* implemented yet.
*/
- @SuppressWarnings("unused")
@Override
public void deleteAll(DBIDs ids) {
throw new UnsupportedOperationException(ExceptionMessages.UNSUPPORTED_NOT_YET);
diff --git a/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/mktrees/mkmax/MkMaxTreeNode.java b/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/mktrees/mkmax/MkMaxTreeNode.java
index 70978410..345829f1 100644
--- a/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/mktrees/mkmax/MkMaxTreeNode.java
+++ b/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/mktrees/mkmax/MkMaxTreeNode.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mktrees.mkmax;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.database.ids.DBID;
import de.lmu.ifi.dbs.elki.database.query.distance.DistanceQuery;
diff --git a/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/mktrees/mktab/MkTabDirectoryEntry.java b/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/mktrees/mktab/MkTabDirectoryEntry.java
index ad0c301e..cc431b1e 100644
--- a/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/mktrees/mktab/MkTabDirectoryEntry.java
+++ b/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/mktrees/mktab/MkTabDirectoryEntry.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mktrees.mktab;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.io.IOException;
import java.io.ObjectInput;
diff --git a/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/mktrees/mktab/MkTabEntry.java b/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/mktrees/mktab/MkTabEntry.java
index 4638b574..dfecc0d8 100644
--- a/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/mktrees/mktab/MkTabEntry.java
+++ b/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/mktrees/mktab/MkTabEntry.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mktrees.mktab;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.List;
diff --git a/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/mktrees/mktab/MkTabLeafEntry.java b/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/mktrees/mktab/MkTabLeafEntry.java
index 019c69cc..ad3e999f 100644
--- a/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/mktrees/mktab/MkTabLeafEntry.java
+++ b/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/mktrees/mktab/MkTabLeafEntry.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mktrees.mktab;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.io.IOException;
import java.io.ObjectInput;
diff --git a/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/mktrees/mktab/MkTabTree.java b/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/mktrees/mktab/MkTabTree.java
index 6ac1cd7b..0014593c 100644
--- a/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/mktrees/mktab/MkTabTree.java
+++ b/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/mktrees/mktab/MkTabTree.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mktrees.mktab;
-/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.ArrayList;
import java.util.Collections;
@@ -75,7 +76,7 @@ public class MkTabTree<O, D extends Distance<D>> extends AbstractMkTreeUnified<O
* not supported
*/
@Override
- protected void preInsert(@SuppressWarnings("unused") MkTabEntry<D> entry) {
+ protected void preInsert(MkTabEntry<D> entry) {
throw new UnsupportedOperationException("Insertion of single objects is not supported!");
}
@@ -83,7 +84,6 @@ public class MkTabTree<O, D extends Distance<D>> extends AbstractMkTreeUnified<O
* @throws UnsupportedOperationException since insertion of single objects is
* not supported
*/
- @SuppressWarnings("unused")
@Override
public void insert(MkTabEntry<D> entry, boolean withPreInsert) {
throw new UnsupportedOperationException("Insertion of single objects is not supported!");
diff --git a/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/mktrees/mktab/MkTabTreeFactory.java b/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/mktrees/mktab/MkTabTreeFactory.java
index 07cf8f3d..ea4fbd36 100644
--- a/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/mktrees/mktab/MkTabTreeFactory.java
+++ b/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/mktrees/mktab/MkTabTreeFactory.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mktrees.mktab;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.database.relation.Relation;
import de.lmu.ifi.dbs.elki.distance.distancefunction.DistanceFunction;
@@ -40,7 +41,7 @@ import de.lmu.ifi.dbs.elki.utilities.ClassGenericsUtil;
* @param <O> Object type
* @param <D> Distance type
*/
-public class MkTabTreeFactory<O, D extends Distance<D>> extends AbstractMkTreeUnifiedFactory<O, D, MkTabTreeIndex<O, D>> {
+public class MkTabTreeFactory<O, D extends Distance<D>> extends AbstractMkTreeUnifiedFactory<O, D, MkTabTreeNode<O, D>, MkTabEntry<D>, MkTabTreeIndex<O, D>> {
/**
* Constructor.
*
diff --git a/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/mktrees/mktab/MkTabTreeIndex.java b/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/mktrees/mktab/MkTabTreeIndex.java
index 7db3fd92..dc59b7cc 100644
--- a/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/mktrees/mktab/MkTabTreeIndex.java
+++ b/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/mktrees/mktab/MkTabTreeIndex.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mktrees.mktab;
-/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.ArrayList;
import java.util.List;
@@ -106,7 +107,6 @@ public class MkTabTreeIndex<O, D extends Distance<D>> extends MkTabTree<O, D> im
return KNNList.asDistanceList(knns);
}
- @SuppressWarnings("unused")
@Override
public void insert(DBID id) {
throw new UnsupportedOperationException("Insertion of single objects is not supported!");
@@ -129,7 +129,6 @@ public class MkTabTreeIndex<O, D extends Distance<D>> extends MkTabTree<O, D> im
* @throws UnsupportedOperationException thrown, since deletions aren't
* implemented yet.
*/
- @SuppressWarnings("unused")
@Override
public final boolean delete(DBID id) {
throw new UnsupportedOperationException(ExceptionMessages.UNSUPPORTED_NOT_YET);
@@ -142,7 +141,6 @@ public class MkTabTreeIndex<O, D extends Distance<D>> extends MkTabTree<O, D> im
* @throws UnsupportedOperationException thrown, since deletions aren't
* implemented yet.
*/
- @SuppressWarnings("unused")
@Override
public void deleteAll(DBIDs ids) {
throw new UnsupportedOperationException(ExceptionMessages.UNSUPPORTED_NOT_YET);
diff --git a/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/mktrees/mktab/MkTabTreeNode.java b/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/mktrees/mktab/MkTabTreeNode.java
index 053b973d..55dfcbde 100644
--- a/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/mktrees/mktab/MkTabTreeNode.java
+++ b/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/mktrees/mktab/MkTabTreeNode.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mktrees.mktab;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.ArrayList;
import java.util.List;
diff --git a/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/mtree/MTree.java b/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/mtree/MTree.java
index 46d0430b..4e9b4f9e 100644
--- a/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/mtree/MTree.java
+++ b/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/mtree/MTree.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mtree;
-/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.database.ids.DBID;
import de.lmu.ifi.dbs.elki.database.query.distance.DistanceQuery;
@@ -71,7 +72,7 @@ public class MTree<O, D extends Distance<D>> extends AbstractMTree<O, D, MTreeNo
* Does nothing because no operations are necessary before inserting an entry.
*/
@Override
- protected void preInsert(@SuppressWarnings("unused") MTreeEntry<D> entry) {
+ protected void preInsert(MTreeEntry<D> entry) {
// do nothing
}
diff --git a/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/mtree/MTreeFactory.java b/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/mtree/MTreeFactory.java
index 65cde817..190a009d 100644
--- a/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/mtree/MTreeFactory.java
+++ b/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/mtree/MTreeFactory.java
@@ -1,31 +1,33 @@
package de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mtree;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.database.relation.Relation;
import de.lmu.ifi.dbs.elki.distance.distancefunction.DistanceFunction;
import de.lmu.ifi.dbs.elki.distance.distancevalue.Distance;
import de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.AbstractMTreeFactory;
+import de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.MTreeEntry;
import de.lmu.ifi.dbs.elki.persistent.PageFile;
import de.lmu.ifi.dbs.elki.utilities.ClassGenericsUtil;
import de.lmu.ifi.dbs.elki.utilities.optionhandling.parameterization.Parameterization;
@@ -41,7 +43,7 @@ import de.lmu.ifi.dbs.elki.utilities.optionhandling.parameterization.Parameteriz
* @param <O> Object type
* @param <D> Distance type
*/
-public class MTreeFactory<O, D extends Distance<D>> extends AbstractMTreeFactory<O, D, MTreeIndex<O, D>> {
+public class MTreeFactory<O, D extends Distance<D>> extends AbstractMTreeFactory<O, D, MTreeNode<O, D>, MTreeEntry<D>, MTreeIndex<O, D>> {
/**
* Constructor.
*
diff --git a/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/mtree/MTreeIndex.java b/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/mtree/MTreeIndex.java
index 421f0554..2a6d8a91 100644
--- a/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/mtree/MTreeIndex.java
+++ b/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/mtree/MTreeIndex.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mtree;
-/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.ArrayList;
import java.util.List;
@@ -101,7 +102,6 @@ public class MTreeIndex<O, D extends Distance<D>> extends MTree<O, D> implements
* @throws UnsupportedOperationException thrown, since deletions aren't
* implemented yet.
*/
- @SuppressWarnings("unused")
@Override
public final boolean delete(DBID id) {
throw new UnsupportedOperationException(ExceptionMessages.UNSUPPORTED_NOT_YET);
@@ -114,7 +114,6 @@ public class MTreeIndex<O, D extends Distance<D>> extends MTree<O, D> implements
* @throws UnsupportedOperationException thrown, since deletions aren't
* implemented yet.
*/
- @SuppressWarnings("unused")
@Override
public void deleteAll(DBIDs ids) {
throw new UnsupportedOperationException(ExceptionMessages.UNSUPPORTED_NOT_YET);
diff --git a/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/mtree/MTreeNode.java b/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/mtree/MTreeNode.java
index 9afbc7d5..26c2ae00 100644
--- a/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/mtree/MTreeNode.java
+++ b/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/mtree/MTreeNode.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mtree;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.distance.distancevalue.Distance;
import de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.AbstractMTreeNode;
diff --git a/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/query/MetricalIndexKNNQuery.java b/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/query/MetricalIndexKNNQuery.java
index c5c8c4e1..ab99bdd9 100644
--- a/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/query/MetricalIndexKNNQuery.java
+++ b/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/query/MetricalIndexKNNQuery.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.query;
-/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.List;
import java.util.Map;
@@ -158,14 +159,12 @@ public class MetricalIndexKNNQuery<O, D extends Distance<D>> extends AbstractDis
return getKNNForObject(relation.get(id), k);
}
- @SuppressWarnings("unused")
@Override
public List<List<DistanceResultPair<D>>> getKNNForBulkDBIDs(ArrayDBIDs ids, int k) {
// TODO: implement
throw new UnsupportedOperationException(ExceptionMessages.UNSUPPORTED_NOT_YET);
}
- @SuppressWarnings("unused")
@Override
public void getKNNForBulkHeaps(Map<DBID, KNNHeap<D>> heaps) {
// TODO: implement
diff --git a/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/query/MetricalIndexRangeQuery.java b/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/query/MetricalIndexRangeQuery.java
index b9217bfa..5854df8a 100644
--- a/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/query/MetricalIndexRangeQuery.java
+++ b/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/query/MetricalIndexRangeQuery.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.query;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.ArrayList;
import java.util.Collections;
diff --git a/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/query/MkTreeRKNNQuery.java b/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/query/MkTreeRKNNQuery.java
index 5cc3d3ba..38641128 100644
--- a/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/query/MkTreeRKNNQuery.java
+++ b/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/query/MkTreeRKNNQuery.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.query;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.List;
@@ -58,7 +59,6 @@ public class MkTreeRKNNQuery<O, D extends Distance<D>> extends AbstractRKNNQuery
this.index = index;
}
- @SuppressWarnings("unused")
@Override
public List<DistanceResultPair<D>> getRKNNForObject(O obj, int k) {
throw new AbortException("Preprocessor KNN query only supports ID queries.");
@@ -69,7 +69,6 @@ public class MkTreeRKNNQuery<O, D extends Distance<D>> extends AbstractRKNNQuery
return index.reverseKNNQuery(id, k);
}
- @SuppressWarnings("unused")
@Override
public List<List<DistanceResultPair<D>>> getRKNNForBulkDBIDs(ArrayDBIDs ids, int k) {
// TODO: implement
diff --git a/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/split/Assignments.java b/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/split/Assignments.java
index cc2bd5ac..c639f37e 100644
--- a/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/split/Assignments.java
+++ b/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/split/Assignments.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.split;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.database.ids.DBID;
import de.lmu.ifi.dbs.elki.distance.distancevalue.Distance;
diff --git a/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/split/MLBDistSplit.java b/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/split/MLBDistSplit.java
index 41a5f4d8..dc322960 100644
--- a/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/split/MLBDistSplit.java
+++ b/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/split/MLBDistSplit.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.split;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.ArrayList;
import java.util.Collections;
diff --git a/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/split/MRadSplit.java b/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/split/MRadSplit.java
index 2b417d12..c78367ed 100644
--- a/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/split/MRadSplit.java
+++ b/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/split/MRadSplit.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.split;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.database.ids.DBID;
import de.lmu.ifi.dbs.elki.database.query.distance.DistanceQuery;
diff --git a/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/split/MTreeSplit.java b/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/split/MTreeSplit.java
index a7766983..a5fcb349 100644
--- a/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/split/MTreeSplit.java
+++ b/src/de/lmu/ifi/dbs/elki/index/tree/metrical/mtreevariants/split/MTreeSplit.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.split;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.ArrayList;
import java.util.Collections;
diff --git a/src/de/lmu/ifi/dbs/elki/index/tree/query/DoubleDistanceSearchCandidate.java b/src/de/lmu/ifi/dbs/elki/index/tree/query/DoubleDistanceSearchCandidate.java
index c5edddbc..7b1b4a03 100644
--- a/src/de/lmu/ifi/dbs/elki/index/tree/query/DoubleDistanceSearchCandidate.java
+++ b/src/de/lmu/ifi/dbs/elki/index/tree/query/DoubleDistanceSearchCandidate.java
@@ -1,26 +1,28 @@
package de.lmu.ifi.dbs.elki.index.tree.query;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
/**
diff --git a/src/de/lmu/ifi/dbs/elki/index/tree/query/GenericDistanceSearchCandidate.java b/src/de/lmu/ifi/dbs/elki/index/tree/query/GenericDistanceSearchCandidate.java
index 8ab5c28b..7338bdd1 100644
--- a/src/de/lmu/ifi/dbs/elki/index/tree/query/GenericDistanceSearchCandidate.java
+++ b/src/de/lmu/ifi/dbs/elki/index/tree/query/GenericDistanceSearchCandidate.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.index.tree.query;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.distance.distancevalue.Distance;
diff --git a/src/de/lmu/ifi/dbs/elki/index/tree/query/GenericMTreeDistanceSearchCandidate.java b/src/de/lmu/ifi/dbs/elki/index/tree/query/GenericMTreeDistanceSearchCandidate.java
index 569e0314..b9d8ef46 100644
--- a/src/de/lmu/ifi/dbs/elki/index/tree/query/GenericMTreeDistanceSearchCandidate.java
+++ b/src/de/lmu/ifi/dbs/elki/index/tree/query/GenericMTreeDistanceSearchCandidate.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.index.tree.query;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.database.ids.DBID;
import de.lmu.ifi.dbs.elki.distance.distancevalue.Distance;
diff --git a/src/de/lmu/ifi/dbs/elki/index/tree/spatial/SpatialDirectoryEntry.java b/src/de/lmu/ifi/dbs/elki/index/tree/spatial/SpatialDirectoryEntry.java
index 1dda0449..cf83a1a2 100644
--- a/src/de/lmu/ifi/dbs/elki/index/tree/spatial/SpatialDirectoryEntry.java
+++ b/src/de/lmu/ifi/dbs/elki/index/tree/spatial/SpatialDirectoryEntry.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.index.tree.spatial;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.io.IOException;
import java.io.ObjectInput;
diff --git a/src/de/lmu/ifi/dbs/elki/index/tree/spatial/SpatialEntry.java b/src/de/lmu/ifi/dbs/elki/index/tree/spatial/SpatialEntry.java
index a1321766..ffc96b40 100644
--- a/src/de/lmu/ifi/dbs/elki/index/tree/spatial/SpatialEntry.java
+++ b/src/de/lmu/ifi/dbs/elki/index/tree/spatial/SpatialEntry.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.index.tree.spatial;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.data.spatial.SpatialComparable;
import de.lmu.ifi.dbs.elki.index.tree.Entry;
diff --git a/src/de/lmu/ifi/dbs/elki/index/tree/spatial/SpatialIndexTree.java b/src/de/lmu/ifi/dbs/elki/index/tree/spatial/SpatialIndexTree.java
index 0705f966..1d0094dd 100644
--- a/src/de/lmu/ifi/dbs/elki/index/tree/spatial/SpatialIndexTree.java
+++ b/src/de/lmu/ifi/dbs/elki/index/tree/spatial/SpatialIndexTree.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.index.tree.spatial;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.List;
diff --git a/src/de/lmu/ifi/dbs/elki/index/tree/spatial/SpatialNode.java b/src/de/lmu/ifi/dbs/elki/index/tree/spatial/SpatialNode.java
index 2b5eb542..2d0dd857 100644
--- a/src/de/lmu/ifi/dbs/elki/index/tree/spatial/SpatialNode.java
+++ b/src/de/lmu/ifi/dbs/elki/index/tree/spatial/SpatialNode.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.index.tree.spatial;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.data.spatial.SpatialComparable;
import de.lmu.ifi.dbs.elki.index.tree.Node;
diff --git a/src/de/lmu/ifi/dbs/elki/index/tree/spatial/SpatialPair.java b/src/de/lmu/ifi/dbs/elki/index/tree/spatial/SpatialPair.java
index 93ca1c1f..57fb6932 100644
--- a/src/de/lmu/ifi/dbs/elki/index/tree/spatial/SpatialPair.java
+++ b/src/de/lmu/ifi/dbs/elki/index/tree/spatial/SpatialPair.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.index.tree.spatial;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.data.spatial.SpatialComparable;
import de.lmu.ifi.dbs.elki.utilities.pairs.Pair;
diff --git a/src/de/lmu/ifi/dbs/elki/index/tree/spatial/SpatialPointLeafEntry.java b/src/de/lmu/ifi/dbs/elki/index/tree/spatial/SpatialPointLeafEntry.java
index 6492545b..c3cd20d3 100644
--- a/src/de/lmu/ifi/dbs/elki/index/tree/spatial/SpatialPointLeafEntry.java
+++ b/src/de/lmu/ifi/dbs/elki/index/tree/spatial/SpatialPointLeafEntry.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.index.tree.spatial;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.io.IOException;
import java.io.ObjectInput;
diff --git a/src/de/lmu/ifi/dbs/elki/index/tree/spatial/rstarvariants/AbstractRStarTree.java b/src/de/lmu/ifi/dbs/elki/index/tree/spatial/rstarvariants/AbstractRStarTree.java
index a355878c..9e76b474 100644
--- a/src/de/lmu/ifi/dbs/elki/index/tree/spatial/rstarvariants/AbstractRStarTree.java
+++ b/src/de/lmu/ifi/dbs/elki/index/tree/spatial/rstarvariants/AbstractRStarTree.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.index.tree.spatial.rstarvariants;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.io.ByteArrayOutputStream;
import java.io.IOException;
diff --git a/src/de/lmu/ifi/dbs/elki/index/tree/spatial/rstarvariants/AbstractRStarTreeFactory.java b/src/de/lmu/ifi/dbs/elki/index/tree/spatial/rstarvariants/AbstractRStarTreeFactory.java
index d1e47725..5a0b9975 100644
--- a/src/de/lmu/ifi/dbs/elki/index/tree/spatial/rstarvariants/AbstractRStarTreeFactory.java
+++ b/src/de/lmu/ifi/dbs/elki/index/tree/spatial/rstarvariants/AbstractRStarTreeFactory.java
@@ -1,32 +1,34 @@
package de.lmu.ifi.dbs.elki.index.tree.spatial.rstarvariants;
-/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.data.NumberVector;
import de.lmu.ifi.dbs.elki.data.type.TypeInformation;
import de.lmu.ifi.dbs.elki.data.type.TypeUtil;
import de.lmu.ifi.dbs.elki.index.Index;
import de.lmu.ifi.dbs.elki.index.tree.TreeIndexFactory;
+import de.lmu.ifi.dbs.elki.index.tree.spatial.SpatialEntry;
import de.lmu.ifi.dbs.elki.index.tree.spatial.rstarvariants.bulk.BulkSplit;
import de.lmu.ifi.dbs.elki.index.tree.spatial.rstarvariants.util.InsertionStrategy;
import de.lmu.ifi.dbs.elki.index.tree.spatial.rstarvariants.util.LeastOverlapInsertionStrategy;
@@ -44,9 +46,11 @@ import de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters.ObjectParameter;
* @apiviz.uses AbstractRStarTree oneway - - «create»
*
* @param <O> Object type
+ * @param <N> Node type
+ * @param <E> Entry type
* @param <I> Index type
*/
-public abstract class AbstractRStarTreeFactory<O extends NumberVector<O, ?>, I extends AbstractRStarTree<?, ?> & Index> extends TreeIndexFactory<O, I> {
+public abstract class AbstractRStarTreeFactory<O extends NumberVector<O, ?>, N extends AbstractRStarTreeNode<N, E>, E extends SpatialEntry, I extends AbstractRStarTree<N, E> & Index> extends TreeIndexFactory<O, I> {
/**
* Fast-insertion parameter. Optional.
*/
@@ -122,6 +126,6 @@ public abstract class AbstractRStarTreeFactory<O extends NumberVector<O, ?>, I e
}
@Override
- protected abstract AbstractRStarTreeFactory<O, ?> makeInstance();
+ protected abstract AbstractRStarTreeFactory<O, ?, ?, ?> makeInstance();
}
} \ No newline at end of file
diff --git a/src/de/lmu/ifi/dbs/elki/index/tree/spatial/rstarvariants/AbstractRStarTreeNode.java b/src/de/lmu/ifi/dbs/elki/index/tree/spatial/rstarvariants/AbstractRStarTreeNode.java
index fad083a0..330d5aa7 100644
--- a/src/de/lmu/ifi/dbs/elki/index/tree/spatial/rstarvariants/AbstractRStarTreeNode.java
+++ b/src/de/lmu/ifi/dbs/elki/index/tree/spatial/rstarvariants/AbstractRStarTreeNode.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.index.tree.spatial.rstarvariants;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.io.IOException;
import java.io.ObjectInput;
diff --git a/src/de/lmu/ifi/dbs/elki/index/tree/spatial/rstarvariants/NonFlatRStarTree.java b/src/de/lmu/ifi/dbs/elki/index/tree/spatial/rstarvariants/NonFlatRStarTree.java
index 18768c91..20ae3826 100644
--- a/src/de/lmu/ifi/dbs/elki/index/tree/spatial/rstarvariants/NonFlatRStarTree.java
+++ b/src/de/lmu/ifi/dbs/elki/index/tree/spatial/rstarvariants/NonFlatRStarTree.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.index.tree.spatial.rstarvariants;
-/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.ArrayList;
import java.util.List;
@@ -109,7 +110,7 @@ public abstract class NonFlatRStarTree<N extends AbstractRStarTreeNode<N, E>, E
}
@Override
- protected void createEmptyRoot(@SuppressWarnings("unused") E exampleLeaf) {
+ protected void createEmptyRoot(E exampleLeaf) {
N root = createNewLeafNode();
writeNode(root);
setHeight(1);
diff --git a/src/de/lmu/ifi/dbs/elki/index/tree/spatial/rstarvariants/bulk/AbstractBulkSplit.java b/src/de/lmu/ifi/dbs/elki/index/tree/spatial/rstarvariants/bulk/AbstractBulkSplit.java
index 5aae5f04..999fa019 100644
--- a/src/de/lmu/ifi/dbs/elki/index/tree/spatial/rstarvariants/bulk/AbstractBulkSplit.java
+++ b/src/de/lmu/ifi/dbs/elki/index/tree/spatial/rstarvariants/bulk/AbstractBulkSplit.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.index.tree.spatial.rstarvariants.bulk;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.utilities.optionhandling.Parameterizable;
diff --git a/src/de/lmu/ifi/dbs/elki/index/tree/spatial/rstarvariants/bulk/BulkSplit.java b/src/de/lmu/ifi/dbs/elki/index/tree/spatial/rstarvariants/bulk/BulkSplit.java
index 85406f76..23c0f077 100644
--- a/src/de/lmu/ifi/dbs/elki/index/tree/spatial/rstarvariants/bulk/BulkSplit.java
+++ b/src/de/lmu/ifi/dbs/elki/index/tree/spatial/rstarvariants/bulk/BulkSplit.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.index.tree.spatial.rstarvariants.bulk;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.List;
diff --git a/src/de/lmu/ifi/dbs/elki/index/tree/spatial/rstarvariants/bulk/MaxExtensionBulkSplit.java b/src/de/lmu/ifi/dbs/elki/index/tree/spatial/rstarvariants/bulk/MaxExtensionBulkSplit.java
index d013d02f..0a830aab 100644
--- a/src/de/lmu/ifi/dbs/elki/index/tree/spatial/rstarvariants/bulk/MaxExtensionBulkSplit.java
+++ b/src/de/lmu/ifi/dbs/elki/index/tree/spatial/rstarvariants/bulk/MaxExtensionBulkSplit.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.index.tree.spatial.rstarvariants.bulk;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.ArrayList;
import java.util.Arrays;
diff --git a/src/de/lmu/ifi/dbs/elki/index/tree/spatial/rstarvariants/bulk/ZCurveBulkSplit.java b/src/de/lmu/ifi/dbs/elki/index/tree/spatial/rstarvariants/bulk/ZCurveBulkSplit.java
index 425818a3..61e07960 100644
--- a/src/de/lmu/ifi/dbs/elki/index/tree/spatial/rstarvariants/bulk/ZCurveBulkSplit.java
+++ b/src/de/lmu/ifi/dbs/elki/index/tree/spatial/rstarvariants/bulk/ZCurveBulkSplit.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.index.tree.spatial.rstarvariants.bulk;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.ArrayList;
import java.util.Collections;
diff --git a/src/de/lmu/ifi/dbs/elki/index/tree/spatial/rstarvariants/deliclu/DeLiCluDirectoryEntry.java b/src/de/lmu/ifi/dbs/elki/index/tree/spatial/rstarvariants/deliclu/DeLiCluDirectoryEntry.java
index e6b643d4..a620ff62 100644
--- a/src/de/lmu/ifi/dbs/elki/index/tree/spatial/rstarvariants/deliclu/DeLiCluDirectoryEntry.java
+++ b/src/de/lmu/ifi/dbs/elki/index/tree/spatial/rstarvariants/deliclu/DeLiCluDirectoryEntry.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.index.tree.spatial.rstarvariants.deliclu;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.data.HyperBoundingBox;
import de.lmu.ifi.dbs.elki.index.tree.spatial.SpatialDirectoryEntry;
diff --git a/src/de/lmu/ifi/dbs/elki/index/tree/spatial/rstarvariants/deliclu/DeLiCluEntry.java b/src/de/lmu/ifi/dbs/elki/index/tree/spatial/rstarvariants/deliclu/DeLiCluEntry.java
index 20b4490c..3dbde624 100644
--- a/src/de/lmu/ifi/dbs/elki/index/tree/spatial/rstarvariants/deliclu/DeLiCluEntry.java
+++ b/src/de/lmu/ifi/dbs/elki/index/tree/spatial/rstarvariants/deliclu/DeLiCluEntry.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.index.tree.spatial.rstarvariants.deliclu;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.index.tree.spatial.SpatialEntry;
diff --git a/src/de/lmu/ifi/dbs/elki/index/tree/spatial/rstarvariants/deliclu/DeLiCluLeafEntry.java b/src/de/lmu/ifi/dbs/elki/index/tree/spatial/rstarvariants/deliclu/DeLiCluLeafEntry.java
index 578e23e9..b2ec9f9a 100644
--- a/src/de/lmu/ifi/dbs/elki/index/tree/spatial/rstarvariants/deliclu/DeLiCluLeafEntry.java
+++ b/src/de/lmu/ifi/dbs/elki/index/tree/spatial/rstarvariants/deliclu/DeLiCluLeafEntry.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.index.tree.spatial.rstarvariants.deliclu;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.data.NumberVector;
import de.lmu.ifi.dbs.elki.database.ids.DBID;
diff --git a/src/de/lmu/ifi/dbs/elki/index/tree/spatial/rstarvariants/deliclu/DeLiCluNode.java b/src/de/lmu/ifi/dbs/elki/index/tree/spatial/rstarvariants/deliclu/DeLiCluNode.java
index f1cee706..689507cb 100644
--- a/src/de/lmu/ifi/dbs/elki/index/tree/spatial/rstarvariants/deliclu/DeLiCluNode.java
+++ b/src/de/lmu/ifi/dbs/elki/index/tree/spatial/rstarvariants/deliclu/DeLiCluNode.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.index.tree.spatial.rstarvariants.deliclu;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.index.tree.spatial.rstarvariants.AbstractRStarTreeNode;
diff --git a/src/de/lmu/ifi/dbs/elki/index/tree/spatial/rstarvariants/deliclu/DeLiCluTree.java b/src/de/lmu/ifi/dbs/elki/index/tree/spatial/rstarvariants/deliclu/DeLiCluTree.java
index b4ac7a34..ac873815 100644
--- a/src/de/lmu/ifi/dbs/elki/index/tree/spatial/rstarvariants/deliclu/DeLiCluTree.java
+++ b/src/de/lmu/ifi/dbs/elki/index/tree/spatial/rstarvariants/deliclu/DeLiCluTree.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.index.tree.spatial.rstarvariants.deliclu;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.HashMap;
import java.util.HashSet;
diff --git a/src/de/lmu/ifi/dbs/elki/index/tree/spatial/rstarvariants/deliclu/DeLiCluTreeFactory.java b/src/de/lmu/ifi/dbs/elki/index/tree/spatial/rstarvariants/deliclu/DeLiCluTreeFactory.java
index d49251e0..dd9532a2 100644
--- a/src/de/lmu/ifi/dbs/elki/index/tree/spatial/rstarvariants/deliclu/DeLiCluTreeFactory.java
+++ b/src/de/lmu/ifi/dbs/elki/index/tree/spatial/rstarvariants/deliclu/DeLiCluTreeFactory.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.index.tree.spatial.rstarvariants.deliclu;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.data.NumberVector;
import de.lmu.ifi.dbs.elki.database.relation.Relation;
@@ -39,7 +40,7 @@ import de.lmu.ifi.dbs.elki.persistent.PageFile;
*
* @param <O> Object type
*/
-public class DeLiCluTreeFactory<O extends NumberVector<O, ?>> extends AbstractRStarTreeFactory<O, DeLiCluTreeIndex<O>> {
+public class DeLiCluTreeFactory<O extends NumberVector<O, ?>> extends AbstractRStarTreeFactory<O, DeLiCluNode, DeLiCluEntry, DeLiCluTreeIndex<O>> {
/**
* Constructor.
*
diff --git a/src/de/lmu/ifi/dbs/elki/index/tree/spatial/rstarvariants/deliclu/DeLiCluTreeIndex.java b/src/de/lmu/ifi/dbs/elki/index/tree/spatial/rstarvariants/deliclu/DeLiCluTreeIndex.java
index f436a3c3..9bf6be8f 100644
--- a/src/de/lmu/ifi/dbs/elki/index/tree/spatial/rstarvariants/deliclu/DeLiCluTreeIndex.java
+++ b/src/de/lmu/ifi/dbs/elki/index/tree/spatial/rstarvariants/deliclu/DeLiCluTreeIndex.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.index.tree.spatial.rstarvariants.deliclu;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.ArrayList;
import java.util.List;
diff --git a/src/de/lmu/ifi/dbs/elki/index/tree/spatial/rstarvariants/query/DoubleDistanceRStarTreeKNNQuery.java b/src/de/lmu/ifi/dbs/elki/index/tree/spatial/rstarvariants/query/DoubleDistanceRStarTreeKNNQuery.java
index dfb363a9..7d39c08f 100644
--- a/src/de/lmu/ifi/dbs/elki/index/tree/spatial/rstarvariants/query/DoubleDistanceRStarTreeKNNQuery.java
+++ b/src/de/lmu/ifi/dbs/elki/index/tree/spatial/rstarvariants/query/DoubleDistanceRStarTreeKNNQuery.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.index.tree.spatial.rstarvariants.query;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.ArrayList;
import java.util.Collections;
diff --git a/src/de/lmu/ifi/dbs/elki/index/tree/spatial/rstarvariants/query/DoubleDistanceRStarTreeRangeQuery.java b/src/de/lmu/ifi/dbs/elki/index/tree/spatial/rstarvariants/query/DoubleDistanceRStarTreeRangeQuery.java
index 4862143d..96d1e8c5 100644
--- a/src/de/lmu/ifi/dbs/elki/index/tree/spatial/rstarvariants/query/DoubleDistanceRStarTreeRangeQuery.java
+++ b/src/de/lmu/ifi/dbs/elki/index/tree/spatial/rstarvariants/query/DoubleDistanceRStarTreeRangeQuery.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.index.tree.spatial.rstarvariants.query;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.ArrayList;
import java.util.Collections;
diff --git a/src/de/lmu/ifi/dbs/elki/index/tree/spatial/rstarvariants/query/GenericRStarTreeKNNQuery.java b/src/de/lmu/ifi/dbs/elki/index/tree/spatial/rstarvariants/query/GenericRStarTreeKNNQuery.java
index eb2d08bb..be3ed994 100644
--- a/src/de/lmu/ifi/dbs/elki/index/tree/spatial/rstarvariants/query/GenericRStarTreeKNNQuery.java
+++ b/src/de/lmu/ifi/dbs/elki/index/tree/spatial/rstarvariants/query/GenericRStarTreeKNNQuery.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.index.tree.spatial.rstarvariants.query;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.ArrayList;
import java.util.Collections;
diff --git a/src/de/lmu/ifi/dbs/elki/index/tree/spatial/rstarvariants/query/GenericRStarTreeRangeQuery.java b/src/de/lmu/ifi/dbs/elki/index/tree/spatial/rstarvariants/query/GenericRStarTreeRangeQuery.java
index ebc11ebc..c4d68828 100644
--- a/src/de/lmu/ifi/dbs/elki/index/tree/spatial/rstarvariants/query/GenericRStarTreeRangeQuery.java
+++ b/src/de/lmu/ifi/dbs/elki/index/tree/spatial/rstarvariants/query/GenericRStarTreeRangeQuery.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.index.tree.spatial.rstarvariants.query;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.ArrayList;
import java.util.Collections;
diff --git a/src/de/lmu/ifi/dbs/elki/index/tree/spatial/rstarvariants/query/RStarTreeUtil.java b/src/de/lmu/ifi/dbs/elki/index/tree/spatial/rstarvariants/query/RStarTreeUtil.java
index d9af2d19..8e4b36e6 100644
--- a/src/de/lmu/ifi/dbs/elki/index/tree/spatial/rstarvariants/query/RStarTreeUtil.java
+++ b/src/de/lmu/ifi/dbs/elki/index/tree/spatial/rstarvariants/query/RStarTreeUtil.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.index.tree.spatial.rstarvariants.query;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.data.spatial.SpatialComparable;
import de.lmu.ifi.dbs.elki.database.query.distance.DistanceQuery;
diff --git a/src/de/lmu/ifi/dbs/elki/index/tree/spatial/rstarvariants/rstar/RStarTree.java b/src/de/lmu/ifi/dbs/elki/index/tree/spatial/rstarvariants/rstar/RStarTree.java
index 6078c794..4d208e46 100644
--- a/src/de/lmu/ifi/dbs/elki/index/tree/spatial/rstarvariants/rstar/RStarTree.java
+++ b/src/de/lmu/ifi/dbs/elki/index/tree/spatial/rstarvariants/rstar/RStarTree.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.index.tree.spatial.rstarvariants.rstar;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.index.tree.spatial.SpatialDirectoryEntry;
import de.lmu.ifi.dbs.elki.index.tree.spatial.SpatialEntry;
diff --git a/src/de/lmu/ifi/dbs/elki/index/tree/spatial/rstarvariants/rstar/RStarTreeFactory.java b/src/de/lmu/ifi/dbs/elki/index/tree/spatial/rstarvariants/rstar/RStarTreeFactory.java
index 465ead8b..f8da714c 100644
--- a/src/de/lmu/ifi/dbs/elki/index/tree/spatial/rstarvariants/rstar/RStarTreeFactory.java
+++ b/src/de/lmu/ifi/dbs/elki/index/tree/spatial/rstarvariants/rstar/RStarTreeFactory.java
@@ -1,29 +1,31 @@
package de.lmu.ifi.dbs.elki.index.tree.spatial.rstarvariants.rstar;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.data.NumberVector;
import de.lmu.ifi.dbs.elki.database.relation.Relation;
+import de.lmu.ifi.dbs.elki.index.tree.spatial.SpatialEntry;
import de.lmu.ifi.dbs.elki.index.tree.spatial.rstarvariants.AbstractRStarTreeFactory;
import de.lmu.ifi.dbs.elki.index.tree.spatial.rstarvariants.bulk.BulkSplit;
import de.lmu.ifi.dbs.elki.index.tree.spatial.rstarvariants.util.InsertionStrategy;
@@ -39,7 +41,7 @@ import de.lmu.ifi.dbs.elki.persistent.PageFile;
*
* @param <O> Object type
*/
-public class RStarTreeFactory<O extends NumberVector<O, ?>> extends AbstractRStarTreeFactory<O, RStarTreeIndex<O>> {
+public class RStarTreeFactory<O extends NumberVector<O, ?>> extends AbstractRStarTreeFactory<O, RStarTreeNode, SpatialEntry, RStarTreeIndex<O>> {
/**
* Constructor.
*
diff --git a/src/de/lmu/ifi/dbs/elki/index/tree/spatial/rstarvariants/rstar/RStarTreeIndex.java b/src/de/lmu/ifi/dbs/elki/index/tree/spatial/rstarvariants/rstar/RStarTreeIndex.java
index 55326db1..30286ca9 100644
--- a/src/de/lmu/ifi/dbs/elki/index/tree/spatial/rstarvariants/rstar/RStarTreeIndex.java
+++ b/src/de/lmu/ifi/dbs/elki/index/tree/spatial/rstarvariants/rstar/RStarTreeIndex.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.index.tree.spatial.rstarvariants.rstar;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.ArrayList;
import java.util.List;
diff --git a/src/de/lmu/ifi/dbs/elki/index/tree/spatial/rstarvariants/rstar/RStarTreeNode.java b/src/de/lmu/ifi/dbs/elki/index/tree/spatial/rstarvariants/rstar/RStarTreeNode.java
index cf54c207..248ddfc5 100644
--- a/src/de/lmu/ifi/dbs/elki/index/tree/spatial/rstarvariants/rstar/RStarTreeNode.java
+++ b/src/de/lmu/ifi/dbs/elki/index/tree/spatial/rstarvariants/rstar/RStarTreeNode.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.index.tree.spatial.rstarvariants.rstar;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.index.tree.spatial.SpatialEntry;
import de.lmu.ifi.dbs.elki.index.tree.spatial.rstarvariants.AbstractRStarTreeNode;
diff --git a/src/de/lmu/ifi/dbs/elki/index/tree/spatial/rstarvariants/util/ApproximateLeastOverlapInsertionStrategy.java b/src/de/lmu/ifi/dbs/elki/index/tree/spatial/rstarvariants/util/ApproximateLeastOverlapInsertionStrategy.java
index 5955bdae..1e9afdca 100644
--- a/src/de/lmu/ifi/dbs/elki/index/tree/spatial/rstarvariants/util/ApproximateLeastOverlapInsertionStrategy.java
+++ b/src/de/lmu/ifi/dbs/elki/index/tree/spatial/rstarvariants/util/ApproximateLeastOverlapInsertionStrategy.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.index.tree.spatial.rstarvariants.util;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.Collections;
diff --git a/src/de/lmu/ifi/dbs/elki/index/tree/spatial/rstarvariants/util/Enlargement.java b/src/de/lmu/ifi/dbs/elki/index/tree/spatial/rstarvariants/util/Enlargement.java
index 0e5c00ba..79c8c0ef 100644
--- a/src/de/lmu/ifi/dbs/elki/index/tree/spatial/rstarvariants/util/Enlargement.java
+++ b/src/de/lmu/ifi/dbs/elki/index/tree/spatial/rstarvariants/util/Enlargement.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.index.tree.spatial.rstarvariants.util;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.index.tree.DirectoryEntry;
import de.lmu.ifi.dbs.elki.index.tree.TreeIndexPathComponent;
diff --git a/src/de/lmu/ifi/dbs/elki/index/tree/spatial/rstarvariants/util/InsertionStrategy.java b/src/de/lmu/ifi/dbs/elki/index/tree/spatial/rstarvariants/util/InsertionStrategy.java
index b800e7bc..32f841b9 100644
--- a/src/de/lmu/ifi/dbs/elki/index/tree/spatial/rstarvariants/util/InsertionStrategy.java
+++ b/src/de/lmu/ifi/dbs/elki/index/tree/spatial/rstarvariants/util/InsertionStrategy.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.index.tree.spatial.rstarvariants.util;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.data.spatial.SpatialComparable;
import de.lmu.ifi.dbs.elki.index.tree.Node;
diff --git a/src/de/lmu/ifi/dbs/elki/index/tree/spatial/rstarvariants/util/LeastOverlapInsertionStrategy.java b/src/de/lmu/ifi/dbs/elki/index/tree/spatial/rstarvariants/util/LeastOverlapInsertionStrategy.java
index e57ebe3c..90f0c91b 100644
--- a/src/de/lmu/ifi/dbs/elki/index/tree/spatial/rstarvariants/util/LeastOverlapInsertionStrategy.java
+++ b/src/de/lmu/ifi/dbs/elki/index/tree/spatial/rstarvariants/util/LeastOverlapInsertionStrategy.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.index.tree.spatial.rstarvariants.util;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.data.HyperBoundingBox;
import de.lmu.ifi.dbs.elki.data.spatial.SpatialComparable;
diff --git a/src/de/lmu/ifi/dbs/elki/index/tree/spatial/rstarvariants/util/SpatialComparator.java b/src/de/lmu/ifi/dbs/elki/index/tree/spatial/rstarvariants/util/SpatialComparator.java
index 9f76cf13..fe3f322b 100644
--- a/src/de/lmu/ifi/dbs/elki/index/tree/spatial/rstarvariants/util/SpatialComparator.java
+++ b/src/de/lmu/ifi/dbs/elki/index/tree/spatial/rstarvariants/util/SpatialComparator.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.index.tree.spatial.rstarvariants.util;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.Comparator;
diff --git a/src/de/lmu/ifi/dbs/elki/index/tree/spatial/rstarvariants/util/SplitStrategy.java b/src/de/lmu/ifi/dbs/elki/index/tree/spatial/rstarvariants/util/SplitStrategy.java
index 295490f7..272dcbc6 100644
--- a/src/de/lmu/ifi/dbs/elki/index/tree/spatial/rstarvariants/util/SplitStrategy.java
+++ b/src/de/lmu/ifi/dbs/elki/index/tree/spatial/rstarvariants/util/SplitStrategy.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.index.tree.spatial.rstarvariants.util;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.List;
diff --git a/src/de/lmu/ifi/dbs/elki/index/tree/spatial/rstarvariants/util/TopologicalSplitter.java b/src/de/lmu/ifi/dbs/elki/index/tree/spatial/rstarvariants/util/TopologicalSplitter.java
index 9eb07107..011e56ab 100644
--- a/src/de/lmu/ifi/dbs/elki/index/tree/spatial/rstarvariants/util/TopologicalSplitter.java
+++ b/src/de/lmu/ifi/dbs/elki/index/tree/spatial/rstarvariants/util/TopologicalSplitter.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.index.tree.spatial.rstarvariants.util;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.ArrayList;
import java.util.Collections;
diff --git a/src/de/lmu/ifi/dbs/elki/logging/CLISmartHandler.java b/src/de/lmu/ifi/dbs/elki/logging/CLISmartHandler.java
index 2d229cdc..c425e5fb 100644
--- a/src/de/lmu/ifi/dbs/elki/logging/CLISmartHandler.java
+++ b/src/de/lmu/ifi/dbs/elki/logging/CLISmartHandler.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.logging;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.io.OutputStream;
import java.io.Writer;
diff --git a/src/de/lmu/ifi/dbs/elki/logging/ELKILogRecord.java b/src/de/lmu/ifi/dbs/elki/logging/ELKILogRecord.java
index c87fe7f5..211b788b 100644
--- a/src/de/lmu/ifi/dbs/elki/logging/ELKILogRecord.java
+++ b/src/de/lmu/ifi/dbs/elki/logging/ELKILogRecord.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.logging;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.logging.Level;
import java.util.logging.LogRecord;
diff --git a/src/de/lmu/ifi/dbs/elki/logging/Logging.java b/src/de/lmu/ifi/dbs/elki/logging/Logging.java
index e7db7dae..a2d43bbc 100644
--- a/src/de/lmu/ifi/dbs/elki/logging/Logging.java
+++ b/src/de/lmu/ifi/dbs/elki/logging/Logging.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.logging;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.HashMap;
import java.util.logging.Level;
diff --git a/src/de/lmu/ifi/dbs/elki/logging/LoggingConfiguration.java b/src/de/lmu/ifi/dbs/elki/logging/LoggingConfiguration.java
index b5848b41..2d191f7c 100644
--- a/src/de/lmu/ifi/dbs/elki/logging/LoggingConfiguration.java
+++ b/src/de/lmu/ifi/dbs/elki/logging/LoggingConfiguration.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.logging;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.io.File;
import java.io.FileNotFoundException;
diff --git a/src/de/lmu/ifi/dbs/elki/logging/LoggingUtil.java b/src/de/lmu/ifi/dbs/elki/logging/LoggingUtil.java
index 1ae437ee..a9413eab 100644
--- a/src/de/lmu/ifi/dbs/elki/logging/LoggingUtil.java
+++ b/src/de/lmu/ifi/dbs/elki/logging/LoggingUtil.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.logging;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.logging.Level;
import java.util.logging.LogRecord;
diff --git a/src/de/lmu/ifi/dbs/elki/logging/MessageFormatter.java b/src/de/lmu/ifi/dbs/elki/logging/MessageFormatter.java
index 027f7377..5ea5c489 100644
--- a/src/de/lmu/ifi/dbs/elki/logging/MessageFormatter.java
+++ b/src/de/lmu/ifi/dbs/elki/logging/MessageFormatter.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.logging;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.logging.Formatter;
import java.util.logging.LogRecord;
diff --git a/src/de/lmu/ifi/dbs/elki/logging/OutputStreamLogger.java b/src/de/lmu/ifi/dbs/elki/logging/OutputStreamLogger.java
index c4c17743..6d8a23f5 100644
--- a/src/de/lmu/ifi/dbs/elki/logging/OutputStreamLogger.java
+++ b/src/de/lmu/ifi/dbs/elki/logging/OutputStreamLogger.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.logging;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.io.IOException;
import java.io.OutputStream;
diff --git a/src/de/lmu/ifi/dbs/elki/logging/progress/AbstractProgress.java b/src/de/lmu/ifi/dbs/elki/logging/progress/AbstractProgress.java
index 00163714..2fb6764e 100644
--- a/src/de/lmu/ifi/dbs/elki/logging/progress/AbstractProgress.java
+++ b/src/de/lmu/ifi/dbs/elki/logging/progress/AbstractProgress.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.logging.progress;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.concurrent.atomic.AtomicInteger;
diff --git a/src/de/lmu/ifi/dbs/elki/logging/progress/FiniteProgress.java b/src/de/lmu/ifi/dbs/elki/logging/progress/FiniteProgress.java
index 50a5a121..4319255f 100644
--- a/src/de/lmu/ifi/dbs/elki/logging/progress/FiniteProgress.java
+++ b/src/de/lmu/ifi/dbs/elki/logging/progress/FiniteProgress.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.logging.progress;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.logging.Logging;
diff --git a/src/de/lmu/ifi/dbs/elki/logging/progress/IndefiniteProgress.java b/src/de/lmu/ifi/dbs/elki/logging/progress/IndefiniteProgress.java
index 09e2406b..404a990a 100644
--- a/src/de/lmu/ifi/dbs/elki/logging/progress/IndefiniteProgress.java
+++ b/src/de/lmu/ifi/dbs/elki/logging/progress/IndefiniteProgress.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.logging.progress;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.logging.Logging;
diff --git a/src/de/lmu/ifi/dbs/elki/logging/progress/Progress.java b/src/de/lmu/ifi/dbs/elki/logging/progress/Progress.java
index a1af7e30..092ec49c 100644
--- a/src/de/lmu/ifi/dbs/elki/logging/progress/Progress.java
+++ b/src/de/lmu/ifi/dbs/elki/logging/progress/Progress.java
@@ -1,26 +1,28 @@
package de.lmu.ifi.dbs.elki.logging.progress;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
+
/**
* Generic Progress logging interface.
diff --git a/src/de/lmu/ifi/dbs/elki/logging/progress/ProgressLogRecord.java b/src/de/lmu/ifi/dbs/elki/logging/progress/ProgressLogRecord.java
index dd4651db..8f54f75e 100644
--- a/src/de/lmu/ifi/dbs/elki/logging/progress/ProgressLogRecord.java
+++ b/src/de/lmu/ifi/dbs/elki/logging/progress/ProgressLogRecord.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.logging.progress;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.logging.Level;
diff --git a/src/de/lmu/ifi/dbs/elki/logging/progress/ProgressTracker.java b/src/de/lmu/ifi/dbs/elki/logging/progress/ProgressTracker.java
index 281a85a4..b7c125c9 100644
--- a/src/de/lmu/ifi/dbs/elki/logging/progress/ProgressTracker.java
+++ b/src/de/lmu/ifi/dbs/elki/logging/progress/ProgressTracker.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.logging.progress;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.lang.ref.WeakReference;
import java.util.ArrayList;
diff --git a/src/de/lmu/ifi/dbs/elki/logging/progress/StepProgress.java b/src/de/lmu/ifi/dbs/elki/logging/progress/StepProgress.java
index 09285e2b..b5eee462 100644
--- a/src/de/lmu/ifi/dbs/elki/logging/progress/StepProgress.java
+++ b/src/de/lmu/ifi/dbs/elki/logging/progress/StepProgress.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.logging.progress;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.logging.Logging;
diff --git a/src/de/lmu/ifi/dbs/elki/math/AggregatingHistogram.java b/src/de/lmu/ifi/dbs/elki/math/AggregatingHistogram.java
index b22f65a5..47919752 100644
--- a/src/de/lmu/ifi/dbs/elki/math/AggregatingHistogram.java
+++ b/src/de/lmu/ifi/dbs/elki/math/AggregatingHistogram.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.math;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.utilities.pairs.Pair;
diff --git a/src/de/lmu/ifi/dbs/elki/math/DoubleMinMax.java b/src/de/lmu/ifi/dbs/elki/math/DoubleMinMax.java
index 4c5c24b8..5c7d3d74 100644
--- a/src/de/lmu/ifi/dbs/elki/math/DoubleMinMax.java
+++ b/src/de/lmu/ifi/dbs/elki/math/DoubleMinMax.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.math;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.Collection;
diff --git a/src/de/lmu/ifi/dbs/elki/math/FlexiHistogram.java b/src/de/lmu/ifi/dbs/elki/math/FlexiHistogram.java
index 2518047a..9023a126 100644
--- a/src/de/lmu/ifi/dbs/elki/math/FlexiHistogram.java
+++ b/src/de/lmu/ifi/dbs/elki/math/FlexiHistogram.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.math;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.ArrayList;
import java.util.Iterator;
diff --git a/src/de/lmu/ifi/dbs/elki/math/MathUtil.java b/src/de/lmu/ifi/dbs/elki/math/MathUtil.java
index a3c6387d..f04fdef7 100644
--- a/src/de/lmu/ifi/dbs/elki/math/MathUtil.java
+++ b/src/de/lmu/ifi/dbs/elki/math/MathUtil.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.math;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.math.BigInteger;
import java.util.Random;
diff --git a/src/de/lmu/ifi/dbs/elki/math/Mean.java b/src/de/lmu/ifi/dbs/elki/math/Mean.java
index 400c9216..6f63c59e 100644
--- a/src/de/lmu/ifi/dbs/elki/math/Mean.java
+++ b/src/de/lmu/ifi/dbs/elki/math/Mean.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.math;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.utilities.documentation.Reference;
diff --git a/src/de/lmu/ifi/dbs/elki/math/MeanVariance.java b/src/de/lmu/ifi/dbs/elki/math/MeanVariance.java
index d846fb07..49f00856 100644
--- a/src/de/lmu/ifi/dbs/elki/math/MeanVariance.java
+++ b/src/de/lmu/ifi/dbs/elki/math/MeanVariance.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.math;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.utilities.documentation.Reference;
import de.lmu.ifi.dbs.elki.utilities.exceptions.AbortException;
diff --git a/src/de/lmu/ifi/dbs/elki/math/MinMax.java b/src/de/lmu/ifi/dbs/elki/math/MinMax.java
index 55632c00..e3dd9517 100644
--- a/src/de/lmu/ifi/dbs/elki/math/MinMax.java
+++ b/src/de/lmu/ifi/dbs/elki/math/MinMax.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.math;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.SortedSet;
diff --git a/src/de/lmu/ifi/dbs/elki/math/ReplacingHistogram.java b/src/de/lmu/ifi/dbs/elki/math/ReplacingHistogram.java
index 7b1b09b7..689fceec 100644
--- a/src/de/lmu/ifi/dbs/elki/math/ReplacingHistogram.java
+++ b/src/de/lmu/ifi/dbs/elki/math/ReplacingHistogram.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.math;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.ArrayList;
import java.util.Iterator;
diff --git a/src/de/lmu/ifi/dbs/elki/math/linearalgebra/AffineTransformation.java b/src/de/lmu/ifi/dbs/elki/math/linearalgebra/AffineTransformation.java
index 9deea281..6200164b 100644
--- a/src/de/lmu/ifi/dbs/elki/math/linearalgebra/AffineTransformation.java
+++ b/src/de/lmu/ifi/dbs/elki/math/linearalgebra/AffineTransformation.java
@@ -1,26 +1,28 @@
package de.lmu.ifi.dbs.elki.math.linearalgebra;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
+
/**
* Affine transformations implemented using homogeneous coordinates.
diff --git a/src/de/lmu/ifi/dbs/elki/math/linearalgebra/Centroid.java b/src/de/lmu/ifi/dbs/elki/math/linearalgebra/Centroid.java
index 76fe15d1..5ba3d4a6 100644
--- a/src/de/lmu/ifi/dbs/elki/math/linearalgebra/Centroid.java
+++ b/src/de/lmu/ifi/dbs/elki/math/linearalgebra/Centroid.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.math.linearalgebra;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.data.NumberVector;
import de.lmu.ifi.dbs.elki.database.ids.DBID;
diff --git a/src/de/lmu/ifi/dbs/elki/math/linearalgebra/CholeskyDecomposition.java b/src/de/lmu/ifi/dbs/elki/math/linearalgebra/CholeskyDecomposition.java
index c72b1245..ff3b8cfb 100644
--- a/src/de/lmu/ifi/dbs/elki/math/linearalgebra/CholeskyDecomposition.java
+++ b/src/de/lmu/ifi/dbs/elki/math/linearalgebra/CholeskyDecomposition.java
@@ -1,26 +1,28 @@
package de.lmu.ifi.dbs.elki.math.linearalgebra;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
+
/**
* Cholesky Decomposition.
diff --git a/src/de/lmu/ifi/dbs/elki/math/linearalgebra/CovarianceMatrix.java b/src/de/lmu/ifi/dbs/elki/math/linearalgebra/CovarianceMatrix.java
index 03b3c18d..24ea740b 100644
--- a/src/de/lmu/ifi/dbs/elki/math/linearalgebra/CovarianceMatrix.java
+++ b/src/de/lmu/ifi/dbs/elki/math/linearalgebra/CovarianceMatrix.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.math.linearalgebra;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.data.NumberVector;
import de.lmu.ifi.dbs.elki.database.ids.DBID;
diff --git a/src/de/lmu/ifi/dbs/elki/math/linearalgebra/EigenPair.java b/src/de/lmu/ifi/dbs/elki/math/linearalgebra/EigenPair.java
index 6ee04aa5..6b747dae 100644
--- a/src/de/lmu/ifi/dbs/elki/math/linearalgebra/EigenPair.java
+++ b/src/de/lmu/ifi/dbs/elki/math/linearalgebra/EigenPair.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.math.linearalgebra;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.utilities.FormatUtil;
diff --git a/src/de/lmu/ifi/dbs/elki/math/linearalgebra/EigenvalueDecomposition.java b/src/de/lmu/ifi/dbs/elki/math/linearalgebra/EigenvalueDecomposition.java
index 7c018ea0..67d77089 100644
--- a/src/de/lmu/ifi/dbs/elki/math/linearalgebra/EigenvalueDecomposition.java
+++ b/src/de/lmu/ifi/dbs/elki/math/linearalgebra/EigenvalueDecomposition.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.math.linearalgebra;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.math.MathUtil;
diff --git a/src/de/lmu/ifi/dbs/elki/math/linearalgebra/LUDecomposition.java b/src/de/lmu/ifi/dbs/elki/math/linearalgebra/LUDecomposition.java
index 07faa89d..5adafe10 100644
--- a/src/de/lmu/ifi/dbs/elki/math/linearalgebra/LUDecomposition.java
+++ b/src/de/lmu/ifi/dbs/elki/math/linearalgebra/LUDecomposition.java
@@ -1,26 +1,28 @@
package de.lmu.ifi.dbs.elki.math.linearalgebra;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
+
/**
* LU Decomposition.
diff --git a/src/de/lmu/ifi/dbs/elki/math/linearalgebra/LinearEquationSystem.java b/src/de/lmu/ifi/dbs/elki/math/linearalgebra/LinearEquationSystem.java
index fb3c7a00..decec2b6 100644
--- a/src/de/lmu/ifi/dbs/elki/math/linearalgebra/LinearEquationSystem.java
+++ b/src/de/lmu/ifi/dbs/elki/math/linearalgebra/LinearEquationSystem.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.math.linearalgebra;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.text.DecimalFormat;
import java.text.DecimalFormatSymbols;
diff --git a/src/de/lmu/ifi/dbs/elki/math/linearalgebra/Matrix.java b/src/de/lmu/ifi/dbs/elki/math/linearalgebra/Matrix.java
index 77556332..fefe7e16 100644
--- a/src/de/lmu/ifi/dbs/elki/math/linearalgebra/Matrix.java
+++ b/src/de/lmu/ifi/dbs/elki/math/linearalgebra/Matrix.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.math.linearalgebra;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.io.BufferedReader;
import java.io.Serializable;
diff --git a/src/de/lmu/ifi/dbs/elki/math/linearalgebra/MatrixLike.java b/src/de/lmu/ifi/dbs/elki/math/linearalgebra/MatrixLike.java
index aa783e1c..ff1ec5ba 100644
--- a/src/de/lmu/ifi/dbs/elki/math/linearalgebra/MatrixLike.java
+++ b/src/de/lmu/ifi/dbs/elki/math/linearalgebra/MatrixLike.java
@@ -1,26 +1,28 @@
package de.lmu.ifi.dbs.elki.math.linearalgebra;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
+
/**
* Common Interface for Matrix and Vector objects, where M is the actual type.
diff --git a/src/de/lmu/ifi/dbs/elki/math/linearalgebra/ProjectedCentroid.java b/src/de/lmu/ifi/dbs/elki/math/linearalgebra/ProjectedCentroid.java
index 7dc136e4..e54f75fe 100644
--- a/src/de/lmu/ifi/dbs/elki/math/linearalgebra/ProjectedCentroid.java
+++ b/src/de/lmu/ifi/dbs/elki/math/linearalgebra/ProjectedCentroid.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.math.linearalgebra;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.BitSet;
diff --git a/src/de/lmu/ifi/dbs/elki/math/linearalgebra/ProjectionResult.java b/src/de/lmu/ifi/dbs/elki/math/linearalgebra/ProjectionResult.java
index 286028e2..040bd4b1 100644
--- a/src/de/lmu/ifi/dbs/elki/math/linearalgebra/ProjectionResult.java
+++ b/src/de/lmu/ifi/dbs/elki/math/linearalgebra/ProjectionResult.java
@@ -1,26 +1,28 @@
package de.lmu.ifi.dbs.elki.math.linearalgebra;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
/**
* Interface representing a simple projection result.
diff --git a/src/de/lmu/ifi/dbs/elki/math/linearalgebra/QRDecomposition.java b/src/de/lmu/ifi/dbs/elki/math/linearalgebra/QRDecomposition.java
index 0d261678..c053de0d 100644
--- a/src/de/lmu/ifi/dbs/elki/math/linearalgebra/QRDecomposition.java
+++ b/src/de/lmu/ifi/dbs/elki/math/linearalgebra/QRDecomposition.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.math.linearalgebra;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.math.MathUtil;
diff --git a/src/de/lmu/ifi/dbs/elki/math/linearalgebra/SingularValueDecomposition.java b/src/de/lmu/ifi/dbs/elki/math/linearalgebra/SingularValueDecomposition.java
index 8a125b93..38d70443 100644
--- a/src/de/lmu/ifi/dbs/elki/math/linearalgebra/SingularValueDecomposition.java
+++ b/src/de/lmu/ifi/dbs/elki/math/linearalgebra/SingularValueDecomposition.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.math.linearalgebra;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.math.MathUtil;
diff --git a/src/de/lmu/ifi/dbs/elki/math/linearalgebra/SortedEigenPairs.java b/src/de/lmu/ifi/dbs/elki/math/linearalgebra/SortedEigenPairs.java
index be189978..b0264c35 100644
--- a/src/de/lmu/ifi/dbs/elki/math/linearalgebra/SortedEigenPairs.java
+++ b/src/de/lmu/ifi/dbs/elki/math/linearalgebra/SortedEigenPairs.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.math.linearalgebra;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.Arrays;
import java.util.Comparator;
diff --git a/src/de/lmu/ifi/dbs/elki/math/linearalgebra/SubspaceProjectionResult.java b/src/de/lmu/ifi/dbs/elki/math/linearalgebra/SubspaceProjectionResult.java
index 6716d8ec..3e8815e3 100644
--- a/src/de/lmu/ifi/dbs/elki/math/linearalgebra/SubspaceProjectionResult.java
+++ b/src/de/lmu/ifi/dbs/elki/math/linearalgebra/SubspaceProjectionResult.java
@@ -1,26 +1,28 @@
package de.lmu.ifi.dbs.elki.math.linearalgebra;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
/**
* Simple class wrapping the result of a subspace projection.
diff --git a/src/de/lmu/ifi/dbs/elki/math/linearalgebra/Vector.java b/src/de/lmu/ifi/dbs/elki/math/linearalgebra/Vector.java
index 159f91e0..8cf3cf78 100644
--- a/src/de/lmu/ifi/dbs/elki/math/linearalgebra/Vector.java
+++ b/src/de/lmu/ifi/dbs/elki/math/linearalgebra/Vector.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.math.linearalgebra;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.io.Serializable;
import java.util.Arrays;
diff --git a/src/de/lmu/ifi/dbs/elki/math/linearalgebra/fitting/FittingFunction.java b/src/de/lmu/ifi/dbs/elki/math/linearalgebra/fitting/FittingFunction.java
index c75ee71e..0cb67acc 100644
--- a/src/de/lmu/ifi/dbs/elki/math/linearalgebra/fitting/FittingFunction.java
+++ b/src/de/lmu/ifi/dbs/elki/math/linearalgebra/fitting/FittingFunction.java
@@ -1,26 +1,28 @@
package de.lmu.ifi.dbs.elki.math.linearalgebra.fitting;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
/**
* Interface for a function used in Levenberg-Marquard-Fitting
diff --git a/src/de/lmu/ifi/dbs/elki/math/linearalgebra/fitting/FittingFunctionResult.java b/src/de/lmu/ifi/dbs/elki/math/linearalgebra/fitting/FittingFunctionResult.java
index 0c4db5c1..46245349 100644
--- a/src/de/lmu/ifi/dbs/elki/math/linearalgebra/fitting/FittingFunctionResult.java
+++ b/src/de/lmu/ifi/dbs/elki/math/linearalgebra/fitting/FittingFunctionResult.java
@@ -1,26 +1,28 @@
package de.lmu.ifi.dbs.elki.math.linearalgebra.fitting;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
/**
* Result returned by a fitting function.
diff --git a/src/de/lmu/ifi/dbs/elki/math/linearalgebra/fitting/GaussianFittingFunction.java b/src/de/lmu/ifi/dbs/elki/math/linearalgebra/fitting/GaussianFittingFunction.java
index 9edcd116..327b92b4 100644
--- a/src/de/lmu/ifi/dbs/elki/math/linearalgebra/fitting/GaussianFittingFunction.java
+++ b/src/de/lmu/ifi/dbs/elki/math/linearalgebra/fitting/GaussianFittingFunction.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.math.linearalgebra.fitting;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.math.MathUtil;
diff --git a/src/de/lmu/ifi/dbs/elki/math/linearalgebra/fitting/LevenbergMarquardtMethod.java b/src/de/lmu/ifi/dbs/elki/math/linearalgebra/fitting/LevenbergMarquardtMethod.java
index 3822c67b..8b8253dc 100644
--- a/src/de/lmu/ifi/dbs/elki/math/linearalgebra/fitting/LevenbergMarquardtMethod.java
+++ b/src/de/lmu/ifi/dbs/elki/math/linearalgebra/fitting/LevenbergMarquardtMethod.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.math.linearalgebra.fitting;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.math.linearalgebra.LinearEquationSystem;
diff --git a/src/de/lmu/ifi/dbs/elki/math/linearalgebra/pca/AbstractCovarianceMatrixBuilder.java b/src/de/lmu/ifi/dbs/elki/math/linearalgebra/pca/AbstractCovarianceMatrixBuilder.java
index 3066b87d..197ad939 100644
--- a/src/de/lmu/ifi/dbs/elki/math/linearalgebra/pca/AbstractCovarianceMatrixBuilder.java
+++ b/src/de/lmu/ifi/dbs/elki/math/linearalgebra/pca/AbstractCovarianceMatrixBuilder.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.math.linearalgebra.pca;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.Collection;
import java.util.Iterator;
diff --git a/src/de/lmu/ifi/dbs/elki/math/linearalgebra/pca/CompositeEigenPairFilter.java b/src/de/lmu/ifi/dbs/elki/math/linearalgebra/pca/CompositeEigenPairFilter.java
index eb42d654..112a6df4 100644
--- a/src/de/lmu/ifi/dbs/elki/math/linearalgebra/pca/CompositeEigenPairFilter.java
+++ b/src/de/lmu/ifi/dbs/elki/math/linearalgebra/pca/CompositeEigenPairFilter.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.math.linearalgebra.pca;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.List;
diff --git a/src/de/lmu/ifi/dbs/elki/math/linearalgebra/pca/CovarianceMatrixBuilder.java b/src/de/lmu/ifi/dbs/elki/math/linearalgebra/pca/CovarianceMatrixBuilder.java
index 668974e9..7416abce 100644
--- a/src/de/lmu/ifi/dbs/elki/math/linearalgebra/pca/CovarianceMatrixBuilder.java
+++ b/src/de/lmu/ifi/dbs/elki/math/linearalgebra/pca/CovarianceMatrixBuilder.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.math.linearalgebra.pca;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.Collection;
diff --git a/src/de/lmu/ifi/dbs/elki/math/linearalgebra/pca/EigenPairFilter.java b/src/de/lmu/ifi/dbs/elki/math/linearalgebra/pca/EigenPairFilter.java
index a616cdf0..3c9d8603 100644
--- a/src/de/lmu/ifi/dbs/elki/math/linearalgebra/pca/EigenPairFilter.java
+++ b/src/de/lmu/ifi/dbs/elki/math/linearalgebra/pca/EigenPairFilter.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.math.linearalgebra.pca;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.math.linearalgebra.SortedEigenPairs;
import de.lmu.ifi.dbs.elki.utilities.optionhandling.Parameterizable;
diff --git a/src/de/lmu/ifi/dbs/elki/math/linearalgebra/pca/FilteredEigenPairs.java b/src/de/lmu/ifi/dbs/elki/math/linearalgebra/pca/FilteredEigenPairs.java
index 787732f4..9fdac000 100644
--- a/src/de/lmu/ifi/dbs/elki/math/linearalgebra/pca/FilteredEigenPairs.java
+++ b/src/de/lmu/ifi/dbs/elki/math/linearalgebra/pca/FilteredEigenPairs.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.math.linearalgebra.pca;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.math.linearalgebra.EigenPair;
diff --git a/src/de/lmu/ifi/dbs/elki/math/linearalgebra/pca/FirstNEigenPairFilter.java b/src/de/lmu/ifi/dbs/elki/math/linearalgebra/pca/FirstNEigenPairFilter.java
index 40ca5047..c4839109 100644
--- a/src/de/lmu/ifi/dbs/elki/math/linearalgebra/pca/FirstNEigenPairFilter.java
+++ b/src/de/lmu/ifi/dbs/elki/math/linearalgebra/pca/FirstNEigenPairFilter.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.math.linearalgebra.pca;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.ArrayList;
import java.util.List;
diff --git a/src/de/lmu/ifi/dbs/elki/math/linearalgebra/pca/LimitEigenPairFilter.java b/src/de/lmu/ifi/dbs/elki/math/linearalgebra/pca/LimitEigenPairFilter.java
index 338c6ba6..c1edb99a 100644
--- a/src/de/lmu/ifi/dbs/elki/math/linearalgebra/pca/LimitEigenPairFilter.java
+++ b/src/de/lmu/ifi/dbs/elki/math/linearalgebra/pca/LimitEigenPairFilter.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.math.linearalgebra.pca;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.ArrayList;
import java.util.List;
diff --git a/src/de/lmu/ifi/dbs/elki/math/linearalgebra/pca/NormalizingEigenPairFilter.java b/src/de/lmu/ifi/dbs/elki/math/linearalgebra/pca/NormalizingEigenPairFilter.java
index 261455c0..47dbb01a 100644
--- a/src/de/lmu/ifi/dbs/elki/math/linearalgebra/pca/NormalizingEigenPairFilter.java
+++ b/src/de/lmu/ifi/dbs/elki/math/linearalgebra/pca/NormalizingEigenPairFilter.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.math.linearalgebra.pca;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.ArrayList;
import java.util.List;
diff --git a/src/de/lmu/ifi/dbs/elki/math/linearalgebra/pca/PCAFilteredResult.java b/src/de/lmu/ifi/dbs/elki/math/linearalgebra/pca/PCAFilteredResult.java
index 5d10d4bc..30453f0c 100644
--- a/src/de/lmu/ifi/dbs/elki/math/linearalgebra/pca/PCAFilteredResult.java
+++ b/src/de/lmu/ifi/dbs/elki/math/linearalgebra/pca/PCAFilteredResult.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.math.linearalgebra.pca;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.Iterator;
import java.util.List;
diff --git a/src/de/lmu/ifi/dbs/elki/math/linearalgebra/pca/PCAFilteredRunner.java b/src/de/lmu/ifi/dbs/elki/math/linearalgebra/pca/PCAFilteredRunner.java
index 297abac0..799502fa 100644
--- a/src/de/lmu/ifi/dbs/elki/math/linearalgebra/pca/PCAFilteredRunner.java
+++ b/src/de/lmu/ifi/dbs/elki/math/linearalgebra/pca/PCAFilteredRunner.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.math.linearalgebra.pca;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.Collection;
diff --git a/src/de/lmu/ifi/dbs/elki/math/linearalgebra/pca/PCAResult.java b/src/de/lmu/ifi/dbs/elki/math/linearalgebra/pca/PCAResult.java
index 17c3e184..26497645 100644
--- a/src/de/lmu/ifi/dbs/elki/math/linearalgebra/pca/PCAResult.java
+++ b/src/de/lmu/ifi/dbs/elki/math/linearalgebra/pca/PCAResult.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.math.linearalgebra.pca;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.math.linearalgebra.Matrix;
import de.lmu.ifi.dbs.elki.math.linearalgebra.SortedEigenPairs;
diff --git a/src/de/lmu/ifi/dbs/elki/math/linearalgebra/pca/PCARunner.java b/src/de/lmu/ifi/dbs/elki/math/linearalgebra/pca/PCARunner.java
index 07dcbfec..21b4304f 100644
--- a/src/de/lmu/ifi/dbs/elki/math/linearalgebra/pca/PCARunner.java
+++ b/src/de/lmu/ifi/dbs/elki/math/linearalgebra/pca/PCARunner.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.math.linearalgebra.pca;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.Collection;
diff --git a/src/de/lmu/ifi/dbs/elki/math/linearalgebra/pca/PercentageEigenPairFilter.java b/src/de/lmu/ifi/dbs/elki/math/linearalgebra/pca/PercentageEigenPairFilter.java
index f1322d6a..b0065eae 100644
--- a/src/de/lmu/ifi/dbs/elki/math/linearalgebra/pca/PercentageEigenPairFilter.java
+++ b/src/de/lmu/ifi/dbs/elki/math/linearalgebra/pca/PercentageEigenPairFilter.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.math.linearalgebra.pca;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.ArrayList;
import java.util.List;
diff --git a/src/de/lmu/ifi/dbs/elki/math/linearalgebra/pca/ProgressiveEigenPairFilter.java b/src/de/lmu/ifi/dbs/elki/math/linearalgebra/pca/ProgressiveEigenPairFilter.java
index e8e455e1..f43ac424 100644
--- a/src/de/lmu/ifi/dbs/elki/math/linearalgebra/pca/ProgressiveEigenPairFilter.java
+++ b/src/de/lmu/ifi/dbs/elki/math/linearalgebra/pca/ProgressiveEigenPairFilter.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.math.linearalgebra.pca;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.ArrayList;
import java.util.List;
diff --git a/src/de/lmu/ifi/dbs/elki/math/linearalgebra/pca/RelativeEigenPairFilter.java b/src/de/lmu/ifi/dbs/elki/math/linearalgebra/pca/RelativeEigenPairFilter.java
index 16414238..5109b010 100644
--- a/src/de/lmu/ifi/dbs/elki/math/linearalgebra/pca/RelativeEigenPairFilter.java
+++ b/src/de/lmu/ifi/dbs/elki/math/linearalgebra/pca/RelativeEigenPairFilter.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.math.linearalgebra.pca;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.ArrayList;
import java.util.List;
diff --git a/src/de/lmu/ifi/dbs/elki/math/linearalgebra/pca/SignificantEigenPairFilter.java b/src/de/lmu/ifi/dbs/elki/math/linearalgebra/pca/SignificantEigenPairFilter.java
index 1c6502bf..d09b7312 100644
--- a/src/de/lmu/ifi/dbs/elki/math/linearalgebra/pca/SignificantEigenPairFilter.java
+++ b/src/de/lmu/ifi/dbs/elki/math/linearalgebra/pca/SignificantEigenPairFilter.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.math.linearalgebra.pca;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.ArrayList;
import java.util.List;
diff --git a/src/de/lmu/ifi/dbs/elki/math/linearalgebra/pca/StandardCovarianceMatrixBuilder.java b/src/de/lmu/ifi/dbs/elki/math/linearalgebra/pca/StandardCovarianceMatrixBuilder.java
index c39be039..393b26ec 100644
--- a/src/de/lmu/ifi/dbs/elki/math/linearalgebra/pca/StandardCovarianceMatrixBuilder.java
+++ b/src/de/lmu/ifi/dbs/elki/math/linearalgebra/pca/StandardCovarianceMatrixBuilder.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.math.linearalgebra.pca;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.data.NumberVector;
import de.lmu.ifi.dbs.elki.database.ids.DBIDs;
diff --git a/src/de/lmu/ifi/dbs/elki/math/linearalgebra/pca/WeakEigenPairFilter.java b/src/de/lmu/ifi/dbs/elki/math/linearalgebra/pca/WeakEigenPairFilter.java
index 549e767e..57d21ec1 100644
--- a/src/de/lmu/ifi/dbs/elki/math/linearalgebra/pca/WeakEigenPairFilter.java
+++ b/src/de/lmu/ifi/dbs/elki/math/linearalgebra/pca/WeakEigenPairFilter.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.math.linearalgebra.pca;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.ArrayList;
import java.util.List;
diff --git a/src/de/lmu/ifi/dbs/elki/math/linearalgebra/pca/WeightedCovarianceMatrixBuilder.java b/src/de/lmu/ifi/dbs/elki/math/linearalgebra/pca/WeightedCovarianceMatrixBuilder.java
index 9402397e..547737fe 100644
--- a/src/de/lmu/ifi/dbs/elki/math/linearalgebra/pca/WeightedCovarianceMatrixBuilder.java
+++ b/src/de/lmu/ifi/dbs/elki/math/linearalgebra/pca/WeightedCovarianceMatrixBuilder.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.math.linearalgebra.pca;
-/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.Collection;
import java.util.Iterator;
@@ -137,8 +138,7 @@ public class WeightedCovarianceMatrixBuilder<V extends NumberVector<? extends V,
stddev = Math.sqrt(stddev / ids.size());
}
- int i = 0;
- for(Iterator<DBID> it = ids.iterator(); it.hasNext(); i++) {
+ for(Iterator<DBID> it = ids.iterator(); it.hasNext();) {
V obj = database.get(it.next());
double distance = weightDistance.distance(centroid, obj).doubleValue();
double weight = weightfunction.getWeight(distance, maxdist, stddev);
diff --git a/src/de/lmu/ifi/dbs/elki/math/linearalgebra/pca/weightfunctions/ConstantWeight.java b/src/de/lmu/ifi/dbs/elki/math/linearalgebra/pca/weightfunctions/ConstantWeight.java
index 2901a75c..b31d15ea 100644
--- a/src/de/lmu/ifi/dbs/elki/math/linearalgebra/pca/weightfunctions/ConstantWeight.java
+++ b/src/de/lmu/ifi/dbs/elki/math/linearalgebra/pca/weightfunctions/ConstantWeight.java
@@ -1,26 +1,28 @@
package de.lmu.ifi.dbs.elki.math.linearalgebra.pca.weightfunctions;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
/**
* Constant Weight function
@@ -35,7 +37,7 @@ public final class ConstantWeight implements WeightFunction {
* No scaling - the result is always 1.0
*/
@Override
- public double getWeight(@SuppressWarnings("unused") double distance, @SuppressWarnings("unused") double max, @SuppressWarnings("unused") double stddev) {
+ public double getWeight(double distance, double max, double stddev) {
return 1.0;
}
}
diff --git a/src/de/lmu/ifi/dbs/elki/math/linearalgebra/pca/weightfunctions/ErfcStddevWeight.java b/src/de/lmu/ifi/dbs/elki/math/linearalgebra/pca/weightfunctions/ErfcStddevWeight.java
index fe2fbca2..71096f05 100644
--- a/src/de/lmu/ifi/dbs/elki/math/linearalgebra/pca/weightfunctions/ErfcStddevWeight.java
+++ b/src/de/lmu/ifi/dbs/elki/math/linearalgebra/pca/weightfunctions/ErfcStddevWeight.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.math.linearalgebra.pca.weightfunctions;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.math.MathUtil;
@@ -37,7 +38,7 @@ public final class ErfcStddevWeight implements WeightFunction {
* Return Erfc weight, scaled by standard deviation. max is ignored.
*/
@Override
- public double getWeight(double distance, @SuppressWarnings("unused") double max, double stddev) {
+ public double getWeight(double distance, double max, double stddev) {
if(stddev <= 0) {
return 1;
}
diff --git a/src/de/lmu/ifi/dbs/elki/math/linearalgebra/pca/weightfunctions/ErfcWeight.java b/src/de/lmu/ifi/dbs/elki/math/linearalgebra/pca/weightfunctions/ErfcWeight.java
index b497a29c..1a6cb5b6 100644
--- a/src/de/lmu/ifi/dbs/elki/math/linearalgebra/pca/weightfunctions/ErfcWeight.java
+++ b/src/de/lmu/ifi/dbs/elki/math/linearalgebra/pca/weightfunctions/ErfcWeight.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.math.linearalgebra.pca.weightfunctions;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.math.MathUtil;
@@ -40,7 +41,7 @@ public final class ErfcWeight implements WeightFunction {
* Get Erfc Weight, using distance / max. stddev is ignored.
*/
@Override
- public double getWeight(double distance, double max, @SuppressWarnings("unused") double stddev) {
+ public double getWeight(double distance, double max, double stddev) {
if(max <= 0) {
return 1.0;
}
diff --git a/src/de/lmu/ifi/dbs/elki/math/linearalgebra/pca/weightfunctions/ExponentialStddevWeight.java b/src/de/lmu/ifi/dbs/elki/math/linearalgebra/pca/weightfunctions/ExponentialStddevWeight.java
index 1d657f49..979ccaf5 100644
--- a/src/de/lmu/ifi/dbs/elki/math/linearalgebra/pca/weightfunctions/ExponentialStddevWeight.java
+++ b/src/de/lmu/ifi/dbs/elki/math/linearalgebra/pca/weightfunctions/ExponentialStddevWeight.java
@@ -1,26 +1,28 @@
package de.lmu.ifi.dbs.elki.math.linearalgebra.pca.weightfunctions;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
/**
* Exponential Weight function, scaled such that the result it 0.1 at distance
@@ -38,7 +40,7 @@ public final class ExponentialStddevWeight implements WeightFunction {
* Get exponential weight, max is ignored.
*/
@Override
- public double getWeight(double distance, @SuppressWarnings("unused") double max, double stddev) {
+ public double getWeight(double distance, double max, double stddev) {
if(stddev <= 0) {
return 1;
}
diff --git a/src/de/lmu/ifi/dbs/elki/math/linearalgebra/pca/weightfunctions/ExponentialWeight.java b/src/de/lmu/ifi/dbs/elki/math/linearalgebra/pca/weightfunctions/ExponentialWeight.java
index f204c1da..96077581 100644
--- a/src/de/lmu/ifi/dbs/elki/math/linearalgebra/pca/weightfunctions/ExponentialWeight.java
+++ b/src/de/lmu/ifi/dbs/elki/math/linearalgebra/pca/weightfunctions/ExponentialWeight.java
@@ -1,26 +1,28 @@
package de.lmu.ifi.dbs.elki.math.linearalgebra.pca.weightfunctions;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
/**
* Exponential Weight function, scaled such that the result it 0.1 at distance
@@ -40,7 +42,7 @@ public final class ExponentialWeight implements WeightFunction {
* Exponential Weight function. stddev is not used.
*/
@Override
- public double getWeight(double distance, double max, @SuppressWarnings("unused") double stddev) {
+ public double getWeight(double distance, double max, double stddev) {
if(max <= 0) {
return 1.0;
}
diff --git a/src/de/lmu/ifi/dbs/elki/math/linearalgebra/pca/weightfunctions/GaussStddevWeight.java b/src/de/lmu/ifi/dbs/elki/math/linearalgebra/pca/weightfunctions/GaussStddevWeight.java
index f4a64462..33ff90c5 100644
--- a/src/de/lmu/ifi/dbs/elki/math/linearalgebra/pca/weightfunctions/GaussStddevWeight.java
+++ b/src/de/lmu/ifi/dbs/elki/math/linearalgebra/pca/weightfunctions/GaussStddevWeight.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.math.linearalgebra.pca.weightfunctions;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.math.MathUtil;
@@ -45,7 +46,7 @@ public final class GaussStddevWeight implements WeightFunction {
* Get Gaussian Weight using standard deviation for scaling. max is ignored.
*/
@Override
- public double getWeight(double distance, @SuppressWarnings("unused") double max, double stddev) {
+ public double getWeight(double distance, double max, double stddev) {
if(stddev <= 0) {
return 1;
}
diff --git a/src/de/lmu/ifi/dbs/elki/math/linearalgebra/pca/weightfunctions/GaussWeight.java b/src/de/lmu/ifi/dbs/elki/math/linearalgebra/pca/weightfunctions/GaussWeight.java
index 87a69d4f..00eeb8b1 100644
--- a/src/de/lmu/ifi/dbs/elki/math/linearalgebra/pca/weightfunctions/GaussWeight.java
+++ b/src/de/lmu/ifi/dbs/elki/math/linearalgebra/pca/weightfunctions/GaussWeight.java
@@ -1,26 +1,28 @@
package de.lmu.ifi.dbs.elki.math.linearalgebra.pca.weightfunctions;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
/**
* Gaussian Weight function, scaled such that the result it 0.1 at distance ==
@@ -35,7 +37,7 @@ public final class GaussWeight implements WeightFunction {
* Get Gaussian weight. stddev is not used, scaled using max.
*/
@Override
- public double getWeight(double distance, double max, @SuppressWarnings("unused") double stddev) {
+ public double getWeight(double distance, double max, double stddev) {
if(max <= 0) {
return 1.0;
}
diff --git a/src/de/lmu/ifi/dbs/elki/math/linearalgebra/pca/weightfunctions/InverseLinearWeight.java b/src/de/lmu/ifi/dbs/elki/math/linearalgebra/pca/weightfunctions/InverseLinearWeight.java
index 58b8d047..f618c08b 100644
--- a/src/de/lmu/ifi/dbs/elki/math/linearalgebra/pca/weightfunctions/InverseLinearWeight.java
+++ b/src/de/lmu/ifi/dbs/elki/math/linearalgebra/pca/weightfunctions/InverseLinearWeight.java
@@ -1,26 +1,28 @@
package de.lmu.ifi.dbs.elki.math.linearalgebra.pca.weightfunctions;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
/**
* Inverse Linear Weight Function.
@@ -39,7 +41,7 @@ public final class InverseLinearWeight implements WeightFunction {
* NOTE: increasing weights are non-standard, and mostly for testing
*/
@Override
- public double getWeight(double distance, double max, @SuppressWarnings("unused") double stddev) {
+ public double getWeight(double distance, double max, double stddev) {
if(max <= 0) {
return 0.1;
}
diff --git a/src/de/lmu/ifi/dbs/elki/math/linearalgebra/pca/weightfunctions/InverseProportionalStddevWeight.java b/src/de/lmu/ifi/dbs/elki/math/linearalgebra/pca/weightfunctions/InverseProportionalStddevWeight.java
index b157a7e5..da1c0a61 100644
--- a/src/de/lmu/ifi/dbs/elki/math/linearalgebra/pca/weightfunctions/InverseProportionalStddevWeight.java
+++ b/src/de/lmu/ifi/dbs/elki/math/linearalgebra/pca/weightfunctions/InverseProportionalStddevWeight.java
@@ -1,26 +1,28 @@
package de.lmu.ifi.dbs.elki.math.linearalgebra.pca.weightfunctions;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
/**
* Inverse proportional weight function, scaled using the standard deviation.
@@ -34,7 +36,7 @@ public final class InverseProportionalStddevWeight implements WeightFunction {
* Get inverse proportional weight. max is ignored.
*/
@Override
- public double getWeight(double distance, @SuppressWarnings("unused") double max, double stddev) {
+ public double getWeight(double distance, double max, double stddev) {
if(stddev <= 0) {
return 1;
}
diff --git a/src/de/lmu/ifi/dbs/elki/math/linearalgebra/pca/weightfunctions/InverseProportionalWeight.java b/src/de/lmu/ifi/dbs/elki/math/linearalgebra/pca/weightfunctions/InverseProportionalWeight.java
index 2d19cf03..ee17b25b 100644
--- a/src/de/lmu/ifi/dbs/elki/math/linearalgebra/pca/weightfunctions/InverseProportionalWeight.java
+++ b/src/de/lmu/ifi/dbs/elki/math/linearalgebra/pca/weightfunctions/InverseProportionalWeight.java
@@ -1,26 +1,28 @@
package de.lmu.ifi.dbs.elki.math.linearalgebra.pca.weightfunctions;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
/**
* Inverse proportional weight function, scaled using the maximum.
@@ -34,7 +36,7 @@ public final class InverseProportionalWeight implements WeightFunction {
* Get inverse proportional weight. stddev is ignored.
*/
@Override
- public double getWeight(double distance, double max, @SuppressWarnings("unused") double stddev) {
+ public double getWeight(double distance, double max, double stddev) {
if(max <= 0) {
return 1.0;
}
diff --git a/src/de/lmu/ifi/dbs/elki/math/linearalgebra/pca/weightfunctions/LinearWeight.java b/src/de/lmu/ifi/dbs/elki/math/linearalgebra/pca/weightfunctions/LinearWeight.java
index 907a81d9..241c2673 100644
--- a/src/de/lmu/ifi/dbs/elki/math/linearalgebra/pca/weightfunctions/LinearWeight.java
+++ b/src/de/lmu/ifi/dbs/elki/math/linearalgebra/pca/weightfunctions/LinearWeight.java
@@ -1,26 +1,28 @@
package de.lmu.ifi.dbs.elki.math.linearalgebra.pca.weightfunctions;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
/**
* Linear weight function, scaled using the maximum such that it goes from 1.0
@@ -35,7 +37,7 @@ public final class LinearWeight implements WeightFunction {
* Linear decreasing weight, from 1.0 to 0.1. Stddev is ignored.
*/
@Override
- public double getWeight(double distance, double max, @SuppressWarnings("unused") double stddev) {
+ public double getWeight(double distance, double max, double stddev) {
if(max <= 0) {
return 1.0;
}
diff --git a/src/de/lmu/ifi/dbs/elki/math/linearalgebra/pca/weightfunctions/QuadraticStddevWeight.java b/src/de/lmu/ifi/dbs/elki/math/linearalgebra/pca/weightfunctions/QuadraticStddevWeight.java
index 3b26a85e..7d9b41ad 100644
--- a/src/de/lmu/ifi/dbs/elki/math/linearalgebra/pca/weightfunctions/QuadraticStddevWeight.java
+++ b/src/de/lmu/ifi/dbs/elki/math/linearalgebra/pca/weightfunctions/QuadraticStddevWeight.java
@@ -1,26 +1,28 @@
package de.lmu.ifi.dbs.elki.math.linearalgebra.pca.weightfunctions;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
/**
* Quadratic weight function, scaled using the standard deviation.
@@ -42,7 +44,7 @@ public final class QuadraticStddevWeight implements WeightFunction {
* Evaluate weight function at given parameters. max is ignored.
*/
@Override
- public double getWeight(double distance, @SuppressWarnings("unused") double max, double stddev) {
+ public double getWeight(double distance, double max, double stddev) {
if(stddev <= 0) {
return 1;
}
diff --git a/src/de/lmu/ifi/dbs/elki/math/linearalgebra/pca/weightfunctions/QuadraticWeight.java b/src/de/lmu/ifi/dbs/elki/math/linearalgebra/pca/weightfunctions/QuadraticWeight.java
index 7de38dda..9755c963 100644
--- a/src/de/lmu/ifi/dbs/elki/math/linearalgebra/pca/weightfunctions/QuadraticWeight.java
+++ b/src/de/lmu/ifi/dbs/elki/math/linearalgebra/pca/weightfunctions/QuadraticWeight.java
@@ -1,26 +1,28 @@
package de.lmu.ifi.dbs.elki.math.linearalgebra.pca.weightfunctions;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
/**
* Quadratic weight function, scaled using the maximum to reach 0.1 at that
@@ -35,7 +37,7 @@ public final class QuadraticWeight implements WeightFunction {
* Evaluate quadratic weight. stddev is ignored.
*/
@Override
- public double getWeight(double distance, double max, @SuppressWarnings("unused") double stddev) {
+ public double getWeight(double distance, double max, double stddev) {
if(max <= 0) {
return 1.0;
}
diff --git a/src/de/lmu/ifi/dbs/elki/math/linearalgebra/pca/weightfunctions/WeightFunction.java b/src/de/lmu/ifi/dbs/elki/math/linearalgebra/pca/weightfunctions/WeightFunction.java
index bf8e32e6..c3102350 100644
--- a/src/de/lmu/ifi/dbs/elki/math/linearalgebra/pca/weightfunctions/WeightFunction.java
+++ b/src/de/lmu/ifi/dbs/elki/math/linearalgebra/pca/weightfunctions/WeightFunction.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.math.linearalgebra.pca.weightfunctions;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.utilities.InspectionUtilFrequentlyScanned;
diff --git a/src/de/lmu/ifi/dbs/elki/math/spacefillingcurves/ZCurve.java b/src/de/lmu/ifi/dbs/elki/math/spacefillingcurves/ZCurve.java
index 5ca358ea..69dd8ff6 100644
--- a/src/de/lmu/ifi/dbs/elki/math/spacefillingcurves/ZCurve.java
+++ b/src/de/lmu/ifi/dbs/elki/math/spacefillingcurves/ZCurve.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.math.spacefillingcurves;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.math.BigInteger;
import java.util.ArrayList;
diff --git a/src/de/lmu/ifi/dbs/elki/math/statistics/EpanechnikovKernelDensityFunction.java b/src/de/lmu/ifi/dbs/elki/math/statistics/EpanechnikovKernelDensityFunction.java
index 71e06922..0b48a69e 100644
--- a/src/de/lmu/ifi/dbs/elki/math/statistics/EpanechnikovKernelDensityFunction.java
+++ b/src/de/lmu/ifi/dbs/elki/math/statistics/EpanechnikovKernelDensityFunction.java
@@ -1,26 +1,28 @@
package de.lmu.ifi.dbs.elki.math.statistics;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
+
/**
* Epanechnikov kernel density estimator.
diff --git a/src/de/lmu/ifi/dbs/elki/math/statistics/GaussianKernelDensityFunction.java b/src/de/lmu/ifi/dbs/elki/math/statistics/GaussianKernelDensityFunction.java
index 18570a33..7adf8ee1 100644
--- a/src/de/lmu/ifi/dbs/elki/math/statistics/GaussianKernelDensityFunction.java
+++ b/src/de/lmu/ifi/dbs/elki/math/statistics/GaussianKernelDensityFunction.java
@@ -1,26 +1,28 @@
package de.lmu.ifi.dbs.elki.math.statistics;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
+
/**
* Gaussian kernel density estimator.
diff --git a/src/de/lmu/ifi/dbs/elki/math/statistics/KernelDensityEstimator.java b/src/de/lmu/ifi/dbs/elki/math/statistics/KernelDensityEstimator.java
index 49b5b68b..398e6927 100644
--- a/src/de/lmu/ifi/dbs/elki/math/statistics/KernelDensityEstimator.java
+++ b/src/de/lmu/ifi/dbs/elki/math/statistics/KernelDensityEstimator.java
@@ -1,26 +1,28 @@
package de.lmu.ifi.dbs.elki.math.statistics;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
/**
* Estimate density given an array of points.
diff --git a/src/de/lmu/ifi/dbs/elki/math/statistics/KernelDensityFunction.java b/src/de/lmu/ifi/dbs/elki/math/statistics/KernelDensityFunction.java
index b063f959..4c9100fd 100644
--- a/src/de/lmu/ifi/dbs/elki/math/statistics/KernelDensityFunction.java
+++ b/src/de/lmu/ifi/dbs/elki/math/statistics/KernelDensityFunction.java
@@ -1,26 +1,28 @@
package de.lmu.ifi.dbs.elki.math.statistics;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
/**
* Inner function of a kernel density estimator.
diff --git a/src/de/lmu/ifi/dbs/elki/math/statistics/LinearRegression.java b/src/de/lmu/ifi/dbs/elki/math/statistics/LinearRegression.java
index 4a535879..f28986f0 100644
--- a/src/de/lmu/ifi/dbs/elki/math/statistics/LinearRegression.java
+++ b/src/de/lmu/ifi/dbs/elki/math/statistics/LinearRegression.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.math.statistics;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.List;
@@ -43,13 +44,13 @@ public class LinearRegression {
public LinearRegression(List<DoubleDoublePair> points) {
double sumy = 0.0;
double sumx = 0.0;
- double sumyy = 0.0;
+ //double sumyy = 0.0;
double sumxx = 0.0;
double sumxy = 0.0;
int gap = 0;
for(DoubleDoublePair point : points) {
sumy += point.second;
- sumyy += point.second * point.second;
+ //sumyy += point.second * point.second;
gap++;
sumx += point.first;
sumxx += point.first * point.first;
diff --git a/src/de/lmu/ifi/dbs/elki/math/statistics/MultipleLinearRegression.java b/src/de/lmu/ifi/dbs/elki/math/statistics/MultipleLinearRegression.java
index dee844e2..90f80135 100644
--- a/src/de/lmu/ifi/dbs/elki/math/statistics/MultipleLinearRegression.java
+++ b/src/de/lmu/ifi/dbs/elki/math/statistics/MultipleLinearRegression.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.math.statistics;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.math.linearalgebra.Matrix;
import de.lmu.ifi.dbs.elki.math.linearalgebra.Vector;
diff --git a/src/de/lmu/ifi/dbs/elki/math/statistics/PolynomialRegression.java b/src/de/lmu/ifi/dbs/elki/math/statistics/PolynomialRegression.java
index 83edfe00..1b785f75 100644
--- a/src/de/lmu/ifi/dbs/elki/math/statistics/PolynomialRegression.java
+++ b/src/de/lmu/ifi/dbs/elki/math/statistics/PolynomialRegression.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.math.statistics;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.math.linearalgebra.Matrix;
import de.lmu.ifi.dbs.elki.math.linearalgebra.Vector;
diff --git a/src/de/lmu/ifi/dbs/elki/math/statistics/QuickSelect.java b/src/de/lmu/ifi/dbs/elki/math/statistics/QuickSelect.java
index 2cea485b..efacd395 100644
--- a/src/de/lmu/ifi/dbs/elki/math/statistics/QuickSelect.java
+++ b/src/de/lmu/ifi/dbs/elki/math/statistics/QuickSelect.java
@@ -1,26 +1,28 @@
package de.lmu.ifi.dbs.elki.math.statistics;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
+
/**
* QuickSelect computes ("selects") the element at a given rank and can be used
diff --git a/src/de/lmu/ifi/dbs/elki/math/statistics/StudentDistribution.java b/src/de/lmu/ifi/dbs/elki/math/statistics/StudentDistribution.java
index f4816f3b..e9ad4a00 100644
--- a/src/de/lmu/ifi/dbs/elki/math/statistics/StudentDistribution.java
+++ b/src/de/lmu/ifi/dbs/elki/math/statistics/StudentDistribution.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.math.statistics;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.HashMap;
import java.util.Map;
diff --git a/src/de/lmu/ifi/dbs/elki/math/statistics/TriangularKernelDensityFunction.java b/src/de/lmu/ifi/dbs/elki/math/statistics/TriangularKernelDensityFunction.java
index eb021960..7beb17c3 100644
--- a/src/de/lmu/ifi/dbs/elki/math/statistics/TriangularKernelDensityFunction.java
+++ b/src/de/lmu/ifi/dbs/elki/math/statistics/TriangularKernelDensityFunction.java
@@ -1,26 +1,28 @@
package de.lmu.ifi.dbs.elki.math.statistics;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
+
/**
* Triangular kernel density estimator.
diff --git a/src/de/lmu/ifi/dbs/elki/math/statistics/UniformKernelDensityFunction.java b/src/de/lmu/ifi/dbs/elki/math/statistics/UniformKernelDensityFunction.java
index 013a5c6b..2f000736 100644
--- a/src/de/lmu/ifi/dbs/elki/math/statistics/UniformKernelDensityFunction.java
+++ b/src/de/lmu/ifi/dbs/elki/math/statistics/UniformKernelDensityFunction.java
@@ -1,26 +1,28 @@
package de.lmu.ifi.dbs.elki.math.statistics;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
+
/**
* Uniform / Rectangular kernel density estimator.
diff --git a/src/de/lmu/ifi/dbs/elki/package-info.java b/src/de/lmu/ifi/dbs/elki/package-info.java
index 8fd6af69..b37bc467 100644
--- a/src/de/lmu/ifi/dbs/elki/package-info.java
+++ b/src/de/lmu/ifi/dbs/elki/package-info.java
@@ -10,25 +10,25 @@
* @apiviz.exclude ^experimentalcode\.
*/
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
package de.lmu.ifi.dbs.elki; \ No newline at end of file
diff --git a/src/de/lmu/ifi/dbs/elki/persistent/AbstractPage.java b/src/de/lmu/ifi/dbs/elki/persistent/AbstractPage.java
index de81d0ee..25ed8b7f 100644
--- a/src/de/lmu/ifi/dbs/elki/persistent/AbstractPage.java
+++ b/src/de/lmu/ifi/dbs/elki/persistent/AbstractPage.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.persistent;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.io.IOException;
import java.io.ObjectInput;
diff --git a/src/de/lmu/ifi/dbs/elki/persistent/AbstractPageFile.java b/src/de/lmu/ifi/dbs/elki/persistent/AbstractPageFile.java
index 04dd9705..54aa7e39 100644
--- a/src/de/lmu/ifi/dbs/elki/persistent/AbstractPageFile.java
+++ b/src/de/lmu/ifi/dbs/elki/persistent/AbstractPageFile.java
@@ -1,26 +1,28 @@
package de.lmu.ifi.dbs.elki.persistent;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
/**
* Abstract base class for the page file API for both caches and true page files
diff --git a/src/de/lmu/ifi/dbs/elki/persistent/AbstractStoringPageFile.java b/src/de/lmu/ifi/dbs/elki/persistent/AbstractStoringPageFile.java
index e9845ca2..bb4e915d 100644
--- a/src/de/lmu/ifi/dbs/elki/persistent/AbstractStoringPageFile.java
+++ b/src/de/lmu/ifi/dbs/elki/persistent/AbstractStoringPageFile.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.persistent;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.Stack;
diff --git a/src/de/lmu/ifi/dbs/elki/persistent/ByteArrayUtil.java b/src/de/lmu/ifi/dbs/elki/persistent/ByteArrayUtil.java
index ea945905..5b7c34df 100644
--- a/src/de/lmu/ifi/dbs/elki/persistent/ByteArrayUtil.java
+++ b/src/de/lmu/ifi/dbs/elki/persistent/ByteArrayUtil.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.persistent;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.lang.reflect.Method;
import java.nio.ByteBuffer;
diff --git a/src/de/lmu/ifi/dbs/elki/persistent/ByteBufferInputStream.java b/src/de/lmu/ifi/dbs/elki/persistent/ByteBufferInputStream.java
index 11237c05..3fd7b35f 100644
--- a/src/de/lmu/ifi/dbs/elki/persistent/ByteBufferInputStream.java
+++ b/src/de/lmu/ifi/dbs/elki/persistent/ByteBufferInputStream.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.persistent;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.io.InputStream;
import java.nio.ByteBuffer;
diff --git a/src/de/lmu/ifi/dbs/elki/persistent/ByteBufferOutputStream.java b/src/de/lmu/ifi/dbs/elki/persistent/ByteBufferOutputStream.java
index 8cc32dca..6c6c5c43 100644
--- a/src/de/lmu/ifi/dbs/elki/persistent/ByteBufferOutputStream.java
+++ b/src/de/lmu/ifi/dbs/elki/persistent/ByteBufferOutputStream.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.persistent;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.io.OutputStream;
import java.nio.ByteBuffer;
diff --git a/src/de/lmu/ifi/dbs/elki/persistent/ByteBufferSerializer.java b/src/de/lmu/ifi/dbs/elki/persistent/ByteBufferSerializer.java
index 4bb8e3c9..0a9403ac 100644
--- a/src/de/lmu/ifi/dbs/elki/persistent/ByteBufferSerializer.java
+++ b/src/de/lmu/ifi/dbs/elki/persistent/ByteBufferSerializer.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.persistent;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.io.IOException;
import java.nio.ByteBuffer;
diff --git a/src/de/lmu/ifi/dbs/elki/persistent/DefaultPageHeader.java b/src/de/lmu/ifi/dbs/elki/persistent/DefaultPageHeader.java
index 5200655c..e2be5aaf 100644
--- a/src/de/lmu/ifi/dbs/elki/persistent/DefaultPageHeader.java
+++ b/src/de/lmu/ifi/dbs/elki/persistent/DefaultPageHeader.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.persistent;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.io.IOException;
import java.io.RandomAccessFile;
diff --git a/src/de/lmu/ifi/dbs/elki/persistent/FixedSizeByteBufferSerializer.java b/src/de/lmu/ifi/dbs/elki/persistent/FixedSizeByteBufferSerializer.java
index a8b7cf04..d68ac994 100644
--- a/src/de/lmu/ifi/dbs/elki/persistent/FixedSizeByteBufferSerializer.java
+++ b/src/de/lmu/ifi/dbs/elki/persistent/FixedSizeByteBufferSerializer.java
@@ -1,26 +1,28 @@
package de.lmu.ifi.dbs.elki.persistent;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
/**
* Serializers with a fixed length serialization.
diff --git a/src/de/lmu/ifi/dbs/elki/persistent/LRUCache.java b/src/de/lmu/ifi/dbs/elki/persistent/LRUCache.java
index f4f7b4a1..e93924f0 100644
--- a/src/de/lmu/ifi/dbs/elki/persistent/LRUCache.java
+++ b/src/de/lmu/ifi/dbs/elki/persistent/LRUCache.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.persistent;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.ArrayList;
import java.util.Collections;
diff --git a/src/de/lmu/ifi/dbs/elki/persistent/MemoryPageFile.java b/src/de/lmu/ifi/dbs/elki/persistent/MemoryPageFile.java
index 10e3434f..13e3ec04 100644
--- a/src/de/lmu/ifi/dbs/elki/persistent/MemoryPageFile.java
+++ b/src/de/lmu/ifi/dbs/elki/persistent/MemoryPageFile.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.persistent;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.HashMap;
import java.util.Map;
diff --git a/src/de/lmu/ifi/dbs/elki/persistent/OnDiskArray.java b/src/de/lmu/ifi/dbs/elki/persistent/OnDiskArray.java
index b7605f00..2290398c 100644
--- a/src/de/lmu/ifi/dbs/elki/persistent/OnDiskArray.java
+++ b/src/de/lmu/ifi/dbs/elki/persistent/OnDiskArray.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.persistent;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.io.File;
import java.io.IOException;
diff --git a/src/de/lmu/ifi/dbs/elki/persistent/OnDiskArrayPageFile.java b/src/de/lmu/ifi/dbs/elki/persistent/OnDiskArrayPageFile.java
index cbcb13bd..d7a546fe 100644
--- a/src/de/lmu/ifi/dbs/elki/persistent/OnDiskArrayPageFile.java
+++ b/src/de/lmu/ifi/dbs/elki/persistent/OnDiskArrayPageFile.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.persistent;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.io.ByteArrayOutputStream;
import java.io.File;
diff --git a/src/de/lmu/ifi/dbs/elki/persistent/OnDiskUpperTriangleMatrix.java b/src/de/lmu/ifi/dbs/elki/persistent/OnDiskUpperTriangleMatrix.java
index cc1880c7..6d38348a 100644
--- a/src/de/lmu/ifi/dbs/elki/persistent/OnDiskUpperTriangleMatrix.java
+++ b/src/de/lmu/ifi/dbs/elki/persistent/OnDiskUpperTriangleMatrix.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.persistent;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.io.File;
import java.io.IOException;
diff --git a/src/de/lmu/ifi/dbs/elki/persistent/Page.java b/src/de/lmu/ifi/dbs/elki/persistent/Page.java
index 1498ac67..d296a840 100644
--- a/src/de/lmu/ifi/dbs/elki/persistent/Page.java
+++ b/src/de/lmu/ifi/dbs/elki/persistent/Page.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.persistent;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.io.Externalizable;
diff --git a/src/de/lmu/ifi/dbs/elki/persistent/PageFile.java b/src/de/lmu/ifi/dbs/elki/persistent/PageFile.java
index 698fb3a2..a65fabeb 100644
--- a/src/de/lmu/ifi/dbs/elki/persistent/PageFile.java
+++ b/src/de/lmu/ifi/dbs/elki/persistent/PageFile.java
@@ -1,26 +1,28 @@
package de.lmu.ifi.dbs.elki.persistent;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
+
/**
* Page file interface.
diff --git a/src/de/lmu/ifi/dbs/elki/persistent/PageFileStatistics.java b/src/de/lmu/ifi/dbs/elki/persistent/PageFileStatistics.java
index a90d13ce..2f2bd821 100644
--- a/src/de/lmu/ifi/dbs/elki/persistent/PageFileStatistics.java
+++ b/src/de/lmu/ifi/dbs/elki/persistent/PageFileStatistics.java
@@ -1,26 +1,28 @@
package de.lmu.ifi.dbs.elki.persistent;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
+
/**
* Statistics API for a Page File.
diff --git a/src/de/lmu/ifi/dbs/elki/persistent/PageFileUtil.java b/src/de/lmu/ifi/dbs/elki/persistent/PageFileUtil.java
index b2b32958..6a0dbb92 100644
--- a/src/de/lmu/ifi/dbs/elki/persistent/PageFileUtil.java
+++ b/src/de/lmu/ifi/dbs/elki/persistent/PageFileUtil.java
@@ -1,26 +1,28 @@
package de.lmu.ifi.dbs.elki.persistent;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
/**
* Page file statistic utility functions.
diff --git a/src/de/lmu/ifi/dbs/elki/persistent/PageHeader.java b/src/de/lmu/ifi/dbs/elki/persistent/PageHeader.java
index 66f0a326..911e81c2 100644
--- a/src/de/lmu/ifi/dbs/elki/persistent/PageHeader.java
+++ b/src/de/lmu/ifi/dbs/elki/persistent/PageHeader.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.persistent;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.io.IOException;
import java.io.RandomAccessFile;
diff --git a/src/de/lmu/ifi/dbs/elki/persistent/PersistentPageFile.java b/src/de/lmu/ifi/dbs/elki/persistent/PersistentPageFile.java
index 95bdc4f0..b40e56f5 100644
--- a/src/de/lmu/ifi/dbs/elki/persistent/PersistentPageFile.java
+++ b/src/de/lmu/ifi/dbs/elki/persistent/PersistentPageFile.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.persistent;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.io.ByteArrayInputStream;
import java.io.ByteArrayOutputStream;
diff --git a/src/de/lmu/ifi/dbs/elki/properties/ELKI.properties b/src/de/lmu/ifi/dbs/elki/properties/ELKI.properties
index 2af73f55..905b1751 100644
--- a/src/de/lmu/ifi/dbs/elki/properties/ELKI.properties
+++ b/src/de/lmu/ifi/dbs/elki/properties/ELKI.properties
@@ -2,7 +2,30 @@
# algorithms - default package: de.lmu.ifi.dbs.elki.algorithm
de.lmu.ifi.dbs.elki.algorithm.Algorithm=\
de.lmu.ifi.dbs.elki.algorithm.NullAlgorithm,\
-# de.lmu.ifi.dbs.elki.algorithm.DummyAlgorithm,\
+ de.lmu.ifi.dbs.elki.algorithm.clustering.DBSCAN,\
+ de.lmu.ifi.dbs.elki.algorithm.clustering.DeLiClu,\
+ de.lmu.ifi.dbs.elki.algorithm.clustering.EM,\
+ de.lmu.ifi.dbs.elki.algorithm.clustering.KMeans,\
+ de.lmu.ifi.dbs.elki.algorithm.clustering.OPTICSXi,\
+ de.lmu.ifi.dbs.elki.algorithm.clustering.OPTICS,\
+ de.lmu.ifi.dbs.elki.algorithm.clustering.SLINK,\
+ de.lmu.ifi.dbs.elki.algorithm.clustering.SNNClustering,\
+ de.lmu.ifi.dbs.elki.algorithm.clustering.correlation.CASH,\
+ de.lmu.ifi.dbs.elki.algorithm.clustering.correlation.COPAC,\
+ de.lmu.ifi.dbs.elki.algorithm.clustering.correlation.ERiC,\
+ de.lmu.ifi.dbs.elki.algorithm.clustering.correlation.FourC,\
+ de.lmu.ifi.dbs.elki.algorithm.clustering.correlation.HiCO,\
+ de.lmu.ifi.dbs.elki.algorithm.clustering.correlation.ORCLUS,\
+ de.lmu.ifi.dbs.elki.algorithm.clustering.subspace.CLIQUE,\
+ de.lmu.ifi.dbs.elki.algorithm.clustering.subspace.DiSH,\
+ de.lmu.ifi.dbs.elki.algorithm.clustering.subspace.HiSC,\
+ de.lmu.ifi.dbs.elki.algorithm.clustering.subspace.PreDeCon,\
+ de.lmu.ifi.dbs.elki.algorithm.clustering.subspace.PROCLUS,\
+ de.lmu.ifi.dbs.elki.algorithm.clustering.subspace.SUBCLU,\
+ de.lmu.ifi.dbs.elki.algorithm.clustering.trivial.ByLabelClustering,\
+ de.lmu.ifi.dbs.elki.algorithm.clustering.trivial.ByLabelHierarchicalClustering,\
+ de.lmu.ifi.dbs.elki.algorithm.clustering.trivial.TrivialAllInOne,\
+ de.lmu.ifi.dbs.elki.algorithm.clustering.trivial.TrivialAllNoise,\
de.lmu.ifi.dbs.elki.algorithm.outlier.ABOD,\
de.lmu.ifi.dbs.elki.algorithm.outlier.AggarwalYuEvolutionary,\
de.lmu.ifi.dbs.elki.algorithm.outlier.AggarwalYuNaive,\
@@ -39,38 +62,15 @@ de.lmu.ifi.dbs.elki.algorithm.Algorithm=\
de.lmu.ifi.dbs.elki.algorithm.outlier.trivial.ByLabelOutlier,\
de.lmu.ifi.dbs.elki.algorithm.outlier.trivial.TrivialAllOutlier,\
de.lmu.ifi.dbs.elki.algorithm.outlier.trivial.TrivialNoOutlier,\
+ de.lmu.ifi.dbs.elki.algorithm.statistics.EvaluateRankingQuality,\
+ de.lmu.ifi.dbs.elki.algorithm.statistics.RankingQualityHistogram,\
+ de.lmu.ifi.dbs.elki.algorithm.statistics.DistanceStatisticsWithClasses,\
+# de.lmu.ifi.dbs.elki.algorithm.DummyAlgorithm,\
de.lmu.ifi.dbs.elki.algorithm.APRIORI,\
de.lmu.ifi.dbs.elki.algorithm.DependencyDerivator,\
de.lmu.ifi.dbs.elki.algorithm.KNNDistanceOrder,\
de.lmu.ifi.dbs.elki.algorithm.KNNJoin,\
de.lmu.ifi.dbs.elki.algorithm.MaterializeDistances,\
- de.lmu.ifi.dbs.elki.algorithm.statistics.EvaluateRankingQuality,\
- de.lmu.ifi.dbs.elki.algorithm.statistics.RankingQualityHistogram,\
- de.lmu.ifi.dbs.elki.algorithm.statistics.DistanceStatisticsWithClasses,\
- de.lmu.ifi.dbs.elki.algorithm.clustering.DBSCAN,\
- de.lmu.ifi.dbs.elki.algorithm.clustering.DeLiClu,\
- de.lmu.ifi.dbs.elki.algorithm.clustering.EM,\
- de.lmu.ifi.dbs.elki.algorithm.clustering.KMeans,\
- de.lmu.ifi.dbs.elki.algorithm.clustering.OPTICSXi,\
- de.lmu.ifi.dbs.elki.algorithm.clustering.OPTICS,\
- de.lmu.ifi.dbs.elki.algorithm.clustering.SLINK,\
- de.lmu.ifi.dbs.elki.algorithm.clustering.SNNClustering,\
- de.lmu.ifi.dbs.elki.algorithm.clustering.correlation.CASH,\
- de.lmu.ifi.dbs.elki.algorithm.clustering.correlation.COPAC,\
- de.lmu.ifi.dbs.elki.algorithm.clustering.correlation.ERiC,\
- de.lmu.ifi.dbs.elki.algorithm.clustering.correlation.FourC,\
- de.lmu.ifi.dbs.elki.algorithm.clustering.correlation.HiCO,\
- de.lmu.ifi.dbs.elki.algorithm.clustering.correlation.ORCLUS,\
- de.lmu.ifi.dbs.elki.algorithm.clustering.subspace.CLIQUE,\
- de.lmu.ifi.dbs.elki.algorithm.clustering.subspace.DiSH,\
- de.lmu.ifi.dbs.elki.algorithm.clustering.subspace.HiSC,\
- de.lmu.ifi.dbs.elki.algorithm.clustering.subspace.PreDeCon,\
- de.lmu.ifi.dbs.elki.algorithm.clustering.subspace.PROCLUS,\
- de.lmu.ifi.dbs.elki.algorithm.clustering.subspace.SUBCLU,\
- de.lmu.ifi.dbs.elki.algorithm.clustering.trivial.ByLabelClustering,\
- de.lmu.ifi.dbs.elki.algorithm.clustering.trivial.ByLabelHierarchicalClustering,\
- de.lmu.ifi.dbs.elki.algorithm.clustering.trivial.TrivialAllInOne,\
- de.lmu.ifi.dbs.elki.algorithm.clustering.trivial.TrivialAllNoise,\
# #######################################################
# distance based algorithm - default package: de.lmu.ifi.dbs.elki.algorithm
de.lmu.ifi.dbs.elki.algorithm.AbstractDistanceBasedAlgorithm=\
@@ -212,6 +212,7 @@ de.lmu.ifi.dbs.elki.distance.distancefunction.DistanceFunction=\
de.lmu.ifi.dbs.elki.distance.distancefunction.CosineDistanceFunction,\
de.lmu.ifi.dbs.elki.distance.distancefunction.RandomStableDistanceFunction,\
de.lmu.ifi.dbs.elki.distance.distancefunction.SquaredEuclideanDistanceFunction,\
+ de.lmu.ifi.dbs.elki.distance.distancefunction.SharedNearestNeighborJaccardDistanceFunction,\
de.lmu.ifi.dbs.elki.distance.distancefunction.LocallyWeightedDistanceFunction,\
# de.lmu.ifi.dbs.elki.distance.distancefunction.WeightedDistanceFunction,\
# de.lmu.ifi.dbs.elki.distance.distancefunction.MinKDistance,\
@@ -344,6 +345,7 @@ de.lmu.ifi.dbs.elki.distance.distancefunction.SpatialPrimitiveDoubleDistanceFunc
# preprocessor based distance functions functions - default package: de.lmu.ifi.dbs.elki.distance.distancefunction
de.lmu.ifi.dbs.elki.distance.distancefunction.AbstractIndexBasedDistanceFunction=\
de.lmu.ifi.dbs.elki.distance.distancefunction.LocallyWeightedDistanceFunction,\
+ de.lmu.ifi.dbs.elki.distance.distancefunction.SharedNearestNeighborJaccardDistanceFunction,\
de.lmu.ifi.dbs.elki.distance.distancefunction.correlation.ERiCDistanceFunction,\
de.lmu.ifi.dbs.elki.distance.distancefunction.correlation.PCABasedCorrelationDistanceFunction,\
de.lmu.ifi.dbs.elki.distance.distancefunction.subspace.SubspaceDistanceFunction,\
@@ -388,14 +390,15 @@ de.lmu.ifi.dbs.elki.evaluation.Evaluator=\
# #######################################################
# Parser - default package: de.lmu.ifi.dbs.elki.datasource.parser
de.lmu.ifi.dbs.elki.datasource.parser.Parser=\
- de.lmu.ifi.dbs.elki.datasource.parser.BitVectorLabelParser,\
- de.lmu.ifi.dbs.elki.datasource.parser.ParameterizationFunctionLabelParser,\
de.lmu.ifi.dbs.elki.datasource.parser.DoubleVectorLabelParser,\
+ de.lmu.ifi.dbs.elki.datasource.parser.ArffParser,\
de.lmu.ifi.dbs.elki.datasource.parser.FloatVectorLabelParser,\
de.lmu.ifi.dbs.elki.datasource.parser.DoubleVectorLabelTransposingParser,\
de.lmu.ifi.dbs.elki.datasource.parser.SparseBitVectorLabelParser,\
de.lmu.ifi.dbs.elki.datasource.parser.SparseFloatVectorLabelParser,\
de.lmu.ifi.dbs.elki.datasource.parser.TermFrequencyParser,\
+ de.lmu.ifi.dbs.elki.datasource.parser.BitVectorLabelParser,\
+ de.lmu.ifi.dbs.elki.datasource.parser.ParameterizationFunctionLabelParser,\
de.lmu.ifi.dbs.elki.datasource.parser.SimplePolygonParser,\
# #######################################################
# Line based parsers
diff --git a/src/de/lmu/ifi/dbs/elki/properties/IterateKnownImplementations.java b/src/de/lmu/ifi/dbs/elki/properties/IterateKnownImplementations.java
index ec34fc7c..3cab826f 100644
--- a/src/de/lmu/ifi/dbs/elki/properties/IterateKnownImplementations.java
+++ b/src/de/lmu/ifi/dbs/elki/properties/IterateKnownImplementations.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.properties;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.Iterator;
import java.util.regex.Pattern;
diff --git a/src/de/lmu/ifi/dbs/elki/properties/Properties.java b/src/de/lmu/ifi/dbs/elki/properties/Properties.java
index 01cbc99f..af777c1e 100644
--- a/src/de/lmu/ifi/dbs/elki/properties/Properties.java
+++ b/src/de/lmu/ifi/dbs/elki/properties/Properties.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.properties;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.io.File;
import java.io.FileNotFoundException;
diff --git a/src/de/lmu/ifi/dbs/elki/result/AbstractHierarchicalResult.java b/src/de/lmu/ifi/dbs/elki/result/AbstractHierarchicalResult.java
index 113779a1..f5e89e13 100644
--- a/src/de/lmu/ifi/dbs/elki/result/AbstractHierarchicalResult.java
+++ b/src/de/lmu/ifi/dbs/elki/result/AbstractHierarchicalResult.java
@@ -1,26 +1,28 @@
package de.lmu.ifi.dbs.elki.result;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
+
/**
* Abstract class for a result object with hierarchy
diff --git a/src/de/lmu/ifi/dbs/elki/result/AprioriResult.java b/src/de/lmu/ifi/dbs/elki/result/AprioriResult.java
index 3a8f2aec..cbd1acfa 100644
--- a/src/de/lmu/ifi/dbs/elki/result/AprioriResult.java
+++ b/src/de/lmu/ifi/dbs/elki/result/AprioriResult.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.result;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.BitSet;
import java.util.List;
diff --git a/src/de/lmu/ifi/dbs/elki/result/BasicResult.java b/src/de/lmu/ifi/dbs/elki/result/BasicResult.java
index dc0f048a..4aa46d0f 100644
--- a/src/de/lmu/ifi/dbs/elki/result/BasicResult.java
+++ b/src/de/lmu/ifi/dbs/elki/result/BasicResult.java
@@ -1,26 +1,28 @@
package de.lmu.ifi.dbs.elki.result;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
/**
* Basic class for a result. Much like AbstractHierarchicalResult, except it
diff --git a/src/de/lmu/ifi/dbs/elki/result/CollectionResult.java b/src/de/lmu/ifi/dbs/elki/result/CollectionResult.java
index eb6c3fe3..1ce10063 100644
--- a/src/de/lmu/ifi/dbs/elki/result/CollectionResult.java
+++ b/src/de/lmu/ifi/dbs/elki/result/CollectionResult.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.result;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.ArrayList;
import java.util.Collection;
diff --git a/src/de/lmu/ifi/dbs/elki/result/DiscardResultHandler.java b/src/de/lmu/ifi/dbs/elki/result/DiscardResultHandler.java
index a9f4a589..ee65e64e 100644
--- a/src/de/lmu/ifi/dbs/elki/result/DiscardResultHandler.java
+++ b/src/de/lmu/ifi/dbs/elki/result/DiscardResultHandler.java
@@ -1,26 +1,28 @@
package de.lmu.ifi.dbs.elki.result;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
+
/**
diff --git a/src/de/lmu/ifi/dbs/elki/result/HierarchicalResult.java b/src/de/lmu/ifi/dbs/elki/result/HierarchicalResult.java
index a604d287..4b5245b4 100644
--- a/src/de/lmu/ifi/dbs/elki/result/HierarchicalResult.java
+++ b/src/de/lmu/ifi/dbs/elki/result/HierarchicalResult.java
@@ -1,26 +1,28 @@
package de.lmu.ifi.dbs.elki.result;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
+
/**
* Result with an internal hierarchy.
diff --git a/src/de/lmu/ifi/dbs/elki/result/HistogramResult.java b/src/de/lmu/ifi/dbs/elki/result/HistogramResult.java
index 94c1ce7b..7a6da96b 100644
--- a/src/de/lmu/ifi/dbs/elki/result/HistogramResult.java
+++ b/src/de/lmu/ifi/dbs/elki/result/HistogramResult.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.result;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.Collection;
diff --git a/src/de/lmu/ifi/dbs/elki/result/IterableResult.java b/src/de/lmu/ifi/dbs/elki/result/IterableResult.java
index 4affcb25..b8bd27db 100644
--- a/src/de/lmu/ifi/dbs/elki/result/IterableResult.java
+++ b/src/de/lmu/ifi/dbs/elki/result/IterableResult.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.result;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.Iterator;
diff --git a/src/de/lmu/ifi/dbs/elki/result/KMLOutputHandler.java b/src/de/lmu/ifi/dbs/elki/result/KMLOutputHandler.java
index 2d456f8e..112ec7b8 100644
--- a/src/de/lmu/ifi/dbs/elki/result/KMLOutputHandler.java
+++ b/src/de/lmu/ifi/dbs/elki/result/KMLOutputHandler.java
@@ -1,28 +1,30 @@
package de.lmu.ifi.dbs.elki.result;
-/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.awt.Color;
+import java.awt.Desktop;
import java.io.File;
import java.io.FileOutputStream;
import java.io.IOException;
@@ -50,6 +52,7 @@ import de.lmu.ifi.dbs.elki.math.linearalgebra.Vector;
import de.lmu.ifi.dbs.elki.result.outlier.OutlierResult;
import de.lmu.ifi.dbs.elki.utilities.DatabaseUtil;
import de.lmu.ifi.dbs.elki.utilities.FormatUtil;
+import de.lmu.ifi.dbs.elki.utilities.documentation.Reference;
import de.lmu.ifi.dbs.elki.utilities.exceptions.AbortException;
import de.lmu.ifi.dbs.elki.utilities.optionhandling.AbstractParameterizer;
import de.lmu.ifi.dbs.elki.utilities.optionhandling.OptionID;
@@ -64,9 +67,18 @@ import de.lmu.ifi.dbs.elki.utilities.scaling.outlier.OutlierScalingFunction;
/**
* Class to handle KML output.
*
+ * Reference:
+ * <p>
+ * E. Achtert, A. Hettab, H.-P. Kriegel, E. Schubert, A. Zimek:<br />
+ * Spatial Outlier Detection: Data, Algorithms, Visualizations.<br />
+ * in Proc. 12th International Symposium on Spatial and Temporal Databases
+ * (SSTD), Minneapolis, MN, 2011
+ * </p>
+ *
* @author Erich Schubert
*/
// TODO: make configurable color scheme
+@Reference(authors = "E. Achtert, A. Hettab, H.-P. Kriegel, E. Schubert, A. Zimek", booktitle = "Proc. 12th International Symposium on Spatial and Temporal Databases (SSTD), Minneapolis, MN, 2011", title = "Spatial Outlier Detection: Data, Algorithms, Visualizations")
public class KMLOutputHandler implements ResultHandler, Parameterizable {
/**
* Logger class to use.
@@ -94,17 +106,24 @@ public class KMLOutputHandler implements ResultHandler, Parameterizable {
private boolean compat;
/**
+ * Automatically open at the end
+ */
+ private boolean autoopen;
+
+ /**
* Constructor.
*
* @param filename Output filename
* @param scaling Scaling function
* @param compat Compatibility mode
+ * @param autoopen Automatically open
*/
- public KMLOutputHandler(File filename, OutlierScalingFunction scaling, boolean compat) {
+ public KMLOutputHandler(File filename, OutlierScalingFunction scaling, boolean compat, boolean autoopen) {
super();
this.filename = filename;
this.scaling = scaling;
this.compat = compat;
+ this.autoopen = autoopen;
}
@Override
@@ -123,6 +142,9 @@ public class KMLOutputHandler implements ResultHandler, Parameterizable {
out.closeEntry();
out.flush();
out.close();
+ if(autoopen) {
+ Desktop.getDesktop().open(filename);
+ }
}
catch(XMLStreamException e) {
logger.exception(e);
@@ -367,6 +389,15 @@ public class KMLOutputHandler implements ResultHandler, Parameterizable {
public static final OptionID COMPAT_ID = OptionID.getOrCreateOptionID("kml.compat", "Use simpler KML objects, compatibility mode.");
/**
+ * Parameter for automatically opening the output file.
+ *
+ * <p>
+ * Key: {@code -kml.autoopen}
+ * </p>
+ */
+ public static final OptionID AUTOOPEN_ID = OptionID.getOrCreateOptionID("kml.autoopen", "Automatically open the result file.");
+
+ /**
* Output file name
*/
File filename;
@@ -381,6 +412,11 @@ public class KMLOutputHandler implements ResultHandler, Parameterizable {
*/
boolean compat;
+ /**
+ * Automatically open at the end
+ */
+ boolean autoopen = false;
+
@Override
protected void makeOptions(Parameterization config) {
super.makeOptions(config);
@@ -399,11 +435,16 @@ public class KMLOutputHandler implements ResultHandler, Parameterizable {
if(config.grab(compatF)) {
compat = compatF.getValue();
}
+
+ Flag autoopenF = new Flag(AUTOOPEN_ID);
+ if(config.grab(autoopenF)) {
+ autoopen = autoopenF.getValue();
+ }
}
@Override
protected KMLOutputHandler makeInstance() {
- return new KMLOutputHandler(filename, scaling, compat);
+ return new KMLOutputHandler(filename, scaling, compat, autoopen);
}
}
} \ No newline at end of file
diff --git a/src/de/lmu/ifi/dbs/elki/result/KNNDistanceOrderResult.java b/src/de/lmu/ifi/dbs/elki/result/KNNDistanceOrderResult.java
index 8958cac2..1f62c7bc 100644
--- a/src/de/lmu/ifi/dbs/elki/result/KNNDistanceOrderResult.java
+++ b/src/de/lmu/ifi/dbs/elki/result/KNNDistanceOrderResult.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.result;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.Iterator;
import java.util.List;
diff --git a/src/de/lmu/ifi/dbs/elki/result/OrderingResult.java b/src/de/lmu/ifi/dbs/elki/result/OrderingResult.java
index 57a30e16..043ec618 100644
--- a/src/de/lmu/ifi/dbs/elki/result/OrderingResult.java
+++ b/src/de/lmu/ifi/dbs/elki/result/OrderingResult.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.result;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.database.ids.DBID;
import de.lmu.ifi.dbs.elki.database.ids.DBIDs;
diff --git a/src/de/lmu/ifi/dbs/elki/result/PixmapResult.java b/src/de/lmu/ifi/dbs/elki/result/PixmapResult.java
index eae54ad6..ca832ecf 100644
--- a/src/de/lmu/ifi/dbs/elki/result/PixmapResult.java
+++ b/src/de/lmu/ifi/dbs/elki/result/PixmapResult.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.result;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.awt.image.RenderedImage;
import java.io.File;
diff --git a/src/de/lmu/ifi/dbs/elki/result/Result.java b/src/de/lmu/ifi/dbs/elki/result/Result.java
index c3fd32ec..3a90b7ce 100644
--- a/src/de/lmu/ifi/dbs/elki/result/Result.java
+++ b/src/de/lmu/ifi/dbs/elki/result/Result.java
@@ -1,26 +1,28 @@
package de.lmu.ifi.dbs.elki.result;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
+
/**
* Interface for arbitrary result objects.
diff --git a/src/de/lmu/ifi/dbs/elki/result/ResultAdapter.java b/src/de/lmu/ifi/dbs/elki/result/ResultAdapter.java
index 8dca01dc..bdadd2d9 100644
--- a/src/de/lmu/ifi/dbs/elki/result/ResultAdapter.java
+++ b/src/de/lmu/ifi/dbs/elki/result/ResultAdapter.java
@@ -1,26 +1,28 @@
package de.lmu.ifi.dbs.elki.result;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
/**
* Marker interface for trivial "adapter" type of results.
diff --git a/src/de/lmu/ifi/dbs/elki/result/ResultHandler.java b/src/de/lmu/ifi/dbs/elki/result/ResultHandler.java
index 236dda40..04532ec9 100644
--- a/src/de/lmu/ifi/dbs/elki/result/ResultHandler.java
+++ b/src/de/lmu/ifi/dbs/elki/result/ResultHandler.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.result;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.utilities.optionhandling.Parameterizable;
diff --git a/src/de/lmu/ifi/dbs/elki/result/ResultHierarchy.java b/src/de/lmu/ifi/dbs/elki/result/ResultHierarchy.java
index 20a681bb..101d6855 100644
--- a/src/de/lmu/ifi/dbs/elki/result/ResultHierarchy.java
+++ b/src/de/lmu/ifi/dbs/elki/result/ResultHierarchy.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.result;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.List;
diff --git a/src/de/lmu/ifi/dbs/elki/result/ResultListener.java b/src/de/lmu/ifi/dbs/elki/result/ResultListener.java
index 2a79dd87..9dca067f 100644
--- a/src/de/lmu/ifi/dbs/elki/result/ResultListener.java
+++ b/src/de/lmu/ifi/dbs/elki/result/ResultListener.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.result;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.EventListener;
diff --git a/src/de/lmu/ifi/dbs/elki/result/ResultProcessor.java b/src/de/lmu/ifi/dbs/elki/result/ResultProcessor.java
index 1c220c4e..6590b736 100644
--- a/src/de/lmu/ifi/dbs/elki/result/ResultProcessor.java
+++ b/src/de/lmu/ifi/dbs/elki/result/ResultProcessor.java
@@ -1,26 +1,28 @@
package de.lmu.ifi.dbs.elki.result;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
+
/**
diff --git a/src/de/lmu/ifi/dbs/elki/result/ResultUtil.java b/src/de/lmu/ifi/dbs/elki/result/ResultUtil.java
index 20b1a0be..96cfe9f4 100644
--- a/src/de/lmu/ifi/dbs/elki/result/ResultUtil.java
+++ b/src/de/lmu/ifi/dbs/elki/result/ResultUtil.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.result;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.ArrayList;
import java.util.Collection;
diff --git a/src/de/lmu/ifi/dbs/elki/result/ResultWriter.java b/src/de/lmu/ifi/dbs/elki/result/ResultWriter.java
index cc3e0f5a..14e64269 100644
--- a/src/de/lmu/ifi/dbs/elki/result/ResultWriter.java
+++ b/src/de/lmu/ifi/dbs/elki/result/ResultWriter.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.result;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.io.File;
import java.io.IOException;
diff --git a/src/de/lmu/ifi/dbs/elki/result/SelectionResult.java b/src/de/lmu/ifi/dbs/elki/result/SelectionResult.java
index b4b1de43..d3bb2fd4 100644
--- a/src/de/lmu/ifi/dbs/elki/result/SelectionResult.java
+++ b/src/de/lmu/ifi/dbs/elki/result/SelectionResult.java
@@ -1,26 +1,28 @@
package de.lmu.ifi.dbs.elki.result;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
/**
diff --git a/src/de/lmu/ifi/dbs/elki/result/SettingsResult.java b/src/de/lmu/ifi/dbs/elki/result/SettingsResult.java
index 71e678ca..044ceaf4 100644
--- a/src/de/lmu/ifi/dbs/elki/result/SettingsResult.java
+++ b/src/de/lmu/ifi/dbs/elki/result/SettingsResult.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.result;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.Collection;
diff --git a/src/de/lmu/ifi/dbs/elki/result/optics/ClusterOrderEntry.java b/src/de/lmu/ifi/dbs/elki/result/optics/ClusterOrderEntry.java
index 6dd42e2d..62d54045 100644
--- a/src/de/lmu/ifi/dbs/elki/result/optics/ClusterOrderEntry.java
+++ b/src/de/lmu/ifi/dbs/elki/result/optics/ClusterOrderEntry.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.result.optics;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.database.ids.DBID;
import de.lmu.ifi.dbs.elki.distance.distancevalue.Distance;
diff --git a/src/de/lmu/ifi/dbs/elki/result/optics/ClusterOrderResult.java b/src/de/lmu/ifi/dbs/elki/result/optics/ClusterOrderResult.java
index d135f53e..9c5c6cdd 100644
--- a/src/de/lmu/ifi/dbs/elki/result/optics/ClusterOrderResult.java
+++ b/src/de/lmu/ifi/dbs/elki/result/optics/ClusterOrderResult.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.result.optics;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.ArrayList;
import java.util.HashMap;
diff --git a/src/de/lmu/ifi/dbs/elki/result/optics/DoubleDistanceClusterOrderEntry.java b/src/de/lmu/ifi/dbs/elki/result/optics/DoubleDistanceClusterOrderEntry.java
index fe3c24bb..018c1d4f 100644
--- a/src/de/lmu/ifi/dbs/elki/result/optics/DoubleDistanceClusterOrderEntry.java
+++ b/src/de/lmu/ifi/dbs/elki/result/optics/DoubleDistanceClusterOrderEntry.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.result.optics;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.database.ids.DBID;
import de.lmu.ifi.dbs.elki.distance.distancevalue.DoubleDistance;
diff --git a/src/de/lmu/ifi/dbs/elki/result/optics/GenericClusterOrderEntry.java b/src/de/lmu/ifi/dbs/elki/result/optics/GenericClusterOrderEntry.java
index d20ee35b..8813a82a 100644
--- a/src/de/lmu/ifi/dbs/elki/result/optics/GenericClusterOrderEntry.java
+++ b/src/de/lmu/ifi/dbs/elki/result/optics/GenericClusterOrderEntry.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.result.optics;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.database.ids.DBID;
import de.lmu.ifi.dbs.elki.distance.distancevalue.Distance;
diff --git a/src/de/lmu/ifi/dbs/elki/result/outlier/BasicOutlierScoreMeta.java b/src/de/lmu/ifi/dbs/elki/result/outlier/BasicOutlierScoreMeta.java
index 0ea4e921..09aa8dbf 100644
--- a/src/de/lmu/ifi/dbs/elki/result/outlier/BasicOutlierScoreMeta.java
+++ b/src/de/lmu/ifi/dbs/elki/result/outlier/BasicOutlierScoreMeta.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.result.outlier;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.logging.Logging;
diff --git a/src/de/lmu/ifi/dbs/elki/result/outlier/InvertedOutlierScoreMeta.java b/src/de/lmu/ifi/dbs/elki/result/outlier/InvertedOutlierScoreMeta.java
index 6fd66bb8..2c978bf2 100644
--- a/src/de/lmu/ifi/dbs/elki/result/outlier/InvertedOutlierScoreMeta.java
+++ b/src/de/lmu/ifi/dbs/elki/result/outlier/InvertedOutlierScoreMeta.java
@@ -1,26 +1,28 @@
package de.lmu.ifi.dbs.elki.result.outlier;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
/**
* Class to signal a value-inverted outlier score, i.e. low values are outliers.
diff --git a/src/de/lmu/ifi/dbs/elki/result/outlier/OrderingFromRelation.java b/src/de/lmu/ifi/dbs/elki/result/outlier/OrderingFromRelation.java
index d4aa0cf7..ff211f30 100644
--- a/src/de/lmu/ifi/dbs/elki/result/outlier/OrderingFromRelation.java
+++ b/src/de/lmu/ifi/dbs/elki/result/outlier/OrderingFromRelation.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.result.outlier;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.Collections;
import java.util.Comparator;
diff --git a/src/de/lmu/ifi/dbs/elki/result/outlier/OutlierResult.java b/src/de/lmu/ifi/dbs/elki/result/outlier/OutlierResult.java
index ba8239ec..cafe4958 100644
--- a/src/de/lmu/ifi/dbs/elki/result/outlier/OutlierResult.java
+++ b/src/de/lmu/ifi/dbs/elki/result/outlier/OutlierResult.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.result.outlier;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.database.relation.Relation;
import de.lmu.ifi.dbs.elki.result.BasicResult;
diff --git a/src/de/lmu/ifi/dbs/elki/result/outlier/OutlierScoreMeta.java b/src/de/lmu/ifi/dbs/elki/result/outlier/OutlierScoreMeta.java
index da65f254..fa7fb796 100644
--- a/src/de/lmu/ifi/dbs/elki/result/outlier/OutlierScoreMeta.java
+++ b/src/de/lmu/ifi/dbs/elki/result/outlier/OutlierScoreMeta.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.result.outlier;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.result.Result;
diff --git a/src/de/lmu/ifi/dbs/elki/result/outlier/ProbabilisticOutlierScore.java b/src/de/lmu/ifi/dbs/elki/result/outlier/ProbabilisticOutlierScore.java
index 0f078a54..65ef6f82 100644
--- a/src/de/lmu/ifi/dbs/elki/result/outlier/ProbabilisticOutlierScore.java
+++ b/src/de/lmu/ifi/dbs/elki/result/outlier/ProbabilisticOutlierScore.java
@@ -1,26 +1,28 @@
package de.lmu.ifi.dbs.elki.result.outlier;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
+
/**
* Outlier score that is a probability value in the range 0.0 - 1.0
diff --git a/src/de/lmu/ifi/dbs/elki/result/outlier/QuotientOutlierScoreMeta.java b/src/de/lmu/ifi/dbs/elki/result/outlier/QuotientOutlierScoreMeta.java
index ef477b34..2cf9875e 100644
--- a/src/de/lmu/ifi/dbs/elki/result/outlier/QuotientOutlierScoreMeta.java
+++ b/src/de/lmu/ifi/dbs/elki/result/outlier/QuotientOutlierScoreMeta.java
@@ -1,26 +1,28 @@
package de.lmu.ifi.dbs.elki.result.outlier;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
/**
diff --git a/src/de/lmu/ifi/dbs/elki/result/textwriter/MultipleFilesOutput.java b/src/de/lmu/ifi/dbs/elki/result/textwriter/MultipleFilesOutput.java
index 91bdc959..51eb5f8e 100644
--- a/src/de/lmu/ifi/dbs/elki/result/textwriter/MultipleFilesOutput.java
+++ b/src/de/lmu/ifi/dbs/elki/result/textwriter/MultipleFilesOutput.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.result.textwriter;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.io.File;
import java.io.FileOutputStream;
diff --git a/src/de/lmu/ifi/dbs/elki/result/textwriter/SingleStreamOutput.java b/src/de/lmu/ifi/dbs/elki/result/textwriter/SingleStreamOutput.java
index 1ec93091..1e4e5773 100644
--- a/src/de/lmu/ifi/dbs/elki/result/textwriter/SingleStreamOutput.java
+++ b/src/de/lmu/ifi/dbs/elki/result/textwriter/SingleStreamOutput.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.result.textwriter;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.io.File;
import java.io.FileDescriptor;
diff --git a/src/de/lmu/ifi/dbs/elki/result/textwriter/StreamFactory.java b/src/de/lmu/ifi/dbs/elki/result/textwriter/StreamFactory.java
index a769f6c8..1656d76d 100644
--- a/src/de/lmu/ifi/dbs/elki/result/textwriter/StreamFactory.java
+++ b/src/de/lmu/ifi/dbs/elki/result/textwriter/StreamFactory.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.result.textwriter;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.io.IOException;
import java.io.PrintStream;
diff --git a/src/de/lmu/ifi/dbs/elki/result/textwriter/TextWriteable.java b/src/de/lmu/ifi/dbs/elki/result/textwriter/TextWriteable.java
index 84d18c40..ffc522eb 100644
--- a/src/de/lmu/ifi/dbs/elki/result/textwriter/TextWriteable.java
+++ b/src/de/lmu/ifi/dbs/elki/result/textwriter/TextWriteable.java
@@ -1,26 +1,28 @@
package de.lmu.ifi.dbs.elki.result.textwriter;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
/**
* Interface for objects providing a text serialization suitable for
diff --git a/src/de/lmu/ifi/dbs/elki/result/textwriter/TextWriter.java b/src/de/lmu/ifi/dbs/elki/result/textwriter/TextWriter.java
index e6fac1f8..743e787f 100644
--- a/src/de/lmu/ifi/dbs/elki/result/textwriter/TextWriter.java
+++ b/src/de/lmu/ifi/dbs/elki/result/textwriter/TextWriter.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.result.textwriter;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.io.FileNotFoundException;
import java.io.IOException;
diff --git a/src/de/lmu/ifi/dbs/elki/result/textwriter/TextWriterStream.java b/src/de/lmu/ifi/dbs/elki/result/textwriter/TextWriterStream.java
index 9d50311f..b59a09e9 100644
--- a/src/de/lmu/ifi/dbs/elki/result/textwriter/TextWriterStream.java
+++ b/src/de/lmu/ifi/dbs/elki/result/textwriter/TextWriterStream.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.result.textwriter;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.io.PrintStream;
diff --git a/src/de/lmu/ifi/dbs/elki/result/textwriter/TextWriterWriterInterface.java b/src/de/lmu/ifi/dbs/elki/result/textwriter/TextWriterWriterInterface.java
index 71f8cf12..ab572896 100644
--- a/src/de/lmu/ifi/dbs/elki/result/textwriter/TextWriterWriterInterface.java
+++ b/src/de/lmu/ifi/dbs/elki/result/textwriter/TextWriterWriterInterface.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.result.textwriter;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.io.IOException;
diff --git a/src/de/lmu/ifi/dbs/elki/result/textwriter/naming/NamingScheme.java b/src/de/lmu/ifi/dbs/elki/result/textwriter/naming/NamingScheme.java
index 5d885b35..c5d9cf72 100644
--- a/src/de/lmu/ifi/dbs/elki/result/textwriter/naming/NamingScheme.java
+++ b/src/de/lmu/ifi/dbs/elki/result/textwriter/naming/NamingScheme.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.result.textwriter.naming;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.data.Cluster;
diff --git a/src/de/lmu/ifi/dbs/elki/result/textwriter/naming/SimpleEnumeratingScheme.java b/src/de/lmu/ifi/dbs/elki/result/textwriter/naming/SimpleEnumeratingScheme.java
index 102a017f..2341f258 100644
--- a/src/de/lmu/ifi/dbs/elki/result/textwriter/naming/SimpleEnumeratingScheme.java
+++ b/src/de/lmu/ifi/dbs/elki/result/textwriter/naming/SimpleEnumeratingScheme.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.result.textwriter.naming;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.HashMap;
import java.util.Map;
diff --git a/src/de/lmu/ifi/dbs/elki/result/textwriter/writers/TextWriterObjectArray.java b/src/de/lmu/ifi/dbs/elki/result/textwriter/writers/TextWriterObjectArray.java
index 2ab3428c..bec183d8 100644
--- a/src/de/lmu/ifi/dbs/elki/result/textwriter/writers/TextWriterObjectArray.java
+++ b/src/de/lmu/ifi/dbs/elki/result/textwriter/writers/TextWriterObjectArray.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.result.textwriter.writers;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.result.textwriter.TextWriterStream;
import de.lmu.ifi.dbs.elki.result.textwriter.TextWriterWriterInterface;
diff --git a/src/de/lmu/ifi/dbs/elki/result/textwriter/writers/TextWriterObjectComment.java b/src/de/lmu/ifi/dbs/elki/result/textwriter/writers/TextWriterObjectComment.java
index 05b6db0d..ddb753ac 100644
--- a/src/de/lmu/ifi/dbs/elki/result/textwriter/writers/TextWriterObjectComment.java
+++ b/src/de/lmu/ifi/dbs/elki/result/textwriter/writers/TextWriterObjectComment.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.result.textwriter.writers;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.result.textwriter.TextWriterStream;
import de.lmu.ifi.dbs.elki.result.textwriter.TextWriterWriterInterface;
diff --git a/src/de/lmu/ifi/dbs/elki/result/textwriter/writers/TextWriterObjectInline.java b/src/de/lmu/ifi/dbs/elki/result/textwriter/writers/TextWriterObjectInline.java
index e327cc8f..12717da7 100644
--- a/src/de/lmu/ifi/dbs/elki/result/textwriter/writers/TextWriterObjectInline.java
+++ b/src/de/lmu/ifi/dbs/elki/result/textwriter/writers/TextWriterObjectInline.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.result.textwriter.writers;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.result.textwriter.TextWriterStream;
import de.lmu.ifi.dbs.elki.result.textwriter.TextWriterWriterInterface;
diff --git a/src/de/lmu/ifi/dbs/elki/result/textwriter/writers/TextWriterPair.java b/src/de/lmu/ifi/dbs/elki/result/textwriter/writers/TextWriterPair.java
index 3566f94a..c8bd83b2 100644
--- a/src/de/lmu/ifi/dbs/elki/result/textwriter/writers/TextWriterPair.java
+++ b/src/de/lmu/ifi/dbs/elki/result/textwriter/writers/TextWriterPair.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.result.textwriter.writers;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.io.IOException;
diff --git a/src/de/lmu/ifi/dbs/elki/result/textwriter/writers/TextWriterTextWriteable.java b/src/de/lmu/ifi/dbs/elki/result/textwriter/writers/TextWriterTextWriteable.java
index 29a5abb2..491f803d 100644
--- a/src/de/lmu/ifi/dbs/elki/result/textwriter/writers/TextWriterTextWriteable.java
+++ b/src/de/lmu/ifi/dbs/elki/result/textwriter/writers/TextWriterTextWriteable.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.result.textwriter.writers;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.result.textwriter.TextWriteable;
import de.lmu.ifi.dbs.elki.result.textwriter.TextWriterStream;
diff --git a/src/de/lmu/ifi/dbs/elki/result/textwriter/writers/TextWriterTriple.java b/src/de/lmu/ifi/dbs/elki/result/textwriter/writers/TextWriterTriple.java
index 1fb1025e..ce3c3d70 100644
--- a/src/de/lmu/ifi/dbs/elki/result/textwriter/writers/TextWriterTriple.java
+++ b/src/de/lmu/ifi/dbs/elki/result/textwriter/writers/TextWriterTriple.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.result.textwriter.writers;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.io.IOException;
diff --git a/src/de/lmu/ifi/dbs/elki/result/textwriter/writers/TextWriterVector.java b/src/de/lmu/ifi/dbs/elki/result/textwriter/writers/TextWriterVector.java
index ef708f8e..0ebf4ae4 100644
--- a/src/de/lmu/ifi/dbs/elki/result/textwriter/writers/TextWriterVector.java
+++ b/src/de/lmu/ifi/dbs/elki/result/textwriter/writers/TextWriterVector.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.result.textwriter.writers;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.math.linearalgebra.Vector;
import de.lmu.ifi.dbs.elki.result.textwriter.TextWriterStream;
diff --git a/src/de/lmu/ifi/dbs/elki/utilities/ClassGenericsUtil.java b/src/de/lmu/ifi/dbs/elki/utilities/ClassGenericsUtil.java
index 5ddd3875..2c81fbf9 100644
--- a/src/de/lmu/ifi/dbs/elki/utilities/ClassGenericsUtil.java
+++ b/src/de/lmu/ifi/dbs/elki/utilities/ClassGenericsUtil.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.utilities;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.lang.reflect.Constructor;
import java.lang.reflect.InvocationTargetException;
diff --git a/src/de/lmu/ifi/dbs/elki/utilities/ConstantObject.java b/src/de/lmu/ifi/dbs/elki/utilities/ConstantObject.java
index acc6e31f..6d8f2f78 100644
--- a/src/de/lmu/ifi/dbs/elki/utilities/ConstantObject.java
+++ b/src/de/lmu/ifi/dbs/elki/utilities/ConstantObject.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.utilities;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.HashMap;
import java.util.Map;
diff --git a/src/de/lmu/ifi/dbs/elki/utilities/DatabaseUtil.java b/src/de/lmu/ifi/dbs/elki/utilities/DatabaseUtil.java
index ffb539ce..199c1048 100644
--- a/src/de/lmu/ifi/dbs/elki/utilities/DatabaseUtil.java
+++ b/src/de/lmu/ifi/dbs/elki/utilities/DatabaseUtil.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.utilities;
-/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.AbstractCollection;
import java.util.ArrayList;
@@ -530,6 +531,23 @@ public final class DatabaseUtil {
}
/**
+ * Get the column name or produce a generic label "Column XY".
+ *
+ * @param rel Relation
+ * @param col Column
+ * @return Label
+ */
+ public static <V extends FeatureVector<?, ?>> String getColumnLabel(Relation<? extends V> rel, int col) {
+ String lbl = assumeVectorField(rel).getLabel(col);
+ if(lbl != null) {
+ return lbl;
+ }
+ else {
+ return "Column " + col;
+ }
+ }
+
+ /**
* Iterator class that retrieves the given objects from the database.
*
* @author Erich Schubert
diff --git a/src/de/lmu/ifi/dbs/elki/utilities/FileUtil.java b/src/de/lmu/ifi/dbs/elki/utilities/FileUtil.java
index 776c9206..5d2a6a83 100644
--- a/src/de/lmu/ifi/dbs/elki/utilities/FileUtil.java
+++ b/src/de/lmu/ifi/dbs/elki/utilities/FileUtil.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.utilities;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.io.File;
import java.io.FileInputStream;
diff --git a/src/de/lmu/ifi/dbs/elki/utilities/FormatUtil.java b/src/de/lmu/ifi/dbs/elki/utilities/FormatUtil.java
index 9545e25a..e26a9a49 100644
--- a/src/de/lmu/ifi/dbs/elki/utilities/FormatUtil.java
+++ b/src/de/lmu/ifi/dbs/elki/utilities/FormatUtil.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.utilities;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.text.DecimalFormat;
import java.text.DecimalFormatSymbols;
diff --git a/src/de/lmu/ifi/dbs/elki/utilities/HandlerList.java b/src/de/lmu/ifi/dbs/elki/utilities/HandlerList.java
index 478f4f10..02630233 100644
--- a/src/de/lmu/ifi/dbs/elki/utilities/HandlerList.java
+++ b/src/de/lmu/ifi/dbs/elki/utilities/HandlerList.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.utilities;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.ArrayList;
import java.util.ListIterator;
diff --git a/src/de/lmu/ifi/dbs/elki/utilities/InspectionUtil.java b/src/de/lmu/ifi/dbs/elki/utilities/InspectionUtil.java
index e3cfe895..67dad564 100644
--- a/src/de/lmu/ifi/dbs/elki/utilities/InspectionUtil.java
+++ b/src/de/lmu/ifi/dbs/elki/utilities/InspectionUtil.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.utilities;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.io.File;
import java.io.IOException;
diff --git a/src/de/lmu/ifi/dbs/elki/utilities/InspectionUtilFrequentlyScanned.java b/src/de/lmu/ifi/dbs/elki/utilities/InspectionUtilFrequentlyScanned.java
index e43433f7..b666e077 100644
--- a/src/de/lmu/ifi/dbs/elki/utilities/InspectionUtilFrequentlyScanned.java
+++ b/src/de/lmu/ifi/dbs/elki/utilities/InspectionUtilFrequentlyScanned.java
@@ -1,26 +1,28 @@
package de.lmu.ifi.dbs.elki.utilities;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
/**
* Marker interface for classes that are frequently scanned for by the UI
diff --git a/src/de/lmu/ifi/dbs/elki/utilities/QueryStatistic.java b/src/de/lmu/ifi/dbs/elki/utilities/QueryStatistic.java
index ad33f77f..b5afc32b 100644
--- a/src/de/lmu/ifi/dbs/elki/utilities/QueryStatistic.java
+++ b/src/de/lmu/ifi/dbs/elki/utilities/QueryStatistic.java
@@ -1,26 +1,28 @@
package de.lmu.ifi.dbs.elki.utilities;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
/**
* Provides some statistics about queries
diff --git a/src/de/lmu/ifi/dbs/elki/utilities/Util.java b/src/de/lmu/ifi/dbs/elki/utilities/Util.java
index abd3220c..639c0d64 100644
--- a/src/de/lmu/ifi/dbs/elki/utilities/Util.java
+++ b/src/de/lmu/ifi/dbs/elki/utilities/Util.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.utilities;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.io.PrintStream;
import java.util.AbstractCollection;
diff --git a/src/de/lmu/ifi/dbs/elki/utilities/datastructures/AnyMap.java b/src/de/lmu/ifi/dbs/elki/utilities/datastructures/AnyMap.java
index 7062bd2a..9e1307be 100644
--- a/src/de/lmu/ifi/dbs/elki/utilities/datastructures/AnyMap.java
+++ b/src/de/lmu/ifi/dbs/elki/utilities/datastructures/AnyMap.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.utilities.datastructures;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.HashMap;
diff --git a/src/de/lmu/ifi/dbs/elki/utilities/datastructures/HashMapList.java b/src/de/lmu/ifi/dbs/elki/utilities/datastructures/HashMapList.java
index 7642a0b3..7c5c950b 100644
--- a/src/de/lmu/ifi/dbs/elki/utilities/datastructures/HashMapList.java
+++ b/src/de/lmu/ifi/dbs/elki/utilities/datastructures/HashMapList.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.utilities.datastructures;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.ArrayList;
import java.util.HashMap;
diff --git a/src/de/lmu/ifi/dbs/elki/utilities/datastructures/heap/Heap.java b/src/de/lmu/ifi/dbs/elki/utilities/datastructures/heap/Heap.java
index eb41fc68..307e3ecc 100644
--- a/src/de/lmu/ifi/dbs/elki/utilities/datastructures/heap/Heap.java
+++ b/src/de/lmu/ifi/dbs/elki/utilities/datastructures/heap/Heap.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.utilities.datastructures.heap;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.io.Serializable;
import java.util.AbstractQueue;
diff --git a/src/de/lmu/ifi/dbs/elki/utilities/datastructures/heap/IntegerPriorityObject.java b/src/de/lmu/ifi/dbs/elki/utilities/datastructures/heap/IntegerPriorityObject.java
index 5490044f..0bfa8a90 100644
--- a/src/de/lmu/ifi/dbs/elki/utilities/datastructures/heap/IntegerPriorityObject.java
+++ b/src/de/lmu/ifi/dbs/elki/utilities/datastructures/heap/IntegerPriorityObject.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.utilities.datastructures.heap;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.utilities.pairs.PairInterface;
diff --git a/src/de/lmu/ifi/dbs/elki/utilities/datastructures/heap/KNNHeap.java b/src/de/lmu/ifi/dbs/elki/utilities/datastructures/heap/KNNHeap.java
index f1ddad53..9f2d29f3 100644
--- a/src/de/lmu/ifi/dbs/elki/utilities/datastructures/heap/KNNHeap.java
+++ b/src/de/lmu/ifi/dbs/elki/utilities/datastructures/heap/KNNHeap.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.utilities.datastructures.heap;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.ArrayList;
import java.util.Collections;
diff --git a/src/de/lmu/ifi/dbs/elki/utilities/datastructures/heap/KNNList.java b/src/de/lmu/ifi/dbs/elki/utilities/datastructures/heap/KNNList.java
index 05ded96e..8e0e2372 100644
--- a/src/de/lmu/ifi/dbs/elki/utilities/datastructures/heap/KNNList.java
+++ b/src/de/lmu/ifi/dbs/elki/utilities/datastructures/heap/KNNList.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.utilities.datastructures.heap;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.AbstractList;
import java.util.ArrayList;
diff --git a/src/de/lmu/ifi/dbs/elki/utilities/datastructures/heap/TiedTopBoundedHeap.java b/src/de/lmu/ifi/dbs/elki/utilities/datastructures/heap/TiedTopBoundedHeap.java
index 01daa0bb..ba4307b1 100644
--- a/src/de/lmu/ifi/dbs/elki/utilities/datastructures/heap/TiedTopBoundedHeap.java
+++ b/src/de/lmu/ifi/dbs/elki/utilities/datastructures/heap/TiedTopBoundedHeap.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.utilities.datastructures.heap;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.Comparator;
import java.util.Iterator;
diff --git a/src/de/lmu/ifi/dbs/elki/utilities/datastructures/heap/TopBoundedHeap.java b/src/de/lmu/ifi/dbs/elki/utilities/datastructures/heap/TopBoundedHeap.java
index 09083bf3..cd7280a5 100644
--- a/src/de/lmu/ifi/dbs/elki/utilities/datastructures/heap/TopBoundedHeap.java
+++ b/src/de/lmu/ifi/dbs/elki/utilities/datastructures/heap/TopBoundedHeap.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.utilities.datastructures.heap;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.Comparator;
diff --git a/src/de/lmu/ifi/dbs/elki/utilities/datastructures/heap/UpdatableHeap.java b/src/de/lmu/ifi/dbs/elki/utilities/datastructures/heap/UpdatableHeap.java
index 78f2a0f7..0ccacadc 100644
--- a/src/de/lmu/ifi/dbs/elki/utilities/datastructures/heap/UpdatableHeap.java
+++ b/src/de/lmu/ifi/dbs/elki/utilities/datastructures/heap/UpdatableHeap.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.utilities.datastructures.heap;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.Comparator;
import java.util.HashMap;
diff --git a/src/de/lmu/ifi/dbs/elki/utilities/datastructures/hierarchy/Hierarchical.java b/src/de/lmu/ifi/dbs/elki/utilities/datastructures/hierarchy/Hierarchical.java
index 48632de7..1bd9b430 100644
--- a/src/de/lmu/ifi/dbs/elki/utilities/datastructures/hierarchy/Hierarchical.java
+++ b/src/de/lmu/ifi/dbs/elki/utilities/datastructures/hierarchy/Hierarchical.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.utilities.datastructures.hierarchy;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.List;
diff --git a/src/de/lmu/ifi/dbs/elki/utilities/datastructures/hierarchy/Hierarchy.java b/src/de/lmu/ifi/dbs/elki/utilities/datastructures/hierarchy/Hierarchy.java
index 09299273..94a6c708 100644
--- a/src/de/lmu/ifi/dbs/elki/utilities/datastructures/hierarchy/Hierarchy.java
+++ b/src/de/lmu/ifi/dbs/elki/utilities/datastructures/hierarchy/Hierarchy.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.utilities.datastructures.hierarchy;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.List;
diff --git a/src/de/lmu/ifi/dbs/elki/utilities/datastructures/hierarchy/HierarchyHashmapList.java b/src/de/lmu/ifi/dbs/elki/utilities/datastructures/hierarchy/HierarchyHashmapList.java
index 8586115d..1b2dd0fa 100644
--- a/src/de/lmu/ifi/dbs/elki/utilities/datastructures/hierarchy/HierarchyHashmapList.java
+++ b/src/de/lmu/ifi/dbs/elki/utilities/datastructures/hierarchy/HierarchyHashmapList.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.utilities.datastructures.hierarchy;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.Collections;
import java.util.HashMap;
diff --git a/src/de/lmu/ifi/dbs/elki/utilities/datastructures/hierarchy/HierarchyReferenceLists.java b/src/de/lmu/ifi/dbs/elki/utilities/datastructures/hierarchy/HierarchyReferenceLists.java
index 1004593e..c2185dc9 100644
--- a/src/de/lmu/ifi/dbs/elki/utilities/datastructures/hierarchy/HierarchyReferenceLists.java
+++ b/src/de/lmu/ifi/dbs/elki/utilities/datastructures/hierarchy/HierarchyReferenceLists.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.utilities.datastructures.hierarchy;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.Iterator;
import java.util.List;
diff --git a/src/de/lmu/ifi/dbs/elki/utilities/datastructures/hierarchy/ModifiableHierarchy.java b/src/de/lmu/ifi/dbs/elki/utilities/datastructures/hierarchy/ModifiableHierarchy.java
index 77e85524..9faaf189 100644
--- a/src/de/lmu/ifi/dbs/elki/utilities/datastructures/hierarchy/ModifiableHierarchy.java
+++ b/src/de/lmu/ifi/dbs/elki/utilities/datastructures/hierarchy/ModifiableHierarchy.java
@@ -1,26 +1,28 @@
package de.lmu.ifi.dbs.elki.utilities.datastructures.hierarchy;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
+
/**
diff --git a/src/de/lmu/ifi/dbs/elki/utilities/designpattern/Observable.java b/src/de/lmu/ifi/dbs/elki/utilities/designpattern/Observable.java
index f9c40769..82e56164 100644
--- a/src/de/lmu/ifi/dbs/elki/utilities/designpattern/Observable.java
+++ b/src/de/lmu/ifi/dbs/elki/utilities/designpattern/Observable.java
@@ -1,26 +1,28 @@
package de.lmu.ifi.dbs.elki.utilities.designpattern;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
/**
* Observable design pattern.
diff --git a/src/de/lmu/ifi/dbs/elki/utilities/designpattern/Observer.java b/src/de/lmu/ifi/dbs/elki/utilities/designpattern/Observer.java
index eaead02b..3fab4ca2 100644
--- a/src/de/lmu/ifi/dbs/elki/utilities/designpattern/Observer.java
+++ b/src/de/lmu/ifi/dbs/elki/utilities/designpattern/Observer.java
@@ -1,26 +1,28 @@
package de.lmu.ifi.dbs.elki.utilities.designpattern;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
/**
* Simple Observer design pattern.
diff --git a/src/de/lmu/ifi/dbs/elki/utilities/designpattern/Observers.java b/src/de/lmu/ifi/dbs/elki/utilities/designpattern/Observers.java
index cfbf486c..fef6b95c 100644
--- a/src/de/lmu/ifi/dbs/elki/utilities/designpattern/Observers.java
+++ b/src/de/lmu/ifi/dbs/elki/utilities/designpattern/Observers.java
@@ -1,26 +1,28 @@
package de.lmu.ifi.dbs.elki.utilities.designpattern;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
/**
* Class to manage the observers of an instance.
diff --git a/src/de/lmu/ifi/dbs/elki/utilities/documentation/Description.java b/src/de/lmu/ifi/dbs/elki/utilities/documentation/Description.java
index f34aac80..cd9231b1 100644
--- a/src/de/lmu/ifi/dbs/elki/utilities/documentation/Description.java
+++ b/src/de/lmu/ifi/dbs/elki/utilities/documentation/Description.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.utilities.documentation;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.lang.annotation.Documented;
import java.lang.annotation.ElementType;
diff --git a/src/de/lmu/ifi/dbs/elki/utilities/documentation/DocumentationUtil.java b/src/de/lmu/ifi/dbs/elki/utilities/documentation/DocumentationUtil.java
index 118cad30..05859325 100644
--- a/src/de/lmu/ifi/dbs/elki/utilities/documentation/DocumentationUtil.java
+++ b/src/de/lmu/ifi/dbs/elki/utilities/documentation/DocumentationUtil.java
@@ -1,26 +1,28 @@
package de.lmu.ifi.dbs.elki.utilities.documentation;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
/**
* Utilities for extracting documentation from class annotations.
diff --git a/src/de/lmu/ifi/dbs/elki/utilities/documentation/Reference.java b/src/de/lmu/ifi/dbs/elki/utilities/documentation/Reference.java
index 2f6cd8d2..8b685cf3 100644
--- a/src/de/lmu/ifi/dbs/elki/utilities/documentation/Reference.java
+++ b/src/de/lmu/ifi/dbs/elki/utilities/documentation/Reference.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.utilities.documentation;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.lang.annotation.Documented;
import java.lang.annotation.ElementType;
diff --git a/src/de/lmu/ifi/dbs/elki/utilities/documentation/Title.java b/src/de/lmu/ifi/dbs/elki/utilities/documentation/Title.java
index a3eaf4dd..fc6199ae 100644
--- a/src/de/lmu/ifi/dbs/elki/utilities/documentation/Title.java
+++ b/src/de/lmu/ifi/dbs/elki/utilities/documentation/Title.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.utilities.documentation;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.lang.annotation.Documented;
import java.lang.annotation.ElementType;
diff --git a/src/de/lmu/ifi/dbs/elki/utilities/exceptions/APIViolationException.java b/src/de/lmu/ifi/dbs/elki/utilities/exceptions/APIViolationException.java
index 72116d32..37fd0c6a 100644
--- a/src/de/lmu/ifi/dbs/elki/utilities/exceptions/APIViolationException.java
+++ b/src/de/lmu/ifi/dbs/elki/utilities/exceptions/APIViolationException.java
@@ -1,26 +1,28 @@
package de.lmu.ifi.dbs.elki.utilities.exceptions;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
+
/**
* This class indicates an exception likely caused by an API not implemented
diff --git a/src/de/lmu/ifi/dbs/elki/utilities/exceptions/AbortException.java b/src/de/lmu/ifi/dbs/elki/utilities/exceptions/AbortException.java
index 71e56c5d..3025e8e7 100644
--- a/src/de/lmu/ifi/dbs/elki/utilities/exceptions/AbortException.java
+++ b/src/de/lmu/ifi/dbs/elki/utilities/exceptions/AbortException.java
@@ -1,26 +1,28 @@
package de.lmu.ifi.dbs.elki.utilities.exceptions;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
+
/**
* Exception for aborting some process and transporting a message.
diff --git a/src/de/lmu/ifi/dbs/elki/utilities/exceptions/ObjectNotFoundException.java b/src/de/lmu/ifi/dbs/elki/utilities/exceptions/ObjectNotFoundException.java
index ddfabca9..9bc9d056 100644
--- a/src/de/lmu/ifi/dbs/elki/utilities/exceptions/ObjectNotFoundException.java
+++ b/src/de/lmu/ifi/dbs/elki/utilities/exceptions/ObjectNotFoundException.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.utilities.exceptions;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.database.ids.DBID;
diff --git a/src/de/lmu/ifi/dbs/elki/utilities/exceptions/UnableToComplyException.java b/src/de/lmu/ifi/dbs/elki/utilities/exceptions/UnableToComplyException.java
index f647ccfe..539af3dd 100644
--- a/src/de/lmu/ifi/dbs/elki/utilities/exceptions/UnableToComplyException.java
+++ b/src/de/lmu/ifi/dbs/elki/utilities/exceptions/UnableToComplyException.java
@@ -1,26 +1,28 @@
package de.lmu.ifi.dbs.elki.utilities.exceptions;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
/**
* General Exception to state inability to execute an operation.
diff --git a/src/de/lmu/ifi/dbs/elki/utilities/iterator/AbstractFilteredIterator.java b/src/de/lmu/ifi/dbs/elki/utilities/iterator/AbstractFilteredIterator.java
index 12f21ef2..8cb14df3 100644
--- a/src/de/lmu/ifi/dbs/elki/utilities/iterator/AbstractFilteredIterator.java
+++ b/src/de/lmu/ifi/dbs/elki/utilities/iterator/AbstractFilteredIterator.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.utilities.iterator;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.Iterator;
diff --git a/src/de/lmu/ifi/dbs/elki/utilities/iterator/EmptyIterator.java b/src/de/lmu/ifi/dbs/elki/utilities/iterator/EmptyIterator.java
index dd3b5869..10fbca1c 100644
--- a/src/de/lmu/ifi/dbs/elki/utilities/iterator/EmptyIterator.java
+++ b/src/de/lmu/ifi/dbs/elki/utilities/iterator/EmptyIterator.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.utilities.iterator;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.Iterator;
diff --git a/src/de/lmu/ifi/dbs/elki/utilities/iterator/IterableIterator.java b/src/de/lmu/ifi/dbs/elki/utilities/iterator/IterableIterator.java
index cdeb2e74..7a8e0c73 100644
--- a/src/de/lmu/ifi/dbs/elki/utilities/iterator/IterableIterator.java
+++ b/src/de/lmu/ifi/dbs/elki/utilities/iterator/IterableIterator.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.utilities.iterator;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.Iterator;
diff --git a/src/de/lmu/ifi/dbs/elki/utilities/iterator/IterableIteratorAdapter.java b/src/de/lmu/ifi/dbs/elki/utilities/iterator/IterableIteratorAdapter.java
index fa6ab44b..3976319b 100644
--- a/src/de/lmu/ifi/dbs/elki/utilities/iterator/IterableIteratorAdapter.java
+++ b/src/de/lmu/ifi/dbs/elki/utilities/iterator/IterableIteratorAdapter.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.utilities.iterator;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.Iterator;
diff --git a/src/de/lmu/ifi/dbs/elki/utilities/iterator/IterableUtil.java b/src/de/lmu/ifi/dbs/elki/utilities/iterator/IterableUtil.java
index b5e2f657..fa748248 100644
--- a/src/de/lmu/ifi/dbs/elki/utilities/iterator/IterableUtil.java
+++ b/src/de/lmu/ifi/dbs/elki/utilities/iterator/IterableUtil.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.utilities.iterator;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.Iterator;
diff --git a/src/de/lmu/ifi/dbs/elki/utilities/iterator/MergedIterator.java b/src/de/lmu/ifi/dbs/elki/utilities/iterator/MergedIterator.java
index 1ba3c450..2676a4fb 100644
--- a/src/de/lmu/ifi/dbs/elki/utilities/iterator/MergedIterator.java
+++ b/src/de/lmu/ifi/dbs/elki/utilities/iterator/MergedIterator.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.utilities.iterator;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.Arrays;
import java.util.Collection;
diff --git a/src/de/lmu/ifi/dbs/elki/utilities/iterator/OneItemIterator.java b/src/de/lmu/ifi/dbs/elki/utilities/iterator/OneItemIterator.java
index d50498ac..d67503af 100644
--- a/src/de/lmu/ifi/dbs/elki/utilities/iterator/OneItemIterator.java
+++ b/src/de/lmu/ifi/dbs/elki/utilities/iterator/OneItemIterator.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.utilities.iterator;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.Iterator;
diff --git a/src/de/lmu/ifi/dbs/elki/utilities/iterator/ReverseListIterator.java b/src/de/lmu/ifi/dbs/elki/utilities/iterator/ReverseListIterator.java
index 3f1ebadc..52cab893 100644
--- a/src/de/lmu/ifi/dbs/elki/utilities/iterator/ReverseListIterator.java
+++ b/src/de/lmu/ifi/dbs/elki/utilities/iterator/ReverseListIterator.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.utilities.iterator;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.Iterator;
import java.util.List;
diff --git a/src/de/lmu/ifi/dbs/elki/utilities/iterator/TypeFilterIterator.java b/src/de/lmu/ifi/dbs/elki/utilities/iterator/TypeFilterIterator.java
index 0d27c773..9bf2ecfc 100644
--- a/src/de/lmu/ifi/dbs/elki/utilities/iterator/TypeFilterIterator.java
+++ b/src/de/lmu/ifi/dbs/elki/utilities/iterator/TypeFilterIterator.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.utilities.iterator;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.Iterator;
diff --git a/src/de/lmu/ifi/dbs/elki/utilities/iterator/UnmodifiableIterator.java b/src/de/lmu/ifi/dbs/elki/utilities/iterator/UnmodifiableIterator.java
index 56038fcb..271ba495 100644
--- a/src/de/lmu/ifi/dbs/elki/utilities/iterator/UnmodifiableIterator.java
+++ b/src/de/lmu/ifi/dbs/elki/utilities/iterator/UnmodifiableIterator.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.utilities.iterator;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.Iterator;
diff --git a/src/de/lmu/ifi/dbs/elki/utilities/iterator/UnmodifiableListIterator.java b/src/de/lmu/ifi/dbs/elki/utilities/iterator/UnmodifiableListIterator.java
index 224f95a1..46affd34 100644
--- a/src/de/lmu/ifi/dbs/elki/utilities/iterator/UnmodifiableListIterator.java
+++ b/src/de/lmu/ifi/dbs/elki/utilities/iterator/UnmodifiableListIterator.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.utilities.iterator;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.ListIterator;
diff --git a/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/AbstractParameterizer.java b/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/AbstractParameterizer.java
index e3280d00..9f1a3d49 100644
--- a/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/AbstractParameterizer.java
+++ b/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/AbstractParameterizer.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.utilities.optionhandling;
-/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.utilities.exceptions.AbortException;
import de.lmu.ifi.dbs.elki.utilities.optionhandling.parameterization.Parameterization;
@@ -86,13 +87,20 @@ public abstract class AbstractParameterizer implements Parameterizer {
abstract protected Object makeInstance();
/**
- * The main parameterization wrapper.
+ * Method to configure a class, then instantiate when the configuration step
+ * was successful.
+ *
+ * <b>Don't call this directly use unless you know what you are doing. <br />
+ * Instead, use {@link Parameterization#tryInstantiate(Class)}!</b>
*
- * Usually, you should use {@link Parameterization#tryInstantiate(Class)}
- * instead!
+ * Otherwise, {@code null} will be returned, and the resulting errors can be
+ * retrieved from the {@link Parameterization} parameter object. In general,
+ * you should be checking the {@link Parameterization} object for errors
+ * before accessing the returned value, since it may be {@code null}
+ * unexpectedly otherwise.
*
* @param config Parameterization
- * @return Instance
+ * @return Instance or {@code null}
*/
public final Object make(Parameterization config) {
if(state != STATE_FRESH) {
diff --git a/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/InternalParameterizationErrors.java b/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/InternalParameterizationErrors.java
index 6f2c2b92..987497ff 100644
--- a/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/InternalParameterizationErrors.java
+++ b/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/InternalParameterizationErrors.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.utilities.optionhandling;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.Collection;
diff --git a/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/NoParameterValueException.java b/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/NoParameterValueException.java
index 81eca0fb..00fbac6b 100644
--- a/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/NoParameterValueException.java
+++ b/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/NoParameterValueException.java
@@ -1,26 +1,28 @@
package de.lmu.ifi.dbs.elki.utilities.optionhandling;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
+
/**
* Thrown by OptionHandler in case of incorrect parameter-array.
diff --git a/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/OptionID.java b/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/OptionID.java
index d1f292fc..8202f9d3 100644
--- a/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/OptionID.java
+++ b/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/OptionID.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.utilities.optionhandling;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.utilities.ConstantObject;
diff --git a/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/OptionUtil.java b/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/OptionUtil.java
index fbab7634..f4ad3e48 100644
--- a/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/OptionUtil.java
+++ b/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/OptionUtil.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.utilities.optionhandling;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.Collection;
import java.util.List;
diff --git a/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/ParameterException.java b/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/ParameterException.java
index 2ebcf17e..fabe9c7d 100644
--- a/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/ParameterException.java
+++ b/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/ParameterException.java
@@ -1,26 +1,28 @@
package de.lmu.ifi.dbs.elki.utilities.optionhandling;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
+
/**
* Abstract super class for all exceptions thrown during parameterization.
diff --git a/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/Parameterizable.java b/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/Parameterizable.java
index e593f541..044c119c 100644
--- a/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/Parameterizable.java
+++ b/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/Parameterizable.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.utilities.optionhandling;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.utilities.InspectionUtilFrequentlyScanned;
diff --git a/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/Parameterizer.java b/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/Parameterizer.java
index d62391ca..b434ea4e 100644
--- a/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/Parameterizer.java
+++ b/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/Parameterizer.java
@@ -1,32 +1,35 @@
package de.lmu.ifi.dbs.elki.utilities.optionhandling;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.utilities.optionhandling.parameterization.Parameterization;
/**
* Generic interface for a parameterizable factory.
*
+ * To instantiate a class, use {@link Parameterization#tryInstantiate(Class)}!
+ *
* @author Erich Schubert
*/
public interface Parameterizer {
@@ -39,4 +42,4 @@ public interface Parameterizer {
* @param config Parameterization
*/
public void configure(Parameterization config);
-}
+} \ No newline at end of file
diff --git a/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/UnspecifiedParameterException.java b/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/UnspecifiedParameterException.java
index f8f04147..16828b3f 100644
--- a/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/UnspecifiedParameterException.java
+++ b/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/UnspecifiedParameterException.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.utilities.optionhandling;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters.Parameter;
diff --git a/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/UnusedParameterException.java b/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/UnusedParameterException.java
index 7d7a9441..05943069 100644
--- a/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/UnusedParameterException.java
+++ b/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/UnusedParameterException.java
@@ -1,26 +1,28 @@
package de.lmu.ifi.dbs.elki.utilities.optionhandling;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
+
/**
* Thrown by OptionHandler in case of request of an unused parameter.
diff --git a/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/WrongParameterValueException.java b/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/WrongParameterValueException.java
index e41e4631..0f9c6260 100644
--- a/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/WrongParameterValueException.java
+++ b/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/WrongParameterValueException.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.utilities.optionhandling;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters.Parameter;
diff --git a/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/constraints/AbstractNumberConstraint.java b/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/constraints/AbstractNumberConstraint.java
index 25221f07..a631a316 100644
--- a/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/constraints/AbstractNumberConstraint.java
+++ b/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/constraints/AbstractNumberConstraint.java
@@ -1,26 +1,28 @@
package de.lmu.ifi.dbs.elki.utilities.optionhandling.constraints;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
+
/**
* Abstract super class for constraints dealing with a certain number value.
diff --git a/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/constraints/AllOrNoneMustBeSetGlobalConstraint.java b/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/constraints/AllOrNoneMustBeSetGlobalConstraint.java
index d0fa79e8..59a91613 100644
--- a/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/constraints/AllOrNoneMustBeSetGlobalConstraint.java
+++ b/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/constraints/AllOrNoneMustBeSetGlobalConstraint.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.utilities.optionhandling.constraints;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.List;
import java.util.Vector;
diff --git a/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/constraints/EqualSizeGlobalConstraint.java b/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/constraints/EqualSizeGlobalConstraint.java
index d7e67e85..0e04906b 100644
--- a/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/constraints/EqualSizeGlobalConstraint.java
+++ b/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/constraints/EqualSizeGlobalConstraint.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.utilities.optionhandling.constraints;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.List;
diff --git a/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/constraints/EqualStringConstraint.java b/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/constraints/EqualStringConstraint.java
index de7dec4b..ea952a30 100644
--- a/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/constraints/EqualStringConstraint.java
+++ b/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/constraints/EqualStringConstraint.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.utilities.optionhandling.constraints;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.Arrays;
diff --git a/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/constraints/GlobalListSizeConstraint.java b/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/constraints/GlobalListSizeConstraint.java
index cdd366fb..8f510dc9 100644
--- a/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/constraints/GlobalListSizeConstraint.java
+++ b/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/constraints/GlobalListSizeConstraint.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.utilities.optionhandling.constraints;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.utilities.optionhandling.ParameterException;
import de.lmu.ifi.dbs.elki.utilities.optionhandling.WrongParameterValueException;
diff --git a/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/constraints/GlobalParameterConstraint.java b/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/constraints/GlobalParameterConstraint.java
index aeab86ca..404da18f 100644
--- a/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/constraints/GlobalParameterConstraint.java
+++ b/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/constraints/GlobalParameterConstraint.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.utilities.optionhandling.constraints;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.utilities.optionhandling.ParameterException;
diff --git a/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/constraints/GlobalVectorListElementSizeConstraint.java b/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/constraints/GlobalVectorListElementSizeConstraint.java
index 8f0f99fc..fe4b6520 100644
--- a/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/constraints/GlobalVectorListElementSizeConstraint.java
+++ b/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/constraints/GlobalVectorListElementSizeConstraint.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.utilities.optionhandling.constraints;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.List;
diff --git a/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/constraints/GreaterConstraint.java b/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/constraints/GreaterConstraint.java
index 3f613f46..1f894094 100644
--- a/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/constraints/GreaterConstraint.java
+++ b/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/constraints/GreaterConstraint.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.utilities.optionhandling.constraints;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.utilities.optionhandling.ParameterException;
import de.lmu.ifi.dbs.elki.utilities.optionhandling.WrongParameterValueException;
diff --git a/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/constraints/GreaterEqualConstraint.java b/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/constraints/GreaterEqualConstraint.java
index 360b5d5f..7a1d2f7a 100644
--- a/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/constraints/GreaterEqualConstraint.java
+++ b/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/constraints/GreaterEqualConstraint.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.utilities.optionhandling.constraints;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.utilities.optionhandling.ParameterException;
import de.lmu.ifi.dbs.elki.utilities.optionhandling.WrongParameterValueException;
diff --git a/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/constraints/IntervalConstraint.java b/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/constraints/IntervalConstraint.java
index f742781c..a2d5b8b3 100644
--- a/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/constraints/IntervalConstraint.java
+++ b/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/constraints/IntervalConstraint.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.utilities.optionhandling.constraints;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.utilities.optionhandling.ParameterException;
import de.lmu.ifi.dbs.elki.utilities.optionhandling.WrongParameterValueException;
diff --git a/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/constraints/LessConstraint.java b/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/constraints/LessConstraint.java
index 331a72dc..a7c7cebd 100644
--- a/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/constraints/LessConstraint.java
+++ b/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/constraints/LessConstraint.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.utilities.optionhandling.constraints;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.utilities.optionhandling.ParameterException;
import de.lmu.ifi.dbs.elki.utilities.optionhandling.WrongParameterValueException;
diff --git a/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/constraints/LessEqualConstraint.java b/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/constraints/LessEqualConstraint.java
index 0feccbcb..9c180c02 100644
--- a/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/constraints/LessEqualConstraint.java
+++ b/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/constraints/LessEqualConstraint.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.utilities.optionhandling.constraints;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.utilities.optionhandling.ParameterException;
import de.lmu.ifi.dbs.elki.utilities.optionhandling.WrongParameterValueException;
diff --git a/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/constraints/LessEqualGlobalConstraint.java b/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/constraints/LessEqualGlobalConstraint.java
index 4c20bf5e..358248cf 100644
--- a/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/constraints/LessEqualGlobalConstraint.java
+++ b/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/constraints/LessEqualGlobalConstraint.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.utilities.optionhandling.constraints;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.utilities.optionhandling.ParameterException;
import de.lmu.ifi.dbs.elki.utilities.optionhandling.WrongParameterValueException;
diff --git a/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/constraints/LessGlobalConstraint.java b/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/constraints/LessGlobalConstraint.java
index 0736c86f..6ea46b09 100644
--- a/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/constraints/LessGlobalConstraint.java
+++ b/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/constraints/LessGlobalConstraint.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.utilities.optionhandling.constraints;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.utilities.optionhandling.ParameterException;
import de.lmu.ifi.dbs.elki.utilities.optionhandling.WrongParameterValueException;
diff --git a/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/constraints/ListGreaterEqualConstraint.java b/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/constraints/ListGreaterEqualConstraint.java
index ef5b9f0c..fa56d021 100644
--- a/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/constraints/ListGreaterEqualConstraint.java
+++ b/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/constraints/ListGreaterEqualConstraint.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.utilities.optionhandling.constraints;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.utilities.optionhandling.ParameterException;
import de.lmu.ifi.dbs.elki.utilities.optionhandling.WrongParameterValueException;
diff --git a/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/constraints/ListSizeConstraint.java b/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/constraints/ListSizeConstraint.java
index f83c5ac2..f2fef29d 100644
--- a/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/constraints/ListSizeConstraint.java
+++ b/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/constraints/ListSizeConstraint.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.utilities.optionhandling.constraints;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.List;
diff --git a/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/constraints/NoDuplicateValueGlobalConstraint.java b/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/constraints/NoDuplicateValueGlobalConstraint.java
index cb5426d0..7ddd3d3b 100644
--- a/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/constraints/NoDuplicateValueGlobalConstraint.java
+++ b/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/constraints/NoDuplicateValueGlobalConstraint.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.utilities.optionhandling.constraints;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.Arrays;
import java.util.HashSet;
diff --git a/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/constraints/OneMustBeSetGlobalConstraint.java b/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/constraints/OneMustBeSetGlobalConstraint.java
index f7a0741f..7473b6bd 100644
--- a/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/constraints/OneMustBeSetGlobalConstraint.java
+++ b/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/constraints/OneMustBeSetGlobalConstraint.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.utilities.optionhandling.constraints;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.List;
diff --git a/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/constraints/OnlyOneIsAllowedToBeSetGlobalConstraint.java b/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/constraints/OnlyOneIsAllowedToBeSetGlobalConstraint.java
index 8b755d9c..8f677669 100644
--- a/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/constraints/OnlyOneIsAllowedToBeSetGlobalConstraint.java
+++ b/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/constraints/OnlyOneIsAllowedToBeSetGlobalConstraint.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.utilities.optionhandling.constraints;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.List;
import java.util.Vector;
diff --git a/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/constraints/ParameterConstraint.java b/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/constraints/ParameterConstraint.java
index 77b959ee..ea57c0ea 100644
--- a/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/constraints/ParameterConstraint.java
+++ b/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/constraints/ParameterConstraint.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.utilities.optionhandling.constraints;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.utilities.optionhandling.ParameterException;
diff --git a/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/constraints/ParameterFlagGlobalConstraint.java b/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/constraints/ParameterFlagGlobalConstraint.java
index 4c993d7d..bb2239b3 100644
--- a/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/constraints/ParameterFlagGlobalConstraint.java
+++ b/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/constraints/ParameterFlagGlobalConstraint.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.utilities.optionhandling.constraints;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.List;
diff --git a/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/constraints/StringLengthConstraint.java b/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/constraints/StringLengthConstraint.java
index fa570c56..4fc2592c 100644
--- a/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/constraints/StringLengthConstraint.java
+++ b/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/constraints/StringLengthConstraint.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.utilities.optionhandling.constraints;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.utilities.optionhandling.ParameterException;
import de.lmu.ifi.dbs.elki.utilities.optionhandling.WrongParameterValueException;
diff --git a/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/parameterization/AbstractParameterization.java b/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/parameterization/AbstractParameterization.java
index 81af0f93..a333bffd 100644
--- a/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/parameterization/AbstractParameterization.java
+++ b/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/parameterization/AbstractParameterization.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.utilities.optionhandling.parameterization;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.Collection;
diff --git a/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/parameterization/ChainedParameterization.java b/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/parameterization/ChainedParameterization.java
index d25e251a..33aab341 100644
--- a/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/parameterization/ChainedParameterization.java
+++ b/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/parameterization/ChainedParameterization.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.utilities.optionhandling.parameterization;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.Vector;
diff --git a/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/parameterization/EmptyParameterization.java b/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/parameterization/EmptyParameterization.java
index a94d2eb1..6def810a 100644
--- a/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/parameterization/EmptyParameterization.java
+++ b/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/parameterization/EmptyParameterization.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.utilities.optionhandling.parameterization;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.utilities.optionhandling.ParameterException;
import de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters.Parameter;
diff --git a/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/parameterization/ListParameterization.java b/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/parameterization/ListParameterization.java
index 21d686d1..8366a089 100644
--- a/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/parameterization/ListParameterization.java
+++ b/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/parameterization/ListParameterization.java
@@ -1,27 +1,29 @@
package de.lmu.ifi.dbs.elki.utilities.optionhandling.parameterization;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
+import java.util.ArrayList;
import java.util.Collection;
import java.util.Iterator;
import java.util.LinkedList;
@@ -149,4 +151,18 @@ public class ListParameterization extends AbstractParameterization {
}
return buf.toString();
}
+
+ /**
+ * Serialize parameters.
+ *
+ * @return Array list of parameters
+ */
+ public ArrayList<String> serialize() {
+ ArrayList<String> params = new ArrayList<String>();
+ for (Pair<OptionID, Object> pair : parameters) {
+ params.add("-" + pair.getFirst().toString());
+ params.add(pair.getSecond().toString());
+ }
+ return params;
+ }
} \ No newline at end of file
diff --git a/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/parameterization/MergedParameterization.java b/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/parameterization/MergedParameterization.java
index ab2babe4..7a9ce476 100644
--- a/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/parameterization/MergedParameterization.java
+++ b/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/parameterization/MergedParameterization.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.utilities.optionhandling.parameterization;
-/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.Collection;
import java.util.Vector;
@@ -111,6 +112,7 @@ public class MergedParameterization implements Parameterization {
used.add(new Pair<OptionID, Object>(opt.getOptionID(), opt.getValue()));
return true;
}
+ used.add(new Pair<OptionID, Object>(opt.getOptionID(), opt.getDefaultValue()));
return false;
}
diff --git a/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/parameterization/Parameterization.java b/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/parameterization/Parameterization.java
index f0edc895..be7c422e 100644
--- a/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/parameterization/Parameterization.java
+++ b/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/parameterization/Parameterization.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.utilities.optionhandling.parameterization;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.Collection;
diff --git a/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/parameterization/SerializedParameterization.java b/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/parameterization/SerializedParameterization.java
index 61458e1f..6d19cfd5 100644
--- a/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/parameterization/SerializedParameterization.java
+++ b/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/parameterization/SerializedParameterization.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.utilities.optionhandling.parameterization;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.Iterator;
import java.util.LinkedList;
diff --git a/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/parameterization/TrackParameters.java b/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/parameterization/TrackParameters.java
index 1a15d08f..0399a5c7 100644
--- a/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/parameterization/TrackParameters.java
+++ b/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/parameterization/TrackParameters.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.utilities.optionhandling.parameterization;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.Collection;
import java.util.HashMap;
diff --git a/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/parameterization/UnParameterization.java b/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/parameterization/UnParameterization.java
index 3d851c08..4704e1da 100644
--- a/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/parameterization/UnParameterization.java
+++ b/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/parameterization/UnParameterization.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.utilities.optionhandling.parameterization;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.Collection;
diff --git a/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/parameters/ClassListParameter.java b/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/parameters/ClassListParameter.java
index 65303aba..2ec3fb91 100644
--- a/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/parameters/ClassListParameter.java
+++ b/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/parameters/ClassListParameter.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.ArrayList;
import java.util.List;
diff --git a/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/parameters/ClassParameter.java b/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/parameters/ClassParameter.java
index 4fb0702a..36abc0f7 100644
--- a/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/parameters/ClassParameter.java
+++ b/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/parameters/ClassParameter.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.lang.reflect.InvocationTargetException;
diff --git a/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/parameters/DistanceParameter.java b/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/parameters/DistanceParameter.java
index d8713f74..a47f6d53 100644
--- a/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/parameters/DistanceParameter.java
+++ b/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/parameters/DistanceParameter.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.List;
diff --git a/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/parameters/DoubleListParameter.java b/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/parameters/DoubleListParameter.java
index 8ea1948d..2e255f2f 100644
--- a/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/parameters/DoubleListParameter.java
+++ b/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/parameters/DoubleListParameter.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.ArrayList;
import java.util.List;
diff --git a/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/parameters/DoubleParameter.java b/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/parameters/DoubleParameter.java
index 479e929b..aad0a2ee 100644
--- a/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/parameters/DoubleParameter.java
+++ b/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/parameters/DoubleParameter.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.List;
diff --git a/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/parameters/FileListParameter.java b/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/parameters/FileListParameter.java
index 2a452393..ec716a63 100644
--- a/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/parameters/FileListParameter.java
+++ b/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/parameters/FileListParameter.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.io.File;
import java.util.ArrayList;
diff --git a/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/parameters/FileParameter.java b/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/parameters/FileParameter.java
index 5da02dc8..7c642fe8 100644
--- a/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/parameters/FileParameter.java
+++ b/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/parameters/FileParameter.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.io.File;
import java.io.IOException;
diff --git a/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/parameters/Flag.java b/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/parameters/Flag.java
index 5484ab8b..fd383020 100644
--- a/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/parameters/Flag.java
+++ b/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/parameters/Flag.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.utilities.exceptions.AbortException;
import de.lmu.ifi.dbs.elki.utilities.optionhandling.OptionID;
diff --git a/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/parameters/IntListParameter.java b/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/parameters/IntListParameter.java
index 42d8cb25..32675d22 100644
--- a/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/parameters/IntListParameter.java
+++ b/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/parameters/IntListParameter.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.ArrayList;
import java.util.Iterator;
diff --git a/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/parameters/IntParameter.java b/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/parameters/IntParameter.java
index ab6e18e3..a1b22519 100644
--- a/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/parameters/IntParameter.java
+++ b/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/parameters/IntParameter.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.List;
diff --git a/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/parameters/ListParameter.java b/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/parameters/ListParameter.java
index 2654d19c..0cc35d62 100644
--- a/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/parameters/ListParameter.java
+++ b/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/parameters/ListParameter.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.utilities.optionhandling.OptionID;
import de.lmu.ifi.dbs.elki.utilities.optionhandling.constraints.ParameterConstraint;
diff --git a/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/parameters/LongParameter.java b/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/parameters/LongParameter.java
index b1de4db4..d03d77f1 100644
--- a/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/parameters/LongParameter.java
+++ b/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/parameters/LongParameter.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.List;
diff --git a/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/parameters/NumberParameter.java b/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/parameters/NumberParameter.java
index 547562f8..87384e4f 100644
--- a/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/parameters/NumberParameter.java
+++ b/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/parameters/NumberParameter.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.utilities.optionhandling.OptionID;
import de.lmu.ifi.dbs.elki.utilities.optionhandling.constraints.ParameterConstraint;
diff --git a/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/parameters/ObjectListParameter.java b/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/parameters/ObjectListParameter.java
index 6446713f..f5eb2838 100644
--- a/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/parameters/ObjectListParameter.java
+++ b/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/parameters/ObjectListParameter.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.ArrayList;
import java.util.List;
diff --git a/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/parameters/ObjectParameter.java b/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/parameters/ObjectParameter.java
index eb44f69b..ffc668c2 100644
--- a/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/parameters/ObjectParameter.java
+++ b/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/parameters/ObjectParameter.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.utilities.optionhandling.OptionID;
import de.lmu.ifi.dbs.elki.utilities.optionhandling.ParameterException;
diff --git a/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/parameters/Parameter.java b/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/parameters/Parameter.java
index 40542680..9c555359 100644
--- a/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/parameters/Parameter.java
+++ b/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/parameters/Parameter.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.security.InvalidParameterException;
import java.util.List;
diff --git a/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/parameters/PatternParameter.java b/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/parameters/PatternParameter.java
index da084c3b..b988f9cb 100644
--- a/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/parameters/PatternParameter.java
+++ b/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/parameters/PatternParameter.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.List;
import java.util.regex.Pattern;
diff --git a/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/parameters/StringParameter.java b/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/parameters/StringParameter.java
index c1cc0024..43a19217 100644
--- a/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/parameters/StringParameter.java
+++ b/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/parameters/StringParameter.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.List;
diff --git a/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/parameters/VectorListParameter.java b/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/parameters/VectorListParameter.java
index be16e923..9fb9c6f1 100644
--- a/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/parameters/VectorListParameter.java
+++ b/src/de/lmu/ifi/dbs/elki/utilities/optionhandling/parameters/VectorListParameter.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.ArrayList;
import java.util.Iterator;
diff --git a/src/de/lmu/ifi/dbs/elki/utilities/pairs/CPair.java b/src/de/lmu/ifi/dbs/elki/utilities/pairs/CPair.java
index 8530d0d6..ce7b5ded 100644
--- a/src/de/lmu/ifi/dbs/elki/utilities/pairs/CPair.java
+++ b/src/de/lmu/ifi/dbs/elki/utilities/pairs/CPair.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.utilities.pairs;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.utilities.ClassGenericsUtil;
diff --git a/src/de/lmu/ifi/dbs/elki/utilities/pairs/CTriple.java b/src/de/lmu/ifi/dbs/elki/utilities/pairs/CTriple.java
index ba3600e6..28802e3e 100644
--- a/src/de/lmu/ifi/dbs/elki/utilities/pairs/CTriple.java
+++ b/src/de/lmu/ifi/dbs/elki/utilities/pairs/CTriple.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.utilities.pairs;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.utilities.ClassGenericsUtil;
diff --git a/src/de/lmu/ifi/dbs/elki/utilities/pairs/DoubleDoublePair.java b/src/de/lmu/ifi/dbs/elki/utilities/pairs/DoubleDoublePair.java
index 040b5a30..410f3f36 100644
--- a/src/de/lmu/ifi/dbs/elki/utilities/pairs/DoubleDoublePair.java
+++ b/src/de/lmu/ifi/dbs/elki/utilities/pairs/DoubleDoublePair.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.utilities.pairs;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.Comparator;
diff --git a/src/de/lmu/ifi/dbs/elki/utilities/pairs/DoubleIntPair.java b/src/de/lmu/ifi/dbs/elki/utilities/pairs/DoubleIntPair.java
index 1d8305f0..98aba136 100644
--- a/src/de/lmu/ifi/dbs/elki/utilities/pairs/DoubleIntPair.java
+++ b/src/de/lmu/ifi/dbs/elki/utilities/pairs/DoubleIntPair.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.utilities.pairs;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.Comparator;
diff --git a/src/de/lmu/ifi/dbs/elki/utilities/pairs/DoubleObjPair.java b/src/de/lmu/ifi/dbs/elki/utilities/pairs/DoubleObjPair.java
index ea23bb90..970926bc 100644
--- a/src/de/lmu/ifi/dbs/elki/utilities/pairs/DoubleObjPair.java
+++ b/src/de/lmu/ifi/dbs/elki/utilities/pairs/DoubleObjPair.java
@@ -1,26 +1,28 @@
package de.lmu.ifi.dbs.elki.utilities.pairs;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
/**
* Pair storing a native double value and an arbitrary object.
diff --git a/src/de/lmu/ifi/dbs/elki/utilities/pairs/FCPair.java b/src/de/lmu/ifi/dbs/elki/utilities/pairs/FCPair.java
index 4c411a08..00636784 100644
--- a/src/de/lmu/ifi/dbs/elki/utilities/pairs/FCPair.java
+++ b/src/de/lmu/ifi/dbs/elki/utilities/pairs/FCPair.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.utilities.pairs;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.utilities.ClassGenericsUtil;
diff --git a/src/de/lmu/ifi/dbs/elki/utilities/pairs/IntDoublePair.java b/src/de/lmu/ifi/dbs/elki/utilities/pairs/IntDoublePair.java
index 4f67e6d7..2806731c 100644
--- a/src/de/lmu/ifi/dbs/elki/utilities/pairs/IntDoublePair.java
+++ b/src/de/lmu/ifi/dbs/elki/utilities/pairs/IntDoublePair.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.utilities.pairs;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.Comparator;
diff --git a/src/de/lmu/ifi/dbs/elki/utilities/pairs/IntIntPair.java b/src/de/lmu/ifi/dbs/elki/utilities/pairs/IntIntPair.java
index db856c52..62b57709 100644
--- a/src/de/lmu/ifi/dbs/elki/utilities/pairs/IntIntPair.java
+++ b/src/de/lmu/ifi/dbs/elki/utilities/pairs/IntIntPair.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.utilities.pairs;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.Comparator;
diff --git a/src/de/lmu/ifi/dbs/elki/utilities/pairs/Pair.java b/src/de/lmu/ifi/dbs/elki/utilities/pairs/Pair.java
index 2767798a..f034bd97 100644
--- a/src/de/lmu/ifi/dbs/elki/utilities/pairs/Pair.java
+++ b/src/de/lmu/ifi/dbs/elki/utilities/pairs/Pair.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.utilities.pairs;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.utilities.ClassGenericsUtil;
diff --git a/src/de/lmu/ifi/dbs/elki/utilities/pairs/PairInterface.java b/src/de/lmu/ifi/dbs/elki/utilities/pairs/PairInterface.java
index 1bc674dc..8e45ce2d 100644
--- a/src/de/lmu/ifi/dbs/elki/utilities/pairs/PairInterface.java
+++ b/src/de/lmu/ifi/dbs/elki/utilities/pairs/PairInterface.java
@@ -1,26 +1,28 @@
package de.lmu.ifi.dbs.elki.utilities.pairs;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
/**
* Pair interface.
diff --git a/src/de/lmu/ifi/dbs/elki/utilities/pairs/PairUtil.java b/src/de/lmu/ifi/dbs/elki/utilities/pairs/PairUtil.java
index e27518c8..69e8ef3c 100644
--- a/src/de/lmu/ifi/dbs/elki/utilities/pairs/PairUtil.java
+++ b/src/de/lmu/ifi/dbs/elki/utilities/pairs/PairUtil.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.utilities.pairs;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.Comparator;
diff --git a/src/de/lmu/ifi/dbs/elki/utilities/pairs/SCPair.java b/src/de/lmu/ifi/dbs/elki/utilities/pairs/SCPair.java
index bec525cf..a2880a8f 100644
--- a/src/de/lmu/ifi/dbs/elki/utilities/pairs/SCPair.java
+++ b/src/de/lmu/ifi/dbs/elki/utilities/pairs/SCPair.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.utilities.pairs;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.utilities.ClassGenericsUtil;
diff --git a/src/de/lmu/ifi/dbs/elki/utilities/pairs/Triple.java b/src/de/lmu/ifi/dbs/elki/utilities/pairs/Triple.java
index fecf72cd..34c8713a 100644
--- a/src/de/lmu/ifi/dbs/elki/utilities/pairs/Triple.java
+++ b/src/de/lmu/ifi/dbs/elki/utilities/pairs/Triple.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.utilities.pairs;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.utilities.ClassGenericsUtil;
diff --git a/src/de/lmu/ifi/dbs/elki/utilities/referencepoints/AxisBasedReferencePoints.java b/src/de/lmu/ifi/dbs/elki/utilities/referencepoints/AxisBasedReferencePoints.java
index fe115367..5fd4d6b4 100644
--- a/src/de/lmu/ifi/dbs/elki/utilities/referencepoints/AxisBasedReferencePoints.java
+++ b/src/de/lmu/ifi/dbs/elki/utilities/referencepoints/AxisBasedReferencePoints.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.utilities.referencepoints;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.ArrayList;
import java.util.Collection;
diff --git a/src/de/lmu/ifi/dbs/elki/utilities/referencepoints/FullDatabaseReferencePoints.java b/src/de/lmu/ifi/dbs/elki/utilities/referencepoints/FullDatabaseReferencePoints.java
index 60186972..62cb4c03 100644
--- a/src/de/lmu/ifi/dbs/elki/utilities/referencepoints/FullDatabaseReferencePoints.java
+++ b/src/de/lmu/ifi/dbs/elki/utilities/referencepoints/FullDatabaseReferencePoints.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.utilities.referencepoints;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.Collection;
diff --git a/src/de/lmu/ifi/dbs/elki/utilities/referencepoints/GridBasedReferencePoints.java b/src/de/lmu/ifi/dbs/elki/utilities/referencepoints/GridBasedReferencePoints.java
index 2d6edf92..142f9708 100644
--- a/src/de/lmu/ifi/dbs/elki/utilities/referencepoints/GridBasedReferencePoints.java
+++ b/src/de/lmu/ifi/dbs/elki/utilities/referencepoints/GridBasedReferencePoints.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.utilities.referencepoints;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.ArrayList;
import java.util.Collection;
diff --git a/src/de/lmu/ifi/dbs/elki/utilities/referencepoints/RandomGeneratedReferencePoints.java b/src/de/lmu/ifi/dbs/elki/utilities/referencepoints/RandomGeneratedReferencePoints.java
index a836116a..ed7d74f6 100644
--- a/src/de/lmu/ifi/dbs/elki/utilities/referencepoints/RandomGeneratedReferencePoints.java
+++ b/src/de/lmu/ifi/dbs/elki/utilities/referencepoints/RandomGeneratedReferencePoints.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.utilities.referencepoints;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.ArrayList;
import java.util.Collection;
diff --git a/src/de/lmu/ifi/dbs/elki/utilities/referencepoints/RandomSampleReferencePoints.java b/src/de/lmu/ifi/dbs/elki/utilities/referencepoints/RandomSampleReferencePoints.java
index e5aff63b..43c5f233 100644
--- a/src/de/lmu/ifi/dbs/elki/utilities/referencepoints/RandomSampleReferencePoints.java
+++ b/src/de/lmu/ifi/dbs/elki/utilities/referencepoints/RandomSampleReferencePoints.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.utilities.referencepoints;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.ArrayList;
import java.util.Collection;
diff --git a/src/de/lmu/ifi/dbs/elki/utilities/referencepoints/ReferencePointsHeuristic.java b/src/de/lmu/ifi/dbs/elki/utilities/referencepoints/ReferencePointsHeuristic.java
index 762414cc..a7b64cc6 100644
--- a/src/de/lmu/ifi/dbs/elki/utilities/referencepoints/ReferencePointsHeuristic.java
+++ b/src/de/lmu/ifi/dbs/elki/utilities/referencepoints/ReferencePointsHeuristic.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.utilities.referencepoints;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.Collection;
diff --git a/src/de/lmu/ifi/dbs/elki/utilities/referencepoints/StarBasedReferencePoints.java b/src/de/lmu/ifi/dbs/elki/utilities/referencepoints/StarBasedReferencePoints.java
index 7cf58f13..9970bf9c 100644
--- a/src/de/lmu/ifi/dbs/elki/utilities/referencepoints/StarBasedReferencePoints.java
+++ b/src/de/lmu/ifi/dbs/elki/utilities/referencepoints/StarBasedReferencePoints.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.utilities.referencepoints;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.ArrayList;
import java.util.Collection;
diff --git a/src/de/lmu/ifi/dbs/elki/utilities/scaling/ClipScaling.java b/src/de/lmu/ifi/dbs/elki/utilities/scaling/ClipScaling.java
index 504c6c71..d2f53ac2 100644
--- a/src/de/lmu/ifi/dbs/elki/utilities/scaling/ClipScaling.java
+++ b/src/de/lmu/ifi/dbs/elki/utilities/scaling/ClipScaling.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.utilities.scaling;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.utilities.optionhandling.AbstractParameterizer;
import de.lmu.ifi.dbs.elki.utilities.optionhandling.OptionID;
diff --git a/src/de/lmu/ifi/dbs/elki/utilities/scaling/GammaScaling.java b/src/de/lmu/ifi/dbs/elki/utilities/scaling/GammaScaling.java
index 7d0589ca..3aa539af 100644
--- a/src/de/lmu/ifi/dbs/elki/utilities/scaling/GammaScaling.java
+++ b/src/de/lmu/ifi/dbs/elki/utilities/scaling/GammaScaling.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.utilities.scaling;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.utilities.optionhandling.AbstractParameterizer;
import de.lmu.ifi.dbs.elki.utilities.optionhandling.OptionID;
diff --git a/src/de/lmu/ifi/dbs/elki/utilities/scaling/IdentityScaling.java b/src/de/lmu/ifi/dbs/elki/utilities/scaling/IdentityScaling.java
index 2c2bbb02..239d51fe 100644
--- a/src/de/lmu/ifi/dbs/elki/utilities/scaling/IdentityScaling.java
+++ b/src/de/lmu/ifi/dbs/elki/utilities/scaling/IdentityScaling.java
@@ -1,26 +1,28 @@
package de.lmu.ifi.dbs.elki.utilities.scaling;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
/**
* The trivial "identity" scaling function.
diff --git a/src/de/lmu/ifi/dbs/elki/utilities/scaling/LinearScaling.java b/src/de/lmu/ifi/dbs/elki/utilities/scaling/LinearScaling.java
index 09cb72f4..c4ea9e1d 100644
--- a/src/de/lmu/ifi/dbs/elki/utilities/scaling/LinearScaling.java
+++ b/src/de/lmu/ifi/dbs/elki/utilities/scaling/LinearScaling.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.utilities.scaling;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.math.DoubleMinMax;
diff --git a/src/de/lmu/ifi/dbs/elki/utilities/scaling/MinusLogScaling.java b/src/de/lmu/ifi/dbs/elki/utilities/scaling/MinusLogScaling.java
index 98451d6e..a3c31169 100644
--- a/src/de/lmu/ifi/dbs/elki/utilities/scaling/MinusLogScaling.java
+++ b/src/de/lmu/ifi/dbs/elki/utilities/scaling/MinusLogScaling.java
@@ -1,26 +1,28 @@
package de.lmu.ifi.dbs.elki.utilities.scaling;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
+
/**
* Scaling function to invert values by computing -1 * Math.log(x)
diff --git a/src/de/lmu/ifi/dbs/elki/utilities/scaling/ScalingFunction.java b/src/de/lmu/ifi/dbs/elki/utilities/scaling/ScalingFunction.java
index 77150a0e..3aab82ec 100644
--- a/src/de/lmu/ifi/dbs/elki/utilities/scaling/ScalingFunction.java
+++ b/src/de/lmu/ifi/dbs/elki/utilities/scaling/ScalingFunction.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.utilities.scaling;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.utilities.optionhandling.Parameterizable;
diff --git a/src/de/lmu/ifi/dbs/elki/utilities/scaling/StaticScalingFunction.java b/src/de/lmu/ifi/dbs/elki/utilities/scaling/StaticScalingFunction.java
index 942294fe..197f4e6c 100644
--- a/src/de/lmu/ifi/dbs/elki/utilities/scaling/StaticScalingFunction.java
+++ b/src/de/lmu/ifi/dbs/elki/utilities/scaling/StaticScalingFunction.java
@@ -1,26 +1,28 @@
package de.lmu.ifi.dbs.elki.utilities.scaling;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
/**
* Interface for Scaling functions that do NOT depend on analyzing the data set.
diff --git a/src/de/lmu/ifi/dbs/elki/utilities/scaling/outlier/HeDESNormalizationOutlierScaling.java b/src/de/lmu/ifi/dbs/elki/utilities/scaling/outlier/HeDESNormalizationOutlierScaling.java
index ee02a786..cf880a3f 100644
--- a/src/de/lmu/ifi/dbs/elki/utilities/scaling/outlier/HeDESNormalizationOutlierScaling.java
+++ b/src/de/lmu/ifi/dbs/elki/utilities/scaling/outlier/HeDESNormalizationOutlierScaling.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.utilities.scaling.outlier;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.database.ids.DBID;
import de.lmu.ifi.dbs.elki.math.DoubleMinMax;
diff --git a/src/de/lmu/ifi/dbs/elki/utilities/scaling/outlier/MinusLogGammaScaling.java b/src/de/lmu/ifi/dbs/elki/utilities/scaling/outlier/MinusLogGammaScaling.java
index bc826c01..4b7c7797 100644
--- a/src/de/lmu/ifi/dbs/elki/utilities/scaling/outlier/MinusLogGammaScaling.java
+++ b/src/de/lmu/ifi/dbs/elki/utilities/scaling/outlier/MinusLogGammaScaling.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.utilities.scaling.outlier;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.database.ids.DBID;
import de.lmu.ifi.dbs.elki.math.DoubleMinMax;
diff --git a/src/de/lmu/ifi/dbs/elki/utilities/scaling/outlier/MinusLogStandardDeviationScaling.java b/src/de/lmu/ifi/dbs/elki/utilities/scaling/outlier/MinusLogStandardDeviationScaling.java
index 398c5c96..552de806 100644
--- a/src/de/lmu/ifi/dbs/elki/utilities/scaling/outlier/MinusLogStandardDeviationScaling.java
+++ b/src/de/lmu/ifi/dbs/elki/utilities/scaling/outlier/MinusLogStandardDeviationScaling.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.utilities.scaling.outlier;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.database.ids.DBID;
import de.lmu.ifi.dbs.elki.math.MathUtil;
diff --git a/src/de/lmu/ifi/dbs/elki/utilities/scaling/outlier/MixtureModelOutlierScalingFunction.java b/src/de/lmu/ifi/dbs/elki/utilities/scaling/outlier/MixtureModelOutlierScalingFunction.java
index 535555f0..527429c5 100644
--- a/src/de/lmu/ifi/dbs/elki/utilities/scaling/outlier/MixtureModelOutlierScalingFunction.java
+++ b/src/de/lmu/ifi/dbs/elki/utilities/scaling/outlier/MixtureModelOutlierScalingFunction.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.utilities.scaling.outlier;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.database.ids.ArrayDBIDs;
import de.lmu.ifi.dbs.elki.database.ids.DBID;
diff --git a/src/de/lmu/ifi/dbs/elki/utilities/scaling/outlier/MultiplicativeInverseScaling.java b/src/de/lmu/ifi/dbs/elki/utilities/scaling/outlier/MultiplicativeInverseScaling.java
index 9dc9f192..3e98f49e 100644
--- a/src/de/lmu/ifi/dbs/elki/utilities/scaling/outlier/MultiplicativeInverseScaling.java
+++ b/src/de/lmu/ifi/dbs/elki/utilities/scaling/outlier/MultiplicativeInverseScaling.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.utilities.scaling.outlier;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.database.ids.DBID;
import de.lmu.ifi.dbs.elki.result.outlier.OutlierResult;
diff --git a/src/de/lmu/ifi/dbs/elki/utilities/scaling/outlier/OutlierGammaScaling.java b/src/de/lmu/ifi/dbs/elki/utilities/scaling/outlier/OutlierGammaScaling.java
index 0c282269..25864872 100644
--- a/src/de/lmu/ifi/dbs/elki/utilities/scaling/outlier/OutlierGammaScaling.java
+++ b/src/de/lmu/ifi/dbs/elki/utilities/scaling/outlier/OutlierGammaScaling.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.utilities.scaling.outlier;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.database.ids.DBID;
import de.lmu.ifi.dbs.elki.math.MathUtil;
diff --git a/src/de/lmu/ifi/dbs/elki/utilities/scaling/outlier/OutlierLinearScaling.java b/src/de/lmu/ifi/dbs/elki/utilities/scaling/outlier/OutlierLinearScaling.java
index 12bd77f6..9d55048b 100644
--- a/src/de/lmu/ifi/dbs/elki/utilities/scaling/outlier/OutlierLinearScaling.java
+++ b/src/de/lmu/ifi/dbs/elki/utilities/scaling/outlier/OutlierLinearScaling.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.utilities.scaling.outlier;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.ArrayList;
diff --git a/src/de/lmu/ifi/dbs/elki/utilities/scaling/outlier/OutlierMinusLogScaling.java b/src/de/lmu/ifi/dbs/elki/utilities/scaling/outlier/OutlierMinusLogScaling.java
index 21b9cb21..f1138cdf 100644
--- a/src/de/lmu/ifi/dbs/elki/utilities/scaling/outlier/OutlierMinusLogScaling.java
+++ b/src/de/lmu/ifi/dbs/elki/utilities/scaling/outlier/OutlierMinusLogScaling.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.utilities.scaling.outlier;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.database.ids.DBID;
import de.lmu.ifi.dbs.elki.math.DoubleMinMax;
diff --git a/src/de/lmu/ifi/dbs/elki/utilities/scaling/outlier/OutlierScalingFunction.java b/src/de/lmu/ifi/dbs/elki/utilities/scaling/outlier/OutlierScalingFunction.java
index 878dcf9f..2aa821fe 100644
--- a/src/de/lmu/ifi/dbs/elki/utilities/scaling/outlier/OutlierScalingFunction.java
+++ b/src/de/lmu/ifi/dbs/elki/utilities/scaling/outlier/OutlierScalingFunction.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.utilities.scaling.outlier;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.result.outlier.OutlierResult;
import de.lmu.ifi.dbs.elki.utilities.scaling.ScalingFunction;
diff --git a/src/de/lmu/ifi/dbs/elki/utilities/scaling/outlier/OutlierSqrtScaling.java b/src/de/lmu/ifi/dbs/elki/utilities/scaling/outlier/OutlierSqrtScaling.java
index 1799d1d2..8ccdc8dd 100644
--- a/src/de/lmu/ifi/dbs/elki/utilities/scaling/outlier/OutlierSqrtScaling.java
+++ b/src/de/lmu/ifi/dbs/elki/utilities/scaling/outlier/OutlierSqrtScaling.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.utilities.scaling.outlier;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.database.ids.DBID;
import de.lmu.ifi.dbs.elki.math.DoubleMinMax;
diff --git a/src/de/lmu/ifi/dbs/elki/utilities/scaling/outlier/RankingPseudoOutlierScaling.java b/src/de/lmu/ifi/dbs/elki/utilities/scaling/outlier/RankingPseudoOutlierScaling.java
index 4532771c..d6ef7f5f 100644
--- a/src/de/lmu/ifi/dbs/elki/utilities/scaling/outlier/RankingPseudoOutlierScaling.java
+++ b/src/de/lmu/ifi/dbs/elki/utilities/scaling/outlier/RankingPseudoOutlierScaling.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.utilities.scaling.outlier;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.Arrays;
diff --git a/src/de/lmu/ifi/dbs/elki/utilities/scaling/outlier/SigmoidOutlierScalingFunction.java b/src/de/lmu/ifi/dbs/elki/utilities/scaling/outlier/SigmoidOutlierScalingFunction.java
index a7963591..7363f4f9 100644
--- a/src/de/lmu/ifi/dbs/elki/utilities/scaling/outlier/SigmoidOutlierScalingFunction.java
+++ b/src/de/lmu/ifi/dbs/elki/utilities/scaling/outlier/SigmoidOutlierScalingFunction.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.utilities.scaling.outlier;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.BitSet;
diff --git a/src/de/lmu/ifi/dbs/elki/utilities/scaling/outlier/SqrtStandardDeviationScaling.java b/src/de/lmu/ifi/dbs/elki/utilities/scaling/outlier/SqrtStandardDeviationScaling.java
index adc52414..2c733332 100644
--- a/src/de/lmu/ifi/dbs/elki/utilities/scaling/outlier/SqrtStandardDeviationScaling.java
+++ b/src/de/lmu/ifi/dbs/elki/utilities/scaling/outlier/SqrtStandardDeviationScaling.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.utilities.scaling.outlier;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.database.ids.DBID;
import de.lmu.ifi.dbs.elki.math.DoubleMinMax;
diff --git a/src/de/lmu/ifi/dbs/elki/utilities/scaling/outlier/StandardDeviationScaling.java b/src/de/lmu/ifi/dbs/elki/utilities/scaling/outlier/StandardDeviationScaling.java
index 717f2867..62223730 100644
--- a/src/de/lmu/ifi/dbs/elki/utilities/scaling/outlier/StandardDeviationScaling.java
+++ b/src/de/lmu/ifi/dbs/elki/utilities/scaling/outlier/StandardDeviationScaling.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.utilities.scaling.outlier;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.database.ids.DBID;
import de.lmu.ifi.dbs.elki.math.MathUtil;
diff --git a/src/de/lmu/ifi/dbs/elki/utilities/scaling/outlier/TopKOutlierScaling.java b/src/de/lmu/ifi/dbs/elki/utilities/scaling/outlier/TopKOutlierScaling.java
index ebc25488..5d32dfb5 100644
--- a/src/de/lmu/ifi/dbs/elki/utilities/scaling/outlier/TopKOutlierScaling.java
+++ b/src/de/lmu/ifi/dbs/elki/utilities/scaling/outlier/TopKOutlierScaling.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.utilities.scaling.outlier;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.database.ids.DBID;
import de.lmu.ifi.dbs.elki.logging.LoggingUtil;
diff --git a/src/de/lmu/ifi/dbs/elki/utilities/xml/HTMLUtil.java b/src/de/lmu/ifi/dbs/elki/utilities/xml/HTMLUtil.java
index b47bf645..8ad2ae27 100644
--- a/src/de/lmu/ifi/dbs/elki/utilities/xml/HTMLUtil.java
+++ b/src/de/lmu/ifi/dbs/elki/utilities/xml/HTMLUtil.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.utilities.xml;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.io.IOException;
import java.io.OutputStream;
diff --git a/src/de/lmu/ifi/dbs/elki/utilities/xml/XMLNodeIterator.java b/src/de/lmu/ifi/dbs/elki/utilities/xml/XMLNodeIterator.java
index 1c79737a..320f7478 100644
--- a/src/de/lmu/ifi/dbs/elki/utilities/xml/XMLNodeIterator.java
+++ b/src/de/lmu/ifi/dbs/elki/utilities/xml/XMLNodeIterator.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.utilities.xml;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.Iterator;
diff --git a/src/de/lmu/ifi/dbs/elki/utilities/xml/XMLNodeListIterator.java b/src/de/lmu/ifi/dbs/elki/utilities/xml/XMLNodeListIterator.java
index e582231f..762e9fe6 100644
--- a/src/de/lmu/ifi/dbs/elki/utilities/xml/XMLNodeListIterator.java
+++ b/src/de/lmu/ifi/dbs/elki/utilities/xml/XMLNodeListIterator.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.utilities.xml;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.Iterator;
diff --git a/src/de/lmu/ifi/dbs/elki/visualization/visualizers/VisualizationTask.java b/src/de/lmu/ifi/dbs/elki/visualization/VisualizationTask.java
index bb11f96d..c648a9dd 100644
--- a/src/de/lmu/ifi/dbs/elki/visualization/visualizers/VisualizationTask.java
+++ b/src/de/lmu/ifi/dbs/elki/visualization/VisualizationTask.java
@@ -1,32 +1,34 @@
-package de.lmu.ifi.dbs.elki.visualization.visualizers;
-/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+package de.lmu.ifi.dbs.elki.visualization;
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.database.relation.Relation;
import de.lmu.ifi.dbs.elki.result.Result;
import de.lmu.ifi.dbs.elki.utilities.datastructures.AnyMap;
import de.lmu.ifi.dbs.elki.visualization.projections.Projection;
import de.lmu.ifi.dbs.elki.visualization.svg.SVGPlot;
+import de.lmu.ifi.dbs.elki.visualization.visualizers.VisFactory;
/**
* Container class, with ugly casts to reduce generics crazyness.
@@ -165,17 +167,12 @@ public class VisualizationTask extends AnyMap<String> implements Cloneable, Resu
/**
* Width
*/
- double width;
+ public double width;
/**
* Height
*/
- double height;
-
- /**
- * Stack to plot to (e.g. 1D, 2D, OPTICS, ...)
- */
- Object stack;
+ public double height;
/**
* Visualization task.
@@ -184,15 +181,13 @@ public class VisualizationTask extends AnyMap<String> implements Cloneable, Resu
* @param result Result
* @param relation Relation to use
* @param factory Factory
- * @param stack Stack
*/
- public VisualizationTask(String name, Result result, Relation<?> relation, VisFactory factory, Object stack) {
+ public VisualizationTask(String name, Result result, Relation<?> relation, VisFactory factory) {
super();
this.name = name;
this.result = result;
this.relation = relation;
this.factory = factory;
- this.stack = stack;
}
/**
@@ -203,19 +198,17 @@ public class VisualizationTask extends AnyMap<String> implements Cloneable, Resu
* @param result Result
* @param relation Representation
* @param factory Factory
- * @param stack Stack
* @param proj Projection
* @param svgp Plot
* @param width Width
* @param height Height
*/
- public VisualizationTask(String name, VisualizerContext context, Result result, Relation<?> relation, VisFactory factory, Object stack, Projection proj, SVGPlot svgp, double width, double height) {
+ public VisualizationTask(String name, VisualizerContext context, Result result, Relation<?> relation, VisFactory factory, Projection proj, SVGPlot svgp, double width, double height) {
super();
this.name = name;
this.context = context;
this.result = result;
this.factory = factory;
- this.stack = stack;
this.proj = proj;
this.relation = relation;
this.svgp = svgp;
@@ -276,7 +269,6 @@ public class VisualizationTask extends AnyMap<String> implements Cloneable, Resu
obj.result = result;
obj.proj = proj;
obj.factory = factory;
- obj.stack = stack;
obj.svgp = svgp;
obj.width = width;
obj.height = height;
@@ -368,13 +360,4 @@ public class VisualizationTask extends AnyMap<String> implements Cloneable, Resu
// Also don't inherit equals based on list contents!
return (this == o);
}
-
- /**
- * Get the stacking object for visualizers.
- *
- * @return Type object, supports identity
- */
- public Object getVisualizationStack() {
- return stack;
- }
} \ No newline at end of file
diff --git a/src/de/lmu/ifi/dbs/elki/visualization/visualizers/VisualizerContext.java b/src/de/lmu/ifi/dbs/elki/visualization/VisualizerContext.java
index 3116f857..ed30f3a3 100644
--- a/src/de/lmu/ifi/dbs/elki/visualization/visualizers/VisualizerContext.java
+++ b/src/de/lmu/ifi/dbs/elki/visualization/VisualizerContext.java
@@ -1,29 +1,29 @@
-package de.lmu.ifi.dbs.elki.visualization.visualizers;
-/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+package de.lmu.ifi.dbs.elki.visualization;
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.Collection;
-import java.util.Iterator;
import java.util.List;
import java.util.regex.Pattern;
@@ -44,9 +44,11 @@ import de.lmu.ifi.dbs.elki.result.ResultUtil;
import de.lmu.ifi.dbs.elki.result.SelectionResult;
import de.lmu.ifi.dbs.elki.utilities.datastructures.AnyMap;
import de.lmu.ifi.dbs.elki.utilities.iterator.IterableIterator;
-import de.lmu.ifi.dbs.elki.utilities.iterator.TypeFilterIterator;
+import de.lmu.ifi.dbs.elki.visualization.projector.ProjectorFactory;
import de.lmu.ifi.dbs.elki.visualization.style.PropertiesBasedStyleLibrary;
import de.lmu.ifi.dbs.elki.visualization.style.StyleLibrary;
+import de.lmu.ifi.dbs.elki.visualization.visualizers.VisFactory;
+import de.lmu.ifi.dbs.elki.visualization.visualizers.VisualizerUtil;
import de.lmu.ifi.dbs.elki.visualization.visualizers.events.ContextChangeListener;
import de.lmu.ifi.dbs.elki.visualization.visualizers.events.ContextChangedEvent;
@@ -90,6 +92,11 @@ public class VisualizerContext extends AnyMap<String> implements DataStoreListen
private StyleLibrary stylelib;
/**
+ * Projectors to use
+ */
+ private Collection<ProjectorFactory> projectors;
+
+ /**
* Factories to use
*/
private Collection<VisFactory> factories;
@@ -124,14 +131,17 @@ public class VisualizerContext extends AnyMap<String> implements DataStoreListen
*
* @param result Result
* @param stylelib Style library
+ * @param projectors Projectors to use
* @param factories Visualizer Factories to use
* @param hideVisualizers Pattern to hide visualizers
*/
- public VisualizerContext(HierarchicalResult result, StyleLibrary stylelib, Collection<VisFactory> factories, Pattern hideVisualizers) {
+ public VisualizerContext(HierarchicalResult result, StyleLibrary stylelib, Collection<ProjectorFactory> projectors, Collection<VisFactory> factories, Pattern hideVisualizers) {
super();
this.result = result;
this.stylelib = stylelib;
+ this.projectors = projectors;
this.factories = factories;
+
this.hideVisualizers = hideVisualizers;
List<Clustering<? extends Model>> clusterings = ResultUtil.getClusteringResults(result);
@@ -149,8 +159,7 @@ public class VisualizerContext extends AnyMap<String> implements DataStoreListen
processNewResult(result, result);
// For proxying events.
- // FIXME: RELEASE4
- // this.database.addDataStoreListener(this);
+ ResultUtil.findDatabase(result).addDataStoreListener(this);
// Add ourselves as RL
addResultListener(this);
}
@@ -253,7 +262,8 @@ public class VisualizerContext extends AnyMap<String> implements DataStoreListen
public void setVisualizationVisibility(VisualizationTask task, boolean visibility) {
// Hide other tools
if(visibility && VisualizerUtil.isTool(task)) {
- for(VisualizationTask other : iterVisualizers()) {
+ final Iterable<VisualizationTask> visualizers = ResultUtil.filteredResults(getResult(), VisualizationTask.class);
+ for(VisualizationTask other : visualizers) {
if(other != task && VisualizerUtil.isTool(other) && VisualizerUtil.isVisible(other)) {
other.put(VisualizationTask.META_VISIBLE, false);
getHierarchy().resultChanged(other);
@@ -331,6 +341,17 @@ public class VisualizerContext extends AnyMap<String> implements DataStoreListen
* @param newResult Newly added Result
*/
private void processNewResult(HierarchicalResult baseResult, Result newResult) {
+ for(ProjectorFactory p : projectors) {
+ if(hideVisualizers != null && hideVisualizers.matcher(p.getClass().getName()).find()) {
+ continue;
+ }
+ try {
+ p.processNewResult(baseResult, newResult);
+ }
+ catch(Throwable e) {
+ logger.warning("ProjectorFactory " + p.getClass().getCanonicalName() + " failed:", e);
+ }
+ }
// Collect all visualizers.
for(VisFactory f : factories) {
if(hideVisualizers != null && hideVisualizers.matcher(f.getClass().getName()).find()) {
@@ -340,7 +361,7 @@ public class VisualizerContext extends AnyMap<String> implements DataStoreListen
f.processNewResult(baseResult, newResult);
}
catch(Throwable e) {
- logger.warning("AlgorithmAdapter " + f.getClass().getCanonicalName() + " failed:", e);
+ logger.warning("VisFactory " + f.getClass().getCanonicalName() + " failed:", e);
}
}
}
@@ -349,90 +370,12 @@ public class VisualizerContext extends AnyMap<String> implements DataStoreListen
* Get an iterator over all visualizers.
*
* @return Iterator
- */
- public IterableIterator<VisualizationTask> iterVisualizers() {
- return new VisualizerIterator();
- }
-
- /**
- * Iterator doing a depth-first traversal of the tree.
*
- * @author Erich Schubert
- *
- * @apiviz.exclude
+ * @deprecated Odd semantics: contains duplicates!
*/
- private class VisualizerIterator implements IterableIterator<VisualizationTask> {
- /**
- * The results iterator.
- */
- private Iterator<? extends Result> resultiter = null;
-
- /**
- * Current results visualizers
- */
- private Iterator<VisualizationTask> resultvisiter = null;
-
- /**
- * The current result
- */
- private Result curResult = null;
-
- /**
- * The next item to return.
- */
- private VisualizationTask nextItem = null;
-
- /**
- * Constructor.
- */
- public VisualizerIterator() {
- super();
- this.resultiter = ResultUtil.filteredResults(getResult(), Result.class);
- updateNext();
- }
-
- /**
- * Update the iterator to point to the next element.
- */
- private void updateNext() {
- nextItem = null;
- // try within the current result
- if(resultvisiter != null && resultvisiter.hasNext()) {
- nextItem = resultvisiter.next();
- return;
- }
- if(resultiter != null && resultiter.hasNext()) {
- // advance to next result, retry.
- curResult = resultiter.next();
- final List<Result> children = getHierarchy().getChildren(curResult);
- resultvisiter = new TypeFilterIterator<Result, VisualizationTask>(VisualizationTask.class, children);
- updateNext();
- return;
- }
- // This means we have failed - we'll leave nextItem = null
- }
-
- @Override
- public boolean hasNext() {
- return (nextItem != null);
- }
-
- @Override
- public VisualizationTask next() {
- VisualizationTask vis = nextItem;
- updateNext();
- return vis;
- }
-
- @Override
- public void remove() {
- throw new UnsupportedOperationException("Removals are not supported.");
- }
-
- @Override
- public Iterator<VisualizationTask> iterator() {
- return this;
- }
+ @Deprecated
+ public IterableIterator<VisualizationTask> iterVisualizers() {
+ return ResultUtil.filteredResults(getResult(), VisualizationTask.class);
}
/**
diff --git a/src/de/lmu/ifi/dbs/elki/visualization/visualizers/VisualizerParameterizer.java b/src/de/lmu/ifi/dbs/elki/visualization/VisualizerParameterizer.java
index 437e68fc..7f4dc15d 100644
--- a/src/de/lmu/ifi/dbs/elki/visualization/visualizers/VisualizerParameterizer.java
+++ b/src/de/lmu/ifi/dbs/elki/visualization/VisualizerParameterizer.java
@@ -1,26 +1,27 @@
-package de.lmu.ifi.dbs.elki.visualization.visualizers;
+package de.lmu.ifi.dbs.elki.visualization;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.io.File;
import java.util.ArrayList;
@@ -49,8 +50,10 @@ import de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters.Parameter;
import de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters.PatternParameter;
import de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters.StringParameter;
import de.lmu.ifi.dbs.elki.utilities.pairs.Pair;
+import de.lmu.ifi.dbs.elki.visualization.projector.ProjectorFactory;
import de.lmu.ifi.dbs.elki.visualization.style.PropertiesBasedStyleLibrary;
import de.lmu.ifi.dbs.elki.visualization.style.StyleLibrary;
+import de.lmu.ifi.dbs.elki.visualization.visualizers.VisFactory;
/**
* Utility class to determine the visualizers for a result class.
@@ -111,15 +114,22 @@ public class VisualizerParameterizer implements Parameterizable {
private Pattern hideVisualizers = null;
/**
+ * Projectors to use.
+ */
+ private Collection<ProjectorFactory> projectors;
+
+ /**
* Constructor.
- *
+ *
* @param stylelib Style library
+ * @param projectors Projectors
* @param factories Factories to use
* @param hideVisualizers Visualizer hiding pattern
*/
- public VisualizerParameterizer(StyleLibrary stylelib, Collection<VisFactory> factories, Pattern hideVisualizers) {
+ public VisualizerParameterizer(StyleLibrary stylelib, Collection<ProjectorFactory> projectors, Collection<VisFactory> factories, Pattern hideVisualizers) {
super();
this.stylelib = stylelib;
+ this.projectors = projectors;
this.factories = factories;
this.hideVisualizers = hideVisualizers;
}
@@ -131,7 +141,7 @@ public class VisualizerParameterizer implements Parameterizable {
* @return New context
*/
public VisualizerContext newContext(HierarchicalResult result) {
- VisualizerContext context = new VisualizerContext(result, stylelib, factories, hideVisualizers);
+ VisualizerContext context = new VisualizerContext(result, stylelib, projectors, factories, hideVisualizers);
return context;
}
@@ -210,6 +220,8 @@ public class VisualizerParameterizer implements Parameterizable {
protected Collection<VisFactory> factories = null;
+ protected Collection<ProjectorFactory> projectors = null;
+
@Override
protected void makeOptions(Parameterization config) {
super.makeOptions(config);
@@ -230,32 +242,55 @@ public class VisualizerParameterizer implements Parameterizable {
}
}
MergedParameterization merged = new MergedParameterization(config);
- factories = collectAlgorithmAdapters(merged);
+ projectors = collectProjectorFactorys(merged);
+ factories = collectVisFactorys(merged);
+ }
+
+ /**
+ * Collect and instantiate all projector factories.
+ *
+ * @param config Parameterization
+ * @return List of all adapters found.
+ */
+ private static <O> Collection<ProjectorFactory> collectProjectorFactorys(MergedParameterization config) {
+ ArrayList<ProjectorFactory> factories = new ArrayList<ProjectorFactory>();
+ for(Class<?> c : InspectionUtil.cachedFindAllImplementations(ProjectorFactory.class)) {
+ try {
+ config.rewind();
+ ProjectorFactory a = ClassGenericsUtil.tryInstantiate(ProjectorFactory.class, c, config);
+ factories.add(a);
+ }
+ catch(Throwable e) {
+ logger.exception("Error instantiating visualization factory " + c.getName(), e);
+ }
+ }
+ return factories;
}
/**
- * Collect and instantiate all adapters.
+ * Collect and instantiate all visualizer factories.
*
* @param config Parameterization
* @return List of all adapters found.
*/
- private static <O> Collection<VisFactory> collectAlgorithmAdapters(Parameterization config) {
- ArrayList<VisFactory> algorithmAdapters = new ArrayList<VisFactory>();
+ private static <O> Collection<VisFactory> collectVisFactorys(MergedParameterization config) {
+ ArrayList<VisFactory> factories = new ArrayList<VisFactory>();
for(Class<?> c : InspectionUtil.cachedFindAllImplementations(VisFactory.class)) {
try {
+ config.rewind();
VisFactory a = ClassGenericsUtil.tryInstantiate(VisFactory.class, c, config);
- algorithmAdapters.add(a);
+ factories.add(a);
}
catch(Throwable e) {
logger.exception("Error instantiating visualization factory " + c.getName(), e);
}
}
- return algorithmAdapters;
+ return factories;
}
@Override
protected VisualizerParameterizer makeInstance() {
- return new VisualizerParameterizer(stylelib, factories, hideVisualizers);
+ return new VisualizerParameterizer(stylelib, projectors, factories, hideVisualizers);
}
}
} \ No newline at end of file
diff --git a/src/de/lmu/ifi/dbs/elki/visualization/batikutil/AddCSSClass.java b/src/de/lmu/ifi/dbs/elki/visualization/batikutil/AddCSSClass.java
index 5188c697..068b538a 100644
--- a/src/de/lmu/ifi/dbs/elki/visualization/batikutil/AddCSSClass.java
+++ b/src/de/lmu/ifi/dbs/elki/visualization/batikutil/AddCSSClass.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.visualization.batikutil;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import org.w3c.dom.Element;
import org.w3c.dom.events.Event;
diff --git a/src/de/lmu/ifi/dbs/elki/visualization/batikutil/AttributeModifier.java b/src/de/lmu/ifi/dbs/elki/visualization/batikutil/AttributeModifier.java
index d1764339..f1e62754 100644
--- a/src/de/lmu/ifi/dbs/elki/visualization/batikutil/AttributeModifier.java
+++ b/src/de/lmu/ifi/dbs/elki/visualization/batikutil/AttributeModifier.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.visualization.batikutil;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import org.w3c.dom.Element;
diff --git a/src/de/lmu/ifi/dbs/elki/visualization/batikutil/BatikUtil.java b/src/de/lmu/ifi/dbs/elki/visualization/batikutil/BatikUtil.java
index 610a5de1..f219a0ba 100644
--- a/src/de/lmu/ifi/dbs/elki/visualization/batikutil/BatikUtil.java
+++ b/src/de/lmu/ifi/dbs/elki/visualization/batikutil/BatikUtil.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.visualization.batikutil;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import org.apache.batik.dom.events.DOMMouseEvent;
import org.w3c.dom.Element;
diff --git a/src/de/lmu/ifi/dbs/elki/visualization/batikutil/CSSHoverClass.java b/src/de/lmu/ifi/dbs/elki/visualization/batikutil/CSSHoverClass.java
index ab5c24fb..d65256c0 100644
--- a/src/de/lmu/ifi/dbs/elki/visualization/batikutil/CSSHoverClass.java
+++ b/src/de/lmu/ifi/dbs/elki/visualization/batikutil/CSSHoverClass.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.visualization.batikutil;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import org.apache.batik.util.SVGConstants;
import org.w3c.dom.Element;
diff --git a/src/de/lmu/ifi/dbs/elki/visualization/batikutil/DragableArea.java b/src/de/lmu/ifi/dbs/elki/visualization/batikutil/DragableArea.java
index d3f6a9f3..978aec29 100644
--- a/src/de/lmu/ifi/dbs/elki/visualization/batikutil/DragableArea.java
+++ b/src/de/lmu/ifi/dbs/elki/visualization/batikutil/DragableArea.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.visualization.batikutil;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import org.apache.batik.util.SVGConstants;
import org.w3c.dom.Element;
diff --git a/src/de/lmu/ifi/dbs/elki/visualization/batikutil/JSVGSynchronizedCanvas.java b/src/de/lmu/ifi/dbs/elki/visualization/batikutil/JSVGSynchronizedCanvas.java
index 1c538bc1..a9e467db 100644
--- a/src/de/lmu/ifi/dbs/elki/visualization/batikutil/JSVGSynchronizedCanvas.java
+++ b/src/de/lmu/ifi/dbs/elki/visualization/batikutil/JSVGSynchronizedCanvas.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.visualization.batikutil;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import org.apache.batik.bridge.UpdateManager;
import org.apache.batik.swing.JSVGCanvas;
diff --git a/src/de/lmu/ifi/dbs/elki/visualization/batikutil/JSVGUpdateSynchronizer.java b/src/de/lmu/ifi/dbs/elki/visualization/batikutil/JSVGUpdateSynchronizer.java
index 110f3ab2..96d99002 100644
--- a/src/de/lmu/ifi/dbs/elki/visualization/batikutil/JSVGUpdateSynchronizer.java
+++ b/src/de/lmu/ifi/dbs/elki/visualization/batikutil/JSVGUpdateSynchronizer.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.visualization.batikutil;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.lang.ref.WeakReference;
import java.util.List;
diff --git a/src/de/lmu/ifi/dbs/elki/visualization/batikutil/LazyCanvasResizer.java b/src/de/lmu/ifi/dbs/elki/visualization/batikutil/LazyCanvasResizer.java
index f9bf630c..d11e1b00 100644
--- a/src/de/lmu/ifi/dbs/elki/visualization/batikutil/LazyCanvasResizer.java
+++ b/src/de/lmu/ifi/dbs/elki/visualization/batikutil/LazyCanvasResizer.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.visualization.batikutil;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.awt.Component;
import java.awt.event.ComponentAdapter;
diff --git a/src/de/lmu/ifi/dbs/elki/visualization/batikutil/NodeAppendChild.java b/src/de/lmu/ifi/dbs/elki/visualization/batikutil/NodeAppendChild.java
index f4638cf7..69282a5a 100644
--- a/src/de/lmu/ifi/dbs/elki/visualization/batikutil/NodeAppendChild.java
+++ b/src/de/lmu/ifi/dbs/elki/visualization/batikutil/NodeAppendChild.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.visualization.batikutil;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import org.w3c.dom.Element;
diff --git a/src/de/lmu/ifi/dbs/elki/visualization/batikutil/NodeReplaceChild.java b/src/de/lmu/ifi/dbs/elki/visualization/batikutil/NodeReplaceChild.java
index be0db41c..0b5049cb 100644
--- a/src/de/lmu/ifi/dbs/elki/visualization/batikutil/NodeReplaceChild.java
+++ b/src/de/lmu/ifi/dbs/elki/visualization/batikutil/NodeReplaceChild.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.visualization.batikutil;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import org.w3c.dom.Element;
diff --git a/src/de/lmu/ifi/dbs/elki/visualization/batikutil/NodeReplacer.java b/src/de/lmu/ifi/dbs/elki/visualization/batikutil/NodeReplacer.java
index 63a8965e..51b1fec8 100644
--- a/src/de/lmu/ifi/dbs/elki/visualization/batikutil/NodeReplacer.java
+++ b/src/de/lmu/ifi/dbs/elki/visualization/batikutil/NodeReplacer.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.visualization.batikutil;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import org.w3c.dom.Element;
diff --git a/src/de/lmu/ifi/dbs/elki/visualization/batikutil/RemoveCSSClass.java b/src/de/lmu/ifi/dbs/elki/visualization/batikutil/RemoveCSSClass.java
index 18cb74db..9c16a2db 100644
--- a/src/de/lmu/ifi/dbs/elki/visualization/batikutil/RemoveCSSClass.java
+++ b/src/de/lmu/ifi/dbs/elki/visualization/batikutil/RemoveCSSClass.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.visualization.batikutil;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import org.w3c.dom.Element;
import org.w3c.dom.events.Event;
diff --git a/src/de/lmu/ifi/dbs/elki/visualization/colors/ColorLibrary.java b/src/de/lmu/ifi/dbs/elki/visualization/colors/ColorLibrary.java
index fa2caa62..0741d9b3 100644
--- a/src/de/lmu/ifi/dbs/elki/visualization/colors/ColorLibrary.java
+++ b/src/de/lmu/ifi/dbs/elki/visualization/colors/ColorLibrary.java
@@ -1,26 +1,28 @@
package de.lmu.ifi.dbs.elki.visualization.colors;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
/**
* Color scheme interface
diff --git a/src/de/lmu/ifi/dbs/elki/visualization/colors/ListBasedColorLibrary.java b/src/de/lmu/ifi/dbs/elki/visualization/colors/ListBasedColorLibrary.java
index 3b782e7a..4785fb87 100644
--- a/src/de/lmu/ifi/dbs/elki/visualization/colors/ListBasedColorLibrary.java
+++ b/src/de/lmu/ifi/dbs/elki/visualization/colors/ListBasedColorLibrary.java
@@ -1,26 +1,28 @@
package de.lmu.ifi.dbs.elki.visualization.colors;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
/**
diff --git a/src/de/lmu/ifi/dbs/elki/visualization/css/CSSClass.java b/src/de/lmu/ifi/dbs/elki/visualization/css/CSSClass.java
index 196d5f83..33dfe5f4 100644
--- a/src/de/lmu/ifi/dbs/elki/visualization/css/CSSClass.java
+++ b/src/de/lmu/ifi/dbs/elki/visualization/css/CSSClass.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.visualization.css;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.lang.ref.WeakReference;
import java.util.ArrayList;
diff --git a/src/de/lmu/ifi/dbs/elki/visualization/css/CSSClassManager.java b/src/de/lmu/ifi/dbs/elki/visualization/css/CSSClassManager.java
index 9c109a0f..de527e4e 100644
--- a/src/de/lmu/ifi/dbs/elki/visualization/css/CSSClassManager.java
+++ b/src/de/lmu/ifi/dbs/elki/visualization/css/CSSClassManager.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.visualization.css;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.Collection;
import java.util.HashMap;
diff --git a/src/de/lmu/ifi/dbs/elki/visualization/gui/ResultVisualizer.java b/src/de/lmu/ifi/dbs/elki/visualization/gui/ResultVisualizer.java
index 28988d4a..aa5cd2b4 100644
--- a/src/de/lmu/ifi/dbs/elki/visualization/gui/ResultVisualizer.java
+++ b/src/de/lmu/ifi/dbs/elki/visualization/gui/ResultVisualizer.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.visualization.gui;
-/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import javax.swing.JFrame;
@@ -32,13 +33,10 @@ import de.lmu.ifi.dbs.elki.result.ResultHandler;
import de.lmu.ifi.dbs.elki.result.ResultUtil;
import de.lmu.ifi.dbs.elki.utilities.optionhandling.AbstractParameterizer;
import de.lmu.ifi.dbs.elki.utilities.optionhandling.OptionID;
-import de.lmu.ifi.dbs.elki.utilities.optionhandling.constraints.GreaterEqualConstraint;
import de.lmu.ifi.dbs.elki.utilities.optionhandling.parameterization.Parameterization;
-import de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters.IntParameter;
import de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters.StringParameter;
-import de.lmu.ifi.dbs.elki.visualization.gui.overview.OverviewPlot;
-import de.lmu.ifi.dbs.elki.visualization.visualizers.VisualizerContext;
-import de.lmu.ifi.dbs.elki.visualization.visualizers.VisualizerParameterizer;
+import de.lmu.ifi.dbs.elki.visualization.VisualizerContext;
+import de.lmu.ifi.dbs.elki.visualization.VisualizerParameterizer;
/**
* Handler to process and visualize a Result.
@@ -69,15 +67,6 @@ public class ResultVisualizer implements ResultHandler {
public static final OptionID WINDOW_TITLE_ID = OptionID.getOrCreateOptionID("vis.window.title", "Title to use for visualization window.");
/**
- * Parameter for the maximum number of dimensions,
- *
- * <p>
- * Code: -vis.maxdim
- * </p>
- */
- public static final OptionID MAXDIM_ID = OptionID.getOrCreateOptionID("vis.maxdim", "Maximum number of dimensions to display.");
-
- /**
* Stores the set title.
*/
String title;
@@ -88,11 +77,6 @@ public class ResultVisualizer implements ResultHandler {
protected final static String DEFAULT_TITLE = "ELKI Result Visualization";
/**
- * Stores the maximum number of dimensions to show.
- */
- int maxdim = OverviewPlot.MAX_DIMENSIONS_DEFAULT;
-
- /**
* Visualization manager.
*/
VisualizerParameterizer manager;
@@ -101,13 +85,11 @@ public class ResultVisualizer implements ResultHandler {
* Constructor.
*
* @param title
- * @param maxdim
* @param manager
*/
- public ResultVisualizer(String title, int maxdim, VisualizerParameterizer manager) {
+ public ResultVisualizer(String title, VisualizerParameterizer manager) {
super();
this.title = title;
- this.maxdim = maxdim;
this.manager = manager;
}
@@ -132,10 +114,9 @@ public class ResultVisualizer implements ResultHandler {
@Override
public void run() {
try {
- ResultWindow window = new ResultWindow(title, db, top, maxdim, context);
+ ResultWindow window = new ResultWindow(title, top, context);
window.setVisible(true);
window.setExtendedState(window.getExtendedState() | JFrame.MAXIMIZED_BOTH);
- window.update();
window.showOverview();
}
catch(Throwable e) {
@@ -159,11 +140,6 @@ public class ResultVisualizer implements ResultHandler {
String title;
/**
- * Stores the maximum number of dimensions to show.
- */
- int maxdim = OverviewPlot.MAX_DIMENSIONS_DEFAULT;
-
- /**
* Visualization manager.
*/
VisualizerParameterizer manager;
@@ -176,16 +152,12 @@ public class ResultVisualizer implements ResultHandler {
title = titleP.getValue();
}
- IntParameter maxdimP = new IntParameter(MAXDIM_ID, new GreaterEqualConstraint(1), OverviewPlot.MAX_DIMENSIONS_DEFAULT);
- if(config.grab(maxdimP)) {
- maxdim = maxdimP.getValue();
- }
manager = config.tryInstantiate(VisualizerParameterizer.class);
}
@Override
protected ResultVisualizer makeInstance() {
- return new ResultVisualizer(title, maxdim, manager);
+ return new ResultVisualizer(title, manager);
}
}
} \ No newline at end of file
diff --git a/src/de/lmu/ifi/dbs/elki/visualization/gui/ResultWindow.java b/src/de/lmu/ifi/dbs/elki/visualization/gui/ResultWindow.java
index 4f25a520..a3b8a458 100644
--- a/src/de/lmu/ifi/dbs/elki/visualization/gui/ResultWindow.java
+++ b/src/de/lmu/ifi/dbs/elki/visualization/gui/ResultWindow.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.visualization.gui;
-/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.awt.BorderLayout;
import java.awt.Dimension;
@@ -31,6 +32,7 @@ import java.awt.event.ItemEvent;
import java.awt.event.ItemListener;
import java.awt.event.KeyEvent;
+import javax.swing.ImageIcon;
import javax.swing.JCheckBoxMenuItem;
import javax.swing.JFrame;
import javax.swing.JMenu;
@@ -40,12 +42,15 @@ import javax.swing.JPanel;
import javax.swing.JRadioButtonMenuItem;
import javax.swing.SwingUtilities;
-import de.lmu.ifi.dbs.elki.database.Database;
+import de.lmu.ifi.dbs.elki.KDDTask;
import de.lmu.ifi.dbs.elki.logging.Logging;
+import de.lmu.ifi.dbs.elki.result.HierarchicalResult;
import de.lmu.ifi.dbs.elki.result.Result;
import de.lmu.ifi.dbs.elki.result.ResultAdapter;
import de.lmu.ifi.dbs.elki.result.ResultHierarchy;
import de.lmu.ifi.dbs.elki.result.ResultListener;
+import de.lmu.ifi.dbs.elki.visualization.VisualizationTask;
+import de.lmu.ifi.dbs.elki.visualization.VisualizerContext;
import de.lmu.ifi.dbs.elki.visualization.batikutil.JSVGSynchronizedCanvas;
import de.lmu.ifi.dbs.elki.visualization.batikutil.LazyCanvasResizer;
import de.lmu.ifi.dbs.elki.visualization.gui.detail.DetailView;
@@ -53,8 +58,6 @@ import de.lmu.ifi.dbs.elki.visualization.gui.overview.DetailViewSelectedEvent;
import de.lmu.ifi.dbs.elki.visualization.gui.overview.OverviewPlot;
import de.lmu.ifi.dbs.elki.visualization.savedialog.SVGSaveDialog;
import de.lmu.ifi.dbs.elki.visualization.svg.SVGPlot;
-import de.lmu.ifi.dbs.elki.visualization.visualizers.VisualizationTask;
-import de.lmu.ifi.dbs.elki.visualization.visualizers.VisualizerContext;
import de.lmu.ifi.dbs.elki.visualization.visualizers.VisualizerUtil;
/**
@@ -128,18 +131,19 @@ public class ResultWindow extends JFrame implements ResultListener {
*/
private DetailView currentSubplot = null;
- private Result result;
+ /**
+ * Result to visualize
+ */
+ private HierarchicalResult result;
/**
* Constructor.
*
* @param title Window title
- * @param db Database
* @param result Result to visualize
- * @param maxdim Maximal dimensionality to show.
* @param context Visualizer context
*/
- public ResultWindow(String title, Database db, Result result, int maxdim, VisualizerContext context) {
+ public ResultWindow(String title, HierarchicalResult result, VisualizerContext context) {
super(title);
this.context = context;
this.result = result;
@@ -147,6 +151,14 @@ public class ResultWindow extends JFrame implements ResultListener {
// close handler
this.setDefaultCloseOperation(JFrame.DISPOSE_ON_CLOSE);
+ // ELKI icon
+ try {
+ setIconImage(new ImageIcon(KDDTask.class.getResource("elki-icon.png")).getImage());
+ }
+ catch(Exception e) {
+ // Ignore - icon not found is not fatal.
+ }
+
// setup buttons
exportItem = new JMenuItem("Export");
exportItem.setMnemonic(KeyEvent.VK_E);
@@ -194,7 +206,8 @@ public class ResultWindow extends JFrame implements ResultListener {
filemenu.setMnemonic(KeyEvent.VK_F);
filemenu.add(overviewItem);
filemenu.add(exportItem);
- filemenu.add(editItem);
+ // FIXME: re-add when it is working again.
+ // filemenu.add(editItem);
filemenu.add(quitItem);
menubar.add(filemenu);
@@ -209,7 +222,7 @@ public class ResultWindow extends JFrame implements ResultListener {
this.getContentPane().add(panel);
- this.overview = new OverviewPlot(db, result, maxdim, context);
+ this.overview = new OverviewPlot(result, context);
// when a subplot is clicked, show the selected subplot.
overview.addActionListener(new ActionListener() {
@Override
@@ -339,7 +352,7 @@ public class ResultWindow extends JFrame implements ResultListener {
// currentSubplot.redraw();
showPlot(currentSubplot);
}
- overview.refresh();
+ overview.lazyRefresh();
}
/**
diff --git a/src/de/lmu/ifi/dbs/elki/visualization/gui/SelectionTableWindow.java b/src/de/lmu/ifi/dbs/elki/visualization/gui/SelectionTableWindow.java
index 6762205c..c2190e63 100644
--- a/src/de/lmu/ifi/dbs/elki/visualization/gui/SelectionTableWindow.java
+++ b/src/de/lmu/ifi/dbs/elki/visualization/gui/SelectionTableWindow.java
@@ -28,6 +28,7 @@ import java.awt.event.ActionListener;
import java.util.Collections;
import java.util.Set;
+import javax.swing.ImageIcon;
import javax.swing.JButton;
import javax.swing.JFrame;
import javax.swing.JPanel;
@@ -35,12 +36,12 @@ import javax.swing.JScrollPane;
import javax.swing.JTable;
import javax.swing.table.AbstractTableModel;
+import de.lmu.ifi.dbs.elki.KDDTask;
import de.lmu.ifi.dbs.elki.data.ClassLabel;
import de.lmu.ifi.dbs.elki.data.SimpleClassLabel;
import de.lmu.ifi.dbs.elki.database.Database;
import de.lmu.ifi.dbs.elki.database.UpdatableDatabase;
import de.lmu.ifi.dbs.elki.database.datastore.DataStoreEvent;
-import de.lmu.ifi.dbs.elki.database.datastore.DataStoreEvent.Type;
import de.lmu.ifi.dbs.elki.database.datastore.DataStoreListener;
import de.lmu.ifi.dbs.elki.database.ids.ArrayModifiableDBIDs;
import de.lmu.ifi.dbs.elki.database.ids.DBID;
@@ -54,7 +55,7 @@ import de.lmu.ifi.dbs.elki.result.ResultListener;
import de.lmu.ifi.dbs.elki.result.ResultUtil;
import de.lmu.ifi.dbs.elki.result.SelectionResult;
import de.lmu.ifi.dbs.elki.utilities.exceptions.AbortException;
-import de.lmu.ifi.dbs.elki.visualization.visualizers.VisualizerContext;
+import de.lmu.ifi.dbs.elki.visualization.VisualizerContext;
/**
* Visualizes selected Objects in a JTable, objects can be selected, changed and
@@ -132,6 +133,14 @@ public class SelectionTableWindow extends JFrame implements DataStoreListener, R
*/
public SelectionTableWindow(VisualizerContext context) {
super(NAME);
+ // ELKI icon
+ try {
+ setIconImage(new ImageIcon(KDDTask.class.getResource("elki-icon.png")).getImage());
+ }
+ catch(Exception e) {
+ // Ignore - icon not found is not fatal.
+ }
+
this.context = context;
this.database = ResultUtil.findDatabase(context.getResult());
// FIXME: re-add labels
@@ -342,8 +351,9 @@ public class SelectionTableWindow extends JFrame implements DataStoreListener, R
@Override
public void contentChanged(DataStoreEvent e) {
- Set<Type> eventTypes = e.getTypes();
- if(eventTypes.size() == 1 && eventTypes.iterator().next().equals(Type.UPDATE)) {
+ // Use fully qualified names to avoid JDK7 bug.
+ Set<de.lmu.ifi.dbs.elki.database.datastore.DataStoreEvent.Type> eventTypes = e.getTypes();
+ if(eventTypes.size() == 1 && eventTypes.iterator().next().equals(de.lmu.ifi.dbs.elki.database.datastore.DataStoreEvent.Type.UPDATE)) {
dotTableModel.fireTableDataChanged();
}
else {
diff --git a/src/de/lmu/ifi/dbs/elki/visualization/gui/SimpleSVGViewer.java b/src/de/lmu/ifi/dbs/elki/visualization/gui/SimpleSVGViewer.java
index 2bb6cf5f..e249eed3 100644
--- a/src/de/lmu/ifi/dbs/elki/visualization/gui/SimpleSVGViewer.java
+++ b/src/de/lmu/ifi/dbs/elki/visualization/gui/SimpleSVGViewer.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.visualization.gui;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.awt.BorderLayout;
import java.awt.Dimension;
diff --git a/src/de/lmu/ifi/dbs/elki/visualization/gui/detail/DetailView.java b/src/de/lmu/ifi/dbs/elki/visualization/gui/detail/DetailView.java
index b5513c09..99bbc78d 100644
--- a/src/de/lmu/ifi/dbs/elki/visualization/gui/detail/DetailView.java
+++ b/src/de/lmu/ifi/dbs/elki/visualization/gui/detail/DetailView.java
@@ -1,29 +1,29 @@
package de.lmu.ifi.dbs.elki.visualization.gui.detail;
-/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.ArrayList;
-import java.util.Collections;
import java.util.HashMap;
import java.util.Map;
import java.util.Map.Entry;
@@ -35,6 +35,9 @@ import de.lmu.ifi.dbs.elki.logging.Logging;
import de.lmu.ifi.dbs.elki.logging.LoggingUtil;
import de.lmu.ifi.dbs.elki.result.Result;
import de.lmu.ifi.dbs.elki.result.ResultListener;
+import de.lmu.ifi.dbs.elki.utilities.iterator.IterableUtil;
+import de.lmu.ifi.dbs.elki.visualization.VisualizationTask;
+import de.lmu.ifi.dbs.elki.visualization.VisualizerContext;
import de.lmu.ifi.dbs.elki.visualization.batikutil.AttributeModifier;
import de.lmu.ifi.dbs.elki.visualization.css.CSSClass;
import de.lmu.ifi.dbs.elki.visualization.gui.overview.PlotItem;
@@ -42,8 +45,6 @@ import de.lmu.ifi.dbs.elki.visualization.style.StyleLibrary;
import de.lmu.ifi.dbs.elki.visualization.svg.SVGPlot;
import de.lmu.ifi.dbs.elki.visualization.svg.SVGUtil;
import de.lmu.ifi.dbs.elki.visualization.visualizers.Visualization;
-import de.lmu.ifi.dbs.elki.visualization.visualizers.VisualizationTask;
-import de.lmu.ifi.dbs.elki.visualization.visualizers.VisualizerContext;
import de.lmu.ifi.dbs.elki.visualization.visualizers.VisualizerUtil;
/**
@@ -99,7 +100,7 @@ public class DetailView extends SVGPlot implements ResultListener {
this.visi = vis;
this.ratio = ratio;
- Collections.sort(this.visi);
+ this.visi.sort();
// TODO: only do this when there is an interactive visualizer?
setDisableInteractions(true);
@@ -131,22 +132,15 @@ public class DetailView extends SVGPlot implements ResultListener {
getDocument().getRootElement().appendChild(bg);
}
- // TODO: protected?
protected void redraw() {
- // TODO: Clear root children
- // Warning: do not remove style and similar elements!
- // while (getRoot().hasChildNodes()) {
- // getRoot().removeChild(getRoot().getFirstChild());
- // }
destroyVisualizations();
- // Collections.sort(layers, new VisualizationInfoComparator());
width = getRatio();
height = 1.0;
- ArrayList<Visualization> layers = new ArrayList<Visualization>(visi.size());
+ ArrayList<Visualization> layers = new ArrayList<Visualization>();
// TODO: center/arrange visualizations?
- for(VisualizationTask task : visi) {
+ for(VisualizationTask task : IterableUtil.fromIterator(visi.visIterator())) {
if(VisualizerUtil.isVisible(task)) {
try {
Visualization v = task.getFactory().makeVisualization(task.clone(this, context, visi.proj, width, height));
@@ -263,9 +257,6 @@ public class DetailView extends SVGPlot implements ResultListener {
if(!(current instanceof VisualizationTask)) {
return;
}
- if(!visi.contains(current)) {
- return;
- }
// Get the layer
final VisualizationTask task = (VisualizationTask) current;
Visualization vis = layermap.get(task);
diff --git a/src/de/lmu/ifi/dbs/elki/visualization/gui/overview/DetailViewSelectedEvent.java b/src/de/lmu/ifi/dbs/elki/visualization/gui/overview/DetailViewSelectedEvent.java
index 0ea59547..085fc262 100644
--- a/src/de/lmu/ifi/dbs/elki/visualization/gui/overview/DetailViewSelectedEvent.java
+++ b/src/de/lmu/ifi/dbs/elki/visualization/gui/overview/DetailViewSelectedEvent.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.visualization.gui.overview;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.awt.event.ActionEvent;
@@ -44,14 +45,9 @@ public class DetailViewSelectedEvent extends ActionEvent {
OverviewPlot overview;
/**
- * X Coordinate
- */
- double x;
-
- /**
- * X Coordinate
+ * Plot item selected
*/
- double y;
+ PlotItem it;
/**
* Constructor. To be called by OverviewPlot only!
@@ -60,14 +56,12 @@ public class DetailViewSelectedEvent extends ActionEvent {
* @param id ID
* @param command command that was invoked
* @param modifiers modifiers
- * @param x x click
- * @param y y click
+ * @param it Plot item selected
*/
- public DetailViewSelectedEvent(OverviewPlot source, int id, String command, int modifiers, double x, double y) {
+ public DetailViewSelectedEvent(OverviewPlot source, int id, String command, int modifiers, PlotItem it) {
super(source, id, command, modifiers);
this.overview = source;
- this.x = x;
- this.y = y;
+ this.it = it;
}
/**
@@ -76,6 +70,6 @@ public class DetailViewSelectedEvent extends ActionEvent {
* @return materialized detail plot
*/
public DetailView makeDetailView() {
- return overview.makeDetailView(x, y);
+ return overview.makeDetailView(it);
}
} \ No newline at end of file
diff --git a/src/de/lmu/ifi/dbs/elki/visualization/gui/overview/OverviewPlot.java b/src/de/lmu/ifi/dbs/elki/visualization/gui/overview/OverviewPlot.java
index 6fd1f0f8..5c8b8d44 100644
--- a/src/de/lmu/ifi/dbs/elki/visualization/gui/overview/OverviewPlot.java
+++ b/src/de/lmu/ifi/dbs/elki/visualization/gui/overview/OverviewPlot.java
@@ -1,32 +1,35 @@
package de.lmu.ifi.dbs.elki.visualization.gui.overview;
-/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.awt.event.ActionEvent;
import java.awt.event.ActionListener;
import java.util.ArrayList;
+import java.util.Collection;
import java.util.HashMap;
-import java.util.List;
+import java.util.Iterator;
+import java.util.Map.Entry;
import org.apache.batik.util.SVGConstants;
import org.w3c.dom.Element;
@@ -34,33 +37,24 @@ import org.w3c.dom.events.Event;
import org.w3c.dom.events.EventListener;
import org.w3c.dom.events.EventTarget;
-import de.lmu.ifi.dbs.elki.data.NumberVector;
-import de.lmu.ifi.dbs.elki.data.type.TypeUtil;
-import de.lmu.ifi.dbs.elki.database.Database;
-import de.lmu.ifi.dbs.elki.database.relation.Relation;
+import de.lmu.ifi.dbs.elki.logging.Logging;
import de.lmu.ifi.dbs.elki.logging.LoggingUtil;
-import de.lmu.ifi.dbs.elki.math.linearalgebra.AffineTransformation;
+import de.lmu.ifi.dbs.elki.result.HierarchicalResult;
import de.lmu.ifi.dbs.elki.result.Result;
+import de.lmu.ifi.dbs.elki.result.ResultHierarchy;
import de.lmu.ifi.dbs.elki.result.ResultListener;
-import de.lmu.ifi.dbs.elki.utilities.DatabaseUtil;
+import de.lmu.ifi.dbs.elki.result.ResultUtil;
import de.lmu.ifi.dbs.elki.utilities.pairs.Pair;
+import de.lmu.ifi.dbs.elki.visualization.VisualizationTask;
+import de.lmu.ifi.dbs.elki.visualization.VisualizerContext;
import de.lmu.ifi.dbs.elki.visualization.batikutil.CSSHoverClass;
import de.lmu.ifi.dbs.elki.visualization.css.CSSClass;
import de.lmu.ifi.dbs.elki.visualization.gui.detail.DetailView;
-import de.lmu.ifi.dbs.elki.visualization.projections.AffineProjection;
-import de.lmu.ifi.dbs.elki.visualization.projections.Projection1D;
-import de.lmu.ifi.dbs.elki.visualization.projections.Projection2D;
-import de.lmu.ifi.dbs.elki.visualization.projections.Simple1D;
-import de.lmu.ifi.dbs.elki.visualization.projections.Simple2D;
-import de.lmu.ifi.dbs.elki.visualization.scales.LinearScale;
-import de.lmu.ifi.dbs.elki.visualization.scales.Scales;
+import de.lmu.ifi.dbs.elki.visualization.projector.Projector;
import de.lmu.ifi.dbs.elki.visualization.svg.SVGPlot;
import de.lmu.ifi.dbs.elki.visualization.svg.SVGUtil;
import de.lmu.ifi.dbs.elki.visualization.visualizers.Visualization;
-import de.lmu.ifi.dbs.elki.visualization.visualizers.VisualizationTask;
-import de.lmu.ifi.dbs.elki.visualization.visualizers.VisualizerContext;
import de.lmu.ifi.dbs.elki.visualization.visualizers.VisualizerUtil;
-import de.lmu.ifi.dbs.elki.visualization.visualizers.visunproj.LabelVisFactory;
/**
* Generate an overview plot for a set of visualizations.
@@ -77,16 +71,9 @@ import de.lmu.ifi.dbs.elki.visualization.visualizers.visunproj.LabelVisFactory;
*/
public class OverviewPlot extends SVGPlot implements ResultListener {
/**
- * Maximum number of dimensions to visualize.
- *
- * TODO: Erich: add scrolling function for higher dimensionality!
+ * Our logging class
*/
- public static final int MAX_DIMENSIONS_DEFAULT = 10;
-
- /**
- * Stores the maximum number of dimensions to show.
- */
- private int maxdim = MAX_DIMENSIONS_DEFAULT;
+ private static final Logging logger = Logging.getLogger(OverviewPlot.class);
/**
* Visualizer context
@@ -94,20 +81,14 @@ public class OverviewPlot extends SVGPlot implements ResultListener {
private VisualizerContext context;
/**
- * Database we work on.
- */
- private Database db;
-
- /**
* Result we work on. Currently unused, but kept for future requirements.
*/
- @SuppressWarnings("unused")
- private Result result;
+ private HierarchicalResult result;
/**
* Map of coordinates to plots.
*/
- protected PlotMap<NumberVector<?, ?>> plotmap;
+ protected RectangleArranger<PlotItem> plotmap;
/**
* Action listeners for this plot.
@@ -117,15 +98,11 @@ public class OverviewPlot extends SVGPlot implements ResultListener {
/**
* Constructor.
*
- * @param db Database
* @param result Result to visualize
- * @param maxdim Maximum number of dimensions
* @param context Visualizer context
*/
- public OverviewPlot(Database db, Result result, int maxdim, VisualizerContext context) {
+ public OverviewPlot(HierarchicalResult result, VisualizerContext context) {
super();
- this.maxdim = maxdim;
- this.db = db;
this.result = result;
this.context = context;
// register context listener
@@ -173,105 +150,49 @@ public class OverviewPlot extends SVGPlot implements ResultListener {
private double ratio = 1.0;
/**
+ * Pending refresh, for lazy refreshing
+ */
+ Runnable pendingRefresh;
+
+ /**
+ * Reinitialize on refresh
+ */
+ private boolean reinitOnRefresh = true;
+
+ /**
* Recompute the layout of visualizations.
*/
private void arrangeVisualizations() {
- // split the visualizers into three sets.
- // FIXME: THIS IS VERY UGLY, and needs to be refactored.
- // (This is a remainder of merging adapters and visualizationfactories)
- List<VisualizationTask> vis = new ArrayList<VisualizationTask>();
- for(VisualizationTask task : context.iterVisualizers()) {
- vis.add(task);
- }
- // We'll use three regions for now:
- // 2D projections starting at 0,0 and going right and down.
- // 1D projections starting at 0, -1 and going right
- // Other projections starting at -1, min() and going down.
- plotmap = new PlotMap<NumberVector<?, ?>>();
- // FIXME: ugly cast used here.
- Relation<NumberVector<?, ?>> dvdb = db.getRelation(TypeUtil.DOUBLE_VECTOR_FIELD);
- LinearScale[] scales = null;
- scales = Scales.calcScales(dvdb);
- int dmax = Math.min(DatabaseUtil.dimensionality(dvdb), maxdim);
- for(int d1 = 1; d1 <= dmax; d1++) {
- for(int d2 = d1 + 1; d2 <= dmax; d2++) {
- Projection2D proj = new Simple2D(scales, d1, d2);
-
- for(VisualizationTask task : vis) {
- if(task.getFactory().getProjectionType() == Projection2D.class) {
- plotmap.addVis(d1 - 1, d2 - 2, 1., 1., proj, task);
- }
- }
+ plotmap = new RectangleArranger<PlotItem>(ratio);
+
+ ArrayList<Projector> projectors = ResultUtil.filterResults(result, Projector.class);
+ // Rectangle layout
+ for(Projector p : projectors) {
+ Collection<PlotItem> projs = p.arrange();
+ for(PlotItem it : projs) {
+ plotmap.put(it.w, it.h, it);
}
}
- if(dmax >= 3) {
- AffineTransformation p = AffineProjection.axisProjection(DatabaseUtil.dimensionality(dvdb), 1, 2);
- p.addRotation(0, 2, Math.PI / 180 * -10.);
- p.addRotation(1, 2, Math.PI / 180 * 15.);
- // Wanna try 4d? go ahead:
- // p.addRotation(0, 3, Math.PI / 180 * -20.);
- // p.addRotation(1, 3, Math.PI / 180 * 30.);
- final double sizeh = Math.ceil((dmax - 1) / 2.0);
- Projection2D proj = new AffineProjection(scales, p);
- for(VisualizationTask task : vis) {
- if(task.getFactory().getProjectionType() == Projection2D.class) {
- plotmap.addVis(Math.ceil((dmax - 1) / 2.0), 0.0, sizeh, sizeh, proj, task);
- }
- }
- }
- // insert column numbers
- for(int d1 = 1; d1 <= dmax; d1++) {
- VisualizationTask colvi = new VisualizationTask("", context, null, null, new LabelVisFactory(Integer.toString(d1)), null, null, this, 1, .1);
- colvi.put(VisualizationTask.META_NODETAIL, true);
- plotmap.addVis(d1 - 1, -.1, 1., .1, null, colvi);
- }
- // insert row numbers
- for(int d1 = 2; d1 <= dmax; d1++) {
- VisualizationTask colvi = new VisualizationTask("", context, null, null, new LabelVisFactory(Integer.toString(d1)), null, null, this, .1, 1);
- colvi.put(VisualizationTask.META_NODETAIL, true);
- plotmap.addVis(-.1, d1 - 2, .1, 1., null, colvi);
- }
- {
- int dim = dmax;
- for(int d1 = 1; d1 <= dim; d1++) {
- Projection1D proj = new Simple1D(scales, d1);
- double ypos = -.1;
- for(VisualizationTask task : vis) {
- if(task.getFactory().getProjectionType() == Projection1D.class) {
- // TODO: 1d vis might have a different native scaling.
- double height = 0.5;
- plotmap.addVis(d1 - 1, ypos - height, 1.0, height, proj, task);
- //ypos = ypos - height;
- }
+
+ ResultHierarchy hier = result.getHierarchy();
+ ArrayList<VisualizationTask> tasks = ResultUtil.filterResults(result, VisualizationTask.class);
+ for(VisualizationTask task : tasks) {
+ boolean isprojected = false;
+ for(Result parent : hier.getParents(task)) {
+ if(parent instanceof Projector) {
+ isprojected = true;
+ break;
}
}
- }
- {
- HashMap<Object, double[]> stackmap = new HashMap<Object, double[]>();
- // find starting position.
- Double pos = plotmap.minmaxy.getMin();
- if(pos == null) {
- pos = 0.0;
- }
- // FIXME: use multiple columns!
- for(VisualizationTask task : vis) {
- if(task.getFactory().getProjectionType() == Projection1D.class) {
- continue;
- }
- if(task.getFactory().getProjectionType() == Projection2D.class) {
- continue;
- }
- double[] p = null;
- if(task.getVisualizationStack() != null) {
- p = stackmap.get(task.getVisualizationStack());
+ if(!isprojected) {
+ if(task.getWidth() <= 0.0 || task.getHeight() <= 0.0) {
+ logger.warning("Task with improper size information: " + task);
}
- if(p == null) {
- p = new double[] { -1.1, pos };
- pos += 1.0;
- stackmap.put(task.getVisualizationStack(), p);
+ else {
+ PlotItem it = new PlotItem(task.getWidth(), task.getHeight(), null);
+ it.visualizations.add(task);
+ plotmap.put(it.w, it.h, it);
}
- // TODO: might have different scaling preferences
- plotmap.addVis(p[0], p[1], 1., 1., null, task);
}
}
}
@@ -279,7 +200,7 @@ public class OverviewPlot extends SVGPlot implements ResultListener {
/**
* Refresh the overview plot.
*/
- public void reinitialize() {
+ private void reinitialize() {
setupHoverer();
arrangeVisualizations();
recalcViewbox();
@@ -305,32 +226,37 @@ public class OverviewPlot extends SVGPlot implements ResultListener {
final int thumbsize = (int) Math.max(screenwidth / plotmap.getWidth(), screenheight / plotmap.getHeight());
// TODO: kill all children in document root except style, defs etc?
- for(PlotItem it : plotmap.values()) {
- boolean hasDetails = false;
- Element g = this.svgElement(SVGConstants.SVG_G_TAG);
- SVGUtil.setAtt(g, SVGConstants.SVG_TRANSFORM_ATTRIBUTE, "translate(" + it.x + " " + it.y + ")");
- for(VisualizationTask task : it) {
- Element parent = this.svgElement(SVGConstants.SVG_G_TAG);
- g.appendChild(parent);
- makeThumbnail(thumbsize, it, task, parent);
- vistoelem.put(new Pair<PlotItem, VisualizationTask>(it, task), parent);
-
- if(VisualizerUtil.detailsEnabled(task)) {
- hasDetails = true;
+ for(Entry<PlotItem, double[]> e : plotmap.entrySet()) {
+ final double basex = e.getValue()[0];
+ final double basey = e.getValue()[1];
+ for(Iterator<PlotItem> iter = e.getKey().itemIterator(); iter.hasNext();) {
+ PlotItem it = iter.next();
+ boolean hasDetails = false;
+ Element g = this.svgElement(SVGConstants.SVG_G_TAG);
+ SVGUtil.setAtt(g, SVGConstants.SVG_TRANSFORM_ATTRIBUTE, "translate(" + (basex + it.x) + " " + (basey + it.y) + ")");
+ for(VisualizationTask task : it.visualizations) {
+ Element parent = this.svgElement(SVGConstants.SVG_G_TAG);
+ g.appendChild(parent);
+ makeThumbnail(thumbsize, it, task, parent);
+ vistoelem.put(new Pair<PlotItem, VisualizationTask>(it, task), parent);
+
+ if(VisualizerUtil.detailsEnabled(task)) {
+ hasDetails = true;
+ }
+ }
+ plotlayer.appendChild(g);
+ if(hasDetails) {
+ Element hover = this.svgRect(basex + it.x, basey + it.y, it.w, it.h);
+ SVGUtil.addCSSClass(hover, selcss.getName());
+ // link hoverer.
+ EventTarget targ = (EventTarget) hover;
+ targ.addEventListener(SVGConstants.SVG_MOUSEOVER_EVENT_TYPE, hoverer, false);
+ targ.addEventListener(SVGConstants.SVG_MOUSEOUT_EVENT_TYPE, hoverer, false);
+ targ.addEventListener(SVGConstants.SVG_CLICK_EVENT_TYPE, hoverer, false);
+ targ.addEventListener(SVGConstants.SVG_CLICK_EVENT_TYPE, new SelectPlotEvent(it), false);
+
+ hoverlayer.appendChild(hover);
}
- }
- plotlayer.appendChild(g);
- if(hasDetails) {
- Element hover = this.svgRect(it.x, it.y, it.w, it.h);
- SVGUtil.addCSSClass(hover, selcss.getName());
- // link hoverer.
- EventTarget targ = (EventTarget) hover;
- targ.addEventListener(SVGConstants.SVG_MOUSEOVER_EVENT_TYPE, hoverer, false);
- targ.addEventListener(SVGConstants.SVG_MOUSEOUT_EVENT_TYPE, hoverer, false);
- targ.addEventListener(SVGConstants.SVG_CLICK_EVENT_TYPE, hoverer, false);
- targ.addEventListener(SVGConstants.SVG_CLICK_EVENT_TYPE, new SelectPlotEvent(it.x, it.y), false);
-
- hoverlayer.appendChild(hover);
}
}
getRoot().appendChild(plotlayer);
@@ -364,38 +290,47 @@ public class OverviewPlot extends SVGPlot implements ResultListener {
/**
* Do a refresh (when visibilities have changed).
*/
- public void refresh() {
- if(vistoelem == null || plotlayer == null || hoverlayer == null) {
+ synchronized void refresh() {
+ logger.debug("Refresh");
+ if(vistoelem == null || plotlayer == null || hoverlayer == null || reinitOnRefresh) {
reinitialize();
+ reinitOnRefresh = false;
}
else {
+ boolean refreshcss = false;
final int thumbsize = (int) Math.max(screenwidth / plotmap.getWidth(), screenheight / plotmap.getHeight());
- for(PlotItem it : plotmap.values()) {
- for(VisualizationTask task : it) {
- Element gg = vistoelem.get(new Pair<PlotItem, VisualizationTask>(it, task));
- if(gg == null) {
- LoggingUtil.warning("No container element found for " + task);
+ for(Entry<PlotItem, double[]> ent : plotmap.entrySet()) {
+ PlotItem it = ent.getKey();
+ for(Iterator<VisualizationTask> iter = it.visIterator(); iter.hasNext(); ) {
+ VisualizationTask task = iter.next();
+ Element parent = vistoelem.get(new Pair<PlotItem, VisualizationTask>(it, task));
+ if(parent == null) {
+ LoggingUtil.warning("No container element produced by " + task);
continue;
}
if(VisualizerUtil.thumbnailEnabled(task) && VisualizerUtil.isVisible(task)) {
// unhide when hidden.
- if(gg.hasAttribute(SVGConstants.CSS_VISIBILITY_PROPERTY)) {
- gg.removeAttribute(SVGConstants.CSS_VISIBILITY_PROPERTY);
+ if(parent.hasAttribute(SVGConstants.CSS_VISIBILITY_PROPERTY)) {
+ parent.removeAttribute(SVGConstants.CSS_VISIBILITY_PROPERTY);
}
// if not yet rendered, add a thumbnail
- if(!gg.hasChildNodes()) {
- makeThumbnail(thumbsize, it, task, gg);
+ if(!parent.hasChildNodes()) {
+ makeThumbnail(thumbsize, it, task, parent);
+ refreshcss = true;
}
}
else {
// hide if there is anything to hide.
- if(gg != null && gg.hasChildNodes()) {
- gg.setAttribute(SVGConstants.CSS_VISIBILITY_PROPERTY, SVGConstants.CSS_HIDDEN_VALUE);
+ if(parent != null && parent.hasChildNodes()) {
+ parent.setAttribute(SVGConstants.CSS_VISIBILITY_PROPERTY, SVGConstants.CSS_HIDDEN_VALUE);
}
// TODO: unqueue pending thumbnails
}
}
}
+ if(refreshcss) {
+ updateStyleElement();
+ }
}
}
@@ -404,7 +339,7 @@ public class OverviewPlot extends SVGPlot implements ResultListener {
*/
private void recalcViewbox() {
// Recalculate bounding box.
- String vb = plotmap.minmaxx.getMin() + " " + plotmap.minmaxy.getMin() + " " + plotmap.getWidth() + " " + plotmap.getHeight();
+ String vb = "0 0 " + plotmap.getWidth() + " " + plotmap.getHeight();
// Reset root bounding box.
SVGUtil.setAtt(getRoot(), SVGConstants.SVG_WIDTH_ATTRIBUTE, "20cm");
SVGUtil.setAtt(getRoot(), SVGConstants.SVG_HEIGHT_ATTRIBUTE, (20 / plotmap.getWidth() * plotmap.getHeight()) + "cm");
@@ -432,13 +367,11 @@ public class OverviewPlot extends SVGPlot implements ResultListener {
/**
* Event triggered when a plot was selected.
*
- * @param x X coordinate
- * @param y Y coordinate
+ * @param it Plot item selected
* @return sub plot
*/
- public DetailView makeDetailView(double x, double y) {
- PlotItem layers = plotmap.get(x, y);
- return new DetailView(context, layers, ratio);
+ public DetailView makeDetailView(PlotItem it) {
+ return new DetailView(context, it, ratio);
}
/**
@@ -453,13 +386,12 @@ public class OverviewPlot extends SVGPlot implements ResultListener {
/**
* When a subplot was selected, forward the event to listeners.
*
- * @param x X coordinate
- * @param y Y coordinate
+ * @param it PlotItem selected
*/
- protected void triggerSubplotSelectEvent(double x, double y) {
+ protected void triggerSubplotSelectEvent(PlotItem it) {
// forward event to all listeners.
for(ActionListener actionListener : actionListeners) {
- actionListener.actionPerformed(new DetailViewSelectedEvent(this, ActionEvent.ACTION_PERFORMED, null, 0, x, y));
+ actionListener.actionPerformed(new DetailViewSelectedEvent(this, ActionEvent.ACTION_PERFORMED, null, 0, it));
}
}
@@ -472,30 +404,23 @@ public class OverviewPlot extends SVGPlot implements ResultListener {
*/
public class SelectPlotEvent implements EventListener {
/**
- * X coordinate of box.
- */
- double x;
-
- /**
- * Y coordinate of box.
+ * Plot item clicked
*/
- double y;
+ PlotItem it;
/**
* Constructor.
*
- * @param x coordinate
- * @param y coordinate
+ * @param it Item that was clicked
*/
- public SelectPlotEvent(double x, double y) {
+ public SelectPlotEvent(PlotItem it) {
super();
- this.x = x;
- this.y = y;
+ this.it = it;
}
@Override
public void handleEvent(@SuppressWarnings("unused") Event evt) {
- triggerSubplotSelectEvent(x, y);
+ triggerSubplotSelectEvent(it);
}
}
@@ -522,27 +447,43 @@ public class OverviewPlot extends SVGPlot implements ResultListener {
this.ratio = ratio;
}
+ /**
+ * Trigger a redraw, but avoid excessive redraws.
+ */
+ public final void lazyRefresh() {
+ Runnable pr = new Runnable() {
+ @Override
+ public void run() {
+ if(OverviewPlot.this.pendingRefresh == this) {
+ OverviewPlot.this.pendingRefresh = null;
+ OverviewPlot.this.refresh();
+ }
+ }
+ };
+ pendingRefresh = pr;
+ scheduleUpdate(pr);
+ }
+
@SuppressWarnings("unused")
@Override
public void resultAdded(Result child, Result parent) {
- // TODO: be lazy
- if (child instanceof VisualizationTask) {
- reinitialize();
+ logger.debug("result added: " + child);
+ if(child instanceof VisualizationTask) {
+ reinitOnRefresh = true;
}
- refresh();
+ lazyRefresh();
}
- @SuppressWarnings("unused")
@Override
public void resultChanged(Result current) {
- // TODO: be lazy
- refresh();
+ logger.debug("result changed: " + current);
+ lazyRefresh();
}
@SuppressWarnings("unused")
@Override
public void resultRemoved(Result child, Result parent) {
- // TODO: be lazy
- refresh();
+ logger.debug("result removed: " + child);
+ lazyRefresh();
}
} \ No newline at end of file
diff --git a/src/de/lmu/ifi/dbs/elki/visualization/gui/overview/PlotItem.java b/src/de/lmu/ifi/dbs/elki/visualization/gui/overview/PlotItem.java
index 3d58d10d..cd8f5b3e 100644
--- a/src/de/lmu/ifi/dbs/elki/visualization/gui/overview/PlotItem.java
+++ b/src/de/lmu/ifi/dbs/elki/visualization/gui/overview/PlotItem.java
@@ -1,31 +1,36 @@
package de.lmu.ifi.dbs.elki.visualization.gui.overview;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
+import java.util.Collection;
+import java.util.Collections;
+import java.util.Iterator;
import java.util.LinkedList;
+import java.util.List;
+import de.lmu.ifi.dbs.elki.visualization.VisualizationTask;
import de.lmu.ifi.dbs.elki.visualization.projections.Projection;
-import de.lmu.ifi.dbs.elki.visualization.visualizers.VisualizationTask;
/**
* Item to collect visualization tasks on a specific position on the plot map.
@@ -36,12 +41,7 @@ import de.lmu.ifi.dbs.elki.visualization.visualizers.VisualizationTask;
*
* @apiviz.composedOf Projection
*/
-public class PlotItem extends LinkedList<VisualizationTask> {
- /**
- * Serial version
- */
- private static final long serialVersionUID = 1L;
-
+public class PlotItem {
/**
* Position: x
*/
@@ -66,7 +66,28 @@ public class PlotItem extends LinkedList<VisualizationTask> {
* Projection (may be {@code null}!)
*/
public final Projection proj;
-
+
+ /**
+ * The visualizations at this location
+ */
+ public List<VisualizationTask> visualizations = new LinkedList<VisualizationTask>();
+
+ /**
+ * Subitems to plot
+ */
+ public Collection<PlotItem> subitems = new LinkedList<PlotItem>();
+
+ /**
+ * Constructor.
+ *
+ * @param w Position: w
+ * @param h Position: h
+ * @param proj Projection
+ */
+ public PlotItem(double w, double h, Projection proj) {
+ this(0, 0, w, h, proj);
+ }
+
/**
* Constructor.
*
@@ -85,9 +106,130 @@ public class PlotItem extends LinkedList<VisualizationTask> {
this.proj = proj;
}
- @Override
- public int hashCode() {
- // We can't have our hashcode change with the list contents!
- return System.identityHashCode(this);
+ /**
+ * Sort all visualizers for their proper drawing order
+ */
+ public void sort() {
+ Collections.sort(visualizations);
+ for(PlotItem subitem : subitems) {
+ subitem.sort();
+ }
+ }
+
+ /**
+ * Iterate (recursively) over all visualizations.
+ *
+ * @return Iterator
+ */
+ public Iterator<VisualizationTask> visIterator() {
+ return new VisItr();
+ }
+
+ /**
+ * Iterate (recursively) over all plot items, including itself.
+ *
+ * @return Iterator
+ */
+ public Iterator<PlotItem> itemIterator() {
+ return new ItmItr();
+ }
+
+ /**
+ * Recursive iterator
+ *
+ * @author Erich Schubert
+ *
+ * @apiviz.exclude
+ */
+ private class VisItr implements Iterator<VisualizationTask> {
+ Iterator<VisualizationTask> cur;
+
+ Iterator<PlotItem> sub;
+
+ /**
+ * Constructor.
+ */
+ public VisItr() {
+ super();
+ this.cur = visualizations.iterator();
+ this.sub = subitems.iterator();
+ }
+
+ @Override
+ public boolean hasNext() {
+ if(cur.hasNext()) {
+ return true;
+ }
+ if(sub.hasNext()) {
+ cur = sub.next().visIterator();
+ return hasNext();
+ }
+ return false;
+ }
+
+ @Override
+ public VisualizationTask next() {
+ hasNext();
+ return cur.next();
+ }
+
+ @Override
+ public void remove() {
+ throw new UnsupportedOperationException();
+ }
+ }
+
+ /**
+ * Recursive iterator
+ *
+ * @author Erich Schubert
+ *
+ * @apiviz.exclude
+ */
+ private class ItmItr implements Iterator<PlotItem> {
+ PlotItem next;
+
+ Iterator<PlotItem> cur;
+
+ Iterator<PlotItem> sub;
+
+ /**
+ * Constructor.
+ */
+ public ItmItr() {
+ super();
+ this.next = PlotItem.this;
+ this.cur = null;
+ this.sub = subitems.iterator();
+ }
+
+ @Override
+ public boolean hasNext() {
+ if(next != null) {
+ return true;
+ }
+ if (cur != null && cur.hasNext()) {
+ next = cur.next();
+ return true;
+ }
+ if(sub.hasNext()) {
+ cur = sub.next().itemIterator();
+ return hasNext();
+ }
+ return false;
+ }
+
+ @Override
+ public PlotItem next() {
+ hasNext();
+ PlotItem ret = next;
+ next = null;
+ return ret;
+ }
+
+ @Override
+ public void remove() {
+ throw new UnsupportedOperationException();
+ }
}
} \ No newline at end of file
diff --git a/src/de/lmu/ifi/dbs/elki/visualization/gui/overview/PlotMap.java b/src/de/lmu/ifi/dbs/elki/visualization/gui/overview/PlotMap.java
deleted file mode 100644
index 40d67c06..00000000
--- a/src/de/lmu/ifi/dbs/elki/visualization/gui/overview/PlotMap.java
+++ /dev/null
@@ -1,124 +0,0 @@
-package de.lmu.ifi.dbs.elki.visualization.gui.overview;
-/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
-
-import java.util.HashMap;
-
-import de.lmu.ifi.dbs.elki.logging.LoggingUtil;
-import de.lmu.ifi.dbs.elki.math.DoubleMinMax;
-import de.lmu.ifi.dbs.elki.utilities.pairs.DoubleDoublePair;
-import de.lmu.ifi.dbs.elki.visualization.projections.Projection;
-import de.lmu.ifi.dbs.elki.visualization.visualizers.VisualizationTask;
-
-/**
- * Manage the Overview plot canvas.
- *
- * @author Erich Schubert
- *
- * @apiviz.composedOf PlotItem
- */
-class PlotMap<NV> extends HashMap<DoubleDoublePair, PlotItem> {
- /**
- * Serial version
- */
- private static final long serialVersionUID = 1L;
-
- /**
- * X coordinates seen
- */
- DoubleMinMax minmaxx = new DoubleMinMax();
-
- /**
- * Y coordinates seen
- */
- DoubleMinMax minmaxy = new DoubleMinMax();
-
- /**
- * Constructor.
- */
- PlotMap() {
- super();
- }
-
- /**
- * Place a new visualization on the chart.
- *
- * @param x X coordinate
- * @param y Y coordinate
- * @param w Width
- * @param h Height
- * @param v Visualization
- */
- void addVis(double x, double y, double w, double h, Projection proj, VisualizationTask v) {
- final DoubleDoublePair pos = new DoubleDoublePair(x, y);
- PlotItem l = this.get(pos);
- if(l == null) {
- l = new PlotItem(x, y, w, h, proj);
- this.put(pos, l);
- }
- else {
- // Sanity check
- if(l.w != w || l.h != h) {
- LoggingUtil.warning("Layout error - different object sizes at the same map position!");
- }
- if(l.proj != proj) {
- LoggingUtil.warning("Layout error - two different projections used at the same map position.");
- }
- }
- l.add(v);
- // Update min/max
- minmaxx.put(x);
- minmaxx.put(x + w);
- minmaxy.put(y);
- minmaxy.put(y + h);
- }
-
- /**
- * Get the visualization on the given coordinates.
- *
- * @param x First coordinate
- * @param y Second coordinate
- * @return Visualizations at this position.
- */
- PlotItem get(double x, double y) {
- return this.get(new DoubleDoublePair(x, y));
- }
-
- /**
- * Get width in plot units
- *
- * @return width
- */
- public double getWidth() {
- return minmaxx.getMax() - minmaxx.getMin();
- }
-
- /**
- * Get height in plot units.
- *
- * @return height
- */
- public double getHeight() {
- return minmaxy.getMax() - minmaxy.getMin();
- }
-} \ No newline at end of file
diff --git a/src/de/lmu/ifi/dbs/elki/visualization/gui/overview/RectangleArranger.java b/src/de/lmu/ifi/dbs/elki/visualization/gui/overview/RectangleArranger.java
new file mode 100644
index 00000000..ad87c3fc
--- /dev/null
+++ b/src/de/lmu/ifi/dbs/elki/visualization/gui/overview/RectangleArranger.java
@@ -0,0 +1,491 @@
+package de.lmu.ifi.dbs.elki.visualization.gui.overview;
+
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
+
+import java.util.ArrayList;
+import java.util.Collections;
+import java.util.HashMap;
+import java.util.Map;
+import java.util.Map.Entry;
+import java.util.Set;
+import java.util.logging.Level;
+
+import de.lmu.ifi.dbs.elki.logging.Logging;
+
+/**
+ * This is a rather naive rectangle arrangement class. It will try to place
+ * rectangles on a canvas while maintaining the canvas size ratio as good as
+ * possible. It does not do an exhaustive search for optimizing the layout, but
+ * a greedy placement strategy, extending the canvas as little as possible.
+ *
+ * @author Erich Schubert
+ *
+ * @param <T> Key type
+ */
+public class RectangleArranger<T> {
+ /**
+ * Logging class
+ */
+ private static final Logging logger = Logging.getLogger(RectangleArranger.class);
+
+ /**
+ * Target height/width ratio
+ */
+ private double ratio = 1.0;
+
+ /**
+ * Width
+ */
+ private double twidth = 1.0;
+
+ /**
+ * Height
+ */
+ private double theight = 1.0;
+
+ /**
+ * Column widths
+ */
+ private ArrayList<Double> widths = new ArrayList<Double>();
+
+ /**
+ * Column heights
+ */
+ private ArrayList<Double> heights = new ArrayList<Double>();
+
+ /**
+ * Bit sets to store usage. ArrayList = y, BitSet = x
+ */
+ private ArrayList<ArrayList<Object>> usage = new ArrayList<ArrayList<Object>>();
+
+ /**
+ * Data
+ */
+ private Map<T, double[]> map = new HashMap<T, double[]>();
+
+ /**
+ * Constructor.
+ *
+ * @param ratio
+ */
+ public RectangleArranger(double ratio) {
+ this(ratio, 1.0);
+ }
+
+ /**
+ * Constructor.
+ *
+ * @param width Canvas width
+ * @param height Canvas height
+ */
+ public RectangleArranger(double width, double height) {
+ this.ratio = width / height;
+ this.twidth = width;
+ this.theight = height;
+ this.widths.add(width);
+ this.heights.add(height);
+ // setup usage matrix
+ ArrayList<Object> u = new ArrayList<Object>();
+ u.add(null);
+ this.usage.add(u);
+ assertConsistent();
+ }
+
+ /**
+ * Add a new recangle.
+ *
+ * @param w Width
+ * @param h Height
+ * @param data Data object to add (key)
+ */
+ public void put(double w, double h, T data) {
+ logger.finest("Add: " + w + "x" + h);
+ final int cols = widths.size();
+ final int rows = heights.size();
+
+ int bestsx = -1;
+ int bestsy = -1;
+ int bestex = cols - 1;
+ int bestey = -1;
+ double bestwi;
+ double besthi;
+ double bestinc;
+ // Baseline: grow by adding to the top or to the right.
+ {
+ double i1 = computeIncreaseArea(w, Math.max(0, h - theight));
+ double i2 = computeIncreaseArea(Math.max(0, w - twidth), h);
+ if(i1 < i2) {
+ bestwi = w;
+ besthi = Math.max(0, h - theight);
+ bestinc = i1;
+ }
+ else {
+ bestwi = Math.max(0, w - twidth);
+ besthi = h;
+ bestinc = i2;
+ }
+ }
+ // Find position with minimum increase
+ for(int sy = 0; sy < rows; sy++) {
+ for(int sx = 0; sx < cols; sx++) {
+ if(usage.get(sy).get(sx) != null) {
+ continue;
+ }
+ // Start with single cell
+ double avw = widths.get(sx);
+ double avh = heights.get(sy);
+ int ex = sx;
+ int ey = sy;
+ while(avw < w || avh < h) {
+ // Grow width first
+ if(avw / avh < w / h) {
+ if(avw < w && ex + 1 < cols) {
+ boolean ok = true;
+ // All unused?
+ for(int y = sy; y <= ey; y++) {
+ if(usage.get(y).get(ex + 1) != null) {
+ ok = false;
+ }
+ }
+ if(ok) {
+ ex += 1;
+ avw += widths.get(ex);
+ continue;
+ }
+ }
+ if(avh < h && ey + 1 < rows) {
+ boolean ok = true;
+ // All unused?
+ for(int x = sx; x <= ex; x++) {
+ if(usage.get(ey + 1).get(x) != null) {
+ ok = false;
+ }
+ }
+ if(ok) {
+ ey += 1;
+ avh += heights.get(ey);
+ continue;
+ }
+ }
+ }
+ else { // Grow height first
+ if(avh < h && ey + 1 < rows) {
+ boolean ok = true;
+ // All unused?
+ for(int x = sx; x <= ex; x++) {
+ if(usage.get(ey + 1).get(x) != null) {
+ ok = false;
+ }
+ }
+ if(ok) {
+ ey += 1;
+ avh += heights.get(ey);
+ continue;
+ }
+ }
+ if(avw < w && ex + 1 < cols) {
+ boolean ok = true;
+ // All unused?
+ for(int y = sy; y <= ey; y++) {
+ if(usage.get(y).get(ex + 1) != null) {
+ ok = false;
+ }
+ }
+ if(ok) {
+ ex += 1;
+ avw += widths.get(ex);
+ continue;
+ }
+ }
+ }
+ break;
+ }
+ // Good match, or extension possible?
+ if(avw < w && ex < cols - 1) {
+ continue;
+ }
+ if(avh < h && ey < rows - 1) {
+ continue;
+ }
+ // Compute increase:
+ double winc = Math.max(0.0, w - avw);
+ double hinc = Math.max(0.0, h - avh);
+ double inc = computeIncreaseArea(winc, hinc);
+
+ logger.debugFinest("Candidate: " + sx + "," + sy + " - " + ex + "," + ey + ": " + avw + "x" + avh + " " + inc);
+ if(inc < bestinc) {
+ bestinc = inc;
+ bestsx = sx;
+ bestsy = sy;
+ bestex = ex;
+ bestey = ey;
+ bestwi = w - avw;
+ besthi = h - avh;
+ }
+ if(inc == 0) {
+ // Can't find better
+ // TODO: try to do less splitting maybe?
+ break;
+ }
+ }
+ assert assertConsistent();
+ }
+ logger.debugFinest("Best: " + bestsx + "," + bestsy + " - " + bestex + "," + bestey + " inc: " + bestwi + "x" + besthi + " " + bestinc);
+ // Need to split a column.
+ // TODO: find best column to split. Currently: last
+ if(bestwi < 0) {
+ splitCol(bestex, -bestwi);
+ bestwi = 0.0;
+ }
+ // Need to split a row.
+ // TODO: find best row to split. Currently: last
+ if(besthi < 0) {
+ splitRow(bestey, -besthi);
+ besthi = 0.0;
+ }
+ // Need to increase the total area
+ if(bestinc > 0) {
+ assert (bestex == cols - 1 || bestey == rows - 1);
+ double inc = Math.max(bestwi, besthi * ratio);
+ resize(inc);
+
+ // Resubmit
+ put(w, h, data);
+ return;
+ }
+ for(int x = bestsx; x <= bestex; x++) {
+ for(int y = bestsy; y <= bestey; y++) {
+ usage.get(y).set(x, data);
+ }
+ }
+ double xpos = 0.0;
+ double ypos = 0.0;
+ {
+ for(int x = 0; x < bestsx; x++) {
+ xpos += widths.get(x);
+ }
+ for(int y = 0; y < bestsy; y++) {
+ ypos += heights.get(y);
+ }
+ }
+ map.put(data, new double[] { xpos, ypos, w, h });
+ if(logger.isDebuggingFinest()) {
+ logSizes();
+ }
+ }
+
+ protected double computeIncreaseArea(double winc, double hinc) {
+ double inc = Math.max(winc, hinc * ratio);
+ inc = inc * (hinc + inc / ratio + winc / ratio);
+ return inc;
+ }
+
+ protected void splitRow(int bestey, double besthi) {
+ logger.debugFine("Split row " + bestey);
+ heights.add(bestey + 1, besthi);
+ heights.set(bestey, heights.get(bestey) - besthi);
+ // Update used map
+ usage.add(bestey + 1, new ArrayList<Object>(usage.get(bestey)));
+ }
+
+ protected void splitCol(int bestex, double bestwi) {
+ final int rows = heights.size();
+ logger.debugFine("Split column " + bestex);
+ widths.add(bestex + 1, bestwi);
+ widths.set(bestex, widths.get(bestex) - bestwi);
+ // Update used map
+ for(int y = 0; y < rows; y++) {
+ usage.get(y).add(bestex + 1, usage.get(y).get(bestex));
+ }
+ assert assertConsistent();
+ }
+
+ private void resize(double inc) {
+ final int cols = widths.size();
+ final int rows = heights.size();
+ logger.debugFine("Resize by " + inc + "x" + (inc / ratio));
+ if(logger.isDebuggingFinest()) {
+ logSizes();
+ }
+ // TODO: if the last row or column is empty, we can do this simpler
+ widths.add(inc);
+ twidth += inc;
+ heights.add(inc / ratio);
+ theight += inc / ratio;
+ // Add column:
+ for(int y = 0; y < rows; y++) {
+ usage.get(y).add(null);
+ }
+ // Add row:
+ {
+ ArrayList<Object> row = new ArrayList<Object>();
+ for(int x = 0; x <= cols; x++) {
+ row.add(null);
+ }
+ usage.add(row);
+ }
+ assert assertConsistent();
+ if(logger.isDebuggingFinest()) {
+ logSizes();
+ }
+ }
+
+ /**
+ * Get the position data of the object
+ *
+ * @param object Query object
+ * @return Position information: x,y,w,h
+ */
+ public double[] get(T object) {
+ double[] v = map.get(object);
+ if(v == null) {
+ return null;
+ }
+ return v.clone();
+ }
+
+ private boolean assertConsistent() {
+ final int cols = widths.size();
+ final int rows = heights.size();
+ {
+ double wsum = 0.0;
+ for(int x = 0; x < cols; x++) {
+ assert (widths.get(x) > 0);
+ wsum += widths.get(x);
+ }
+ assert (Math.abs(wsum - twidth) < 1E-10);
+ }
+ {
+ double hsum = 0.0;
+ for(int y = 0; y < rows; y++) {
+ assert (heights.get(y) > 0);
+ hsum += heights.get(y);
+ }
+ assert (Math.abs(hsum - theight) < 1E-10);
+ }
+ {
+ assert (usage.size() == rows);
+ for(int y = 0; y < rows; y++) {
+ assert (usage.get(y).size() == cols);
+ }
+ }
+ return true;
+ }
+
+ public void logSizes() {
+ StringBuffer buf = new StringBuffer();
+ final int cols = widths.size();
+ final int rows = heights.size();
+ {
+ buf.append("Widths: ");
+ for(int x = 0; x < cols; x++) {
+ if(x > 0) {
+ buf.append(", ");
+ }
+ buf.append(widths.get(x));
+ }
+ buf.append("\n");
+ }
+ {
+ buf.append("Heights: ");
+ for(int y = 0; y < rows; y++) {
+ if(y > 0) {
+ buf.append(", ");
+ }
+ buf.append(heights.get(y));
+ }
+ buf.append("\n");
+ }
+ {
+ for(int y = 0; y < rows; y++) {
+ for(int x = 0; x < cols; x++) {
+ buf.append(usage.get(y).get(x) != null ? "X" : "_");
+ }
+ buf.append("|\n");
+ }
+ for(int x = 0; x < cols; x++) {
+ buf.append("-");
+ }
+ buf.append("+\n");
+ }
+ logger.debug(buf);
+ }
+
+ /**
+ * Get the total canvas width
+ *
+ * @return Width
+ */
+ public double getWidth() {
+ return twidth;
+ }
+
+ /**
+ * Get the total canvas height
+ *
+ * @return Height
+ */
+ public double getHeight() {
+ return theight;
+ }
+
+ /**
+ * The items contained in the map.
+ *
+ * @return entry set
+ */
+ public Set<Entry<T, double[]>> entrySet() {
+ return Collections.unmodifiableSet(map.entrySet());
+ }
+
+ /**
+ * Test method.
+ *
+ * @param args
+ */
+ public static void main(String[] args) {
+ logger.getWrappedLogger().setLevel(Level.FINEST);
+ RectangleArranger<String> r = new RectangleArranger<String>(1.3);
+ r.put(4., 1., "Histogram");
+ r.put(4., 4., "3D view");
+ r.put(1., 1., "Meta 1");
+ r.put(1., 1., "Meta 2");
+ r.put(1., 1., "Meta 3");
+ r.put(2., 2., "Meta 4");
+ r.put(2., 2., "Meta 5");
+
+ r = new RectangleArranger<String>(3., 3.);
+ r.put(1., 2., "A");
+ r.put(2., 1., "B");
+ r.put(1., 2., "C");
+ r.put(2., 1., "D");
+ r.put(2., 2., "E");
+
+ r = new RectangleArranger<String>(4 - 2.6521739130434785);
+ r.put(4., .5, "A");
+ r.put(4., 3., "B");
+ r.put(4., 1., "C");
+ r.put(1., .1, "D");
+ }
+}
diff --git a/src/de/lmu/ifi/dbs/elki/visualization/opticsplot/OPTICSColorAdapter.java b/src/de/lmu/ifi/dbs/elki/visualization/opticsplot/OPTICSColorAdapter.java
index e9f6abc9..5fdad225 100644
--- a/src/de/lmu/ifi/dbs/elki/visualization/opticsplot/OPTICSColorAdapter.java
+++ b/src/de/lmu/ifi/dbs/elki/visualization/opticsplot/OPTICSColorAdapter.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.visualization.opticsplot;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.result.optics.ClusterOrderEntry;
diff --git a/src/de/lmu/ifi/dbs/elki/visualization/opticsplot/OPTICSColorFromClustering.java b/src/de/lmu/ifi/dbs/elki/visualization/opticsplot/OPTICSColorFromClustering.java
index 511d25e3..c69dabd0 100644
--- a/src/de/lmu/ifi/dbs/elki/visualization/opticsplot/OPTICSColorFromClustering.java
+++ b/src/de/lmu/ifi/dbs/elki/visualization/opticsplot/OPTICSColorFromClustering.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.visualization.opticsplot;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.awt.Color;
import java.util.HashMap;
diff --git a/src/de/lmu/ifi/dbs/elki/visualization/opticsplot/OPTICSColorStatic.java b/src/de/lmu/ifi/dbs/elki/visualization/opticsplot/OPTICSColorStatic.java
index 0371edfd..359d3062 100644
--- a/src/de/lmu/ifi/dbs/elki/visualization/opticsplot/OPTICSColorStatic.java
+++ b/src/de/lmu/ifi/dbs/elki/visualization/opticsplot/OPTICSColorStatic.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.visualization.opticsplot;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.result.optics.ClusterOrderEntry;
diff --git a/src/de/lmu/ifi/dbs/elki/visualization/opticsplot/OPTICSCorrelationDimensionalityDistance.java b/src/de/lmu/ifi/dbs/elki/visualization/opticsplot/OPTICSCorrelationDimensionalityDistance.java
index 230b3779..3e8835b1 100644
--- a/src/de/lmu/ifi/dbs/elki/visualization/opticsplot/OPTICSCorrelationDimensionalityDistance.java
+++ b/src/de/lmu/ifi/dbs/elki/visualization/opticsplot/OPTICSCorrelationDimensionalityDistance.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.visualization.opticsplot;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.distance.distancevalue.CorrelationDistance;
import de.lmu.ifi.dbs.elki.result.optics.ClusterOrderEntry;
diff --git a/src/de/lmu/ifi/dbs/elki/visualization/opticsplot/OPTICSCut.java b/src/de/lmu/ifi/dbs/elki/visualization/opticsplot/OPTICSCut.java
index c4297fca..41563087 100644
--- a/src/de/lmu/ifi/dbs/elki/visualization/opticsplot/OPTICSCut.java
+++ b/src/de/lmu/ifi/dbs/elki/visualization/opticsplot/OPTICSCut.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.visualization.opticsplot;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.List;
diff --git a/src/de/lmu/ifi/dbs/elki/visualization/opticsplot/OPTICSDistanceAdapter.java b/src/de/lmu/ifi/dbs/elki/visualization/opticsplot/OPTICSDistanceAdapter.java
index 3256050d..3f36209a 100644
--- a/src/de/lmu/ifi/dbs/elki/visualization/opticsplot/OPTICSDistanceAdapter.java
+++ b/src/de/lmu/ifi/dbs/elki/visualization/opticsplot/OPTICSDistanceAdapter.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.visualization.opticsplot;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.distance.distancevalue.Distance;
import de.lmu.ifi.dbs.elki.result.optics.ClusterOrderEntry;
diff --git a/src/de/lmu/ifi/dbs/elki/visualization/opticsplot/OPTICSNumberDistance.java b/src/de/lmu/ifi/dbs/elki/visualization/opticsplot/OPTICSNumberDistance.java
index 06d96ae0..f0b49585 100644
--- a/src/de/lmu/ifi/dbs/elki/visualization/opticsplot/OPTICSNumberDistance.java
+++ b/src/de/lmu/ifi/dbs/elki/visualization/opticsplot/OPTICSNumberDistance.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.visualization.opticsplot;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.distance.distancevalue.NumberDistance;
import de.lmu.ifi.dbs.elki.result.optics.ClusterOrderEntry;
diff --git a/src/de/lmu/ifi/dbs/elki/visualization/opticsplot/OPTICSPlot.java b/src/de/lmu/ifi/dbs/elki/visualization/opticsplot/OPTICSPlot.java
index d01c09ec..7520d2a7 100644
--- a/src/de/lmu/ifi/dbs/elki/visualization/opticsplot/OPTICSPlot.java
+++ b/src/de/lmu/ifi/dbs/elki/visualization/opticsplot/OPTICSPlot.java
@@ -1,32 +1,32 @@
package de.lmu.ifi.dbs.elki.visualization.opticsplot;
-/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.awt.image.BufferedImage;
import java.awt.image.RenderedImage;
import java.io.File;
import java.io.IOException;
-import java.util.ArrayList;
import java.util.List;
import javax.imageio.ImageIO;
@@ -38,13 +38,12 @@ import de.lmu.ifi.dbs.elki.distance.distancevalue.NumberDistance;
import de.lmu.ifi.dbs.elki.logging.Logging;
import de.lmu.ifi.dbs.elki.math.DoubleMinMax;
import de.lmu.ifi.dbs.elki.result.Result;
-import de.lmu.ifi.dbs.elki.result.ResultUtil;
import de.lmu.ifi.dbs.elki.result.optics.ClusterOrderEntry;
import de.lmu.ifi.dbs.elki.result.optics.ClusterOrderResult;
+import de.lmu.ifi.dbs.elki.visualization.VisualizerContext;
import de.lmu.ifi.dbs.elki.visualization.colors.ColorLibrary;
import de.lmu.ifi.dbs.elki.visualization.scales.LinearScale;
import de.lmu.ifi.dbs.elki.visualization.style.StyleLibrary;
-import de.lmu.ifi.dbs.elki.visualization.visualizers.VisualizerContext;
/**
* Class to produce an OPTICS plot image.
@@ -349,10 +348,10 @@ public class OPTICSPlot<D extends Distance<D>> implements Result {
*/
public static <D extends Distance<D>> OPTICSPlot<D> plotForClusterOrder(ClusterOrderResult<D> co, VisualizerContext context) {
// Check for an existing plot
- ArrayList<OPTICSPlot<D>> plots = ResultUtil.filterResults(co, OPTICSPlot.class);
- if (plots.size() > 0) {
- return plots.get(0);
- }
+ // ArrayList<OPTICSPlot<D>> plots = ResultUtil.filterResults(co, OPTICSPlot.class);
+ // if (plots.size() > 0) {
+ // return plots.get(0);
+ // }
// Supported by this class?
if (!OPTICSPlot.canPlot(co)) {
return null;
@@ -362,7 +361,7 @@ public class OPTICSPlot<D extends Distance<D>> implements Result {
final OPTICSColorAdapter opcolor = new OPTICSColorFromClustering(colors, refc);
OPTICSPlot<D> opticsplot = new OPTICSPlot<D>(co, opcolor);
- co.addChildResult(opticsplot);
+ // co.addChildResult(opticsplot);
return opticsplot;
}
diff --git a/src/de/lmu/ifi/dbs/elki/visualization/projections/AbstractProjection.java b/src/de/lmu/ifi/dbs/elki/visualization/projections/AbstractProjection.java
index 196b7bca..fcd7191c 100644
--- a/src/de/lmu/ifi/dbs/elki/visualization/projections/AbstractProjection.java
+++ b/src/de/lmu/ifi/dbs/elki/visualization/projections/AbstractProjection.java
@@ -1,29 +1,31 @@
package de.lmu.ifi.dbs.elki.visualization.projections;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.data.NumberVector;
import de.lmu.ifi.dbs.elki.math.linearalgebra.Vector;
+import de.lmu.ifi.dbs.elki.result.AbstractHierarchicalResult;
import de.lmu.ifi.dbs.elki.visualization.scales.LinearScale;
/**
@@ -31,7 +33,7 @@ import de.lmu.ifi.dbs.elki.visualization.scales.LinearScale;
*
* @author Erich Schubert
*/
-public abstract class AbstractProjection implements Projection {
+public abstract class AbstractProjection extends AbstractHierarchicalResult implements Projection {
/**
* Scales in data set
*/
@@ -46,6 +48,11 @@ public abstract class AbstractProjection implements Projection {
super();
this.scales = scales;
}
+
+ @Override
+ public int getInputDimensionality() {
+ return scales.length;
+ }
/**
* Get the scales used, for rendering scales mostly.
@@ -249,4 +256,14 @@ public abstract class AbstractProjection implements Projection {
}
return prototype.newInstance(vec);
}
+
+ @Override
+ public String getLongName() {
+ return "Projection";
+ }
+
+ @Override
+ public String getShortName() {
+ return "projection";
+ }
} \ No newline at end of file
diff --git a/src/de/lmu/ifi/dbs/elki/visualization/projections/AbstractSimpleProjection.java b/src/de/lmu/ifi/dbs/elki/visualization/projections/AbstractSimpleProjection.java
index c6fdfc62..778e0bbb 100644
--- a/src/de/lmu/ifi/dbs/elki/visualization/projections/AbstractSimpleProjection.java
+++ b/src/de/lmu/ifi/dbs/elki/visualization/projections/AbstractSimpleProjection.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.visualization.projections;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.math.linearalgebra.Vector;
import de.lmu.ifi.dbs.elki.visualization.scales.LinearScale;
diff --git a/src/de/lmu/ifi/dbs/elki/visualization/projections/AffineProjection.java b/src/de/lmu/ifi/dbs/elki/visualization/projections/AffineProjection.java
index 4e6254e8..a139cdc1 100644
--- a/src/de/lmu/ifi/dbs/elki/visualization/projections/AffineProjection.java
+++ b/src/de/lmu/ifi/dbs/elki/visualization/projections/AffineProjection.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.visualization.projections;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.BitSet;
diff --git a/src/de/lmu/ifi/dbs/elki/visualization/projections/Projection.java b/src/de/lmu/ifi/dbs/elki/visualization/projections/Projection.java
index 6f8f9b4f..fcd6089d 100644
--- a/src/de/lmu/ifi/dbs/elki/visualization/projections/Projection.java
+++ b/src/de/lmu/ifi/dbs/elki/visualization/projections/Projection.java
@@ -1,29 +1,31 @@
package de.lmu.ifi.dbs.elki.visualization.projections;
-/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.data.NumberVector;
import de.lmu.ifi.dbs.elki.math.linearalgebra.Vector;
+import de.lmu.ifi.dbs.elki.result.HierarchicalResult;
import de.lmu.ifi.dbs.elki.visualization.scales.LinearScale;
import de.lmu.ifi.dbs.elki.visualization.style.StyleLibrary;
@@ -41,12 +43,19 @@ import de.lmu.ifi.dbs.elki.visualization.style.StyleLibrary;
* @apiviz.uses NumberVector
* @apiviz.uses Vector
*/
-public interface Projection {
+public interface Projection extends HierarchicalResult {
/**
* Scaling constant. Keep in sync with
* {@link de.lmu.ifi.dbs.elki.visualization.style.StyleLibrary#SCALE}.
*/
public static final double SCALE = StyleLibrary.SCALE;
+
+ /**
+ * Get the input dimensionality of the projection.
+ *
+ * @return Input dimensionality
+ */
+ public int getInputDimensionality();
/**
* Get the scale class for a particular dimension.
diff --git a/src/de/lmu/ifi/dbs/elki/visualization/projections/Projection1D.java b/src/de/lmu/ifi/dbs/elki/visualization/projections/Projection1D.java
index 7e60d3c7..746b3b68 100644
--- a/src/de/lmu/ifi/dbs/elki/visualization/projections/Projection1D.java
+++ b/src/de/lmu/ifi/dbs/elki/visualization/projections/Projection1D.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.visualization.projections;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.data.NumberVector;
import de.lmu.ifi.dbs.elki.math.linearalgebra.Vector;
diff --git a/src/de/lmu/ifi/dbs/elki/visualization/projections/Projection2D.java b/src/de/lmu/ifi/dbs/elki/visualization/projections/Projection2D.java
index 7f6fe244..9fcb0b15 100644
--- a/src/de/lmu/ifi/dbs/elki/visualization/projections/Projection2D.java
+++ b/src/de/lmu/ifi/dbs/elki/visualization/projections/Projection2D.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.visualization.projections;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.BitSet;
diff --git a/src/de/lmu/ifi/dbs/elki/visualization/projections/Simple1D.java b/src/de/lmu/ifi/dbs/elki/visualization/projections/Simple1D.java
index d89ae5ad..e208b34b 100644
--- a/src/de/lmu/ifi/dbs/elki/visualization/projections/Simple1D.java
+++ b/src/de/lmu/ifi/dbs/elki/visualization/projections/Simple1D.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.visualization.projections;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.data.NumberVector;
import de.lmu.ifi.dbs.elki.math.linearalgebra.Vector;
diff --git a/src/de/lmu/ifi/dbs/elki/visualization/projections/Simple2D.java b/src/de/lmu/ifi/dbs/elki/visualization/projections/Simple2D.java
index 8661c594..15108853 100644
--- a/src/de/lmu/ifi/dbs/elki/visualization/projections/Simple2D.java
+++ b/src/de/lmu/ifi/dbs/elki/visualization/projections/Simple2D.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.visualization.projections;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.BitSet;
diff --git a/src/de/lmu/ifi/dbs/elki/visualization/projector/HistogramFactory.java b/src/de/lmu/ifi/dbs/elki/visualization/projector/HistogramFactory.java
new file mode 100644
index 00000000..06e94891
--- /dev/null
+++ b/src/de/lmu/ifi/dbs/elki/visualization/projector/HistogramFactory.java
@@ -0,0 +1,103 @@
+package de.lmu.ifi.dbs.elki.visualization.projector;
+
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
+
+import de.lmu.ifi.dbs.elki.data.NumberVector;
+import de.lmu.ifi.dbs.elki.data.type.TypeUtil;
+import de.lmu.ifi.dbs.elki.database.Database;
+import de.lmu.ifi.dbs.elki.database.relation.Relation;
+import de.lmu.ifi.dbs.elki.result.HierarchicalResult;
+import de.lmu.ifi.dbs.elki.result.Result;
+import de.lmu.ifi.dbs.elki.result.ResultUtil;
+import de.lmu.ifi.dbs.elki.utilities.DatabaseUtil;
+import de.lmu.ifi.dbs.elki.utilities.optionhandling.AbstractParameterizer;
+import de.lmu.ifi.dbs.elki.utilities.optionhandling.constraints.GreaterEqualConstraint;
+import de.lmu.ifi.dbs.elki.utilities.optionhandling.parameterization.Parameterization;
+import de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters.IntParameter;
+
+/**
+ * Produce one-dimensional projections.
+ *
+ * @author Erich Schubert
+ */
+// TODO: re-add maxdim option
+public class HistogramFactory implements ProjectorFactory {
+ /**
+ * Maximum dimensionality
+ */
+ private int maxdim = ScatterPlotFactory.MAX_DIMENSIONS_DEFAULT;
+
+ /**
+ * Constructor.
+ * @param maxdim Maximum dimensionality
+ */
+ public HistogramFactory(int maxdim) {
+ super();
+ this.maxdim = maxdim;
+ }
+
+ @Override
+ public void processNewResult(HierarchicalResult baseResult, Result newResult) {
+ Database db = ResultUtil.findDatabase(newResult);
+ if(db != null) {
+ for(Relation<?> rel : db.getRelations()) {
+ if(TypeUtil.NUMBER_VECTOR_FIELD.isAssignableFromType(rel.getDataTypeInformation())) {
+ @SuppressWarnings("unchecked")
+ Relation<NumberVector<?, ?>> vrel = (Relation<NumberVector<?, ?>>) rel;
+ final int dim = DatabaseUtil.dimensionality(vrel);
+ HistogramProjector<NumberVector<?, ?>> proj = new HistogramProjector<NumberVector<?, ?>>(vrel, Math.min(dim, maxdim));
+ baseResult.getHierarchy().add(vrel, proj);
+ }
+ }
+ }
+ }
+
+ /**
+ * Parameterization class.
+ *
+ * @author Erich Schubert
+ *
+ * @apiviz.exclude
+ */
+ public static class Parameterizer extends AbstractParameterizer {
+ /**
+ * Stores the maximum number of dimensions to show.
+ */
+ private int maxdim = ScatterPlotFactory.MAX_DIMENSIONS_DEFAULT;
+
+ @Override
+ protected void makeOptions(Parameterization config) {
+ super.makeOptions(config);
+ IntParameter maxdimP = new IntParameter(ScatterPlotFactory.Parameterizer.MAXDIM_ID, new GreaterEqualConstraint(1), ScatterPlotFactory.MAX_DIMENSIONS_DEFAULT);
+ if(config.grab(maxdimP)) {
+ maxdim = maxdimP.getValue();
+ }
+ }
+
+ @Override
+ protected HistogramFactory makeInstance() {
+ return new HistogramFactory(maxdim);
+ }
+ }
+} \ No newline at end of file
diff --git a/src/de/lmu/ifi/dbs/elki/visualization/projector/HistogramProjector.java b/src/de/lmu/ifi/dbs/elki/visualization/projector/HistogramProjector.java
new file mode 100644
index 00000000..5ddc7b32
--- /dev/null
+++ b/src/de/lmu/ifi/dbs/elki/visualization/projector/HistogramProjector.java
@@ -0,0 +1,125 @@
+package de.lmu.ifi.dbs.elki.visualization.projector;
+
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
+
+import java.util.ArrayList;
+import java.util.Collection;
+import java.util.List;
+
+import de.lmu.ifi.dbs.elki.data.NumberVector;
+import de.lmu.ifi.dbs.elki.database.relation.Relation;
+import de.lmu.ifi.dbs.elki.result.AbstractHierarchicalResult;
+import de.lmu.ifi.dbs.elki.result.ResultUtil;
+import de.lmu.ifi.dbs.elki.utilities.DatabaseUtil;
+import de.lmu.ifi.dbs.elki.visualization.VisualizationTask;
+import de.lmu.ifi.dbs.elki.visualization.gui.overview.PlotItem;
+import de.lmu.ifi.dbs.elki.visualization.projections.Projection1D;
+import de.lmu.ifi.dbs.elki.visualization.projections.Simple1D;
+import de.lmu.ifi.dbs.elki.visualization.scales.LinearScale;
+import de.lmu.ifi.dbs.elki.visualization.scales.Scales;
+import de.lmu.ifi.dbs.elki.visualization.visualizers.visunproj.LabelVisFactory;
+
+/**
+ * ScatterPlotProjector is responsible for producing a set of scatterplot
+ * visualizations.
+ *
+ * @author Erich Schubert
+ *
+ * @param <V> Vector type
+ */
+public class HistogramProjector<V extends NumberVector<?, ?>> extends AbstractHierarchicalResult implements Projector {
+ /**
+ * Relation we project
+ */
+ Relation<V> rel;
+
+ /**
+ * Database dimensionality
+ */
+ int dmax;
+
+ /**
+ * Axis scales
+ */
+ LinearScale[] scales;
+
+ /**
+ * Constructor.
+ *
+ * @param rel Relation
+ * @param maxdim Maximum dimension to use
+ */
+ public HistogramProjector(Relation<V> rel, int maxdim) {
+ super();
+ this.rel = rel;
+ this.dmax = maxdim;
+ this.scales = Scales.calcScales(rel);
+ assert (maxdim <= DatabaseUtil.dimensionality(rel)) : "Requested dimensionality larger than data dimensionality?!?";
+ }
+
+ @Override
+ public Collection<PlotItem> arrange() {
+ List<PlotItem> layout = new ArrayList<PlotItem>(1);
+ List<VisualizationTask> tasks = ResultUtil.filterResults(this, VisualizationTask.class);
+ if (tasks.size() > 0){
+ PlotItem master = new PlotItem(dmax + .1, .5 + .1, null);
+ for(int d1 = 1; d1 <= dmax; d1++) {
+ Projection1D proj = new Simple1D(scales, d1);
+ final PlotItem it = new PlotItem(d1 - 1 + .1, 0. + .1, 1., .5, proj);
+ it.visualizations = tasks;
+ master.subitems.add(it);
+ }
+ layout.add(master);
+ for(int d1 = 1; d1 <= dmax; d1++) {
+ PlotItem it = new PlotItem(d1 - 1 + .1, 0, 1., .1, null);
+ final VisualizationTask task = new VisualizationTask("", null, null, new LabelVisFactory(DatabaseUtil.getColumnLabel(rel, d1)));
+ task.height = .1;
+ task.width = 1;
+ task.put(VisualizationTask.META_NODETAIL, true);
+ it.visualizations.add(task);
+ master.subitems.add(it);
+ }
+ }
+ return layout;
+ }
+
+ @Override
+ public String getLongName() {
+ return "Axis plot";
+ }
+
+ @Override
+ public String getShortName() {
+ return "axisplot";
+ }
+
+ /**
+ * Get the relation we project.
+ *
+ * @return Relation
+ */
+ public Relation<V> getRelation() {
+ return rel;
+ }
+} \ No newline at end of file
diff --git a/src/de/lmu/ifi/dbs/elki/visualization/projector/OPTICSProjector.java b/src/de/lmu/ifi/dbs/elki/visualization/projector/OPTICSProjector.java
new file mode 100644
index 00000000..21b9c227
--- /dev/null
+++ b/src/de/lmu/ifi/dbs/elki/visualization/projector/OPTICSProjector.java
@@ -0,0 +1,108 @@
+package de.lmu.ifi.dbs.elki.visualization.projector;
+
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
+
+import java.util.ArrayList;
+import java.util.Collection;
+import java.util.List;
+
+import de.lmu.ifi.dbs.elki.distance.distancevalue.Distance;
+import de.lmu.ifi.dbs.elki.result.AbstractHierarchicalResult;
+import de.lmu.ifi.dbs.elki.result.ResultUtil;
+import de.lmu.ifi.dbs.elki.result.optics.ClusterOrderResult;
+import de.lmu.ifi.dbs.elki.visualization.VisualizationTask;
+import de.lmu.ifi.dbs.elki.visualization.VisualizerContext;
+import de.lmu.ifi.dbs.elki.visualization.gui.overview.PlotItem;
+import de.lmu.ifi.dbs.elki.visualization.opticsplot.OPTICSPlot;
+
+/**
+ * Projection for OPTICS plots.
+ *
+ * @author Erich Schubert
+ */
+public class OPTICSProjector<D extends Distance<D>> extends AbstractHierarchicalResult implements Projector {
+ /**
+ * Cluster order result
+ */
+ private ClusterOrderResult<D> clusterOrder;
+
+ /**
+ * OPTICS plot image
+ */
+ private OPTICSPlot<D> plot = null;
+
+ /**
+ * Constructor.
+ *
+ * @param co Cluster order
+ */
+ public OPTICSProjector(ClusterOrderResult<D> co) {
+ super();
+ this.clusterOrder = co;
+ }
+
+ @Override
+ public String getLongName() {
+ return "OPTICS projection";
+ }
+
+ @Override
+ public String getShortName() {
+ return "optics";
+ }
+
+ @Override
+ public Collection<PlotItem> arrange() {
+ List<PlotItem> col = new ArrayList<PlotItem>(1);
+ List<VisualizationTask> tasks = ResultUtil.filterResults(this, VisualizationTask.class);
+ if (tasks.size() > 0) {
+ final PlotItem it = new PlotItem(4., 1., null);
+ it.visualizations = tasks;
+ col.add(it);
+ }
+ return col;
+ }
+
+ /**
+ * Get the cluster order
+ *
+ * @return the cluster order
+ */
+ public ClusterOrderResult<D> getResult() {
+ return clusterOrder;
+ }
+
+ /**
+ * Get or produce the actual OPTICS plot.
+ *
+ * @param context Context to use
+ * @return Plot
+ */
+ public OPTICSPlot<D> getOPTICSPlot(VisualizerContext context) {
+ if(plot == null) {
+ plot = OPTICSPlot.plotForClusterOrder(clusterOrder, context);
+ }
+ return plot;
+ }
+} \ No newline at end of file
diff --git a/src/de/lmu/ifi/dbs/elki/visualization/projector/OPTICSProjectorFactory.java b/src/de/lmu/ifi/dbs/elki/visualization/projector/OPTICSProjectorFactory.java
new file mode 100644
index 00000000..580eb532
--- /dev/null
+++ b/src/de/lmu/ifi/dbs/elki/visualization/projector/OPTICSProjectorFactory.java
@@ -0,0 +1,59 @@
+package de.lmu.ifi.dbs.elki.visualization.projector;
+
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
+
+import java.util.Collection;
+
+import de.lmu.ifi.dbs.elki.distance.distancevalue.DoubleDistance;
+import de.lmu.ifi.dbs.elki.result.HierarchicalResult;
+import de.lmu.ifi.dbs.elki.result.Result;
+import de.lmu.ifi.dbs.elki.result.ResultUtil;
+import de.lmu.ifi.dbs.elki.result.optics.ClusterOrderResult;
+import de.lmu.ifi.dbs.elki.visualization.opticsplot.OPTICSPlot;
+
+/**
+ * Produce OPTICS plot projections
+ *
+ * @author Erich Schubert
+ */
+public class OPTICSProjectorFactory implements ProjectorFactory {
+ /**
+ * Constructor.
+ */
+ public OPTICSProjectorFactory() {
+ super();
+ }
+
+ @Override
+ public void processNewResult(HierarchicalResult baseResult, Result newResult) {
+ Collection<ClusterOrderResult<?>> cos = ResultUtil.filterResults(newResult, ClusterOrderResult.class);
+ for(ClusterOrderResult<?> co : cos) {
+ if(OPTICSPlot.canPlot(co)) {
+ @SuppressWarnings("unchecked")
+ OPTICSProjector<?> proj = new OPTICSProjector<DoubleDistance>((ClusterOrderResult<DoubleDistance>) co);
+ baseResult.getHierarchy().add(co, proj);
+ }
+ }
+ }
+}
diff --git a/src/de/lmu/ifi/dbs/elki/visualization/projector/Projector.java b/src/de/lmu/ifi/dbs/elki/visualization/projector/Projector.java
new file mode 100644
index 00000000..646adda5
--- /dev/null
+++ b/src/de/lmu/ifi/dbs/elki/visualization/projector/Projector.java
@@ -0,0 +1,43 @@
+package de.lmu.ifi.dbs.elki.visualization.projector;
+
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
+
+import java.util.Collection;
+
+import de.lmu.ifi.dbs.elki.result.HierarchicalResult;
+import de.lmu.ifi.dbs.elki.visualization.gui.overview.PlotItem;
+
+/**
+ * A projector is responsible for adding projections to the visualization.
+ *
+ * @author Erich Schubert
+ */
+public interface Projector extends HierarchicalResult {
+ /**
+ * Produce an arrangement of projections.
+ *
+ * @return Arrangement.
+ */
+ public Collection<PlotItem> arrange();
+} \ No newline at end of file
diff --git a/src/de/lmu/ifi/dbs/elki/visualization/projector/ProjectorFactory.java b/src/de/lmu/ifi/dbs/elki/visualization/projector/ProjectorFactory.java
new file mode 100644
index 00000000..d0996822
--- /dev/null
+++ b/src/de/lmu/ifi/dbs/elki/visualization/projector/ProjectorFactory.java
@@ -0,0 +1,46 @@
+package de.lmu.ifi.dbs.elki.visualization.projector;
+
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
+
+import de.lmu.ifi.dbs.elki.result.HierarchicalResult;
+import de.lmu.ifi.dbs.elki.result.Result;
+import de.lmu.ifi.dbs.elki.result.ResultProcessor;
+import de.lmu.ifi.dbs.elki.utilities.optionhandling.Parameterizable;
+
+/**
+ * A projector is responsible for adding projections to the visualization by
+ * detecting appropriate relations in the database.
+ *
+ * @author Erich Schubert
+ */
+public interface ProjectorFactory extends ResultProcessor, Parameterizable {
+ /**
+ * Add projections for the given result (tree) to the result tree.
+ *
+ * @param baseResult Context to work with
+ * @param newResult Result to process
+ */
+ @Override
+ public void processNewResult(HierarchicalResult baseResult, Result newResult);
+} \ No newline at end of file
diff --git a/src/de/lmu/ifi/dbs/elki/visualization/projector/ScatterPlotFactory.java b/src/de/lmu/ifi/dbs/elki/visualization/projector/ScatterPlotFactory.java
new file mode 100644
index 00000000..3d996bdc
--- /dev/null
+++ b/src/de/lmu/ifi/dbs/elki/visualization/projector/ScatterPlotFactory.java
@@ -0,0 +1,121 @@
+package de.lmu.ifi.dbs.elki.visualization.projector;
+
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
+
+import de.lmu.ifi.dbs.elki.data.NumberVector;
+import de.lmu.ifi.dbs.elki.data.type.TypeUtil;
+import de.lmu.ifi.dbs.elki.database.Database;
+import de.lmu.ifi.dbs.elki.database.relation.Relation;
+import de.lmu.ifi.dbs.elki.result.HierarchicalResult;
+import de.lmu.ifi.dbs.elki.result.Result;
+import de.lmu.ifi.dbs.elki.result.ResultUtil;
+import de.lmu.ifi.dbs.elki.utilities.DatabaseUtil;
+import de.lmu.ifi.dbs.elki.utilities.optionhandling.AbstractParameterizer;
+import de.lmu.ifi.dbs.elki.utilities.optionhandling.OptionID;
+import de.lmu.ifi.dbs.elki.utilities.optionhandling.constraints.GreaterEqualConstraint;
+import de.lmu.ifi.dbs.elki.utilities.optionhandling.parameterization.Parameterization;
+import de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters.IntParameter;
+
+/**
+ * Produce scatterplot projections.
+ *
+ * @author Erich Schubert
+ */
+// TODO: re-add maxdim option
+public class ScatterPlotFactory implements ProjectorFactory {
+ /**
+ * Maximum number of dimensions to visualize.
+ *
+ * TODO: Erich: add scrolling function for higher dimensionality!
+ */
+ public static final int MAX_DIMENSIONS_DEFAULT = 10;
+
+ /**
+ * Stores the maximum number of dimensions to show.
+ */
+ private int maxdim = MAX_DIMENSIONS_DEFAULT;
+
+ /**
+ * Constructor.
+ *
+ * @param maxdim Maximum number of dimensions to show.
+ */
+ public ScatterPlotFactory(int maxdim) {
+ super();
+ this.maxdim = maxdim;
+ }
+
+ @Override
+ public void processNewResult(HierarchicalResult baseResult, Result newResult) {
+ Database db = ResultUtil.findDatabase(newResult);
+ if(db != null) {
+ for(Relation<?> rel : db.getRelations()) {
+ if(TypeUtil.NUMBER_VECTOR_FIELD.isAssignableFromType(rel.getDataTypeInformation())) {
+ @SuppressWarnings("unchecked")
+ Relation<NumberVector<?, ?>> vrel = (Relation<NumberVector<?, ?>>) rel;
+ final int dim = DatabaseUtil.dimensionality(vrel);
+ ScatterPlotProjector<NumberVector<?, ?>> proj = new ScatterPlotProjector<NumberVector<?, ?>>(vrel, Math.min(maxdim, dim));
+ baseResult.getHierarchy().add(vrel, proj);
+ }
+ }
+ }
+ }
+
+ /**
+ * Parameterization class.
+ *
+ * @author Erich Schubert
+ *
+ * @apiviz.exclude
+ */
+ public static class Parameterizer extends AbstractParameterizer {
+ /**
+ * Parameter for the maximum number of dimensions,
+ *
+ * <p>
+ * Code: -vis.maxdim
+ * </p>
+ */
+ public static final OptionID MAXDIM_ID = OptionID.getOrCreateOptionID("vis.maxdim", "Maximum number of dimensions to display.");
+
+ /**
+ * Stores the maximum number of dimensions to show.
+ */
+ private int maxdim = MAX_DIMENSIONS_DEFAULT;
+
+ @Override
+ protected void makeOptions(Parameterization config) {
+ super.makeOptions(config);
+ IntParameter maxdimP = new IntParameter(MAXDIM_ID, new GreaterEqualConstraint(1), MAX_DIMENSIONS_DEFAULT);
+ if(config.grab(maxdimP)) {
+ maxdim = maxdimP.getValue();
+ }
+ }
+
+ @Override
+ protected Object makeInstance() {
+ return new ScatterPlotFactory(maxdim);
+ }
+ }
+} \ No newline at end of file
diff --git a/src/de/lmu/ifi/dbs/elki/visualization/projector/ScatterPlotProjector.java b/src/de/lmu/ifi/dbs/elki/visualization/projector/ScatterPlotProjector.java
new file mode 100644
index 00000000..ee692531
--- /dev/null
+++ b/src/de/lmu/ifi/dbs/elki/visualization/projector/ScatterPlotProjector.java
@@ -0,0 +1,189 @@
+package de.lmu.ifi.dbs.elki.visualization.projector;
+
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
+
+import java.util.ArrayList;
+import java.util.Collection;
+import java.util.List;
+
+import de.lmu.ifi.dbs.elki.data.NumberVector;
+import de.lmu.ifi.dbs.elki.database.relation.Relation;
+import de.lmu.ifi.dbs.elki.math.linearalgebra.AffineTransformation;
+import de.lmu.ifi.dbs.elki.result.AbstractHierarchicalResult;
+import de.lmu.ifi.dbs.elki.result.ResultUtil;
+import de.lmu.ifi.dbs.elki.utilities.DatabaseUtil;
+import de.lmu.ifi.dbs.elki.visualization.VisualizationTask;
+import de.lmu.ifi.dbs.elki.visualization.gui.overview.PlotItem;
+import de.lmu.ifi.dbs.elki.visualization.projections.AffineProjection;
+import de.lmu.ifi.dbs.elki.visualization.projections.Projection2D;
+import de.lmu.ifi.dbs.elki.visualization.projections.Simple2D;
+import de.lmu.ifi.dbs.elki.visualization.scales.LinearScale;
+import de.lmu.ifi.dbs.elki.visualization.scales.Scales;
+import de.lmu.ifi.dbs.elki.visualization.visualizers.visunproj.LabelVisFactory;
+
+/**
+ * ScatterPlotProjector is responsible for producing a set of scatterplot
+ * visualizations.
+ *
+ * @author Erich Schubert
+ *
+ * @param <V> Vector type
+ */
+// FIXME: re-add column labels
+public class ScatterPlotProjector<V extends NumberVector<?, ?>> extends AbstractHierarchicalResult implements Projector {
+ /**
+ * Relation we project
+ */
+ Relation<V> rel;
+
+ /**
+ * Database dimensionality
+ */
+ int dmax;
+
+ /**
+ * Axis scales
+ */
+ LinearScale[] scales;
+
+ /**
+ * Constructor.
+ *
+ * @param rel Relation
+ * @param maxdim Maximum dimension to use
+ */
+ public ScatterPlotProjector(Relation<V> rel, int maxdim) {
+ super();
+ this.rel = rel;
+ this.dmax = maxdim;
+ this.scales = Scales.calcScales(rel);
+ assert (maxdim <= DatabaseUtil.dimensionality(rel)) : "Requested dimensionality larger than data dimensionality?!?";
+ }
+
+ @Override
+ public Collection<PlotItem> arrange() {
+ List<PlotItem> layout = new ArrayList<PlotItem>(1);
+ List<VisualizationTask> tasks = ResultUtil.filterResults(this, VisualizationTask.class);
+ if(tasks.size() > 0) {
+ final PlotItem master;
+ if(dmax == 2) {
+ // In 2d, make the plot twice as big.
+ master = new PlotItem(2 + .1, 2 + .1, null);
+ {
+ Projection2D proj = new Simple2D(scales, 1, 2);
+ PlotItem it = new PlotItem(.1, 0, 2., 2., proj);
+ it.visualizations = tasks;
+ master.subitems.add(it);
+ }
+ // Label at bottom
+ {
+ PlotItem it = new PlotItem(.1, 2., 2., .1, null);
+ final VisualizationTask task = new VisualizationTask("", null, null, new LabelVisFactory(DatabaseUtil.getColumnLabel(rel, 1)));
+ task.height = .1;
+ task.width = 2.;
+ task.put(VisualizationTask.META_NODETAIL, true);
+ it.visualizations.add(task);
+ master.subitems.add(it);
+ }
+ // Label on left
+ {
+ PlotItem it = new PlotItem(0, 0, .1, 2, null);
+ final VisualizationTask task = new VisualizationTask("", null, null, new LabelVisFactory(DatabaseUtil.getColumnLabel(rel, 2), true));
+ task.height = 2.;
+ task.width = .1;
+ task.put(VisualizationTask.META_NODETAIL, true);
+ it.visualizations.add(task);
+ master.subitems.add(it);
+ }
+ }
+ else {
+ final double sizeh = Math.ceil((dmax - 1) / 2.0);
+ master = new PlotItem(sizeh * 2 + .1, dmax - 1 + .1, null);
+
+ for(int d1 = 1; d1 < dmax; d1++) {
+ for(int d2 = d1 + 1; d2 <= dmax; d2++) {
+ Projection2D proj = new Simple2D(scales, d1, d2);
+ PlotItem it = new PlotItem(d1 - 1 + .1, d2 - 2, 1., 1., proj);
+ it.visualizations = tasks;
+ master.subitems.add(it);
+ }
+ }
+ if(dmax >= 3) {
+ AffineTransformation p = AffineProjection.axisProjection(DatabaseUtil.dimensionality(rel), 1, 2);
+ p.addRotation(0, 2, Math.PI / 180 * -10.);
+ p.addRotation(1, 2, Math.PI / 180 * 15.);
+ // Wanna try 4d? go ahead:
+ // p.addRotation(0, 3, Math.PI / 180 * -20.);
+ // p.addRotation(1, 3, Math.PI / 180 * 30.);
+ Projection2D proj = new AffineProjection(scales, p);
+ PlotItem it = new PlotItem(sizeh + .1, 0, sizeh, sizeh, proj);
+ it.visualizations = tasks;
+ master.subitems.add(it);
+ }
+ // Labels at bottom
+ for(int d1 = 1; d1 < dmax; d1++) {
+ PlotItem it = new PlotItem(d1 - 1 + .1, dmax - 1, 1., .1, null);
+ final VisualizationTask task = new VisualizationTask("", null, null, new LabelVisFactory(DatabaseUtil.getColumnLabel(rel, d1)));
+ task.height = .1;
+ task.width = 1;
+ task.put(VisualizationTask.META_NODETAIL, true);
+ it.visualizations.add(task);
+ master.subitems.add(it);
+ }
+ // Labels on left
+ for(int d2 = 2; d2 <= dmax; d2++) {
+ PlotItem it = new PlotItem(0, d2 - 2, .1, 1, null);
+ final VisualizationTask task = new VisualizationTask("", null, null, new LabelVisFactory(DatabaseUtil.getColumnLabel(rel, d2), true));
+ task.height = 1;
+ task.width = .1;
+ task.put(VisualizationTask.META_NODETAIL, true);
+ it.visualizations.add(task);
+ master.subitems.add(it);
+ }
+ }
+
+ layout.add(master);
+ }
+ return layout;
+ }
+
+ @Override
+ public String getLongName() {
+ return "Scatterplot";
+ }
+
+ @Override
+ public String getShortName() {
+ return "scatterplot";
+ }
+
+ /**
+ * The relation we project.
+ *
+ * @return Relation
+ */
+ public Relation<V> getRelation() {
+ return rel;
+ }
+} \ No newline at end of file
diff --git a/src/de/lmu/ifi/dbs/elki/visualization/projector/package-info.java b/src/de/lmu/ifi/dbs/elki/visualization/projector/package-info.java
new file mode 100644
index 00000000..5975089c
--- /dev/null
+++ b/src/de/lmu/ifi/dbs/elki/visualization/projector/package-info.java
@@ -0,0 +1,26 @@
+/**
+ * <p>Projectors are responsible for finding appropriate projections for data relations.</p>
+ */
+/*
+This file is part of ELKI:
+Environment for Developing KDD-Applications Supported by Index-Structures
+
+Copyright (C) 2011
+Ludwig-Maximilians-Universität München
+Lehr- und Forschungseinheit für Datenbanksysteme
+ELKI Development Team
+
+This program is free software: you can redistribute it and/or modify
+it under the terms of the GNU Affero General Public License as published by
+the Free Software Foundation, either version 3 of the License, or
+(at your option) any later version.
+
+This program is distributed in the hope that it will be useful,
+but WITHOUT ANY WARRANTY; without even the implied warranty of
+MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+GNU Affero General Public License for more details.
+
+You should have received a copy of the GNU Affero General Public License
+along with this program. If not, see <http://www.gnu.org/licenses/>.
+*/
+package de.lmu.ifi.dbs.elki.visualization.projector; \ No newline at end of file
diff --git a/src/de/lmu/ifi/dbs/elki/visualization/savedialog/SVGSaveDialog.java b/src/de/lmu/ifi/dbs/elki/visualization/savedialog/SVGSaveDialog.java
index 1dad0c83..0fbf584e 100644
--- a/src/de/lmu/ifi/dbs/elki/visualization/savedialog/SVGSaveDialog.java
+++ b/src/de/lmu/ifi/dbs/elki/visualization/savedialog/SVGSaveDialog.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.visualization.savedialog;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.awt.Component;
import java.io.File;
diff --git a/src/de/lmu/ifi/dbs/elki/visualization/savedialog/SaveOptionsPanel.java b/src/de/lmu/ifi/dbs/elki/visualization/savedialog/SaveOptionsPanel.java
index f7d1d5f8..9a678218 100644
--- a/src/de/lmu/ifi/dbs/elki/visualization/savedialog/SaveOptionsPanel.java
+++ b/src/de/lmu/ifi/dbs/elki/visualization/savedialog/SaveOptionsPanel.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.visualization.savedialog;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.awt.event.ActionEvent;
import java.awt.event.ActionListener;
diff --git a/src/de/lmu/ifi/dbs/elki/visualization/scales/LinearScale.java b/src/de/lmu/ifi/dbs/elki/visualization/scales/LinearScale.java
index b5654a35..8ae18fb5 100644
--- a/src/de/lmu/ifi/dbs/elki/visualization/scales/LinearScale.java
+++ b/src/de/lmu/ifi/dbs/elki/visualization/scales/LinearScale.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.visualization.scales;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.text.NumberFormat;
import java.util.Locale;
diff --git a/src/de/lmu/ifi/dbs/elki/visualization/scales/Scales.java b/src/de/lmu/ifi/dbs/elki/visualization/scales/Scales.java
index dcaea902..8f73d617 100644
--- a/src/de/lmu/ifi/dbs/elki/visualization/scales/Scales.java
+++ b/src/de/lmu/ifi/dbs/elki/visualization/scales/Scales.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.visualization.scales;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.data.NumberVector;
import de.lmu.ifi.dbs.elki.database.ids.DBID;
diff --git a/src/de/lmu/ifi/dbs/elki/visualization/style/PropertiesBasedStyleLibrary.java b/src/de/lmu/ifi/dbs/elki/visualization/style/PropertiesBasedStyleLibrary.java
index 1889059e..9d60a413 100644
--- a/src/de/lmu/ifi/dbs/elki/visualization/style/PropertiesBasedStyleLibrary.java
+++ b/src/de/lmu/ifi/dbs/elki/visualization/style/PropertiesBasedStyleLibrary.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.visualization.style;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.io.File;
import java.io.FileNotFoundException;
diff --git a/src/de/lmu/ifi/dbs/elki/visualization/style/StyleLibrary.java b/src/de/lmu/ifi/dbs/elki/visualization/style/StyleLibrary.java
index e4076716..5cd721a7 100644
--- a/src/de/lmu/ifi/dbs/elki/visualization/style/StyleLibrary.java
+++ b/src/de/lmu/ifi/dbs/elki/visualization/style/StyleLibrary.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.visualization.style;
-/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.visualization.colors.ColorLibrary;
import de.lmu.ifi.dbs.elki.visualization.style.lines.LineStyleLibrary;
@@ -109,6 +110,11 @@ public interface StyleLibrary {
final static String REFERENCE_POINTS = "plot.referencepoints";
/**
+ * Polygons style
+ */
+ final static String POLYGONS = "plot.polygons";
+
+ /**
* Selection color and opacity
*/
final static String SELECTION = "plot.selection";
diff --git a/src/de/lmu/ifi/dbs/elki/visualization/style/default.properties b/src/de/lmu/ifi/dbs/elki/visualization/style/default.properties
index fc5e751d..2fdb15ed 100644
--- a/src/de/lmu/ifi/dbs/elki/visualization/style/default.properties
+++ b/src/de/lmu/ifi/dbs/elki/visualization/style/default.properties
@@ -11,7 +11,7 @@ text-size=0.02
## Text color
text-color=black
## Default margin (relative)
-margin.size=0.15
+margin.size=0.1
## Named color for the page background
page.background-color=white
@@ -57,6 +57,9 @@ plot.dot.size=0.002
## Reference points
plot.referencepoints.size=0.003
plot.referencepoints.color=red
+## Polygons
+plot.polygons.line-width=0.001
+plot.polygons.color=gray
## Curve vis (ROC curves) labels:
curve.labels.text-size=0.04
diff --git a/src/de/lmu/ifi/dbs/elki/visualization/style/grayscale.properties b/src/de/lmu/ifi/dbs/elki/visualization/style/grayscale.properties
index 35abd93e..dc98d41e 100644
--- a/src/de/lmu/ifi/dbs/elki/visualization/style/grayscale.properties
+++ b/src/de/lmu/ifi/dbs/elki/visualization/style/grayscale.properties
@@ -11,7 +11,7 @@ text-size=0.02
## Text color
text-color=black
## Default margin (relative)
-margin.size=0.15
+margin.size=0.10
## Named color for the page background
page.background-color=white
@@ -57,6 +57,9 @@ plot.dot.size=0.002
## Reference points
plot.referencepoints.size=0.003
plot.referencepoints.color=black
+## Polygons
+plot.polygons.line-width=0.001
+plot.polygons.color=dimgray
## Curve vis (ROC curves) labels:
curve.labels.text-size=0.04
diff --git a/src/de/lmu/ifi/dbs/elki/visualization/style/lines/DashedLineStyleLibrary.java b/src/de/lmu/ifi/dbs/elki/visualization/style/lines/DashedLineStyleLibrary.java
index 1056294b..0a03afce 100644
--- a/src/de/lmu/ifi/dbs/elki/visualization/style/lines/DashedLineStyleLibrary.java
+++ b/src/de/lmu/ifi/dbs/elki/visualization/style/lines/DashedLineStyleLibrary.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.visualization.style.lines;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import org.apache.batik.util.CSSConstants;
diff --git a/src/de/lmu/ifi/dbs/elki/visualization/style/lines/LineStyleLibrary.java b/src/de/lmu/ifi/dbs/elki/visualization/style/lines/LineStyleLibrary.java
index 9472c70f..7576967a 100644
--- a/src/de/lmu/ifi/dbs/elki/visualization/style/lines/LineStyleLibrary.java
+++ b/src/de/lmu/ifi/dbs/elki/visualization/style/lines/LineStyleLibrary.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.visualization.style.lines;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.visualization.css.CSSClass;
diff --git a/src/de/lmu/ifi/dbs/elki/visualization/style/lines/SolidLineStyleLibrary.java b/src/de/lmu/ifi/dbs/elki/visualization/style/lines/SolidLineStyleLibrary.java
index b39ae7c2..2adcaa3e 100644
--- a/src/de/lmu/ifi/dbs/elki/visualization/style/lines/SolidLineStyleLibrary.java
+++ b/src/de/lmu/ifi/dbs/elki/visualization/style/lines/SolidLineStyleLibrary.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.visualization.style.lines;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import org.apache.batik.util.CSSConstants;
diff --git a/src/de/lmu/ifi/dbs/elki/visualization/style/marker/MarkerLibrary.java b/src/de/lmu/ifi/dbs/elki/visualization/style/marker/MarkerLibrary.java
index 779d6c2e..c45b9fe4 100644
--- a/src/de/lmu/ifi/dbs/elki/visualization/style/marker/MarkerLibrary.java
+++ b/src/de/lmu/ifi/dbs/elki/visualization/style/marker/MarkerLibrary.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.visualization.style.marker;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import org.w3c.dom.Element;
diff --git a/src/de/lmu/ifi/dbs/elki/visualization/style/marker/MinimalMarkers.java b/src/de/lmu/ifi/dbs/elki/visualization/style/marker/MinimalMarkers.java
index 518a494b..10ea2afb 100644
--- a/src/de/lmu/ifi/dbs/elki/visualization/style/marker/MinimalMarkers.java
+++ b/src/de/lmu/ifi/dbs/elki/visualization/style/marker/MinimalMarkers.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.visualization.style.marker;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import org.apache.batik.util.SVGConstants;
import org.w3c.dom.Element;
diff --git a/src/de/lmu/ifi/dbs/elki/visualization/style/marker/PrettyMarkers.java b/src/de/lmu/ifi/dbs/elki/visualization/style/marker/PrettyMarkers.java
index 3043a602..2bab0f2c 100644
--- a/src/de/lmu/ifi/dbs/elki/visualization/style/marker/PrettyMarkers.java
+++ b/src/de/lmu/ifi/dbs/elki/visualization/style/marker/PrettyMarkers.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.visualization.style.marker;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import org.apache.batik.util.SVGConstants;
import org.w3c.dom.Element;
diff --git a/src/de/lmu/ifi/dbs/elki/visualization/style/neon.properties b/src/de/lmu/ifi/dbs/elki/visualization/style/neon.properties
index 17ad296c..859cc465 100644
--- a/src/de/lmu/ifi/dbs/elki/visualization/style/neon.properties
+++ b/src/de/lmu/ifi/dbs/elki/visualization/style/neon.properties
@@ -11,7 +11,7 @@ text-size=0.02
## Text color
text-color=white
## Default margin (relative)
-margin.size=0.15
+margin.size=0.10
## Named color for the page background
page.background-color=black
@@ -57,6 +57,9 @@ plot.dot.size=0.002
## Reference points
plot.referencepoints.size=0.003
plot.referencepoints.color=red
+## Polygons
+plot.polygons.line-width=0.001
+plot.polygons.color=grey
## Curve vis (ROC curves) labels:
curve.labels.text-size=0.04
diff --git a/src/de/lmu/ifi/dbs/elki/visualization/style/presentation.properties b/src/de/lmu/ifi/dbs/elki/visualization/style/presentation.properties
index 76ffbe94..dcc35e31 100644
--- a/src/de/lmu/ifi/dbs/elki/visualization/style/presentation.properties
+++ b/src/de/lmu/ifi/dbs/elki/visualization/style/presentation.properties
@@ -11,7 +11,7 @@ text-size=0.03
## Text color
text-color=black
## Default margin (relative)
-margin.size=0.15
+margin.size=0.10
## Named color for the page background
page.background-color=white
@@ -57,6 +57,9 @@ plot.dot.size=0.004
## Reference points
plot.referencepoints.size=0.006
plot.referencepoints.color=red
+## Polygons
+plot.polygons.line-width=0.001
+plot.polygons.color=grey
## Curve vis (ROC curves) labels:
curve.labels.text-size=0.06
diff --git a/src/de/lmu/ifi/dbs/elki/visualization/svg/SVGHyperCube.java b/src/de/lmu/ifi/dbs/elki/visualization/svg/SVGHyperCube.java
index 9c0db30e..18bbeb06 100644
--- a/src/de/lmu/ifi/dbs/elki/visualization/svg/SVGHyperCube.java
+++ b/src/de/lmu/ifi/dbs/elki/visualization/svg/SVGHyperCube.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.visualization.svg;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.ArrayList;
import java.util.BitSet;
diff --git a/src/de/lmu/ifi/dbs/elki/visualization/svg/SVGHyperSphere.java b/src/de/lmu/ifi/dbs/elki/visualization/svg/SVGHyperSphere.java
index 67aba6d0..169c8698 100644
--- a/src/de/lmu/ifi/dbs/elki/visualization/svg/SVGHyperSphere.java
+++ b/src/de/lmu/ifi/dbs/elki/visualization/svg/SVGHyperSphere.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.visualization.svg;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.BitSet;
diff --git a/src/de/lmu/ifi/dbs/elki/visualization/svg/SVGPath.java b/src/de/lmu/ifi/dbs/elki/visualization/svg/SVGPath.java
index 4802eebd..2be331ca 100644
--- a/src/de/lmu/ifi/dbs/elki/visualization/svg/SVGPath.java
+++ b/src/de/lmu/ifi/dbs/elki/visualization/svg/SVGPath.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.visualization.svg;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import org.apache.batik.util.SVGConstants;
import org.w3c.dom.Document;
diff --git a/src/de/lmu/ifi/dbs/elki/visualization/svg/SVGPlot.java b/src/de/lmu/ifi/dbs/elki/visualization/svg/SVGPlot.java
index 9b887327..14889fb0 100644
--- a/src/de/lmu/ifi/dbs/elki/visualization/svg/SVGPlot.java
+++ b/src/de/lmu/ifi/dbs/elki/visualization/svg/SVGPlot.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.visualization.svg;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.io.ByteArrayOutputStream;
import java.io.File;
diff --git a/src/de/lmu/ifi/dbs/elki/visualization/svg/SVGSimpleLinearAxis.java b/src/de/lmu/ifi/dbs/elki/visualization/svg/SVGSimpleLinearAxis.java
index 6e993e4d..c32fef04 100644
--- a/src/de/lmu/ifi/dbs/elki/visualization/svg/SVGSimpleLinearAxis.java
+++ b/src/de/lmu/ifi/dbs/elki/visualization/svg/SVGSimpleLinearAxis.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.visualization.svg;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import org.apache.batik.util.SVGConstants;
import org.w3c.dom.Element;
diff --git a/src/de/lmu/ifi/dbs/elki/visualization/svg/SVGUtil.java b/src/de/lmu/ifi/dbs/elki/visualization/svg/SVGUtil.java
index 74366215..b4e59fda 100644
--- a/src/de/lmu/ifi/dbs/elki/visualization/svg/SVGUtil.java
+++ b/src/de/lmu/ifi/dbs/elki/visualization/svg/SVGUtil.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.visualization.svg;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.awt.Color;
import java.text.NumberFormat;
diff --git a/src/de/lmu/ifi/dbs/elki/visualization/svg/UpdateRunner.java b/src/de/lmu/ifi/dbs/elki/visualization/svg/UpdateRunner.java
index de462446..03bc9d74 100644
--- a/src/de/lmu/ifi/dbs/elki/visualization/svg/UpdateRunner.java
+++ b/src/de/lmu/ifi/dbs/elki/visualization/svg/UpdateRunner.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.visualization.svg;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.Collection;
import java.util.Queue;
diff --git a/src/de/lmu/ifi/dbs/elki/visualization/svg/UpdateSynchronizer.java b/src/de/lmu/ifi/dbs/elki/visualization/svg/UpdateSynchronizer.java
index 24d041b9..c65ae719 100644
--- a/src/de/lmu/ifi/dbs/elki/visualization/svg/UpdateSynchronizer.java
+++ b/src/de/lmu/ifi/dbs/elki/visualization/svg/UpdateSynchronizer.java
@@ -1,26 +1,28 @@
package de.lmu.ifi.dbs.elki.visualization.svg;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
+
/**
* API to synchronize updates
diff --git a/src/de/lmu/ifi/dbs/elki/visualization/visualizers/AbstractVisFactory.java b/src/de/lmu/ifi/dbs/elki/visualization/visualizers/AbstractVisFactory.java
index cd728a2a..4b017fac 100644
--- a/src/de/lmu/ifi/dbs/elki/visualization/visualizers/AbstractVisFactory.java
+++ b/src/de/lmu/ifi/dbs/elki/visualization/visualizers/AbstractVisFactory.java
@@ -1,27 +1,29 @@
package de.lmu.ifi.dbs.elki.visualization.visualizers;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
+import de.lmu.ifi.dbs.elki.visualization.VisualizationTask;
import de.lmu.ifi.dbs.elki.visualization.visualizers.thumbs.ThumbnailVisualization;
/**
diff --git a/src/de/lmu/ifi/dbs/elki/visualization/visualizers/AbstractVisualization.java b/src/de/lmu/ifi/dbs/elki/visualization/visualizers/AbstractVisualization.java
index c91a48e0..8d1b184d 100644
--- a/src/de/lmu/ifi/dbs/elki/visualization/visualizers/AbstractVisualization.java
+++ b/src/de/lmu/ifi/dbs/elki/visualization/visualizers/AbstractVisualization.java
@@ -1,31 +1,34 @@
package de.lmu.ifi.dbs.elki.visualization.visualizers;
-/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import org.w3c.dom.Element;
import de.lmu.ifi.dbs.elki.result.Result;
import de.lmu.ifi.dbs.elki.result.ResultListener;
+import de.lmu.ifi.dbs.elki.visualization.VisualizationTask;
+import de.lmu.ifi.dbs.elki.visualization.VisualizerContext;
import de.lmu.ifi.dbs.elki.visualization.svg.SVGPlot;
import de.lmu.ifi.dbs.elki.visualization.visualizers.events.ContextChangeListener;
import de.lmu.ifi.dbs.elki.visualization.visualizers.events.ContextChangedEvent;
diff --git a/src/de/lmu/ifi/dbs/elki/visualization/visualizers/StaticVisualization.java b/src/de/lmu/ifi/dbs/elki/visualization/visualizers/StaticVisualization.java
index 7aebb4c5..cfc653ef 100644
--- a/src/de/lmu/ifi/dbs/elki/visualization/visualizers/StaticVisualization.java
+++ b/src/de/lmu/ifi/dbs/elki/visualization/visualizers/StaticVisualization.java
@@ -1,29 +1,32 @@
package de.lmu.ifi.dbs.elki.visualization.visualizers;
-/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import org.w3c.dom.Element;
+import de.lmu.ifi.dbs.elki.visualization.VisualizationTask;
+
/**
* Static visualization
*
diff --git a/src/de/lmu/ifi/dbs/elki/visualization/visualizers/VisFactory.java b/src/de/lmu/ifi/dbs/elki/visualization/visualizers/VisFactory.java
index b671aede..b89d1ae0 100644
--- a/src/de/lmu/ifi/dbs/elki/visualization/visualizers/VisFactory.java
+++ b/src/de/lmu/ifi/dbs/elki/visualization/visualizers/VisFactory.java
@@ -1,32 +1,33 @@
package de.lmu.ifi.dbs.elki.visualization.visualizers;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.result.HierarchicalResult;
import de.lmu.ifi.dbs.elki.result.Result;
import de.lmu.ifi.dbs.elki.result.ResultProcessor;
import de.lmu.ifi.dbs.elki.utilities.optionhandling.Parameterizable;
-import de.lmu.ifi.dbs.elki.visualization.projections.Projection;
+import de.lmu.ifi.dbs.elki.visualization.VisualizationTask;
/**
* Defines the requirements for a visualizer. <br>
@@ -65,11 +66,4 @@ public interface VisFactory extends ResultProcessor, Parameterizable {
* @return Visualization
*/
public Visualization makeVisualizationOrThumbnail(VisualizationTask task);
-
- /**
- * Get the projection type.
- *
- * @return projection type
- */
- public Class<? extends Projection> getProjectionType();
} \ No newline at end of file
diff --git a/src/de/lmu/ifi/dbs/elki/visualization/visualizers/Visualization.java b/src/de/lmu/ifi/dbs/elki/visualization/visualizers/Visualization.java
index 0d3f36fc..d2dfb687 100644
--- a/src/de/lmu/ifi/dbs/elki/visualization/visualizers/Visualization.java
+++ b/src/de/lmu/ifi/dbs/elki/visualization/visualizers/Visualization.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.visualization.visualizers;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import org.w3c.dom.Element;
diff --git a/src/de/lmu/ifi/dbs/elki/visualization/visualizers/VisualizerUtil.java b/src/de/lmu/ifi/dbs/elki/visualization/visualizers/VisualizerUtil.java
index 73810373..14984a5d 100644
--- a/src/de/lmu/ifi/dbs/elki/visualization/visualizers/VisualizerUtil.java
+++ b/src/de/lmu/ifi/dbs/elki/visualization/visualizers/VisualizerUtil.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.visualization.visualizers;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.Iterator;
@@ -33,6 +34,8 @@ import de.lmu.ifi.dbs.elki.result.Result;
import de.lmu.ifi.dbs.elki.result.ResultUtil;
import de.lmu.ifi.dbs.elki.utilities.iterator.AbstractFilteredIterator;
import de.lmu.ifi.dbs.elki.utilities.iterator.IterableIterator;
+import de.lmu.ifi.dbs.elki.visualization.VisualizationTask;
+import de.lmu.ifi.dbs.elki.visualization.VisualizerContext;
/**
* Visualizer utilities.
diff --git a/src/de/lmu/ifi/dbs/elki/visualization/visualizers/events/ContextChangeListener.java b/src/de/lmu/ifi/dbs/elki/visualization/visualizers/events/ContextChangeListener.java
index 109b1119..2d7d3e91 100644
--- a/src/de/lmu/ifi/dbs/elki/visualization/visualizers/events/ContextChangeListener.java
+++ b/src/de/lmu/ifi/dbs/elki/visualization/visualizers/events/ContextChangeListener.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.visualization.visualizers.events;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.EventListener;
diff --git a/src/de/lmu/ifi/dbs/elki/visualization/visualizers/events/ContextChangedEvent.java b/src/de/lmu/ifi/dbs/elki/visualization/visualizers/events/ContextChangedEvent.java
index b313cb1f..6d3aa24a 100644
--- a/src/de/lmu/ifi/dbs/elki/visualization/visualizers/events/ContextChangedEvent.java
+++ b/src/de/lmu/ifi/dbs/elki/visualization/visualizers/events/ContextChangedEvent.java
@@ -1,30 +1,31 @@
package de.lmu.ifi.dbs.elki.visualization.visualizers.events;
-/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.EventObject;
-import de.lmu.ifi.dbs.elki.visualization.visualizers.VisualizerContext;
+import de.lmu.ifi.dbs.elki.visualization.VisualizerContext;
/**
* Event produced when the visualizer context has changed.
diff --git a/src/de/lmu/ifi/dbs/elki/visualization/visualizers/events/ResizedEvent.java b/src/de/lmu/ifi/dbs/elki/visualization/visualizers/events/ResizedEvent.java
index 203778e9..6eb6cad3 100644
--- a/src/de/lmu/ifi/dbs/elki/visualization/visualizers/events/ResizedEvent.java
+++ b/src/de/lmu/ifi/dbs/elki/visualization/visualizers/events/ResizedEvent.java
@@ -1,28 +1,29 @@
package de.lmu.ifi.dbs.elki.visualization.visualizers.events;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
-import de.lmu.ifi.dbs.elki.visualization.visualizers.VisualizerContext;
+import de.lmu.ifi.dbs.elki.visualization.VisualizerContext;
/**
* Event triggered when the contexts view was resized.
diff --git a/src/de/lmu/ifi/dbs/elki/visualization/visualizers/optics/AbstractOPTICSVisualization.java b/src/de/lmu/ifi/dbs/elki/visualization/visualizers/optics/AbstractOPTICSVisualization.java
new file mode 100644
index 00000000..9cb95c23
--- /dev/null
+++ b/src/de/lmu/ifi/dbs/elki/visualization/visualizers/optics/AbstractOPTICSVisualization.java
@@ -0,0 +1,91 @@
+package de.lmu.ifi.dbs.elki.visualization.visualizers.optics;
+
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
+
+import java.util.List;
+
+import org.apache.batik.util.SVGConstants;
+
+import de.lmu.ifi.dbs.elki.distance.distancevalue.Distance;
+import de.lmu.ifi.dbs.elki.result.optics.ClusterOrderEntry;
+import de.lmu.ifi.dbs.elki.visualization.VisualizationTask;
+import de.lmu.ifi.dbs.elki.visualization.projector.OPTICSProjector;
+import de.lmu.ifi.dbs.elki.visualization.style.StyleLibrary;
+import de.lmu.ifi.dbs.elki.visualization.svg.SVGUtil;
+import de.lmu.ifi.dbs.elki.visualization.visualizers.AbstractVisualization;
+
+/**
+ * Abstract base class for OPTICS visualizer
+ *
+ * @author Erich Schubert
+ *
+ * @param <D>
+ */
+public abstract class AbstractOPTICSVisualization<D extends Distance<D>> extends AbstractVisualization {
+ /**
+ * The plot
+ */
+ final protected OPTICSProjector<D> optics;
+
+ /**
+ * Width of plot (in display units)
+ */
+ protected double plotwidth;
+
+ /**
+ * Height of plot (in display units)
+ */
+ protected double plotheight;
+
+ /**
+ * Constructor.
+ *
+ * @param task Visualization task.
+ */
+ public AbstractOPTICSVisualization(VisualizationTask task) {
+ super(task);
+ this.optics = task.getResult();
+ }
+
+ /**
+ * Produce a new layer element.
+ */
+ protected void makeLayerElement() {
+ plotwidth = StyleLibrary.SCALE;
+ plotheight = StyleLibrary.SCALE / optics.getOPTICSPlot(context).getRatio();
+ final double margin = context.getStyleLibrary().getSize(StyleLibrary.MARGIN);
+ layer = SVGUtil.svgElement(svgp.getDocument(), SVGConstants.SVG_G_TAG);
+ final String transform = SVGUtil.makeMarginTransform(task.getWidth(), task.getHeight(), plotwidth, plotheight, margin / 2);
+ SVGUtil.setAtt(layer, SVGConstants.SVG_TRANSFORM_ATTRIBUTE, transform);
+ }
+
+ /**
+ * Access the raw cluster order
+ *
+ * @return Cluster order
+ */
+ protected List<ClusterOrderEntry<D>> getClusterOrder() {
+ return optics.getResult().getClusterOrder();
+ }
+} \ No newline at end of file
diff --git a/src/de/lmu/ifi/dbs/elki/visualization/visualizers/optics/OPTICSClusterVisualization.java b/src/de/lmu/ifi/dbs/elki/visualization/visualizers/optics/OPTICSClusterVisualization.java
new file mode 100644
index 00000000..0898d9d0
--- /dev/null
+++ b/src/de/lmu/ifi/dbs/elki/visualization/visualizers/optics/OPTICSClusterVisualization.java
@@ -0,0 +1,218 @@
+package de.lmu.ifi.dbs.elki.visualization.visualizers.optics;
+
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
+
+import java.util.Iterator;
+import java.util.List;
+
+import org.apache.batik.util.SVGConstants;
+import org.w3c.dom.Element;
+
+import de.lmu.ifi.dbs.elki.data.Cluster;
+import de.lmu.ifi.dbs.elki.data.Clustering;
+import de.lmu.ifi.dbs.elki.data.model.OPTICSModel;
+import de.lmu.ifi.dbs.elki.distance.distancevalue.Distance;
+import de.lmu.ifi.dbs.elki.distance.distancevalue.DoubleDistance;
+import de.lmu.ifi.dbs.elki.logging.Logging;
+import de.lmu.ifi.dbs.elki.result.HierarchicalResult;
+import de.lmu.ifi.dbs.elki.result.Result;
+import de.lmu.ifi.dbs.elki.result.ResultUtil;
+import de.lmu.ifi.dbs.elki.utilities.iterator.IterableUtil;
+import de.lmu.ifi.dbs.elki.visualization.VisualizationTask;
+import de.lmu.ifi.dbs.elki.visualization.css.CSSClass;
+import de.lmu.ifi.dbs.elki.visualization.projector.OPTICSProjector;
+import de.lmu.ifi.dbs.elki.visualization.style.StyleLibrary;
+import de.lmu.ifi.dbs.elki.visualization.svg.SVGUtil;
+import de.lmu.ifi.dbs.elki.visualization.visualizers.AbstractVisFactory;
+import de.lmu.ifi.dbs.elki.visualization.visualizers.Visualization;
+
+/**
+ * Visualize the clusters and cluster hierarchy found by OPTICS on the OPTICS
+ * Plot.
+ *
+ * @author Erich Schubert
+ *
+ * @apiviz.uses ClusterOrderResult
+ * @apiviz.uses OPTICSPlot
+ *
+ * @param <D> Distance type (actually unused)
+ */
+public class OPTICSClusterVisualization<D extends Distance<D>> extends AbstractOPTICSVisualization<D> {
+ /**
+ * The logger for this class.
+ */
+ private static final Logging logger = Logging.getLogger(OPTICSClusterVisualization.class);
+
+ /**
+ * A short name characterizing this Visualizer.
+ */
+ private static final String NAME = "OPTICS Cluster Ranges";
+
+ /**
+ * CSS class for markers
+ */
+ protected static final String CSS_BRACKET = "opticsBracket";
+
+ /**
+ * Optics clustering we visualize
+ */
+ public static final String CLUSTERING = "OPTICSClustering";
+
+ /**
+ * Our clustering
+ */
+ Clustering<OPTICSModel> clus;
+
+ /**
+ * Constructor.
+ *
+ * @param task Visualization task
+ */
+ public OPTICSClusterVisualization(VisualizationTask task) {
+ super(task);
+ this.clus = task.getGenerics(CLUSTERING, Clustering.class);
+ context.addResultListener(this);
+ incrementalRedraw();
+ }
+
+ /**
+ * Find the first OPTICS clustering child of a result.
+ *
+ * @param result Result to start searching at
+ * @return OPTICS clustering
+ */
+ @SuppressWarnings("unchecked")
+ protected static Clustering<OPTICSModel> findOPTICSClustering(Result result) {
+ Iterator<Clustering<?>> cs = ResultUtil.filteredResults(result, Clustering.class);
+ while (cs.hasNext()) {
+ Clustering<?> clus = cs.next();
+ if(clus.getToplevelClusters().size() == 0) {
+ continue;
+ }
+ try {
+ Cluster<?> firstcluster = clus.getToplevelClusters().iterator().next();
+ if(firstcluster.getModel() instanceof OPTICSModel) {
+ return (Clustering<OPTICSModel>) clus;
+ }
+ } catch(Exception e) {
+ // Empty clustering? Shouldn't happen.
+ logger.warning("Clustering with no cluster detected.", e);
+ }
+ }
+ return null;
+ }
+
+ @Override
+ protected void redraw() {
+ makeLayerElement();
+ addCSSClasses();
+ drawClusters(clus.getToplevelClusters(), 1);
+ }
+
+ /**
+ * Recursively draw clusters
+ *
+ * @param clusters Current set of clusters
+ * @param depth Recursion depth
+ */
+ private void drawClusters(List<Cluster<OPTICSModel>> clusters, int depth) {
+ final double scale = StyleLibrary.SCALE;
+ for(Cluster<OPTICSModel> cluster : clusters) {
+ try {
+ OPTICSModel model = cluster.getModel();
+ final double x1 = plotwidth * ((model.getStartIndex() + .25) / this.optics.getResult().getClusterOrder().size());
+ final double x2 = plotwidth * ((model.getEndIndex() + .75) / this.optics.getResult().getClusterOrder().size());
+ final double y = plotheight + depth * scale * 0.01;
+ Element e = svgp.svgLine(x1, y, x2, y);
+ SVGUtil.addCSSClass(e, CSS_BRACKET);
+ layer.appendChild(e);
+ }
+ catch(ClassCastException e) {
+ logger.warning("Expected OPTICSModel, got: " + cluster.getModel().getClass().getSimpleName());
+ }
+ // Descend
+ final List<Cluster<OPTICSModel>> children = cluster.getChildren();
+ if(children != null) {
+ drawClusters(children, depth + 1);
+ }
+ }
+ }
+
+ /**
+ * Adds the required CSS-Classes
+ */
+ private void addCSSClasses() {
+ // Class for the markers
+ if(!svgp.getCSSClassManager().contains(CSS_BRACKET)) {
+ final CSSClass cls = new CSSClass(this, CSS_BRACKET);
+ cls.setStatement(SVGConstants.CSS_STROKE_PROPERTY, context.getStyleLibrary().getColor(StyleLibrary.PLOT));
+ cls.setStatement(SVGConstants.CSS_STROKE_WIDTH_PROPERTY, context.getStyleLibrary().getLineWidth(StyleLibrary.PLOT));
+ svgp.addCSSClassOrLogError(cls);
+ }
+ }
+
+ /**
+ * Factory class for OPTICS plot selections.
+ *
+ * @author Erich Schubert
+ *
+ * @apiviz.stereotype factory
+ * @apiviz.uses OPTICSPlotSelectionVisualization oneway - - «create»
+ */
+ public static class Factory extends AbstractVisFactory {
+ /**
+ * Constructor, adhering to
+ * {@link de.lmu.ifi.dbs.elki.utilities.optionhandling.Parameterizable}
+ */
+ public Factory() {
+ super();
+ }
+
+ @Override
+ public void processNewResult(HierarchicalResult baseResult, Result result) {
+ Iterator<OPTICSProjector<?>> ops = ResultUtil.filteredResults(result, OPTICSProjector.class);
+ for(OPTICSProjector<?> p : IterableUtil.fromIterator(ops)) {
+ final Clustering<OPTICSModel> ocl = findOPTICSClustering(baseResult);
+ if(ocl != null) {
+ final VisualizationTask task = new VisualizationTask(NAME, p, null, this);
+ task.put(VisualizationTask.META_LEVEL, VisualizationTask.LEVEL_INTERACTIVE);
+ task.put(CLUSTERING, ocl);
+ baseResult.getHierarchy().add(p, task);
+ }
+ }
+ // TODO: also run when a new clustering is added, instead of just new projections?
+ }
+
+ @Override
+ public Visualization makeVisualization(VisualizationTask task) {
+ return new OPTICSClusterVisualization<DoubleDistance>(task);
+ }
+
+ @Override
+ public boolean allowThumbnails(@SuppressWarnings("unused") VisualizationTask task) {
+ // Don't use thumbnails
+ return false;
+ }
+ }
+} \ No newline at end of file
diff --git a/src/de/lmu/ifi/dbs/elki/visualization/visualizers/visunproj/OPTICSPlotCutVisualization.java b/src/de/lmu/ifi/dbs/elki/visualization/visualizers/optics/OPTICSPlotCutVisualization.java
index 9c44c839..9f2a5734 100644
--- a/src/de/lmu/ifi/dbs/elki/visualization/visualizers/visunproj/OPTICSPlotCutVisualization.java
+++ b/src/de/lmu/ifi/dbs/elki/visualization/visualizers/optics/OPTICSPlotCutVisualization.java
@@ -1,28 +1,29 @@
-package de.lmu.ifi.dbs.elki.visualization.visualizers.visunproj;
-/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
-
-import java.util.Collection;
+package de.lmu.ifi.dbs.elki.visualization.visualizers.optics;
+
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
+
+import java.util.Iterator;
import org.apache.batik.util.SVG12Constants;
import org.apache.batik.util.SVGConstants;
@@ -39,17 +40,16 @@ import de.lmu.ifi.dbs.elki.result.Result;
import de.lmu.ifi.dbs.elki.result.ResultUtil;
import de.lmu.ifi.dbs.elki.result.optics.ClusterOrderResult;
import de.lmu.ifi.dbs.elki.utilities.FormatUtil;
+import de.lmu.ifi.dbs.elki.utilities.iterator.IterableUtil;
+import de.lmu.ifi.dbs.elki.visualization.VisualizationTask;
import de.lmu.ifi.dbs.elki.visualization.batikutil.DragableArea;
import de.lmu.ifi.dbs.elki.visualization.css.CSSClass;
import de.lmu.ifi.dbs.elki.visualization.opticsplot.OPTICSCut;
-import de.lmu.ifi.dbs.elki.visualization.opticsplot.OPTICSPlot;
-import de.lmu.ifi.dbs.elki.visualization.projections.Projection;
+import de.lmu.ifi.dbs.elki.visualization.projector.OPTICSProjector;
import de.lmu.ifi.dbs.elki.visualization.style.StyleLibrary;
import de.lmu.ifi.dbs.elki.visualization.svg.SVGUtil;
import de.lmu.ifi.dbs.elki.visualization.visualizers.AbstractVisFactory;
-import de.lmu.ifi.dbs.elki.visualization.visualizers.AbstractVisualization;
import de.lmu.ifi.dbs.elki.visualization.visualizers.Visualization;
-import de.lmu.ifi.dbs.elki.visualization.visualizers.VisualizationTask;
/**
* Visualizes a cut in an OPTICS Plot to select an Epsilon value and generate a
@@ -62,23 +62,13 @@ import de.lmu.ifi.dbs.elki.visualization.visualizers.VisualizationTask;
*
* @param <D> distance type
*/
-public class OPTICSPlotCutVisualization<D extends Distance<D>> extends AbstractVisualization implements DragableArea.DragListener {
+public class OPTICSPlotCutVisualization<D extends Distance<D>> extends AbstractOPTICSVisualization<D> implements DragableArea.DragListener {
/**
* A short name characterizing this Visualizer.
*/
private static final String NAME = "OPTICS Cut";
/**
- * Our concerned curve
- */
- ClusterOrderResult<D> order;
-
- /**
- * The actual plot
- */
- private OPTICSPlot<D> opticsplot;
-
- /**
* CSS-Styles
*/
protected static final String CSS_LINE = "opticsPlotLine";
@@ -94,11 +84,6 @@ public class OPTICSPlotCutVisualization<D extends Distance<D>> extends AbstractV
private double epsilon = 0.0;
/**
- * The height of the plot
- */
- private double plotHeight;
-
- /**
* Sensitive (clickable) area
*/
private DragableArea eventarea = null;
@@ -125,11 +110,6 @@ public class OPTICSPlotCutVisualization<D extends Distance<D>> extends AbstractV
*/
public OPTICSPlotCutVisualization(VisualizationTask task) {
super(task);
- this.order = task.getResult();
- this.opticsplot = OPTICSPlot.plotForClusterOrder(this.order, context);
- this.plotHeight = StyleLibrary.SCALE / opticsplot.getRatio();
-
- synchronizedRedraw();
}
@Override
@@ -139,24 +119,15 @@ public class OPTICSPlotCutVisualization<D extends Distance<D>> extends AbstractV
@Override
protected void incrementalRedraw() {
- addCSSClasses();
-
- final double scale = StyleLibrary.SCALE;
-
if(layer == null) {
- layer = svgp.svgElement(SVGConstants.SVG_G_TAG);
- final double sizex = scale;
- final double sizey = scale * task.getHeight() / task.getWidth();
- final double margin = context.getStyleLibrary().getSize(StyleLibrary.MARGIN);
- final String transform = SVGUtil.makeMarginTransform(task.getWidth(), task.getHeight(), sizex, sizey, margin);
- SVGUtil.setAtt(layer, SVGConstants.SVG_TRANSFORM_ATTRIBUTE, transform);
- SVGUtil.setAtt(layer, SVGConstants.SVG_NAME_ATTRIBUTE, "cut layer");
+ makeLayerElement();
+ addCSSClasses();
}
// TODO make the number of digits configurable
final String label = (epsilon != 0.0) ? FormatUtil.format(epsilon, 4) : "";
// compute absolute y-value of bar
- final double yAct = plotHeight - getYFromEpsilon(epsilon);
+ final double yAct = plotheight - getYFromEpsilon(epsilon);
if(elemText == null) {
elemText = svgp.svgText(StyleLibrary.SCALE * 1.05, yAct, label);
@@ -170,7 +141,7 @@ public class OPTICSPlotCutVisualization<D extends Distance<D>> extends AbstractV
// line and handle
if(elementLine == null) {
- elementLine = svgp.svgLine(0, yAct, StyleLibrary.SCALE * 1.05, yAct);
+ elementLine = svgp.svgLine(0, yAct, StyleLibrary.SCALE * 1.04, yAct);
SVGUtil.addCSSClass(elementLine, CSS_LINE);
layer.appendChild(elementLine);
}
@@ -179,7 +150,7 @@ public class OPTICSPlotCutVisualization<D extends Distance<D>> extends AbstractV
SVGUtil.setAtt(elementLine, SVG12Constants.SVG_Y2_ATTRIBUTE, yAct);
}
if(elementPoint == null) {
- elementPoint = svgp.svgCircle(StyleLibrary.SCALE * 1.05, yAct, StyleLibrary.SCALE * 0.004);
+ elementPoint = svgp.svgCircle(StyleLibrary.SCALE * 1.04, yAct, StyleLibrary.SCALE * 0.004);
SVGUtil.addCSSClass(elementPoint, CSS_LINE);
layer.appendChild(elementPoint);
}
@@ -188,7 +159,7 @@ public class OPTICSPlotCutVisualization<D extends Distance<D>> extends AbstractV
}
if(eventarea == null) {
- eventarea = new DragableArea(svgp, StyleLibrary.SCALE, 0, StyleLibrary.SCALE * 0.1, plotHeight, this);
+ eventarea = new DragableArea(svgp, StyleLibrary.SCALE, 0, StyleLibrary.SCALE * 0.1, plotheight, this);
layer.appendChild(eventarea.getElement());
}
}
@@ -209,10 +180,10 @@ public class OPTICSPlotCutVisualization<D extends Distance<D>> extends AbstractV
if(y < 0) {
y = 0;
}
- if(y > plotHeight) {
- y = plotHeight;
+ if(y > plotheight) {
+ y = plotheight;
}
- return opticsplot.getScale().getUnscaled(y / plotHeight);
+ return optics.getOPTICSPlot(context).getScale().getUnscaled(y / plotheight);
}
/**
@@ -222,19 +193,19 @@ public class OPTICSPlotCutVisualization<D extends Distance<D>> extends AbstractV
* @return y-Value
*/
protected double getYFromEpsilon(double epsilon) {
- double y = opticsplot.getScale().getScaled(epsilon) * plotHeight;
+ double y = optics.getOPTICSPlot(context).getScale().getScaled(epsilon) * plotheight;
if(y < 0) {
y = 0;
}
- if(y > plotHeight) {
- y = plotHeight;
+ if(y > plotheight) {
+ y = plotheight;
}
return y;
}
@Override
public boolean startDrag(SVGPoint start, @SuppressWarnings("unused") Event evt) {
- epsilon = getEpsilonFromY(plotHeight - start.getY());
+ epsilon = getEpsilonFromY(plotheight - start.getY());
// opvis.unsetEpsilonExcept(this);
synchronizedRedraw();
return true;
@@ -243,7 +214,7 @@ public class OPTICSPlotCutVisualization<D extends Distance<D>> extends AbstractV
@Override
public boolean duringDrag(@SuppressWarnings("unused") SVGPoint start, SVGPoint end, @SuppressWarnings("unused") Event evt, boolean inside) {
if(inside) {
- epsilon = getEpsilonFromY(plotHeight - end.getY());
+ epsilon = getEpsilonFromY(plotheight - end.getY());
}
// opvis.unsetEpsilonExcept(this);
synchronizedRedraw();
@@ -253,11 +224,12 @@ public class OPTICSPlotCutVisualization<D extends Distance<D>> extends AbstractV
@Override
public boolean endDrag(@SuppressWarnings("unused") SVGPoint start, SVGPoint end, @SuppressWarnings("unused") Event evt, boolean inside) {
if(inside) {
- epsilon = getEpsilonFromY(plotHeight - end.getY());
+ epsilon = getEpsilonFromY(plotheight - end.getY());
// opvis.unsetEpsilonExcept(this);
// FIXME: replace an existing optics cut result!
- Clustering<Model> cl = OPTICSCut.makeOPTICSCut(order, opticsplot.getDistanceAdapter(), epsilon);
+ final ClusterOrderResult<D> order = optics.getResult();
+ Clustering<Model> cl = OPTICSCut.makeOPTICSCut(order, optics.getOPTICSPlot(context).getDistanceAdapter(), epsilon);
order.addChildResult(cl);
}
context.resultChanged(this.task);
@@ -308,12 +280,11 @@ public class OPTICSPlotCutVisualization<D extends Distance<D>> extends AbstractV
@Override
public void processNewResult(HierarchicalResult baseResult, Result result) {
- Collection<OPTICSPlot<?>> plots = ResultUtil.filterResults(result, OPTICSPlot.class);
- for(OPTICSPlot<?> plot : plots) {
- ClusterOrderResult<?> co = plot.getClusterOrder();
- final VisualizationTask task = new VisualizationTask(NAME, co, null, this, plot);
+ Iterator<OPTICSProjector<?>> ops = ResultUtil.filteredResults(result, OPTICSProjector.class);
+ for(OPTICSProjector<?> p : IterableUtil.fromIterator(ops)) {
+ final VisualizationTask task = new VisualizationTask(NAME, p, null, this);
task.put(VisualizationTask.META_LEVEL, VisualizationTask.LEVEL_INTERACTIVE);
- baseResult.getHierarchy().add(plot, task);
+ baseResult.getHierarchy().add(p, task);
}
}
@@ -323,8 +294,9 @@ public class OPTICSPlotCutVisualization<D extends Distance<D>> extends AbstractV
}
@Override
- public Class<? extends Projection> getProjectionType() {
- return null;
+ public boolean allowThumbnails(@SuppressWarnings("unused") VisualizationTask task) {
+ // Don't use thumbnails
+ return false;
}
}
} \ No newline at end of file
diff --git a/src/de/lmu/ifi/dbs/elki/visualization/visualizers/visunproj/OPTICSPlotSelectionVisualization.java b/src/de/lmu/ifi/dbs/elki/visualization/visualizers/optics/OPTICSPlotSelectionVisualization.java
index d5c5a232..b75bd3b5 100644
--- a/src/de/lmu/ifi/dbs/elki/visualization/visualizers/visunproj/OPTICSPlotSelectionVisualization.java
+++ b/src/de/lmu/ifi/dbs/elki/visualization/visualizers/optics/OPTICSPlotSelectionVisualization.java
@@ -1,28 +1,29 @@
-package de.lmu.ifi.dbs.elki.visualization.visualizers.visunproj;
-/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
-
-import java.util.Collection;
+package de.lmu.ifi.dbs.elki.visualization.visualizers.optics;
+
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
+
+import java.util.Iterator;
import java.util.List;
import org.apache.batik.dom.events.DOMMouseEvent;
@@ -44,18 +45,14 @@ import de.lmu.ifi.dbs.elki.result.Result;
import de.lmu.ifi.dbs.elki.result.ResultUtil;
import de.lmu.ifi.dbs.elki.result.SelectionResult;
import de.lmu.ifi.dbs.elki.result.optics.ClusterOrderEntry;
-import de.lmu.ifi.dbs.elki.result.optics.ClusterOrderResult;
+import de.lmu.ifi.dbs.elki.utilities.iterator.IterableUtil;
+import de.lmu.ifi.dbs.elki.visualization.VisualizationTask;
import de.lmu.ifi.dbs.elki.visualization.batikutil.DragableArea;
import de.lmu.ifi.dbs.elki.visualization.css.CSSClass;
-import de.lmu.ifi.dbs.elki.visualization.opticsplot.OPTICSPlot;
-import de.lmu.ifi.dbs.elki.visualization.projections.Projection;
-import de.lmu.ifi.dbs.elki.visualization.style.StyleLibrary;
+import de.lmu.ifi.dbs.elki.visualization.projector.OPTICSProjector;
import de.lmu.ifi.dbs.elki.visualization.svg.SVGUtil;
import de.lmu.ifi.dbs.elki.visualization.visualizers.AbstractVisFactory;
-import de.lmu.ifi.dbs.elki.visualization.visualizers.AbstractVisualization;
import de.lmu.ifi.dbs.elki.visualization.visualizers.Visualization;
-import de.lmu.ifi.dbs.elki.visualization.visualizers.VisualizationTask;
-import de.lmu.ifi.dbs.elki.visualization.visualizers.thumbs.ThumbnailVisualization;
/**
* Handle the marker in an OPTICS plot.
@@ -68,7 +65,7 @@ import de.lmu.ifi.dbs.elki.visualization.visualizers.thumbs.ThumbnailVisualizati
*
* @param <D> distance type
*/
-public class OPTICSPlotSelectionVisualization<D extends Distance<D>> extends AbstractVisualization implements DragableArea.DragListener {
+public class OPTICSPlotSelectionVisualization<D extends Distance<D>> extends AbstractOPTICSVisualization<D> implements DragableArea.DragListener {
/**
* The logger for this class.
*/
@@ -100,16 +97,6 @@ public class OPTICSPlotSelectionVisualization<D extends Distance<D>> extends Abs
}
/**
- * Our concerned curve
- */
- ClusterOrderResult<D> co;
-
- /**
- * The plot
- */
- private OPTICSPlot<D> opticsplot;
-
- /**
* Element for the events
*/
private Element etag;
@@ -126,33 +113,20 @@ public class OPTICSPlotSelectionVisualization<D extends Distance<D>> extends Abs
*/
public OPTICSPlotSelectionVisualization(VisualizationTask task) {
super(task);
- this.co = task.getResult();
- this.opticsplot = OPTICSPlot.plotForClusterOrder(this.co, context);
context.addResultListener(this);
incrementalRedraw();
}
@Override
protected void redraw() {
- double scale = StyleLibrary.SCALE;
- final double sizex = scale;
- final double sizey = scale * task.getHeight() / task.getWidth();
- final double margin = context.getStyleLibrary().getSize(StyleLibrary.MARGIN);
- layer = SVGUtil.svgElement(svgp.getDocument(), SVGConstants.SVG_G_TAG);
- final String transform = SVGUtil.makeMarginTransform(task.getWidth(), task.getHeight(), sizex, sizey, margin);
- SVGUtil.setAtt(layer, SVGConstants.SVG_TRANSFORM_ATTRIBUTE, transform);
-
+ makeLayerElement();
addCSSClasses();
- this.etag = svgp.svgElement(SVGConstants.SVG_G_TAG);
- this.mtag = svgp.svgElement(SVGConstants.SVG_G_TAG);
-
- double heightPlot = scale / opticsplot.getRatio();
+ mtag = svgp.svgElement(SVGConstants.SVG_G_TAG);
+ addMarker();
- DragableArea drag = new DragableArea(svgp, 0 - scale * 0.1, 0, scale * 1.1, heightPlot, this);
+ DragableArea drag = new DragableArea(svgp, 0 - plotwidth * 0.1, 0, plotwidth * 1.1, plotheight, this);
etag = drag.getElement();
-
- addMarker();
// mtag first, etag must be the top Element
layer.appendChild(mtag);
layer.appendChild(etag);
@@ -162,13 +136,13 @@ public class OPTICSPlotSelectionVisualization<D extends Distance<D>> extends Abs
* Add marker for the selected IDs to mtag
*/
public void addMarker() {
- List<ClusterOrderEntry<D>> order = co.getClusterOrder();
+ List<ClusterOrderEntry<D>> order = getClusterOrder();
// TODO: replace mtag!
DBIDSelection selContext = context.getSelection();
if(selContext != null) {
DBIDs selection = DBIDUtil.ensureSet(selContext.getSelectedIds());
- final double width = StyleLibrary.SCALE / order.size();
+ final double width = plotwidth / order.size();
int begin = -1;
for(int j = 0; j < order.size(); j++) {
DBID id = order.get(j).getID();
@@ -203,16 +177,15 @@ public class OPTICSPlotSelectionVisualization<D extends Distance<D>> extends Abs
* @return SVG-Element svg-rectangle
*/
public Element addMarkerRect(double x1, double width) {
- double heightPlot = StyleLibrary.SCALE / opticsplot.getRatio();
- return svgp.svgRect(x1, 0, width, heightPlot);
+ return svgp.svgRect(x1, 0, width, plotheight);
}
@Override
public boolean startDrag(SVGPoint startPoint, @SuppressWarnings("unused") Event evt) {
- List<ClusterOrderEntry<D>> order = co.getClusterOrder();
+ List<ClusterOrderEntry<D>> order = getClusterOrder();
int mouseActIndex = getSelectedIndex(order, startPoint);
if(mouseActIndex >= 0 && mouseActIndex < order.size()) {
- double width = StyleLibrary.SCALE / order.size();
+ double width = plotwidth / order.size();
double x1 = mouseActIndex * width;
Element marker = addMarkerRect(x1, width);
SVGUtil.setCSSClass(marker, CSS_RANGEMARKER);
@@ -224,12 +197,12 @@ public class OPTICSPlotSelectionVisualization<D extends Distance<D>> extends Abs
@Override
public boolean duringDrag(SVGPoint startPoint, SVGPoint dragPoint, @SuppressWarnings("unused") Event evt, @SuppressWarnings("unused") boolean inside) {
- List<ClusterOrderEntry<D>> order = co.getClusterOrder();
+ List<ClusterOrderEntry<D>> order = getClusterOrder();
int mouseDownIndex = getSelectedIndex(order, startPoint);
int mouseActIndex = getSelectedIndex(order, dragPoint);
final int begin = Math.max(Math.min(mouseDownIndex, mouseActIndex), 0);
final int end = Math.min(Math.max(mouseDownIndex, mouseActIndex), order.size());
- double width = StyleLibrary.SCALE / order.size();
+ double width = plotwidth / order.size();
double x1 = begin * width;
double x2 = (end * width) + width;
mtag.removeChild(mtag.getLastChild());
@@ -241,7 +214,7 @@ public class OPTICSPlotSelectionVisualization<D extends Distance<D>> extends Abs
@Override
public boolean endDrag(SVGPoint startPoint, SVGPoint dragPoint, Event evt, @SuppressWarnings("unused") boolean inside) {
- List<ClusterOrderEntry<D>> order = co.getClusterOrder();
+ List<ClusterOrderEntry<D>> order = getClusterOrder();
int mouseDownIndex = getSelectedIndex(order, startPoint);
int mouseActIndex = getSelectedIndex(order, dragPoint);
Mode mode = getInputMode(evt);
@@ -283,7 +256,7 @@ public class OPTICSPlotSelectionVisualization<D extends Distance<D>> extends Abs
* @return Index of the object
*/
private int getSelectedIndex(List<ClusterOrderEntry<D>> order, SVGPoint cPt) {
- int mouseActIndex = (int) ((cPt.getX() / StyleLibrary.SCALE) * order.size());
+ int mouseActIndex = (int) ((cPt.getX() / plotwidth) * order.size());
return mouseActIndex;
}
@@ -295,7 +268,7 @@ public class OPTICSPlotSelectionVisualization<D extends Distance<D>> extends Abs
* @param end last index to select
*/
protected void updateSelection(Mode mode, int begin, int end) {
- List<ClusterOrderEntry<D>> order = co.getClusterOrder();
+ List<ClusterOrderEntry<D>> order = getClusterOrder();
if(begin < 0 || begin > end || end >= order.size()) {
logger.warning("Invalid range in updateSelection: " + begin + " .. " + end);
return;
@@ -353,7 +326,7 @@ public class OPTICSPlotSelectionVisualization<D extends Distance<D>> extends Abs
@Override
public void resultChanged(Result current) {
- if(current instanceof SelectionResult || current == co || current == opticsplot) {
+ if(current instanceof SelectionResult) {
synchronizedRedraw();
return;
}
@@ -379,12 +352,11 @@ public class OPTICSPlotSelectionVisualization<D extends Distance<D>> extends Abs
@Override
public void processNewResult(HierarchicalResult baseResult, Result result) {
- Collection<OPTICSPlot<?>> plots = ResultUtil.filterResults(result, OPTICSPlot.class);
- for(OPTICSPlot<?> plot : plots) {
- ClusterOrderResult<?> co = plot.getClusterOrder();
- final VisualizationTask task = new VisualizationTask(NAME, co, null, this, plot);
+ Iterator<OPTICSProjector<?>> ops = ResultUtil.filteredResults(result, OPTICSProjector.class);
+ for(OPTICSProjector<?> p : IterableUtil.fromIterator(ops)) {
+ final VisualizationTask task = new VisualizationTask(NAME, p, null, this);
task.put(VisualizationTask.META_LEVEL, VisualizationTask.LEVEL_INTERACTIVE);
- baseResult.getHierarchy().add(plot, task);
+ baseResult.getHierarchy().add(p, task);
}
}
@@ -394,13 +366,9 @@ public class OPTICSPlotSelectionVisualization<D extends Distance<D>> extends Abs
}
@Override
- public Visualization makeVisualizationOrThumbnail(VisualizationTask task) {
- return new ThumbnailVisualization(this, task, ThumbnailVisualization.ON_SELECTION);
- }
-
- @Override
- public Class<? extends Projection> getProjectionType() {
- return null;
+ public boolean allowThumbnails(@SuppressWarnings("unused") VisualizationTask task) {
+ // Don't use thumbnails
+ return false;
}
}
} \ No newline at end of file
diff --git a/src/de/lmu/ifi/dbs/elki/visualization/visualizers/optics/OPTICSPlotVisualizer.java b/src/de/lmu/ifi/dbs/elki/visualization/visualizers/optics/OPTICSPlotVisualizer.java
new file mode 100644
index 00000000..4af5d466
--- /dev/null
+++ b/src/de/lmu/ifi/dbs/elki/visualization/visualizers/optics/OPTICSPlotVisualizer.java
@@ -0,0 +1,146 @@
+package de.lmu.ifi.dbs.elki.visualization.visualizers.optics;
+
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
+
+import java.io.File;
+import java.io.IOException;
+import java.util.Iterator;
+
+import org.apache.batik.util.SVGConstants;
+import org.w3c.dom.Element;
+
+import de.lmu.ifi.dbs.elki.distance.distancevalue.Distance;
+import de.lmu.ifi.dbs.elki.distance.distancevalue.DoubleDistance;
+import de.lmu.ifi.dbs.elki.logging.LoggingUtil;
+import de.lmu.ifi.dbs.elki.result.HierarchicalResult;
+import de.lmu.ifi.dbs.elki.result.Result;
+import de.lmu.ifi.dbs.elki.result.ResultUtil;
+import de.lmu.ifi.dbs.elki.utilities.iterator.IterableUtil;
+import de.lmu.ifi.dbs.elki.visualization.VisualizationTask;
+import de.lmu.ifi.dbs.elki.visualization.css.CSSClassManager.CSSNamingConflict;
+import de.lmu.ifi.dbs.elki.visualization.opticsplot.OPTICSPlot;
+import de.lmu.ifi.dbs.elki.visualization.projector.OPTICSProjector;
+import de.lmu.ifi.dbs.elki.visualization.svg.SVGSimpleLinearAxis;
+import de.lmu.ifi.dbs.elki.visualization.svg.SVGUtil;
+import de.lmu.ifi.dbs.elki.visualization.visualizers.AbstractVisFactory;
+import de.lmu.ifi.dbs.elki.visualization.visualizers.Visualization;
+
+/**
+ * Visualize an OPTICS result by constructing an OPTICS plot for it.
+ *
+ * @author Erich Schubert
+ *
+ * @apiviz.has OPTICSPlot oneway - 1 visualizes
+ * @apiviz.has ClusterOrderResult oneway - 1 visualizes
+ *
+ * @param <D> Distance type
+ */
+public class OPTICSPlotVisualizer<D extends Distance<D>> extends AbstractOPTICSVisualization<D> {
+ /**
+ * Name for this visualizer.
+ */
+ private static final String NAME = "OPTICS Plot";
+
+ /**
+ * Constructor.
+ *
+ * @param task Visualization task
+ */
+ public OPTICSPlotVisualizer(VisualizationTask task) {
+ super(task);
+ }
+
+ @Override
+ protected void redraw() {
+ makeLayerElement();
+ // addCSSClasses();
+
+ OPTICSPlot<D> opticsplot = optics.getOPTICSPlot(context);
+ File imgfile = null;
+ try {
+ imgfile = opticsplot.getAsTempFile();
+ }
+ catch(IOException e) {
+ LoggingUtil.exception("Could not generate OPTICS plot.", e);
+ }
+
+ Element itag = svgp.svgElement(SVGConstants.SVG_IMAGE_TAG);
+ SVGUtil.setAtt(itag, SVGConstants.SVG_IMAGE_RENDERING_ATTRIBUTE, SVGConstants.SVG_OPTIMIZE_SPEED_VALUE);
+ SVGUtil.setAtt(itag, SVGConstants.SVG_X_ATTRIBUTE, 0);
+ SVGUtil.setAtt(itag, SVGConstants.SVG_Y_ATTRIBUTE, 0);
+ SVGUtil.setAtt(itag, SVGConstants.SVG_WIDTH_ATTRIBUTE, plotwidth);
+ SVGUtil.setAtt(itag, SVGConstants.SVG_HEIGHT_ATTRIBUTE, plotheight);
+ itag.setAttributeNS(SVGConstants.XLINK_NAMESPACE_URI, SVGConstants.XLINK_HREF_QNAME, imgfile.toURI().toString());
+
+ layer.appendChild(itag);
+
+ try {
+ SVGSimpleLinearAxis.drawAxis(svgp, layer, opticsplot.getScale(), 0, plotheight, 0, 0, true, false, context.getStyleLibrary());
+ SVGSimpleLinearAxis.drawAxis(svgp, layer, opticsplot.getScale(), plotwidth, plotheight, plotwidth, 0, true, true, context.getStyleLibrary());
+ }
+ catch(CSSNamingConflict e) {
+ LoggingUtil.exception("CSS naming conflict for axes on OPTICS plot", e);
+ }
+ }
+
+ /**
+ * Factory class for OPTICS plot.
+ *
+ * @author Erich Schubert
+ *
+ * @apiviz.stereotype factory
+ * @apiviz.uses OPTICSPlotVisualizer oneway - - «create»
+ */
+ public static class Factory extends AbstractVisFactory {
+ /**
+ * Constructor, adhering to
+ * {@link de.lmu.ifi.dbs.elki.utilities.optionhandling.Parameterizable}
+ */
+ public Factory() {
+ super();
+ }
+
+ @Override
+ public void processNewResult(HierarchicalResult baseResult, Result result) {
+ Iterator<OPTICSProjector<?>> ops = ResultUtil.filteredResults(result, OPTICSProjector.class);
+ for(OPTICSProjector<?> p : IterableUtil.fromIterator(ops)) {
+ // Add plots, attach visualizer
+ final VisualizationTask task = new VisualizationTask(NAME, p, null, this);
+ task.put(VisualizationTask.META_LEVEL, VisualizationTask.LEVEL_STATIC);
+ baseResult.getHierarchy().add(p, task);
+ }
+ }
+
+ @Override
+ public Visualization makeVisualization(VisualizationTask task) {
+ return new OPTICSPlotVisualizer<DoubleDistance>(task);
+ }
+
+ @Override
+ public boolean allowThumbnails(@SuppressWarnings("unused") VisualizationTask task) {
+ // Don't use thumbnails
+ return false;
+ }
+ }
+} \ No newline at end of file
diff --git a/src/de/lmu/ifi/dbs/elki/visualization/visualizers/visunproj/OPTICSSteepAreaVisualization.java b/src/de/lmu/ifi/dbs/elki/visualization/visualizers/optics/OPTICSSteepAreaVisualization.java
index eb2f2ba1..f9430145 100644
--- a/src/de/lmu/ifi/dbs/elki/visualization/visualizers/visunproj/OPTICSSteepAreaVisualization.java
+++ b/src/de/lmu/ifi/dbs/elki/visualization/visualizers/optics/OPTICSSteepAreaVisualization.java
@@ -1,29 +1,31 @@
-package de.lmu.ifi.dbs.elki.visualization.visualizers.visunproj;
-/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+package de.lmu.ifi.dbs.elki.visualization.visualizers.optics;
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.awt.Color;
-import java.util.Collection;
+import java.util.Iterator;
+import java.util.List;
import org.apache.batik.util.SVGConstants;
import org.w3c.dom.Element;
@@ -36,17 +38,19 @@ import de.lmu.ifi.dbs.elki.result.HierarchicalResult;
import de.lmu.ifi.dbs.elki.result.Result;
import de.lmu.ifi.dbs.elki.result.ResultUtil;
import de.lmu.ifi.dbs.elki.result.SelectionResult;
+import de.lmu.ifi.dbs.elki.result.optics.ClusterOrderEntry;
import de.lmu.ifi.dbs.elki.result.optics.ClusterOrderResult;
+import de.lmu.ifi.dbs.elki.utilities.iterator.IterableUtil;
+import de.lmu.ifi.dbs.elki.visualization.VisualizationTask;
import de.lmu.ifi.dbs.elki.visualization.css.CSSClass;
import de.lmu.ifi.dbs.elki.visualization.opticsplot.OPTICSDistanceAdapter;
import de.lmu.ifi.dbs.elki.visualization.opticsplot.OPTICSPlot;
-import de.lmu.ifi.dbs.elki.visualization.projections.Projection;
+import de.lmu.ifi.dbs.elki.visualization.projector.OPTICSProjector;
+import de.lmu.ifi.dbs.elki.visualization.scales.LinearScale;
import de.lmu.ifi.dbs.elki.visualization.style.StyleLibrary;
import de.lmu.ifi.dbs.elki.visualization.svg.SVGUtil;
import de.lmu.ifi.dbs.elki.visualization.visualizers.AbstractVisFactory;
-import de.lmu.ifi.dbs.elki.visualization.visualizers.AbstractVisualization;
import de.lmu.ifi.dbs.elki.visualization.visualizers.Visualization;
-import de.lmu.ifi.dbs.elki.visualization.visualizers.VisualizationTask;
/**
* Visualize the steep areas found in an OPTICS plot
@@ -56,7 +60,7 @@ import de.lmu.ifi.dbs.elki.visualization.visualizers.VisualizationTask;
* @apiviz.uses
* de.lmu.ifi.dbs.elki.algorithm.clustering.OPTICSXi.SteepAreaResult
*/
-public class OPTICSSteepAreaVisualization<D extends Distance<D>> extends AbstractVisualization {
+public class OPTICSSteepAreaVisualization<D extends Distance<D>> extends AbstractOPTICSVisualization<D> {
/**
* A short name characterizing this Visualizer.
*/
@@ -73,30 +77,18 @@ public class OPTICSSteepAreaVisualization<D extends Distance<D>> extends Abstrac
protected static final String CSS_STEEP_DOWN = "opticsSteepDown";
/**
- * Our cluster order
- */
- private ClusterOrderResult<D> co;
-
- /**
* Our clustering
*/
OPTICSXi.SteepAreaResult areas;
/**
- * The plot
- */
- private OPTICSPlot<D> opticsplot;
-
- /**
* Constructor.
*
* @param task Visualization task
*/
public OPTICSSteepAreaVisualization(VisualizationTask task) {
super(task);
- this.co = task.getResult();
- this.areas = findSteepAreaResult(this.co);
- this.opticsplot = OPTICSPlot.plotForClusterOrder(this.co, context);
+ this.areas = findSteepAreaResult(this.optics.getResult());
context.addResultListener(this);
incrementalRedraw();
}
@@ -118,30 +110,24 @@ public class OPTICSSteepAreaVisualization<D extends Distance<D>> extends Abstrac
@Override
protected void redraw() {
- final double scale = StyleLibrary.SCALE;
- final double sizex = scale;
- final double sizey = scale * task.getHeight() / task.getWidth();
- final double margin = context.getStyleLibrary().getSize(StyleLibrary.MARGIN);
- layer = SVGUtil.svgElement(svgp.getDocument(), SVGConstants.SVG_G_TAG);
- final String transform = SVGUtil.makeMarginTransform(task.getWidth(), task.getHeight(), sizex, sizey, margin);
- SVGUtil.setAtt(layer, SVGConstants.SVG_TRANSFORM_ATTRIBUTE, transform);
-
+ makeLayerElement();
addCSSClasses();
-
- final double plotwidth = scale;
- final double plotheight = scale / opticsplot.getRatio();
-
- OPTICSDistanceAdapter<D> adapter = opticsplot.getDistanceAdapter();
+
+ final OPTICSPlot<D> opticsplot = optics.getOPTICSPlot(context);
+ final List<ClusterOrderEntry<D>> co = getClusterOrder();
+ final OPTICSDistanceAdapter<D> adapter = opticsplot.getDistanceAdapter();
+ final LinearScale scale = opticsplot.getScale();
+
for(OPTICSXi.SteepArea area : areas) {
final int st = area.getStartIndex();
final int en = area.getEndIndex();
// Note: make sure we are using doubles!
- final double x1 = (st + .25) / this.co.getClusterOrder().size();
- final double x2 = (en + .75) / this.co.getClusterOrder().size();
- final double d1 = adapter.getDoubleForEntry(this.co.getClusterOrder().get(st));
- final double d2 = adapter.getDoubleForEntry(this.co.getClusterOrder().get(en));
- final double y1 = (!Double.isInfinite(d1) && !Double.isNaN(d1)) ? (1. - opticsplot.getScale().getScaled(d1)) : 0.;
- final double y2 = (!Double.isInfinite(d2) && !Double.isNaN(d2)) ? (1. - opticsplot.getScale().getScaled(d2)) : 0.;
+ final double x1 = (st + .25) / co.size();
+ final double x2 = (en + .75) / co.size();
+ final double d1 = adapter.getDoubleForEntry(co.get(st));
+ final double d2 = adapter.getDoubleForEntry(co.get(en));
+ final double y1 = (!Double.isInfinite(d1) && !Double.isNaN(d1)) ? (1. - scale.getScaled(d1)) : 0.;
+ final double y2 = (!Double.isInfinite(d2) && !Double.isNaN(d2)) ? (1. - scale.getScaled(d2)) : 0.;
Element e = svgp.svgLine(plotwidth * x1, plotheight * y1, plotwidth * x2, plotheight * y2);
if(area instanceof OPTICSXi.SteepDownArea) {
SVGUtil.addCSSClass(e, CSS_STEEP_DOWN);
@@ -184,7 +170,7 @@ public class OPTICSSteepAreaVisualization<D extends Distance<D>> extends Abstrac
@Override
public void resultChanged(Result current) {
- if(current instanceof SelectionResult || current == co || current == opticsplot) {
+ if(current instanceof SelectionResult) {
synchronizedRedraw();
return;
}
@@ -210,14 +196,14 @@ public class OPTICSSteepAreaVisualization<D extends Distance<D>> extends Abstrac
@Override
public void processNewResult(HierarchicalResult baseResult, Result result) {
- Collection<OPTICSPlot<?>> plots = ResultUtil.filterResults(result, OPTICSPlot.class);
- for(OPTICSPlot<?> plot : plots) {
- ClusterOrderResult<?> co = plot.getClusterOrder();
- final SteepAreaResult steep = findSteepAreaResult(co);
+ Iterator<OPTICSProjector<?>> ops = ResultUtil.filteredResults(result, OPTICSProjector.class);
+ for(OPTICSProjector<?> p : IterableUtil.fromIterator(ops)) {
+ final SteepAreaResult steep = findSteepAreaResult(p.getResult());
if(steep != null) {
- final VisualizationTask task = new VisualizationTask(NAME, co, null, this, plot);
+ final VisualizationTask task = new VisualizationTask(NAME, p, null, this);
task.put(VisualizationTask.META_LEVEL, VisualizationTask.LEVEL_INTERACTIVE);
task.put(VisualizationTask.META_VISIBLE_DEFAULT, false);
+ baseResult.getHierarchy().add(p, task);
baseResult.getHierarchy().add(steep, task);
}
}
@@ -233,10 +219,5 @@ public class OPTICSSteepAreaVisualization<D extends Distance<D>> extends Abstrac
// Don't use thumbnails
return false;
}
-
- @Override
- public Class<? extends Projection> getProjectionType() {
- return null;
- }
}
} \ No newline at end of file
diff --git a/src/de/lmu/ifi/dbs/elki/visualization/visualizers/optics/package-info.java b/src/de/lmu/ifi/dbs/elki/visualization/visualizers/optics/package-info.java
new file mode 100644
index 00000000..05b02142
--- /dev/null
+++ b/src/de/lmu/ifi/dbs/elki/visualization/visualizers/optics/package-info.java
@@ -0,0 +1,26 @@
+/**
+ * <p>Visualizers that do work on OPTICS plots</p>
+ */
+/*
+This file is part of ELKI:
+Environment for Developing KDD-Applications Supported by Index-Structures
+
+Copyright (C) 2011
+Ludwig-Maximilians-Universität München
+Lehr- und Forschungseinheit für Datenbanksysteme
+ELKI Development Team
+
+This program is free software: you can redistribute it and/or modify
+it under the terms of the GNU Affero General Public License as published by
+the Free Software Foundation, either version 3 of the License, or
+(at your option) any later version.
+
+This program is distributed in the hope that it will be useful,
+but WITHOUT ANY WARRANTY; without even the implied warranty of
+MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+GNU Affero General Public License for more details.
+
+You should have received a copy of the GNU Affero General Public License
+along with this program. If not, see <http://www.gnu.org/licenses/>.
+*/
+package de.lmu.ifi.dbs.elki.visualization.visualizers.optics; \ No newline at end of file
diff --git a/src/de/lmu/ifi/dbs/elki/visualization/visualizers/thumbs/ThumbnailThread.java b/src/de/lmu/ifi/dbs/elki/visualization/visualizers/thumbs/ThumbnailThread.java
index 133c798c..5d79a986 100644
--- a/src/de/lmu/ifi/dbs/elki/visualization/visualizers/thumbs/ThumbnailThread.java
+++ b/src/de/lmu/ifi/dbs/elki/visualization/visualizers/thumbs/ThumbnailThread.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.visualization.visualizers.thumbs;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.Queue;
import java.util.concurrent.ConcurrentLinkedQueue;
diff --git a/src/de/lmu/ifi/dbs/elki/visualization/visualizers/thumbs/ThumbnailVisualization.java b/src/de/lmu/ifi/dbs/elki/visualization/visualizers/thumbs/ThumbnailVisualization.java
index 0b29ea58..e352d599 100644
--- a/src/de/lmu/ifi/dbs/elki/visualization/visualizers/thumbs/ThumbnailVisualization.java
+++ b/src/de/lmu/ifi/dbs/elki/visualization/visualizers/thumbs/ThumbnailVisualization.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.visualization.visualizers.thumbs;
-/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.io.File;
@@ -33,12 +34,12 @@ import de.lmu.ifi.dbs.elki.logging.Logging;
import de.lmu.ifi.dbs.elki.logging.LoggingUtil;
import de.lmu.ifi.dbs.elki.result.Result;
import de.lmu.ifi.dbs.elki.result.SelectionResult;
+import de.lmu.ifi.dbs.elki.visualization.VisualizationTask;
import de.lmu.ifi.dbs.elki.visualization.svg.SVGPlot;
import de.lmu.ifi.dbs.elki.visualization.svg.SVGUtil;
import de.lmu.ifi.dbs.elki.visualization.visualizers.AbstractVisualization;
import de.lmu.ifi.dbs.elki.visualization.visualizers.VisFactory;
import de.lmu.ifi.dbs.elki.visualization.visualizers.Visualization;
-import de.lmu.ifi.dbs.elki.visualization.visualizers.VisualizationTask;
import de.lmu.ifi.dbs.elki.visualization.visualizers.events.ContextChangedEvent;
import de.lmu.ifi.dbs.elki.visualization.visualizers.events.ResizedEvent;
diff --git a/src/de/lmu/ifi/dbs/elki/visualization/visualizers/thumbs/Thumbnailer.java b/src/de/lmu/ifi/dbs/elki/visualization/visualizers/thumbs/Thumbnailer.java
index 334eeb6a..1909821a 100644
--- a/src/de/lmu/ifi/dbs/elki/visualization/visualizers/thumbs/Thumbnailer.java
+++ b/src/de/lmu/ifi/dbs/elki/visualization/visualizers/thumbs/Thumbnailer.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.visualization.visualizers.thumbs;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.io.File;
import java.io.IOException;
diff --git a/src/de/lmu/ifi/dbs/elki/visualization/visualizers/vis1d/P1DHistogramVisualizer.java b/src/de/lmu/ifi/dbs/elki/visualization/visualizers/vis1d/P1DHistogramVisualizer.java
index 39966319..7aee8108 100644
--- a/src/de/lmu/ifi/dbs/elki/visualization/visualizers/vis1d/P1DHistogramVisualizer.java
+++ b/src/de/lmu/ifi/dbs/elki/visualization/visualizers/vis1d/P1DHistogramVisualizer.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.visualization.visualizers.vis1d;
-/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.ArrayList;
import java.util.Iterator;
@@ -52,11 +53,12 @@ import de.lmu.ifi.dbs.elki.utilities.optionhandling.parameterization.Parameteriz
import de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters.Flag;
import de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters.IntParameter;
import de.lmu.ifi.dbs.elki.utilities.pairs.Pair;
+import de.lmu.ifi.dbs.elki.visualization.VisualizationTask;
import de.lmu.ifi.dbs.elki.visualization.colors.ColorLibrary;
import de.lmu.ifi.dbs.elki.visualization.css.CSSClass;
import de.lmu.ifi.dbs.elki.visualization.css.CSSClassManager.CSSNamingConflict;
import de.lmu.ifi.dbs.elki.visualization.projections.Projection;
-import de.lmu.ifi.dbs.elki.visualization.projections.Projection1D;
+import de.lmu.ifi.dbs.elki.visualization.projector.HistogramProjector;
import de.lmu.ifi.dbs.elki.visualization.scales.LinearScale;
import de.lmu.ifi.dbs.elki.visualization.style.StyleLibrary;
import de.lmu.ifi.dbs.elki.visualization.svg.SVGPath;
@@ -65,8 +67,6 @@ import de.lmu.ifi.dbs.elki.visualization.svg.SVGSimpleLinearAxis;
import de.lmu.ifi.dbs.elki.visualization.svg.SVGUtil;
import de.lmu.ifi.dbs.elki.visualization.visualizers.AbstractVisFactory;
import de.lmu.ifi.dbs.elki.visualization.visualizers.Visualization;
-import de.lmu.ifi.dbs.elki.visualization.visualizers.VisualizationTask;
-import de.lmu.ifi.dbs.elki.visualization.visualizers.VisualizerUtil;
/**
* Generates a SVG-Element containing a histogram representing the distribution
@@ -84,17 +84,17 @@ public class P1DHistogramVisualizer<NV extends NumberVector<NV, ?>> extends P1DV
/**
* Name for this visualizer.
*/
- private static final String NAME = "Projection Histograms";
+ private static final String NAME = "Histogram";
/**
- * Generic tag to indicate the type of element. Used in IDs, CSS-Classes etc.
+ * Name for this visualizer.
*/
- public static final String BIN = "bin";
+ private static final String CNAME = "Cluster Histograms";
/**
- * The clustering we use for colorization
+ * Generic tag to indicate the type of element. Used in IDs, CSS-Classes etc.
*/
- protected static final String KEY_CLUSTERING = "clustering";
+ public static final String BIN = "bin";
/**
* Internal storage of the curves flag.
@@ -128,7 +128,7 @@ public class P1DHistogramVisualizer<NV extends NumberVector<NV, ?>> extends P1DV
this.curves = curves;
this.bins = bins;
this.relation = task.getRelation();
- this.clustering = task.getGenerics(KEY_CLUSTERING, Clustering.class);
+ this.clustering = task.getResult();
}
@Override
@@ -377,37 +377,40 @@ public class P1DHistogramVisualizer<NV extends NumberVector<NV, ?>> extends P1DV
@Override
public void processNewResult(HierarchicalResult baseResult, Result result) {
- Iterator<Relation<? extends NumberVector<?, ?>>> rels = VisualizerUtil.iterateVectorFieldRepresentations(result);
- for(Relation<? extends NumberVector<?, ?>> rel : IterableUtil.fromIterator(rels)) {
- // register self
- final VisualizationTask task = new VisualizationTask(NAME, rel, rel, this, P1DHistogramVisualizer.class);
- task.put(VisualizationTask.META_LEVEL, VisualizationTask.LEVEL_DATA);
- baseResult.getHierarchy().add(rel, task);
- }
+ // Cluster histograms
ArrayList<Clustering<?>> clusterings = ResultUtil.filterResults(result, Clustering.class);
for(Clustering<?> c : clusterings) {
- Iterator<Relation<? extends NumberVector<?, ?>>> rels2 = VisualizerUtil.iterateVectorFieldRepresentations(baseResult);
- for(Relation<? extends NumberVector<?, ?>> rel2 : IterableUtil.fromIterator(rels2)) {
+ Iterator<HistogramProjector<?>> ps = ResultUtil.filteredResults(baseResult, HistogramProjector.class);
+ for(HistogramProjector<?> p : IterableUtil.fromIterator(ps)) {
// register self
- final VisualizationTask task = new VisualizationTask(NAME, rel2, rel2, this, P1DHistogramVisualizer.class);
+ final VisualizationTask task = new VisualizationTask(CNAME, c, p.getRelation(), this);
task.put(VisualizationTask.META_LEVEL, VisualizationTask.LEVEL_DATA);
- task.put(KEY_CLUSTERING, c);
baseResult.getHierarchy().add(c, task);
+ baseResult.getHierarchy().add(p, task);
+ }
+ }
+ // General data distribution
+ {
+ Iterator<HistogramProjector<?>> ps = ResultUtil.filteredResults(result, HistogramProjector.class);
+ for(HistogramProjector<?> p : IterableUtil.fromIterator(ps)) {
+ // register self
+ final VisualizationTask task = new VisualizationTask(NAME, null, p.getRelation(), this);
+ task.put(VisualizationTask.META_LEVEL, VisualizationTask.LEVEL_DATA);
+ if(clusterings.size() > 0) {
+ task.put(VisualizationTask.META_VISIBLE_DEFAULT, false);
+ }
+ // baseResult.getHierarchy().add(p.getRelation(), task);
+ baseResult.getHierarchy().add(p, task);
}
}
}
@Override
- public boolean allowThumbnails(@SuppressWarnings("unused") VisualizationTask task) {
+ public boolean allowThumbnails(VisualizationTask task) {
// Don't use thumbnails
return false;
}
- @Override
- public Class<? extends Projection> getProjectionType() {
- return Projection1D.class;
- }
-
/**
* Parameterization class.
*
diff --git a/src/de/lmu/ifi/dbs/elki/visualization/visualizers/vis1d/P1DVisualization.java b/src/de/lmu/ifi/dbs/elki/visualization/visualizers/vis1d/P1DVisualization.java
index b62afd5c..721d3432 100644
--- a/src/de/lmu/ifi/dbs/elki/visualization/visualizers/vis1d/P1DVisualization.java
+++ b/src/de/lmu/ifi/dbs/elki/visualization/visualizers/vis1d/P1DVisualization.java
@@ -1,30 +1,31 @@
package de.lmu.ifi.dbs.elki.visualization.visualizers.vis1d;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
+import de.lmu.ifi.dbs.elki.visualization.VisualizationTask;
import de.lmu.ifi.dbs.elki.visualization.projections.Projection1D;
import de.lmu.ifi.dbs.elki.visualization.visualizers.AbstractVisualization;
-import de.lmu.ifi.dbs.elki.visualization.visualizers.VisualizationTask;
/**
* One-dimensional projected visualization.
diff --git a/src/de/lmu/ifi/dbs/elki/visualization/visualizers/vis2d/TooltipVisualization.java b/src/de/lmu/ifi/dbs/elki/visualization/visualizers/vis2d/AbstractTooltipVisualization.java
index b490e836..9b8d19b6 100644
--- a/src/de/lmu/ifi/dbs/elki/visualization/visualizers/vis2d/TooltipVisualization.java
+++ b/src/de/lmu/ifi/dbs/elki/visualization/visualizers/vis2d/AbstractTooltipVisualization.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.visualization.visualizers.vis2d;
-/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import org.apache.batik.util.SVGConstants;
import org.w3c.dom.Element;
@@ -34,10 +35,10 @@ import de.lmu.ifi.dbs.elki.database.datastore.DataStoreEvent;
import de.lmu.ifi.dbs.elki.database.datastore.DataStoreListener;
import de.lmu.ifi.dbs.elki.database.ids.DBID;
import de.lmu.ifi.dbs.elki.logging.LoggingUtil;
+import de.lmu.ifi.dbs.elki.visualization.VisualizationTask;
import de.lmu.ifi.dbs.elki.visualization.style.StyleLibrary;
import de.lmu.ifi.dbs.elki.visualization.svg.SVGPlot;
import de.lmu.ifi.dbs.elki.visualization.svg.SVGUtil;
-import de.lmu.ifi.dbs.elki.visualization.visualizers.VisualizationTask;
/**
* General base class for a tooltip visualizer.
@@ -47,7 +48,7 @@ import de.lmu.ifi.dbs.elki.visualization.visualizers.VisualizationTask;
* @param <NV> Number Vector
*/
// TODO: can we improve performance by not adding as many hovers?
-public abstract class TooltipVisualization<NV extends NumberVector<NV, ?>> extends P2DVisualization<NV> implements DataStoreListener {
+public abstract class AbstractTooltipVisualization<NV extends NumberVector<NV, ?>> extends P2DVisualization<NV> implements DataStoreListener {
/**
* Generic tag to indicate the type of element. Used in IDs, CSS-Classes etc.
*/
@@ -68,7 +69,7 @@ public abstract class TooltipVisualization<NV extends NumberVector<NV, ?>> exten
*/
public static final String TOOLTIP_AREA = "tooltip_area";
- public TooltipVisualization(VisualizationTask task) {
+ public AbstractTooltipVisualization(VisualizationTask task) {
super(task);
context.addDataStoreListener(this);
}
@@ -92,8 +93,8 @@ public abstract class TooltipVisualization<NV extends NumberVector<NV, ?>> exten
}
};
- for(DBID id : rep.iterDBIDs()) {
- double[] v = proj.fastProjectDataToRenderSpace(rep.get(id));
+ for(DBID id : rel.iterDBIDs()) {
+ double[] v = proj.fastProjectDataToRenderSpace(rel.get(id));
Element tooltip = makeTooltip(id, v[0], v[1], dotsize);
SVGUtil.addCSSClass(tooltip, TOOLTIP_HIDDEN);
diff --git a/src/de/lmu/ifi/dbs/elki/visualization/visualizers/vis2d/AxisVisualization.java b/src/de/lmu/ifi/dbs/elki/visualization/visualizers/vis2d/AxisVisualization.java
index cd95fb67..4e927ace 100644
--- a/src/de/lmu/ifi/dbs/elki/visualization/visualizers/vis2d/AxisVisualization.java
+++ b/src/de/lmu/ifi/dbs/elki/visualization/visualizers/vis2d/AxisVisualization.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.visualization.visualizers.vis2d;
-/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.Iterator;
@@ -28,23 +29,22 @@ import org.apache.batik.util.SVGConstants;
import org.w3c.dom.Element;
import de.lmu.ifi.dbs.elki.data.NumberVector;
-import de.lmu.ifi.dbs.elki.database.relation.Relation;
import de.lmu.ifi.dbs.elki.math.linearalgebra.Vector;
import de.lmu.ifi.dbs.elki.result.HierarchicalResult;
import de.lmu.ifi.dbs.elki.result.Result;
+import de.lmu.ifi.dbs.elki.result.ResultUtil;
import de.lmu.ifi.dbs.elki.utilities.DatabaseUtil;
import de.lmu.ifi.dbs.elki.utilities.iterator.IterableUtil;
+import de.lmu.ifi.dbs.elki.visualization.VisualizationTask;
import de.lmu.ifi.dbs.elki.visualization.css.CSSClass;
import de.lmu.ifi.dbs.elki.visualization.css.CSSClassManager.CSSNamingConflict;
import de.lmu.ifi.dbs.elki.visualization.projections.Projection;
-import de.lmu.ifi.dbs.elki.visualization.projections.Projection2D;
+import de.lmu.ifi.dbs.elki.visualization.projector.ScatterPlotProjector;
import de.lmu.ifi.dbs.elki.visualization.style.StyleLibrary;
import de.lmu.ifi.dbs.elki.visualization.svg.SVGSimpleLinearAxis;
import de.lmu.ifi.dbs.elki.visualization.svg.SVGUtil;
import de.lmu.ifi.dbs.elki.visualization.visualizers.AbstractVisFactory;
import de.lmu.ifi.dbs.elki.visualization.visualizers.Visualization;
-import de.lmu.ifi.dbs.elki.visualization.visualizers.VisualizationTask;
-import de.lmu.ifi.dbs.elki.visualization.visualizers.VisualizerUtil;
/**
* Generates a SVG-Element containing axes, including labeling.
@@ -68,7 +68,7 @@ public class AxisVisualization<NV extends NumberVector<NV, ?>> extends P2DVisual
@Override
protected void redraw() {
- int dim = DatabaseUtil.dimensionality(rep);
+ int dim = DatabaseUtil.dimensionality(rel);
// origin
double[] orig = proj.fastProjectScaledToRender(new Vector(dim));
@@ -106,7 +106,7 @@ public class AxisVisualization<NV extends NumberVector<NV, ?>> extends P2DVisual
// TODO: move axis labeling into drawAxis function.
double offx = (righthand ? 1 : -1) * 0.02 * Projection.SCALE;
double offy = (righthand ? 1 : -1) * 0.02 * Projection.SCALE;
- Element label = svgp.svgText(ax[0] + offx, ax[1] + offy, "Dim. " + SVGUtil.fmt(d + 1));
+ Element label = svgp.svgText(ax[0] + offx, ax[1] + offy, DatabaseUtil.getColumnLabel(rel, d + 1));
SVGUtil.setAtt(label, SVGConstants.SVG_STYLE_ATTRIBUTE, alcls.inlineCSS());
SVGUtil.setAtt(label, SVGConstants.SVG_TEXT_ANCHOR_ATTRIBUTE, righthand ? SVGConstants.SVG_START_VALUE : SVGConstants.SVG_END_VALUE);
layer.appendChild(label);
@@ -149,11 +149,11 @@ public class AxisVisualization<NV extends NumberVector<NV, ?>> extends P2DVisual
@Override
public void processNewResult(HierarchicalResult baseResult, Result result) {
- Iterator<Relation<? extends NumberVector<?, ?>>> reps = VisualizerUtil.iterateVectorFieldRepresentations(result);
- for(Relation<? extends NumberVector<?, ?>> rel : IterableUtil.fromIterator(reps)) {
- final VisualizationTask task = new VisualizationTask(NAME, rel, rel, this, P2DVisualization.class);
+ Iterator<ScatterPlotProjector<?>> ps = ResultUtil.filteredResults(result, ScatterPlotProjector.class);
+ for(ScatterPlotProjector<?> p : IterableUtil.fromIterator(ps)) {
+ final VisualizationTask task = new VisualizationTask(NAME, p, p.getRelation(), this);
task.put(VisualizationTask.META_LEVEL, VisualizationTask.LEVEL_BACKGROUND);
- baseResult.getHierarchy().add(rel, task);
+ baseResult.getHierarchy().add(p, task);
}
}
@@ -162,10 +162,5 @@ public class AxisVisualization<NV extends NumberVector<NV, ?>> extends P2DVisual
// Don't use thumbnails
return false;
}
-
- @Override
- public Class<? extends Projection> getProjectionType() {
- return Projection2D.class;
- }
}
} \ No newline at end of file
diff --git a/src/de/lmu/ifi/dbs/elki/visualization/visualizers/vis2d/BubbleVisualization.java b/src/de/lmu/ifi/dbs/elki/visualization/visualizers/vis2d/BubbleVisualization.java
index 843dd39e..3d183a88 100644
--- a/src/de/lmu/ifi/dbs/elki/visualization/visualizers/vis2d/BubbleVisualization.java
+++ b/src/de/lmu/ifi/dbs/elki/visualization/visualizers/vis2d/BubbleVisualization.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.visualization.visualizers.vis2d;
-/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.Iterator;
import java.util.List;
@@ -35,7 +36,6 @@ import de.lmu.ifi.dbs.elki.data.model.Model;
import de.lmu.ifi.dbs.elki.database.datastore.DataStoreEvent;
import de.lmu.ifi.dbs.elki.database.datastore.DataStoreListener;
import de.lmu.ifi.dbs.elki.database.ids.DBID;
-import de.lmu.ifi.dbs.elki.database.relation.Relation;
import de.lmu.ifi.dbs.elki.result.HierarchicalResult;
import de.lmu.ifi.dbs.elki.result.Result;
import de.lmu.ifi.dbs.elki.result.ResultUtil;
@@ -49,17 +49,15 @@ import de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters.Flag;
import de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters.ObjectParameter;
import de.lmu.ifi.dbs.elki.utilities.scaling.ScalingFunction;
import de.lmu.ifi.dbs.elki.utilities.scaling.outlier.OutlierScalingFunction;
+import de.lmu.ifi.dbs.elki.visualization.VisualizationTask;
import de.lmu.ifi.dbs.elki.visualization.colors.ColorLibrary;
import de.lmu.ifi.dbs.elki.visualization.css.CSSClass;
-import de.lmu.ifi.dbs.elki.visualization.projections.Projection;
-import de.lmu.ifi.dbs.elki.visualization.projections.Projection2D;
+import de.lmu.ifi.dbs.elki.visualization.projector.ScatterPlotProjector;
import de.lmu.ifi.dbs.elki.visualization.style.StyleLibrary;
import de.lmu.ifi.dbs.elki.visualization.svg.SVGPlot;
import de.lmu.ifi.dbs.elki.visualization.svg.SVGUtil;
import de.lmu.ifi.dbs.elki.visualization.visualizers.AbstractVisFactory;
import de.lmu.ifi.dbs.elki.visualization.visualizers.Visualization;
-import de.lmu.ifi.dbs.elki.visualization.visualizers.VisualizationTask;
-import de.lmu.ifi.dbs.elki.visualization.visualizers.VisualizerUtil;
/**
* Generates a SVG-Element containing bubbles. A Bubble is a circle visualizing
@@ -133,7 +131,7 @@ public class BubbleVisualization<NV extends NumberVector<NV, ?>> extends P2DVisu
for(DBID objId : clus.getIDs()) {
final Double radius = getScaledForId(objId);
if(radius > 0.01) {
- final NV vec = rep.get(objId);
+ final NV vec = rel.get(objId);
if(vec != null) {
double[] v = proj.fastProjectDataToRenderSpace(vec);
Element circle = svgp.svgCircle(v[0], v[1], radius * bubble_size);
@@ -146,7 +144,7 @@ public class BubbleVisualization<NV extends NumberVector<NV, ?>> extends P2DVisu
}
@Override
- public void contentChanged(@SuppressWarnings("unused") DataStoreEvent e) {
+ public void contentChanged(DataStoreEvent e) {
synchronizedRedraw();
}
@@ -273,22 +271,30 @@ public class BubbleVisualization<NV extends NumberVector<NV, ?>> extends P2DVisu
@Override
public void processNewResult(HierarchicalResult baseResult, Result result) {
- Iterator<Relation<? extends NumberVector<?, ?>>> reps = VisualizerUtil.iterateVectorFieldRepresentations(baseResult);
- for(Relation<? extends NumberVector<?, ?>> rep : IterableUtil.fromIterator(reps)) {
- List<OutlierResult> ors = ResultUtil.filterResults(result, OutlierResult.class);
- for(OutlierResult o : ors) {
- final VisualizationTask task = new VisualizationTask(NAME, o, rep, this, P2DVisualization.class);
+ List<OutlierResult> ors = ResultUtil.filterResults(result, OutlierResult.class);
+ for(OutlierResult o : ors) {
+ Iterator<ScatterPlotProjector<?>> ps = ResultUtil.filteredResults(baseResult, ScatterPlotProjector.class);
+ boolean vis = true;
+ // Quick and dirty hack: hide if parent result is also an outlier result
+ // Since that probably is already visible and we're redundant.
+ for(Result r : o.getHierarchy().getParents(o)) {
+ if(r instanceof OutlierResult) {
+ vis = false;
+ break;
+ }
+ }
+ for(ScatterPlotProjector<?> p : IterableUtil.fromIterator(ps)) {
+ final VisualizationTask task = new VisualizationTask(NAME, o, p.getRelation(), this);
task.put(VisualizationTask.META_LEVEL, VisualizationTask.LEVEL_DATA);
+ if(!vis) {
+ task.put(VisualizationTask.META_VISIBLE_DEFAULT, false);
+ }
baseResult.getHierarchy().add(o, task);
+ baseResult.getHierarchy().add(p, task);
}
}
}
- @Override
- public Class<? extends Projection> getProjectionType() {
- return Projection2D.class;
- }
-
/**
* Parameterization class.
*
diff --git a/src/de/lmu/ifi/dbs/elki/visualization/visualizers/vis2d/ClusterConvexHullVisualization.java b/src/de/lmu/ifi/dbs/elki/visualization/visualizers/vis2d/ClusterConvexHullVisualization.java
index f310c4be..0b97986b 100644
--- a/src/de/lmu/ifi/dbs/elki/visualization/visualizers/vis2d/ClusterConvexHullVisualization.java
+++ b/src/de/lmu/ifi/dbs/elki/visualization/visualizers/vis2d/ClusterConvexHullVisualization.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.visualization.visualizers.vis2d;
-/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.Collection;
import java.util.Iterator;
@@ -36,7 +37,6 @@ import de.lmu.ifi.dbs.elki.data.spatial.Polygon;
import de.lmu.ifi.dbs.elki.data.spatial.SpatialUtil;
import de.lmu.ifi.dbs.elki.database.ids.DBID;
import de.lmu.ifi.dbs.elki.database.ids.DBIDs;
-import de.lmu.ifi.dbs.elki.database.relation.Relation;
import de.lmu.ifi.dbs.elki.math.ConvexHull2D;
import de.lmu.ifi.dbs.elki.math.DoubleMinMax;
import de.lmu.ifi.dbs.elki.math.linearalgebra.Vector;
@@ -45,18 +45,16 @@ import de.lmu.ifi.dbs.elki.result.Result;
import de.lmu.ifi.dbs.elki.result.ResultUtil;
import de.lmu.ifi.dbs.elki.utilities.iterator.IterableUtil;
import de.lmu.ifi.dbs.elki.utilities.pairs.Pair;
+import de.lmu.ifi.dbs.elki.visualization.VisualizationTask;
import de.lmu.ifi.dbs.elki.visualization.colors.ColorLibrary;
import de.lmu.ifi.dbs.elki.visualization.css.CSSClass;
-import de.lmu.ifi.dbs.elki.visualization.projections.Projection;
-import de.lmu.ifi.dbs.elki.visualization.projections.Projection2D;
+import de.lmu.ifi.dbs.elki.visualization.projector.ScatterPlotProjector;
import de.lmu.ifi.dbs.elki.visualization.style.StyleLibrary;
import de.lmu.ifi.dbs.elki.visualization.svg.SVGPath;
import de.lmu.ifi.dbs.elki.visualization.svg.SVGPlot;
import de.lmu.ifi.dbs.elki.visualization.svg.SVGUtil;
import de.lmu.ifi.dbs.elki.visualization.visualizers.AbstractVisFactory;
import de.lmu.ifi.dbs.elki.visualization.visualizers.Visualization;
-import de.lmu.ifi.dbs.elki.visualization.visualizers.VisualizationTask;
-import de.lmu.ifi.dbs.elki.visualization.visualizers.VisualizerUtil;
/**
* Visualizer for generating an SVG-Element containing the convex hull of each
@@ -119,7 +117,7 @@ public class ClusterConvexHullVisualization<NV extends NumberVector<NV, ?>> exte
ConvexHull2D hull = new ConvexHull2D();
for(DBID clpnum : ids) {
- double[] projP = proj.fastProjectDataToRenderSpace(rep.get(clpnum).getColumnVector());
+ double[] projP = proj.fastProjectDataToRenderSpace(rel.get(clpnum).getColumnVector());
hull.add(new Vector(projP));
}
Polygon chres = hull.getHull();
@@ -130,7 +128,7 @@ public class ClusterConvexHullVisualization<NV extends NumberVector<NV, ?>> exte
// Approximate area (using bounding box)
double hullarea = SpatialUtil.volume(chres);
final double relativeArea = (projarea - hullarea) / projarea;
- final double relativeSize = (double) ids.size() / rep.size();
+ final double relativeSize = (double) ids.size() / rel.size();
opacity = Math.sqrt(relativeSize * relativeArea);
hulls = path.makeElement(svgp);
@@ -192,22 +190,18 @@ public class ClusterConvexHullVisualization<NV extends NumberVector<NV, ?>> exte
@Override
public void processNewResult(HierarchicalResult baseResult, Result result) {
- Iterator<Relation<? extends NumberVector<?, ?>>> reps = VisualizerUtil.iterateVectorFieldRepresentations(baseResult);
- for(Relation<? extends NumberVector<?, ?>> rep : IterableUtil.fromIterator(reps)) {
- // Find clusterings we can visualize:
- Collection<Clustering<?>> clusterings = ResultUtil.filterResults(result, Clustering.class);
- for(Clustering<?> c : clusterings) {
- final VisualizationTask task = new VisualizationTask(NAME, c, rep, this, P2DVisualization.class);
+ // Find clusterings we can visualize:
+ Collection<Clustering<?>> clusterings = ResultUtil.filterResults(result, Clustering.class);
+ for(Clustering<?> c : clusterings) {
+ Iterator<ScatterPlotProjector<?>> ps = ResultUtil.filteredResults(baseResult, ScatterPlotProjector.class);
+ for(ScatterPlotProjector<?> p : IterableUtil.fromIterator(ps)) {
+ final VisualizationTask task = new VisualizationTask(NAME, c, p.getRelation(), this);
task.put(VisualizationTask.META_LEVEL, VisualizationTask.LEVEL_DATA - 1);
task.put(VisualizationTask.META_VISIBLE_DEFAULT, false);
baseResult.getHierarchy().add(c, task);
+ baseResult.getHierarchy().add(p, task);
}
}
}
-
- @Override
- public Class<? extends Projection> getProjectionType() {
- return Projection2D.class;
- }
}
} \ No newline at end of file
diff --git a/src/de/lmu/ifi/dbs/elki/visualization/visualizers/vis2d/ClusterMeanVisualization.java b/src/de/lmu/ifi/dbs/elki/visualization/visualizers/vis2d/ClusterMeanVisualization.java
index 0f00dca3..d1f1712d 100644
--- a/src/de/lmu/ifi/dbs/elki/visualization/visualizers/vis2d/ClusterMeanVisualization.java
+++ b/src/de/lmu/ifi/dbs/elki/visualization/visualizers/vis2d/ClusterMeanVisualization.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.visualization.visualizers.vis2d;
-/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.Collection;
import java.util.Iterator;
@@ -32,22 +33,19 @@ import de.lmu.ifi.dbs.elki.data.Cluster;
import de.lmu.ifi.dbs.elki.data.Clustering;
import de.lmu.ifi.dbs.elki.data.NumberVector;
import de.lmu.ifi.dbs.elki.data.model.MeanModel;
-import de.lmu.ifi.dbs.elki.database.relation.Relation;
import de.lmu.ifi.dbs.elki.result.HierarchicalResult;
import de.lmu.ifi.dbs.elki.result.Result;
import de.lmu.ifi.dbs.elki.result.ResultUtil;
import de.lmu.ifi.dbs.elki.utilities.iterator.IterableUtil;
+import de.lmu.ifi.dbs.elki.visualization.VisualizationTask;
import de.lmu.ifi.dbs.elki.visualization.css.CSSClass;
-import de.lmu.ifi.dbs.elki.visualization.projections.Projection;
-import de.lmu.ifi.dbs.elki.visualization.projections.Projection2D;
+import de.lmu.ifi.dbs.elki.visualization.projector.ScatterPlotProjector;
import de.lmu.ifi.dbs.elki.visualization.style.StyleLibrary;
import de.lmu.ifi.dbs.elki.visualization.style.marker.MarkerLibrary;
import de.lmu.ifi.dbs.elki.visualization.svg.SVGPlot;
import de.lmu.ifi.dbs.elki.visualization.svg.SVGUtil;
import de.lmu.ifi.dbs.elki.visualization.visualizers.AbstractVisFactory;
import de.lmu.ifi.dbs.elki.visualization.visualizers.Visualization;
-import de.lmu.ifi.dbs.elki.visualization.visualizers.VisualizationTask;
-import de.lmu.ifi.dbs.elki.visualization.visualizers.VisualizerUtil;
/**
* Visualize the mean of a KMeans-Clustering
@@ -158,18 +156,19 @@ public class ClusterMeanVisualization<NV extends NumberVector<NV, ?>> extends P2
@Override
public void processNewResult(HierarchicalResult baseResult, Result result) {
- Iterator<Relation<? extends NumberVector<?, ?>>> reps = VisualizerUtil.iterateVectorFieldRepresentations(baseResult);
- for(Relation<? extends NumberVector<?, ?>> rep : IterableUtil.fromIterator(reps)) {
- // Find clusterings we can visualize:
- Collection<Clustering<?>> clusterings = ResultUtil.filterResults(result, Clustering.class);
- for(Clustering<?> c : clusterings) {
- if(c.getAllClusters().size() > 0) {
- // Does the cluster have a model with cluster means?
- Clustering<MeanModel<NV>> mcls = findMeanModel(c);
- if(mcls != null) {
- final VisualizationTask task = new VisualizationTask(NAME, c, rep, this, P2DVisualization.class);
+ // Find clusterings we can visualize:
+ Collection<Clustering<?>> clusterings = ResultUtil.filterResults(result, Clustering.class);
+ for(Clustering<?> c : clusterings) {
+ if(c.getAllClusters().size() > 0) {
+ // Does the cluster have a model with cluster means?
+ Clustering<MeanModel<NV>> mcls = findMeanModel(c);
+ if(mcls != null) {
+ Iterator<ScatterPlotProjector<?>> ps = ResultUtil.filteredResults(baseResult, ScatterPlotProjector.class);
+ for(ScatterPlotProjector<?> p : IterableUtil.fromIterator(ps)) {
+ final VisualizationTask task = new VisualizationTask(NAME, c, p.getRelation(), this);
task.put(VisualizationTask.META_LEVEL, VisualizationTask.LEVEL_DATA + 1);
baseResult.getHierarchy().add(c, task);
+ baseResult.getHierarchy().add(p, task);
}
}
}
@@ -190,10 +189,5 @@ public class ClusterMeanVisualization<NV extends NumberVector<NV, ?>> extends P2
}
return null;
}
-
- @Override
- public Class<? extends Projection> getProjectionType() {
- return Projection2D.class;
- }
}
} \ No newline at end of file
diff --git a/src/de/lmu/ifi/dbs/elki/visualization/visualizers/vis2d/ClusterOrderVisualization.java b/src/de/lmu/ifi/dbs/elki/visualization/visualizers/vis2d/ClusterOrderVisualization.java
index 05a2d1f3..644083f9 100644
--- a/src/de/lmu/ifi/dbs/elki/visualization/visualizers/vis2d/ClusterOrderVisualization.java
+++ b/src/de/lmu/ifi/dbs/elki/visualization/visualizers/vis2d/ClusterOrderVisualization.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.visualization.visualizers.vis2d;
-/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.Collection;
import java.util.Iterator;
@@ -31,7 +32,6 @@ import de.lmu.ifi.dbs.elki.data.NumberVector;
import de.lmu.ifi.dbs.elki.database.datastore.DataStoreEvent;
import de.lmu.ifi.dbs.elki.database.datastore.DataStoreListener;
import de.lmu.ifi.dbs.elki.database.ids.DBID;
-import de.lmu.ifi.dbs.elki.database.relation.Relation;
import de.lmu.ifi.dbs.elki.distance.distancevalue.DoubleDistance;
import de.lmu.ifi.dbs.elki.result.HierarchicalResult;
import de.lmu.ifi.dbs.elki.result.Result;
@@ -39,15 +39,13 @@ import de.lmu.ifi.dbs.elki.result.ResultUtil;
import de.lmu.ifi.dbs.elki.result.optics.ClusterOrderEntry;
import de.lmu.ifi.dbs.elki.result.optics.ClusterOrderResult;
import de.lmu.ifi.dbs.elki.utilities.iterator.IterableUtil;
+import de.lmu.ifi.dbs.elki.visualization.VisualizationTask;
import de.lmu.ifi.dbs.elki.visualization.css.CSSClass;
-import de.lmu.ifi.dbs.elki.visualization.projections.Projection;
-import de.lmu.ifi.dbs.elki.visualization.projections.Projection2D;
+import de.lmu.ifi.dbs.elki.visualization.projector.ScatterPlotProjector;
import de.lmu.ifi.dbs.elki.visualization.style.StyleLibrary;
import de.lmu.ifi.dbs.elki.visualization.svg.SVGUtil;
import de.lmu.ifi.dbs.elki.visualization.visualizers.AbstractVisFactory;
import de.lmu.ifi.dbs.elki.visualization.visualizers.Visualization;
-import de.lmu.ifi.dbs.elki.visualization.visualizers.VisualizationTask;
-import de.lmu.ifi.dbs.elki.visualization.visualizers.VisualizerUtil;
/**
* Cluster order visualizer.
@@ -99,8 +97,8 @@ public class ClusterOrderVisualization<NV extends NumberVector<NV, ?>> extends P
if(thisId == null || prevId == null) {
continue;
}
- double[] thisVec = proj.fastProjectDataToRenderSpace(rep.get(thisId));
- double[] prevVec = proj.fastProjectDataToRenderSpace(rep.get(prevId));
+ double[] thisVec = proj.fastProjectDataToRenderSpace(rel.get(thisId));
+ double[] prevVec = proj.fastProjectDataToRenderSpace(rel.get(prevId));
Element arrow = svgp.svgLine(prevVec[0], prevVec[1], thisVec[0], thisVec[1]);
SVGUtil.setCSSClass(arrow, cls.getName());
@@ -140,21 +138,17 @@ public class ClusterOrderVisualization<NV extends NumberVector<NV, ?>> extends P
@Override
public void processNewResult(HierarchicalResult baseResult, Result result) {
- Iterator<Relation<? extends NumberVector<?, ?>>> reps = VisualizerUtil.iterateVectorFieldRepresentations(baseResult);
- for(Relation<? extends NumberVector<?, ?>> rep : IterableUtil.fromIterator(reps)) {
- Collection<ClusterOrderResult<DoubleDistance>> cos = ResultUtil.filterResults(result, ClusterOrderResult.class);
- for(ClusterOrderResult<DoubleDistance> co : cos) {
- final VisualizationTask task = new VisualizationTask(NAME, co, rep, this, P2DVisualization.class);
+ Collection<ClusterOrderResult<DoubleDistance>> cos = ResultUtil.filterResults(result, ClusterOrderResult.class);
+ for(ClusterOrderResult<DoubleDistance> co : cos) {
+ Iterator<ScatterPlotProjector<?>> ps = ResultUtil.filteredResults(baseResult, ScatterPlotProjector.class);
+ for(ScatterPlotProjector<?> p : IterableUtil.fromIterator(ps)) {
+ final VisualizationTask task = new VisualizationTask(NAME, co, p.getRelation(), this);
task.put(VisualizationTask.META_VISIBLE_DEFAULT, false);
task.put(VisualizationTask.META_LEVEL, VisualizationTask.LEVEL_DATA - 1);
baseResult.getHierarchy().add(co, task);
+ baseResult.getHierarchy().add(p, task);
}
}
}
-
- @Override
- public Class<? extends Projection> getProjectionType() {
- return Projection2D.class;
- }
}
} \ No newline at end of file
diff --git a/src/de/lmu/ifi/dbs/elki/visualization/visualizers/vis2d/ClusteringVisualization.java b/src/de/lmu/ifi/dbs/elki/visualization/visualizers/vis2d/ClusteringVisualization.java
index 7f487418..58f71ef3 100644
--- a/src/de/lmu/ifi/dbs/elki/visualization/visualizers/vis2d/ClusteringVisualization.java
+++ b/src/de/lmu/ifi/dbs/elki/visualization/visualizers/vis2d/ClusteringVisualization.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.visualization.visualizers.vis2d;
-/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.Collection;
import java.util.Iterator;
@@ -32,20 +33,17 @@ import de.lmu.ifi.dbs.elki.data.model.Model;
import de.lmu.ifi.dbs.elki.database.datastore.DataStoreEvent;
import de.lmu.ifi.dbs.elki.database.datastore.DataStoreListener;
import de.lmu.ifi.dbs.elki.database.ids.DBID;
-import de.lmu.ifi.dbs.elki.database.relation.Relation;
import de.lmu.ifi.dbs.elki.result.HierarchicalResult;
import de.lmu.ifi.dbs.elki.result.Result;
import de.lmu.ifi.dbs.elki.result.ResultUtil;
import de.lmu.ifi.dbs.elki.utilities.exceptions.ObjectNotFoundException;
import de.lmu.ifi.dbs.elki.utilities.iterator.IterableUtil;
-import de.lmu.ifi.dbs.elki.visualization.projections.Projection;
-import de.lmu.ifi.dbs.elki.visualization.projections.Projection2D;
+import de.lmu.ifi.dbs.elki.visualization.VisualizationTask;
+import de.lmu.ifi.dbs.elki.visualization.projector.ScatterPlotProjector;
import de.lmu.ifi.dbs.elki.visualization.style.StyleLibrary;
import de.lmu.ifi.dbs.elki.visualization.style.marker.MarkerLibrary;
import de.lmu.ifi.dbs.elki.visualization.visualizers.AbstractVisFactory;
import de.lmu.ifi.dbs.elki.visualization.visualizers.Visualization;
-import de.lmu.ifi.dbs.elki.visualization.visualizers.VisualizationTask;
-import de.lmu.ifi.dbs.elki.visualization.visualizers.VisualizerUtil;
/**
* Visualize a clustering using different markers for different clusters.
@@ -91,7 +89,7 @@ public class ClusteringVisualization<NV extends NumberVector<NV, ?>> extends P2D
Cluster<?> clus = ci.next();
for(DBID objId : clus.getIDs()) {
try {
- final NV vec = rep.get(objId);
+ final NV vec = rel.get(objId);
double[] v = proj.fastProjectDataToRenderSpace(vec);
ml.useMarker(svgp, layer, v[0], v[1], cnum, marker_size);
}
@@ -138,23 +136,19 @@ public class ClusteringVisualization<NV extends NumberVector<NV, ?>> extends P2D
@Override
public void processNewResult(HierarchicalResult baseResult, Result result) {
- Iterator<Relation<? extends NumberVector<?, ?>>> reps = VisualizerUtil.iterateVectorFieldRepresentations(baseResult);
- for(Relation<? extends NumberVector<?, ?>> rep : IterableUtil.fromIterator(reps)) {
- // Find clusterings we can visualize:
- Collection<Clustering<?>> clusterings = ResultUtil.filterResults(result, Clustering.class);
- for(Clustering<?> c : clusterings) {
- if(c.getAllClusters().size() > 0) {
- final VisualizationTask task = new VisualizationTask(NAME, c, rep, this, P2DVisualization.class);
+ // Find clusterings we can visualize:
+ Collection<Clustering<?>> clusterings = ResultUtil.filterResults(result, Clustering.class);
+ for(Clustering<?> c : clusterings) {
+ if(c.getAllClusters().size() > 0) {
+ Iterator<ScatterPlotProjector<?>> ps = ResultUtil.filteredResults(baseResult, ScatterPlotProjector.class);
+ for(ScatterPlotProjector<?> p : IterableUtil.fromIterator(ps)) {
+ final VisualizationTask task = new VisualizationTask(NAME, c, p.getRelation(), this);
task.put(VisualizationTask.META_LEVEL, VisualizationTask.LEVEL_DATA);
baseResult.getHierarchy().add(c, task);
+ baseResult.getHierarchy().add(p, task);
}
}
}
}
-
- @Override
- public Class<? extends Projection> getProjectionType() {
- return Projection2D.class;
- }
}
} \ No newline at end of file
diff --git a/src/de/lmu/ifi/dbs/elki/visualization/visualizers/vis2d/DotVisualization.java b/src/de/lmu/ifi/dbs/elki/visualization/visualizers/vis2d/DotVisualization.java
index 69f6a381..3cfd5a48 100644
--- a/src/de/lmu/ifi/dbs/elki/visualization/visualizers/vis2d/DotVisualization.java
+++ b/src/de/lmu/ifi/dbs/elki/visualization/visualizers/vis2d/DotVisualization.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.visualization.visualizers.vis2d;
-/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.ArrayList;
import java.util.Iterator;
@@ -32,20 +33,17 @@ import de.lmu.ifi.dbs.elki.data.NumberVector;
import de.lmu.ifi.dbs.elki.database.datastore.DataStoreEvent;
import de.lmu.ifi.dbs.elki.database.datastore.DataStoreListener;
import de.lmu.ifi.dbs.elki.database.ids.DBID;
-import de.lmu.ifi.dbs.elki.database.relation.Relation;
import de.lmu.ifi.dbs.elki.result.HierarchicalResult;
import de.lmu.ifi.dbs.elki.result.Result;
import de.lmu.ifi.dbs.elki.result.ResultUtil;
import de.lmu.ifi.dbs.elki.utilities.exceptions.ObjectNotFoundException;
import de.lmu.ifi.dbs.elki.utilities.iterator.IterableUtil;
-import de.lmu.ifi.dbs.elki.visualization.projections.Projection;
-import de.lmu.ifi.dbs.elki.visualization.projections.Projection2D;
+import de.lmu.ifi.dbs.elki.visualization.VisualizationTask;
+import de.lmu.ifi.dbs.elki.visualization.projector.ScatterPlotProjector;
import de.lmu.ifi.dbs.elki.visualization.style.StyleLibrary;
import de.lmu.ifi.dbs.elki.visualization.svg.SVGUtil;
import de.lmu.ifi.dbs.elki.visualization.visualizers.AbstractVisFactory;
import de.lmu.ifi.dbs.elki.visualization.visualizers.Visualization;
-import de.lmu.ifi.dbs.elki.visualization.visualizers.VisualizationTask;
-import de.lmu.ifi.dbs.elki.visualization.visualizers.VisualizerUtil;
/**
* Generates a SVG-Element containing "dots" as markers representing the
@@ -89,9 +87,9 @@ public class DotVisualization<NV extends NumberVector<NV, ?>> extends P2DVisuali
public void redraw() {
// draw data
double dot_size = context.getStyleLibrary().getSize(StyleLibrary.DOTPLOT);
- for(DBID id : rep.iterDBIDs()) {
+ for(DBID id : rel.iterDBIDs()) {
try {
- double[] v = proj.fastProjectDataToRenderSpace(rep.get(id));
+ double[] v = proj.fastProjectDataToRenderSpace(rel.get(id));
Element dot = svgp.svgCircle(v[0], v[1], dot_size);
SVGUtil.addCSSClass(dot, MARKER);
layer.appendChild(dot);
@@ -104,7 +102,7 @@ public class DotVisualization<NV extends NumberVector<NV, ?>> extends P2DVisuali
}
@Override
- public void contentChanged(@SuppressWarnings("unused") DataStoreEvent e) {
+ public void contentChanged(DataStoreEvent e) {
synchronizedRedraw();
}
@@ -137,20 +135,16 @@ public class DotVisualization<NV extends NumberVector<NV, ?>> extends P2DVisuali
ArrayList<Clustering<?>> cs = ResultUtil.filterResults(result, Clustering.class);
boolean hasClustering = (cs.size() > 0);
- Iterator<Relation<? extends NumberVector<?, ?>>> reps = VisualizerUtil.iterateVectorFieldRepresentations(result);
- for(Relation<? extends NumberVector<?, ?>> rep : IterableUtil.fromIterator(reps)) {
- final VisualizationTask task = new VisualizationTask(NAME, rep, rep, this, P2DVisualization.class);
+ Iterator<ScatterPlotProjector<?>> ps = ResultUtil.filteredResults(result, ScatterPlotProjector.class);
+ for(ScatterPlotProjector<?> p : IterableUtil.fromIterator(ps)) {
+ final VisualizationTask task = new VisualizationTask(NAME, p.getRelation(), p.getRelation(), this);
task.put(VisualizationTask.META_LEVEL, VisualizationTask.LEVEL_DATA + 1);
if(hasClustering) {
task.put(VisualizationTask.META_VISIBLE_DEFAULT, false);
}
- baseResult.getHierarchy().add(rep, task);
+ // baseResult.getHierarchy().add(p.getRelation(), task);
+ baseResult.getHierarchy().add(p, task);
}
}
-
- @Override
- public Class<? extends Projection> getProjectionType() {
- return Projection2D.class;
- }
}
} \ No newline at end of file
diff --git a/src/de/lmu/ifi/dbs/elki/visualization/visualizers/vis2d/EMClusterVisualization.java b/src/de/lmu/ifi/dbs/elki/visualization/visualizers/vis2d/EMClusterVisualization.java
index ee022c8b..f62ff1a6 100644
--- a/src/de/lmu/ifi/dbs/elki/visualization/visualizers/vis2d/EMClusterVisualization.java
+++ b/src/de/lmu/ifi/dbs/elki/visualization/visualizers/vis2d/EMClusterVisualization.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.visualization.visualizers.vis2d;
-/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.ArrayList;
import java.util.Collection;
@@ -37,7 +38,6 @@ import de.lmu.ifi.dbs.elki.data.model.MeanModel;
import de.lmu.ifi.dbs.elki.data.model.Model;
import de.lmu.ifi.dbs.elki.data.spatial.Polygon;
import de.lmu.ifi.dbs.elki.database.ids.DBIDs;
-import de.lmu.ifi.dbs.elki.database.relation.Relation;
import de.lmu.ifi.dbs.elki.logging.LoggingUtil;
import de.lmu.ifi.dbs.elki.math.ConvexHull2D;
import de.lmu.ifi.dbs.elki.math.MathUtil;
@@ -52,18 +52,16 @@ import de.lmu.ifi.dbs.elki.result.ResultUtil;
import de.lmu.ifi.dbs.elki.utilities.ClassGenericsUtil;
import de.lmu.ifi.dbs.elki.utilities.iterator.IterableUtil;
import de.lmu.ifi.dbs.elki.utilities.optionhandling.parameterization.EmptyParameterization;
+import de.lmu.ifi.dbs.elki.visualization.VisualizationTask;
import de.lmu.ifi.dbs.elki.visualization.colors.ColorLibrary;
import de.lmu.ifi.dbs.elki.visualization.css.CSSClass;
-import de.lmu.ifi.dbs.elki.visualization.projections.Projection;
-import de.lmu.ifi.dbs.elki.visualization.projections.Projection2D;
+import de.lmu.ifi.dbs.elki.visualization.projector.ScatterPlotProjector;
import de.lmu.ifi.dbs.elki.visualization.style.StyleLibrary;
import de.lmu.ifi.dbs.elki.visualization.svg.SVGHyperSphere;
import de.lmu.ifi.dbs.elki.visualization.svg.SVGPath;
import de.lmu.ifi.dbs.elki.visualization.svg.SVGPlot;
import de.lmu.ifi.dbs.elki.visualization.svg.SVGUtil;
import de.lmu.ifi.dbs.elki.visualization.visualizers.AbstractVisFactory;
-import de.lmu.ifi.dbs.elki.visualization.visualizers.VisualizationTask;
-import de.lmu.ifi.dbs.elki.visualization.visualizers.VisualizerUtil;
/**
* Visualizer for generating SVG-Elements containing ellipses for first, second
@@ -184,7 +182,7 @@ public class EMClusterVisualization<NV extends NumberVector<NV, ?>> extends P2DV
SVGUtil.addCSSClass(ellipse, EMBORDER + cnum);
if(opacStyle == 1) {
CSSClass cls = new CSSClass(null, "temp");
- double s = (i > 1 && i <= sigma.length) ? sigma[i - 1] : 0.0;
+ double s = (i >= 1 && i <= sigma.length) ? sigma[i - 1] : 0.0;
cls.setStatement(SVGConstants.CSS_FILL_OPACITY_PROPERTY, s);
SVGUtil.setAtt(ellipse, SVGConstants.SVG_STYLE_ATTRIBUTE, cls.inlineCSS());
}
@@ -206,7 +204,7 @@ public class EMClusterVisualization<NV extends NumberVector<NV, ?>> extends P2DV
SVGUtil.addCSSClass(ellipse, EMBORDER + cnum);
if(opacStyle == 1) {
CSSClass cls = new CSSClass(null, "temp");
- double s = (i > 1 && i <= sigma.length) ? sigma[i - 1] : 0.0;
+ double s = (i >= 1 && i <= sigma.length) ? sigma[i - 1] : 0.0;
cls.setStatement(SVGConstants.CSS_FILL_OPACITY_PROPERTY, s);
SVGUtil.setAtt(ellipse, SVGConstants.SVG_STYLE_ATTRIBUTE, cls.inlineCSS());
}
@@ -309,7 +307,7 @@ public class EMClusterVisualization<NV extends NumberVector<NV, ?>> extends P2DV
SVGUtil.addCSSClass(ellipse, EMBORDER + cnum);
if(opacStyle == 1) {
CSSClass cls = new CSSClass(null, "temp");
- double s = (i > 1 && i <= sigma.length) ? sigma[i - 1] : 0.0;
+ double s = (i >= 1 && i <= sigma.length) ? sigma[i - 1] : 0.0;
cls.setStatement(SVGConstants.CSS_FILL_OPACITY_PROPERTY, s);
SVGUtil.setAtt(ellipse, SVGConstants.SVG_STYLE_ATTRIBUTE, cls.inlineCSS());
}
@@ -435,18 +433,19 @@ public class EMClusterVisualization<NV extends NumberVector<NV, ?>> extends P2DV
@Override
public void processNewResult(HierarchicalResult baseResult, Result result) {
- Iterator<Relation<? extends NumberVector<?, ?>>> reps = VisualizerUtil.iterateVectorFieldRepresentations(baseResult);
- for(Relation<? extends NumberVector<?, ?>> rep : IterableUtil.fromIterator(reps)) {
- // Find clusterings we can visualize:
- Collection<Clustering<?>> clusterings = ResultUtil.filterResults(result, Clustering.class);
- for(Clustering<?> c : clusterings) {
- if(c.getAllClusters().size() > 0) {
- // Does the cluster have a model with cluster means?
- Clustering<MeanModel<NV>> mcls = findMeanModel(c);
- if(mcls != null) {
- final VisualizationTask task = new VisualizationTask(NAME, c, rep, this, P2DVisualization.class);
+ // Find clusterings we can visualize:
+ Collection<Clustering<?>> clusterings = ResultUtil.filterResults(result, Clustering.class);
+ for(Clustering<?> c : clusterings) {
+ if(c.getAllClusters().size() > 0) {
+ // Does the cluster have a model with cluster means?
+ Clustering<MeanModel<NV>> mcls = findMeanModel(c);
+ if(mcls != null) {
+ Iterator<ScatterPlotProjector<?>> ps = ResultUtil.filteredResults(baseResult, ScatterPlotProjector.class);
+ for(ScatterPlotProjector<?> p : IterableUtil.fromIterator(ps)) {
+ final VisualizationTask task = new VisualizationTask(NAME, c, p.getRelation(), this);
task.put(VisualizationTask.META_LEVEL, VisualizationTask.LEVEL_DATA + 3);
baseResult.getHierarchy().add(c, task);
+ baseResult.getHierarchy().add(p, task);
}
}
}
@@ -468,10 +467,5 @@ public class EMClusterVisualization<NV extends NumberVector<NV, ?>> extends P2DV
}
return null;
}
-
- @Override
- public Class<? extends Projection> getProjectionType() {
- return Projection2D.class;
- }
}
}
diff --git a/src/de/lmu/ifi/dbs/elki/visualization/visualizers/vis2d/MoveObjectsToolVisualization.java b/src/de/lmu/ifi/dbs/elki/visualization/visualizers/vis2d/MoveObjectsToolVisualization.java
index 2a77c656..66b442f9 100644
--- a/src/de/lmu/ifi/dbs/elki/visualization/visualizers/vis2d/MoveObjectsToolVisualization.java
+++ b/src/de/lmu/ifi/dbs/elki/visualization/visualizers/vis2d/MoveObjectsToolVisualization.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.visualization.visualizers.vis2d;
-/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.Iterator;
@@ -32,25 +33,22 @@ import org.w3c.dom.svg.SVGPoint;
import de.lmu.ifi.dbs.elki.data.NumberVector;
import de.lmu.ifi.dbs.elki.database.UpdatableDatabase;
import de.lmu.ifi.dbs.elki.database.ids.DBIDs;
-import de.lmu.ifi.dbs.elki.database.relation.Relation;
import de.lmu.ifi.dbs.elki.math.linearalgebra.Vector;
import de.lmu.ifi.dbs.elki.result.HierarchicalResult;
import de.lmu.ifi.dbs.elki.result.Result;
import de.lmu.ifi.dbs.elki.result.ResultUtil;
import de.lmu.ifi.dbs.elki.utilities.exceptions.AbortException;
import de.lmu.ifi.dbs.elki.utilities.iterator.IterableUtil;
+import de.lmu.ifi.dbs.elki.visualization.VisualizationTask;
import de.lmu.ifi.dbs.elki.visualization.batikutil.DragableArea;
import de.lmu.ifi.dbs.elki.visualization.batikutil.DragableArea.DragListener;
import de.lmu.ifi.dbs.elki.visualization.css.CSSClass;
-import de.lmu.ifi.dbs.elki.visualization.projections.Projection;
-import de.lmu.ifi.dbs.elki.visualization.projections.Projection2D;
+import de.lmu.ifi.dbs.elki.visualization.projector.ScatterPlotProjector;
import de.lmu.ifi.dbs.elki.visualization.style.StyleLibrary;
import de.lmu.ifi.dbs.elki.visualization.svg.SVGPlot;
import de.lmu.ifi.dbs.elki.visualization.svg.SVGUtil;
import de.lmu.ifi.dbs.elki.visualization.visualizers.AbstractVisFactory;
import de.lmu.ifi.dbs.elki.visualization.visualizers.Visualization;
-import de.lmu.ifi.dbs.elki.visualization.visualizers.VisualizationTask;
-import de.lmu.ifi.dbs.elki.visualization.visualizers.VisualizerUtil;
import de.lmu.ifi.dbs.elki.visualization.visualizers.events.ContextChangedEvent;
/**
@@ -220,24 +218,20 @@ public class MoveObjectsToolVisualization<NV extends NumberVector<NV, ?>> extend
@Override
public void processNewResult(HierarchicalResult baseResult, Result result) {
- Iterator<UpdatableDatabase> dbs = ResultUtil.filteredResults(baseResult, UpdatableDatabase.class);
+ Iterator<UpdatableDatabase> dbs = ResultUtil.filteredResults(result, UpdatableDatabase.class);
if(!dbs.hasNext()) {
return;
}
- Iterator<Relation<? extends NumberVector<?, ?>>> reps = VisualizerUtil.iterateVectorFieldRepresentations(result);
- for(Relation<? extends NumberVector<?, ?>> rep : IterableUtil.fromIterator(reps)) {
- final VisualizationTask task = new VisualizationTask(NAME, rep, rep, this, P2DVisualization.class);
+ Iterator<ScatterPlotProjector<?>> ps = ResultUtil.filteredResults(baseResult, ScatterPlotProjector.class);
+ for(ScatterPlotProjector<?> p : IterableUtil.fromIterator(ps)) {
+ final VisualizationTask task = new VisualizationTask(NAME, p.getRelation(), p.getRelation(), this);
task.put(VisualizationTask.META_LEVEL, VisualizationTask.LEVEL_INTERACTIVE);
task.put(VisualizationTask.META_TOOL, true);
task.put(VisualizationTask.META_NOTHUMB, true);
task.put(VisualizationTask.META_NOEXPORT, true);
- baseResult.getHierarchy().add(rep, task);
+ // baseResult.getHierarchy().add(p.getRelation(), task);
+ baseResult.getHierarchy().add(p, task);
}
}
-
- @Override
- public Class<? extends Projection> getProjectionType() {
- return Projection2D.class;
- }
}
} \ No newline at end of file
diff --git a/src/de/lmu/ifi/dbs/elki/visualization/visualizers/vis2d/P2DVisualization.java b/src/de/lmu/ifi/dbs/elki/visualization/visualizers/vis2d/P2DVisualization.java
index d0ae559a..b6b4b418 100644
--- a/src/de/lmu/ifi/dbs/elki/visualization/visualizers/vis2d/P2DVisualization.java
+++ b/src/de/lmu/ifi/dbs/elki/visualization/visualizers/vis2d/P2DVisualization.java
@@ -1,38 +1,39 @@
package de.lmu.ifi.dbs.elki.visualization.visualizers.vis2d;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import org.apache.batik.util.SVGConstants;
import org.w3c.dom.Element;
import de.lmu.ifi.dbs.elki.data.NumberVector;
import de.lmu.ifi.dbs.elki.database.relation.Relation;
+import de.lmu.ifi.dbs.elki.visualization.VisualizationTask;
import de.lmu.ifi.dbs.elki.visualization.projections.Projection2D;
import de.lmu.ifi.dbs.elki.visualization.style.StyleLibrary;
import de.lmu.ifi.dbs.elki.visualization.svg.SVGPlot;
import de.lmu.ifi.dbs.elki.visualization.svg.SVGUtil;
import de.lmu.ifi.dbs.elki.visualization.visualizers.AbstractVisualization;
-import de.lmu.ifi.dbs.elki.visualization.visualizers.VisualizationTask;
/**
* Default class to handle 2D projected visualizations.
@@ -51,7 +52,7 @@ public abstract class P2DVisualization<NV extends NumberVector<?, ?>> extends Ab
/**
* The representation we visualize
*/
- final protected Relation<NV> rep;
+ final protected Relation<NV> rel;
/**
* Constructor.
@@ -61,7 +62,7 @@ public abstract class P2DVisualization<NV extends NumberVector<?, ?>> extends Ab
public P2DVisualization(VisualizationTask task) {
super(task);
this.proj = task.getProj();
- this.rep = task.getRelation();
+ this.rel = task.getRelation();
final double margin = context.getStyleLibrary().getSize(StyleLibrary.MARGIN);
this.layer = setupCanvas(svgp, proj, margin, task.getWidth(), task.getHeight());
}
diff --git a/src/de/lmu/ifi/dbs/elki/visualization/visualizers/vis2d/PolygonVisualization.java b/src/de/lmu/ifi/dbs/elki/visualization/visualizers/vis2d/PolygonVisualization.java
index 026a7729..b0f18666 100644
--- a/src/de/lmu/ifi/dbs/elki/visualization/visualizers/vis2d/PolygonVisualization.java
+++ b/src/de/lmu/ifi/dbs/elki/visualization/visualizers/vis2d/PolygonVisualization.java
@@ -1,28 +1,30 @@
package de.lmu.ifi.dbs.elki.visualization.visualizers.vis2d;
-/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.ArrayList;
+import java.util.Iterator;
import org.apache.batik.util.SVGConstants;
import org.w3c.dom.Element;
@@ -40,16 +42,18 @@ import de.lmu.ifi.dbs.elki.math.linearalgebra.Vector;
import de.lmu.ifi.dbs.elki.result.HierarchicalResult;
import de.lmu.ifi.dbs.elki.result.Result;
import de.lmu.ifi.dbs.elki.result.ResultUtil;
+import de.lmu.ifi.dbs.elki.utilities.DatabaseUtil;
import de.lmu.ifi.dbs.elki.utilities.exceptions.ObjectNotFoundException;
+import de.lmu.ifi.dbs.elki.utilities.iterator.IterableUtil;
+import de.lmu.ifi.dbs.elki.visualization.VisualizationTask;
import de.lmu.ifi.dbs.elki.visualization.css.CSSClass;
-import de.lmu.ifi.dbs.elki.visualization.projections.Projection;
import de.lmu.ifi.dbs.elki.visualization.projections.Projection2D;
+import de.lmu.ifi.dbs.elki.visualization.projector.ScatterPlotProjector;
import de.lmu.ifi.dbs.elki.visualization.style.StyleLibrary;
import de.lmu.ifi.dbs.elki.visualization.svg.SVGPath;
import de.lmu.ifi.dbs.elki.visualization.svg.SVGUtil;
import de.lmu.ifi.dbs.elki.visualization.visualizers.AbstractVisFactory;
import de.lmu.ifi.dbs.elki.visualization.visualizers.Visualization;
-import de.lmu.ifi.dbs.elki.visualization.visualizers.VisualizationTask;
/**
* Renders PolygonsObject in the data set.
@@ -67,7 +71,7 @@ public class PolygonVisualization<V extends NumberVector<?, ?>> extends P2DVisua
/**
* Generic tag to indicate the type of element. Used in IDs, CSS-Classes etc.
*/
- public static final String MARKER = "polys";
+ public static final String POLYS = "polys";
/**
* The current projection
@@ -87,7 +91,7 @@ public class PolygonVisualization<V extends NumberVector<?, ?>> extends P2DVisua
public PolygonVisualization(VisualizationTask task) {
super(task);
this.proj = task.getProj();
- this.rep = task.getRelation();
+ this.rep = task.getResult(); // Note: relation was used for projection
context.addDataStoreListener(this);
incrementalRedraw();
}
@@ -100,9 +104,11 @@ public class PolygonVisualization<V extends NumberVector<?, ?>> extends P2DVisua
@Override
public void redraw() {
- CSSClass css = new CSSClass(svgp, MARKER);
- css.setStatement(SVGConstants.CSS_STROKE_WIDTH_PROPERTY, context.getStyleLibrary().getLineWidth(StyleLibrary.PLOT));
- css.setStatement(SVGConstants.CSS_STROKE_PROPERTY, context.getStyleLibrary().getColor(StyleLibrary.PLOT));
+ CSSClass css = new CSSClass(svgp, POLYS);
+ // TODO: separate fill and line colors?
+ css.setStatement(SVGConstants.CSS_STROKE_WIDTH_PROPERTY, context.getStyleLibrary().getLineWidth(StyleLibrary.POLYGONS));
+ css.setStatement(SVGConstants.CSS_STROKE_PROPERTY, context.getStyleLibrary().getColor(StyleLibrary.POLYGONS));
+ css.setStatement(SVGConstants.CSS_FILL_PROPERTY, SVGConstants.CSS_NONE_VALUE);
svgp.addCSSClassOrLogError(css);
svgp.updateStyleElement();
@@ -129,7 +135,7 @@ public class PolygonVisualization<V extends NumberVector<?, ?>> extends P2DVisua
path.drawTo(f[0], f[1]);
}
Element e = path.makeElement(svgp);
- SVGUtil.addCSSClass(e, MARKER);
+ SVGUtil.addCSSClass(e, POLYS);
layer.appendChild(e);
}
catch(ObjectNotFoundException e) {
@@ -139,7 +145,7 @@ public class PolygonVisualization<V extends NumberVector<?, ?>> extends P2DVisua
}
@Override
- public void contentChanged(@SuppressWarnings("unused") DataStoreEvent e) {
+ public void contentChanged(DataStoreEvent e) {
synchronizedRedraw();
}
@@ -169,16 +175,18 @@ public class PolygonVisualization<V extends NumberVector<?, ?>> extends P2DVisua
ArrayList<Relation<?>> results = ResultUtil.filterResults(result, Relation.class);
for(Relation<?> rel : results) {
if(TypeUtil.POLYGON_TYPE.isAssignableFromType(rel.getDataTypeInformation())) {
- final VisualizationTask task = new VisualizationTask(NAME, rel, rel, this, P2DVisualization.class);
- task.put(VisualizationTask.META_LEVEL, VisualizationTask.LEVEL_DATA);
- baseResult.getHierarchy().add(rel, task);
+ // Assume that a 2d projector is using the same coordinates as the polygons.
+ Iterator<ScatterPlotProjector<?>> ps = ResultUtil.filteredResults(baseResult, ScatterPlotProjector.class);
+ for(ScatterPlotProjector<?> p : IterableUtil.fromIterator(ps)) {
+ if(DatabaseUtil.dimensionality(p.getRelation()) == 2) {
+ final VisualizationTask task = new VisualizationTask(NAME, rel, p.getRelation(), this);
+ task.put(VisualizationTask.META_LEVEL, VisualizationTask.LEVEL_DATA - 10);
+ baseResult.getHierarchy().add(rel, task);
+ baseResult.getHierarchy().add(p, task);
+ }
+ }
}
}
}
-
- @Override
- public Class<? extends Projection> getProjectionType() {
- return Projection2D.class;
- }
}
} \ No newline at end of file
diff --git a/src/de/lmu/ifi/dbs/elki/visualization/visualizers/vis2d/ReferencePointsVisualization.java b/src/de/lmu/ifi/dbs/elki/visualization/visualizers/vis2d/ReferencePointsVisualization.java
index e61154d3..df1aac20 100644
--- a/src/de/lmu/ifi/dbs/elki/visualization/visualizers/vis2d/ReferencePointsVisualization.java
+++ b/src/de/lmu/ifi/dbs/elki/visualization/visualizers/vis2d/ReferencePointsVisualization.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.visualization.visualizers.vis2d;
-/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.Collection;
import java.util.Iterator;
@@ -29,22 +30,19 @@ import org.apache.batik.util.SVGConstants;
import org.w3c.dom.Element;
import de.lmu.ifi.dbs.elki.data.NumberVector;
-import de.lmu.ifi.dbs.elki.database.relation.Relation;
import de.lmu.ifi.dbs.elki.result.HierarchicalResult;
import de.lmu.ifi.dbs.elki.result.ReferencePointsResult;
import de.lmu.ifi.dbs.elki.result.Result;
import de.lmu.ifi.dbs.elki.result.ResultUtil;
import de.lmu.ifi.dbs.elki.utilities.iterator.IterableUtil;
+import de.lmu.ifi.dbs.elki.visualization.VisualizationTask;
import de.lmu.ifi.dbs.elki.visualization.css.CSSClass;
-import de.lmu.ifi.dbs.elki.visualization.projections.Projection;
-import de.lmu.ifi.dbs.elki.visualization.projections.Projection2D;
+import de.lmu.ifi.dbs.elki.visualization.projector.ScatterPlotProjector;
import de.lmu.ifi.dbs.elki.visualization.style.StyleLibrary;
import de.lmu.ifi.dbs.elki.visualization.svg.SVGPlot;
import de.lmu.ifi.dbs.elki.visualization.svg.SVGUtil;
import de.lmu.ifi.dbs.elki.visualization.visualizers.AbstractVisFactory;
import de.lmu.ifi.dbs.elki.visualization.visualizers.Visualization;
-import de.lmu.ifi.dbs.elki.visualization.visualizers.VisualizationTask;
-import de.lmu.ifi.dbs.elki.visualization.visualizers.VisualizerUtil;
/**
* The actual visualization instance, for a single projection
@@ -128,13 +126,14 @@ public class ReferencePointsVisualization<NV extends NumberVector<NV, ?>> extend
@Override
public void processNewResult(HierarchicalResult baseResult, Result result) {
- Iterator<Relation<? extends NumberVector<?, ?>>> reps = VisualizerUtil.iterateVectorFieldRepresentations(baseResult);
- for(Relation<? extends NumberVector<?, ?>> rep : IterableUtil.fromIterator(reps)) {
- Collection<ReferencePointsResult<NV>> rps = ResultUtil.filterResults(result, ReferencePointsResult.class);
- for(ReferencePointsResult<NV> rp : rps) {
- final VisualizationTask task = new VisualizationTask(NAME, rp, rep, this, P2DVisualization.class);
+ Collection<ReferencePointsResult<NV>> rps = ResultUtil.filterResults(result, ReferencePointsResult.class);
+ for(ReferencePointsResult<NV> rp : rps) {
+ Iterator<ScatterPlotProjector<?>> ps = ResultUtil.filteredResults(baseResult, ScatterPlotProjector.class);
+ for(ScatterPlotProjector<?> p : IterableUtil.fromIterator(ps)) {
+ final VisualizationTask task = new VisualizationTask(NAME, rp, p.getRelation(), this);
task.put(VisualizationTask.META_LEVEL, VisualizationTask.LEVEL_DATA);
baseResult.getHierarchy().add(rp, task);
+ baseResult.getHierarchy().add(p, task);
}
}
}
@@ -143,10 +142,5 @@ public class ReferencePointsVisualization<NV extends NumberVector<NV, ?>> extend
public Visualization makeVisualization(VisualizationTask task) {
return new ReferencePointsVisualization<NV>(task);
}
-
- @Override
- public Class<? extends Projection> getProjectionType() {
- return Projection2D.class;
- }
}
} \ No newline at end of file
diff --git a/src/de/lmu/ifi/dbs/elki/visualization/visualizers/vis2d/SelectionConvexHullVisualization.java b/src/de/lmu/ifi/dbs/elki/visualization/visualizers/vis2d/SelectionConvexHullVisualization.java
index 5ce3575c..9e70ffd8 100644
--- a/src/de/lmu/ifi/dbs/elki/visualization/visualizers/vis2d/SelectionConvexHullVisualization.java
+++ b/src/de/lmu/ifi/dbs/elki/visualization/visualizers/vis2d/SelectionConvexHullVisualization.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.visualization.visualizers.vis2d;
-/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.ArrayList;
import java.util.Iterator;
@@ -34,7 +35,6 @@ import de.lmu.ifi.dbs.elki.database.datastore.DataStoreEvent;
import de.lmu.ifi.dbs.elki.database.datastore.DataStoreListener;
import de.lmu.ifi.dbs.elki.database.ids.DBID;
import de.lmu.ifi.dbs.elki.database.ids.DBIDs;
-import de.lmu.ifi.dbs.elki.database.relation.Relation;
import de.lmu.ifi.dbs.elki.math.ConvexHull2D;
import de.lmu.ifi.dbs.elki.math.linearalgebra.Vector;
import de.lmu.ifi.dbs.elki.result.DBIDSelection;
@@ -44,17 +44,15 @@ import de.lmu.ifi.dbs.elki.result.ResultUtil;
import de.lmu.ifi.dbs.elki.result.SelectionResult;
import de.lmu.ifi.dbs.elki.utilities.exceptions.ObjectNotFoundException;
import de.lmu.ifi.dbs.elki.utilities.iterator.IterableUtil;
+import de.lmu.ifi.dbs.elki.visualization.VisualizationTask;
import de.lmu.ifi.dbs.elki.visualization.css.CSSClass;
-import de.lmu.ifi.dbs.elki.visualization.projections.Projection;
-import de.lmu.ifi.dbs.elki.visualization.projections.Projection2D;
+import de.lmu.ifi.dbs.elki.visualization.projector.ScatterPlotProjector;
import de.lmu.ifi.dbs.elki.visualization.style.StyleLibrary;
import de.lmu.ifi.dbs.elki.visualization.svg.SVGPath;
import de.lmu.ifi.dbs.elki.visualization.svg.SVGPlot;
import de.lmu.ifi.dbs.elki.visualization.svg.SVGUtil;
import de.lmu.ifi.dbs.elki.visualization.visualizers.AbstractVisFactory;
import de.lmu.ifi.dbs.elki.visualization.visualizers.Visualization;
-import de.lmu.ifi.dbs.elki.visualization.visualizers.VisualizationTask;
-import de.lmu.ifi.dbs.elki.visualization.visualizers.VisualizerUtil;
import de.lmu.ifi.dbs.elki.visualization.visualizers.events.ContextChangeListener;
import de.lmu.ifi.dbs.elki.visualization.visualizers.thumbs.ThumbnailVisualization;
@@ -103,7 +101,7 @@ public class SelectionConvexHullVisualization<NV extends NumberVector<NV, ?>> ex
ConvexHull2D hull = new ConvexHull2D();
for(DBID i : selection) {
try {
- hull.add(new Vector(proj.fastProjectDataToRenderSpace(rep.get(i))));
+ hull.add(new Vector(proj.fastProjectDataToRenderSpace(rel.get(i))));
}
catch(ObjectNotFoundException e) {
// ignore
@@ -177,20 +175,16 @@ public class SelectionConvexHullVisualization<NV extends NumberVector<NV, ?>> ex
@Override
public void processNewResult(HierarchicalResult baseResult, Result result) {
- Iterator<Relation<? extends NumberVector<?, ?>>> reps = VisualizerUtil.iterateVectorFieldRepresentations(baseResult);
- for(Relation<? extends NumberVector<?, ?>> rep : IterableUtil.fromIterator(reps)) {
- final ArrayList<SelectionResult> selectionResults = ResultUtil.filterResults(result, SelectionResult.class);
- for(SelectionResult selres : selectionResults) {
- final VisualizationTask task = new VisualizationTask(NAME, selres, rep, this, P2DVisualization.class);
+ final ArrayList<SelectionResult> selectionResults = ResultUtil.filterResults(result, SelectionResult.class);
+ for(SelectionResult selres : selectionResults) {
+ Iterator<ScatterPlotProjector<?>> ps = ResultUtil.filteredResults(baseResult, ScatterPlotProjector.class);
+ for(ScatterPlotProjector<?> p : IterableUtil.fromIterator(ps)) {
+ final VisualizationTask task = new VisualizationTask(NAME, selres, p.getRelation(), this);
task.put(VisualizationTask.META_LEVEL, VisualizationTask.LEVEL_DATA - 2);
baseResult.getHierarchy().add(selres, task);
+ baseResult.getHierarchy().add(p, task);
}
}
}
-
- @Override
- public Class<? extends Projection> getProjectionType() {
- return Projection2D.class;
- }
}
} \ No newline at end of file
diff --git a/src/de/lmu/ifi/dbs/elki/visualization/visualizers/vis2d/SelectionCubeVisualization.java b/src/de/lmu/ifi/dbs/elki/visualization/visualizers/vis2d/SelectionCubeVisualization.java
index a425dc16..7f6d9c04 100644
--- a/src/de/lmu/ifi/dbs/elki/visualization/visualizers/vis2d/SelectionCubeVisualization.java
+++ b/src/de/lmu/ifi/dbs/elki/visualization/visualizers/vis2d/SelectionCubeVisualization.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.visualization.visualizers.vis2d;
-/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.ArrayList;
import java.util.Iterator;
@@ -29,7 +30,6 @@ import org.apache.batik.util.SVGConstants;
import org.w3c.dom.Element;
import de.lmu.ifi.dbs.elki.data.NumberVector;
-import de.lmu.ifi.dbs.elki.database.relation.Relation;
import de.lmu.ifi.dbs.elki.math.linearalgebra.Vector;
import de.lmu.ifi.dbs.elki.result.DBIDSelection;
import de.lmu.ifi.dbs.elki.result.HierarchicalResult;
@@ -44,17 +44,16 @@ import de.lmu.ifi.dbs.elki.utilities.optionhandling.OptionID;
import de.lmu.ifi.dbs.elki.utilities.optionhandling.parameterization.Parameterization;
import de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters.Flag;
import de.lmu.ifi.dbs.elki.utilities.pairs.DoubleDoublePair;
+import de.lmu.ifi.dbs.elki.visualization.VisualizationTask;
import de.lmu.ifi.dbs.elki.visualization.css.CSSClass;
-import de.lmu.ifi.dbs.elki.visualization.projections.Projection;
import de.lmu.ifi.dbs.elki.visualization.projections.Projection2D;
+import de.lmu.ifi.dbs.elki.visualization.projector.ScatterPlotProjector;
import de.lmu.ifi.dbs.elki.visualization.style.StyleLibrary;
import de.lmu.ifi.dbs.elki.visualization.svg.SVGHyperCube;
import de.lmu.ifi.dbs.elki.visualization.svg.SVGPlot;
import de.lmu.ifi.dbs.elki.visualization.svg.SVGUtil;
import de.lmu.ifi.dbs.elki.visualization.visualizers.AbstractVisFactory;
import de.lmu.ifi.dbs.elki.visualization.visualizers.Visualization;
-import de.lmu.ifi.dbs.elki.visualization.visualizers.VisualizationTask;
-import de.lmu.ifi.dbs.elki.visualization.visualizers.VisualizerUtil;
import de.lmu.ifi.dbs.elki.visualization.visualizers.events.ContextChangeListener;
import de.lmu.ifi.dbs.elki.visualization.visualizers.thumbs.ThumbnailVisualization;
@@ -157,7 +156,7 @@ public class SelectionCubeVisualization<NV extends NumberVector<NV, ?>> extends
DBIDSelection selContext = context.getSelection();
if(selContext instanceof RangeSelection) {
DoubleDoublePair[] ranges = ((RangeSelection) selContext).getRanges();
- int dim = DatabaseUtil.dimensionality(rep);
+ int dim = DatabaseUtil.dimensionality(rel);
double[] min = new double[dim];
double[] max = new double[dim];
@@ -235,13 +234,14 @@ public class SelectionCubeVisualization<NV extends NumberVector<NV, ?>> extends
@Override
public void processNewResult(HierarchicalResult baseResult, Result result) {
- Iterator<Relation<? extends NumberVector<?, ?>>> reps = VisualizerUtil.iterateVectorFieldRepresentations(baseResult);
- for(Relation<? extends NumberVector<?, ?>> rep : IterableUtil.fromIterator(reps)) {
- final ArrayList<SelectionResult> selectionResults = ResultUtil.filterResults(result, SelectionResult.class);
- for(SelectionResult selres : selectionResults) {
- final VisualizationTask task = new VisualizationTask(NAME, selres, rep, this, P2DVisualization.class);
+ final ArrayList<SelectionResult> selectionResults = ResultUtil.filterResults(result, SelectionResult.class);
+ for(SelectionResult selres : selectionResults) {
+ Iterator<ScatterPlotProjector<?>> ps = ResultUtil.filteredResults(baseResult, ScatterPlotProjector.class);
+ for(ScatterPlotProjector<?> p : IterableUtil.fromIterator(ps)) {
+ final VisualizationTask task = new VisualizationTask(NAME, selres, p.getRelation(), this);
task.put(VisualizationTask.META_LEVEL, VisualizationTask.LEVEL_DATA - 2);
baseResult.getHierarchy().add(selres, task);
+ baseResult.getHierarchy().add(p, task);
}
}
}
@@ -251,11 +251,6 @@ public class SelectionCubeVisualization<NV extends NumberVector<NV, ?>> extends
return new ThumbnailVisualization(this, task, ThumbnailVisualization.ON_DATA | ThumbnailVisualization.ON_SELECTION);
}
- @Override
- public Class<? extends Projection> getProjectionType() {
- return Projection2D.class;
- }
-
/**
* Parameterization class.
*
diff --git a/src/de/lmu/ifi/dbs/elki/visualization/visualizers/vis2d/SelectionDotVisualization.java b/src/de/lmu/ifi/dbs/elki/visualization/visualizers/vis2d/SelectionDotVisualization.java
index cfa2daad..283eafaa 100644
--- a/src/de/lmu/ifi/dbs/elki/visualization/visualizers/vis2d/SelectionDotVisualization.java
+++ b/src/de/lmu/ifi/dbs/elki/visualization/visualizers/vis2d/SelectionDotVisualization.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.visualization.visualizers.vis2d;
-/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.ArrayList;
import java.util.Iterator;
@@ -33,7 +34,6 @@ import de.lmu.ifi.dbs.elki.database.datastore.DataStoreEvent;
import de.lmu.ifi.dbs.elki.database.datastore.DataStoreListener;
import de.lmu.ifi.dbs.elki.database.ids.DBID;
import de.lmu.ifi.dbs.elki.database.ids.DBIDs;
-import de.lmu.ifi.dbs.elki.database.relation.Relation;
import de.lmu.ifi.dbs.elki.result.DBIDSelection;
import de.lmu.ifi.dbs.elki.result.HierarchicalResult;
import de.lmu.ifi.dbs.elki.result.Result;
@@ -41,16 +41,14 @@ import de.lmu.ifi.dbs.elki.result.ResultUtil;
import de.lmu.ifi.dbs.elki.result.SelectionResult;
import de.lmu.ifi.dbs.elki.utilities.exceptions.ObjectNotFoundException;
import de.lmu.ifi.dbs.elki.utilities.iterator.IterableUtil;
+import de.lmu.ifi.dbs.elki.visualization.VisualizationTask;
import de.lmu.ifi.dbs.elki.visualization.css.CSSClass;
-import de.lmu.ifi.dbs.elki.visualization.projections.Projection;
-import de.lmu.ifi.dbs.elki.visualization.projections.Projection2D;
+import de.lmu.ifi.dbs.elki.visualization.projector.ScatterPlotProjector;
import de.lmu.ifi.dbs.elki.visualization.style.StyleLibrary;
import de.lmu.ifi.dbs.elki.visualization.svg.SVGPlot;
import de.lmu.ifi.dbs.elki.visualization.svg.SVGUtil;
import de.lmu.ifi.dbs.elki.visualization.visualizers.AbstractVisFactory;
import de.lmu.ifi.dbs.elki.visualization.visualizers.Visualization;
-import de.lmu.ifi.dbs.elki.visualization.visualizers.VisualizationTask;
-import de.lmu.ifi.dbs.elki.visualization.visualizers.VisualizerUtil;
import de.lmu.ifi.dbs.elki.visualization.visualizers.events.ContextChangeListener;
import de.lmu.ifi.dbs.elki.visualization.visualizers.thumbs.ThumbnailVisualization;
@@ -104,7 +102,7 @@ public class SelectionDotVisualization<NV extends NumberVector<NV, ?>> extends P
DBIDs selection = selContext.getSelectedIds();
for(DBID i : selection) {
try {
- double[] v = proj.fastProjectDataToRenderSpace(rep.get(i));
+ double[] v = proj.fastProjectDataToRenderSpace(rel.get(i));
Element dot = svgp.svgCircle(v[0], v[1], size);
SVGUtil.addCSSClass(dot, MARKER);
layer.appendChild(dot);
@@ -168,20 +166,16 @@ public class SelectionDotVisualization<NV extends NumberVector<NV, ?>> extends P
@Override
public void processNewResult(HierarchicalResult baseResult, Result result) {
- Iterator<Relation<? extends NumberVector<?, ?>>> reps = VisualizerUtil.iterateVectorFieldRepresentations(baseResult);
- for(Relation<? extends NumberVector<?, ?>> rep : IterableUtil.fromIterator(reps)) {
- final ArrayList<SelectionResult> selectionResults = ResultUtil.filterResults(result, SelectionResult.class);
- for(SelectionResult selres : selectionResults) {
- final VisualizationTask task = new VisualizationTask(NAME, selres, rep, this, P2DVisualization.class);
+ final ArrayList<SelectionResult> selectionResults = ResultUtil.filterResults(result, SelectionResult.class);
+ for(SelectionResult selres : selectionResults) {
+ Iterator<ScatterPlotProjector<?>> ps = ResultUtil.filteredResults(baseResult, ScatterPlotProjector.class);
+ for(ScatterPlotProjector<?> p : IterableUtil.fromIterator(ps)) {
+ final VisualizationTask task = new VisualizationTask(NAME, selres, p.getRelation(), this);
task.put(VisualizationTask.META_LEVEL, VisualizationTask.LEVEL_DATA - 1);
baseResult.getHierarchy().add(selres, task);
+ baseResult.getHierarchy().add(p, task);
}
}
}
-
- @Override
- public Class<? extends Projection> getProjectionType() {
- return Projection2D.class;
- }
}
} \ No newline at end of file
diff --git a/src/de/lmu/ifi/dbs/elki/visualization/visualizers/vis2d/SelectionToolCubeVisualization.java b/src/de/lmu/ifi/dbs/elki/visualization/visualizers/vis2d/SelectionToolCubeVisualization.java
index c5f1b3f9..fc2af9da 100644
--- a/src/de/lmu/ifi/dbs/elki/visualization/visualizers/vis2d/SelectionToolCubeVisualization.java
+++ b/src/de/lmu/ifi/dbs/elki/visualization/visualizers/vis2d/SelectionToolCubeVisualization.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.visualization.visualizers.vis2d;
-/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.ArrayList;
import java.util.BitSet;
@@ -35,7 +36,6 @@ import de.lmu.ifi.dbs.elki.data.NumberVector;
import de.lmu.ifi.dbs.elki.database.ids.DBID;
import de.lmu.ifi.dbs.elki.database.ids.DBIDUtil;
import de.lmu.ifi.dbs.elki.database.ids.ModifiableDBIDs;
-import de.lmu.ifi.dbs.elki.database.relation.Relation;
import de.lmu.ifi.dbs.elki.logging.Logging;
import de.lmu.ifi.dbs.elki.math.linearalgebra.Vector;
import de.lmu.ifi.dbs.elki.result.DBIDSelection;
@@ -47,17 +47,16 @@ import de.lmu.ifi.dbs.elki.result.SelectionResult;
import de.lmu.ifi.dbs.elki.utilities.DatabaseUtil;
import de.lmu.ifi.dbs.elki.utilities.iterator.IterableUtil;
import de.lmu.ifi.dbs.elki.utilities.pairs.DoubleDoublePair;
+import de.lmu.ifi.dbs.elki.visualization.VisualizationTask;
import de.lmu.ifi.dbs.elki.visualization.batikutil.DragableArea;
import de.lmu.ifi.dbs.elki.visualization.css.CSSClass;
import de.lmu.ifi.dbs.elki.visualization.projections.Projection;
-import de.lmu.ifi.dbs.elki.visualization.projections.Projection2D;
+import de.lmu.ifi.dbs.elki.visualization.projector.ScatterPlotProjector;
import de.lmu.ifi.dbs.elki.visualization.style.StyleLibrary;
import de.lmu.ifi.dbs.elki.visualization.svg.SVGPlot;
import de.lmu.ifi.dbs.elki.visualization.svg.SVGUtil;
import de.lmu.ifi.dbs.elki.visualization.visualizers.AbstractVisFactory;
import de.lmu.ifi.dbs.elki.visualization.visualizers.Visualization;
-import de.lmu.ifi.dbs.elki.visualization.visualizers.VisualizationTask;
-import de.lmu.ifi.dbs.elki.visualization.visualizers.VisualizerUtil;
import de.lmu.ifi.dbs.elki.visualization.visualizers.events.ContextChangedEvent;
/**
@@ -114,7 +113,7 @@ public class SelectionToolCubeVisualization<NV extends NumberVector<NV, ?>> exte
public SelectionToolCubeVisualization(VisualizationTask task) {
super(task);
this.result = task.getResult();
- this.dim = DatabaseUtil.dimensionality(rep);
+ this.dim = DatabaseUtil.dimensionality(rel);
context.addContextChangeListener(this);
incrementalRedraw();
}
@@ -174,7 +173,7 @@ public class SelectionToolCubeVisualization<NV extends NumberVector<NV, ?>> exte
v2.set(0, x2);
v2.set(1, y2);
- NV factory = DatabaseUtil.assumeVectorField(rep).getFactory();
+ NV factory = DatabaseUtil.assumeVectorField(rel).getFactory();
NV nv1 = proj.projectRenderToDataSpace(v1, factory);
NV nv2 = proj.projectRenderToDataSpace(v2, factory);
@@ -246,8 +245,8 @@ public class SelectionToolCubeVisualization<NV extends NumberVector<NV, ?>> exte
selection.clear();
boolean idIn = true;
- for(DBID id : rep.iterDBIDs()) {
- NV dbTupel = rep.get(id);
+ for(DBID id : rel.iterDBIDs()) {
+ NV dbTupel = rel.get(id);
idIn = true;
for(int i = 0; i < dim; i++) {
if(ranges != null && ranges[i] != null) {
@@ -308,23 +307,19 @@ public class SelectionToolCubeVisualization<NV extends NumberVector<NV, ?>> exte
@Override
public void processNewResult(HierarchicalResult baseResult, Result result) {
- Iterator<Relation<? extends NumberVector<?, ?>>> reps = VisualizerUtil.iterateVectorFieldRepresentations(baseResult);
- for(Relation<? extends NumberVector<?, ?>> rep : IterableUtil.fromIterator(reps)) {
- final ArrayList<SelectionResult> selectionResults = ResultUtil.filterResults(result, SelectionResult.class);
- for(SelectionResult selres : selectionResults) {
- final VisualizationTask task = new VisualizationTask(NAME, selres, rep, this, P2DVisualization.class);
+ final ArrayList<SelectionResult> selectionResults = ResultUtil.filterResults(result, SelectionResult.class);
+ for(SelectionResult selres : selectionResults) {
+ Iterator<ScatterPlotProjector<?>> ps = ResultUtil.filteredResults(baseResult, ScatterPlotProjector.class);
+ for(ScatterPlotProjector<?> p : IterableUtil.fromIterator(ps)) {
+ final VisualizationTask task = new VisualizationTask(NAME, selres, p.getRelation(), this);
task.put(VisualizationTask.META_LEVEL, VisualizationTask.LEVEL_INTERACTIVE);
task.put(VisualizationTask.META_TOOL, true);
task.put(VisualizationTask.META_NOTHUMB, true);
task.put(VisualizationTask.META_NOEXPORT, true);
baseResult.getHierarchy().add(selres, task);
+ baseResult.getHierarchy().add(p, task);
}
}
}
-
- @Override
- public Class<? extends Projection> getProjectionType() {
- return Projection2D.class;
- }
}
} \ No newline at end of file
diff --git a/src/de/lmu/ifi/dbs/elki/visualization/visualizers/vis2d/SelectionToolDotVisualization.java b/src/de/lmu/ifi/dbs/elki/visualization/visualizers/vis2d/SelectionToolDotVisualization.java
index 52cc77e7..a50a6cbb 100644
--- a/src/de/lmu/ifi/dbs/elki/visualization/visualizers/vis2d/SelectionToolDotVisualization.java
+++ b/src/de/lmu/ifi/dbs/elki/visualization/visualizers/vis2d/SelectionToolDotVisualization.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.visualization.visualizers.vis2d;
-/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.ArrayList;
import java.util.Iterator;
@@ -35,24 +36,22 @@ import de.lmu.ifi.dbs.elki.data.NumberVector;
import de.lmu.ifi.dbs.elki.database.ids.DBID;
import de.lmu.ifi.dbs.elki.database.ids.DBIDUtil;
import de.lmu.ifi.dbs.elki.database.ids.HashSetModifiableDBIDs;
-import de.lmu.ifi.dbs.elki.database.relation.Relation;
import de.lmu.ifi.dbs.elki.result.DBIDSelection;
import de.lmu.ifi.dbs.elki.result.HierarchicalResult;
import de.lmu.ifi.dbs.elki.result.Result;
import de.lmu.ifi.dbs.elki.result.ResultUtil;
import de.lmu.ifi.dbs.elki.result.SelectionResult;
import de.lmu.ifi.dbs.elki.utilities.iterator.IterableUtil;
+import de.lmu.ifi.dbs.elki.visualization.VisualizationTask;
import de.lmu.ifi.dbs.elki.visualization.batikutil.DragableArea;
import de.lmu.ifi.dbs.elki.visualization.css.CSSClass;
-import de.lmu.ifi.dbs.elki.visualization.projections.Projection;
import de.lmu.ifi.dbs.elki.visualization.projections.Projection2D;
+import de.lmu.ifi.dbs.elki.visualization.projector.ScatterPlotProjector;
import de.lmu.ifi.dbs.elki.visualization.style.StyleLibrary;
import de.lmu.ifi.dbs.elki.visualization.svg.SVGPlot;
import de.lmu.ifi.dbs.elki.visualization.svg.SVGUtil;
import de.lmu.ifi.dbs.elki.visualization.visualizers.AbstractVisFactory;
import de.lmu.ifi.dbs.elki.visualization.visualizers.Visualization;
-import de.lmu.ifi.dbs.elki.visualization.visualizers.VisualizationTask;
-import de.lmu.ifi.dbs.elki.visualization.visualizers.VisualizerUtil;
import de.lmu.ifi.dbs.elki.visualization.visualizers.events.ContextChangedEvent;
/**
@@ -217,8 +216,8 @@ public class SelectionToolDotVisualization<NV extends NumberVector<NV, ?>> exten
else {
selection = DBIDUtil.newHashSet(selContext.getSelectedIds());
}
- for(DBID id : rep.iterDBIDs()) {
- double[] vec = proj.fastProjectDataToRenderSpace(rep.get(id));
+ for(DBID id : rel.iterDBIDs()) {
+ double[] vec = proj.fastProjectDataToRenderSpace(rel.get(id));
if(vec[0] >= Math.min(p1.getX(), p2.getX()) && vec[0] <= Math.max(p1.getX(), p2.getX()) && vec[1] >= Math.min(p1.getY(), p2.getY()) && vec[1] <= Math.max(p1.getY(), p2.getY())) {
if(mode == Mode.INVERT) {
if(!selection.contains(id)) {
@@ -281,23 +280,19 @@ public class SelectionToolDotVisualization<NV extends NumberVector<NV, ?>> exten
@Override
public void processNewResult(HierarchicalResult baseResult, Result result) {
- Iterator<Relation<? extends NumberVector<?, ?>>> reps = VisualizerUtil.iterateVectorFieldRepresentations(baseResult);
- for(Relation<? extends NumberVector<?, ?>> rep : IterableUtil.fromIterator(reps)) {
- final ArrayList<SelectionResult> selectionResults = ResultUtil.filterResults(result, SelectionResult.class);
- for(SelectionResult selres : selectionResults) {
- final VisualizationTask task = new VisualizationTask(NAME, selres, rep, this, P2DVisualization.class);
+ final ArrayList<SelectionResult> selectionResults = ResultUtil.filterResults(result, SelectionResult.class);
+ for(SelectionResult selres : selectionResults) {
+ Iterator<ScatterPlotProjector<?>> ps = ResultUtil.filteredResults(baseResult, ScatterPlotProjector.class);
+ for(ScatterPlotProjector<?> p : IterableUtil.fromIterator(ps)) {
+ final VisualizationTask task = new VisualizationTask(NAME, selres, p.getRelation(), this);
task.put(VisualizationTask.META_LEVEL, VisualizationTask.LEVEL_INTERACTIVE);
task.put(VisualizationTask.META_TOOL, true);
task.put(VisualizationTask.META_NOTHUMB, true);
task.put(VisualizationTask.META_NOEXPORT, true);
baseResult.getHierarchy().add(selres, task);
+ baseResult.getHierarchy().add(p, task);
}
}
}
-
- @Override
- public Class<? extends Projection> getProjectionType() {
- return Projection2D.class;
- }
}
} \ No newline at end of file
diff --git a/src/de/lmu/ifi/dbs/elki/visualization/visualizers/vis2d/ToolBox2DVisualization.java b/src/de/lmu/ifi/dbs/elki/visualization/visualizers/vis2d/ToolBox2DVisualization.java
index c72b53e6..ba91975c 100644
--- a/src/de/lmu/ifi/dbs/elki/visualization/visualizers/vis2d/ToolBox2DVisualization.java
+++ b/src/de/lmu/ifi/dbs/elki/visualization/visualizers/vis2d/ToolBox2DVisualization.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.visualization.visualizers.vis2d;
-/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.ArrayList;
import java.util.Iterator;
@@ -33,23 +34,22 @@ import org.w3c.dom.events.EventListener;
import org.w3c.dom.events.EventTarget;
import de.lmu.ifi.dbs.elki.data.NumberVector;
-import de.lmu.ifi.dbs.elki.database.relation.Relation;
import de.lmu.ifi.dbs.elki.logging.Logging;
import de.lmu.ifi.dbs.elki.math.DoubleMinMax;
import de.lmu.ifi.dbs.elki.result.HierarchicalResult;
import de.lmu.ifi.dbs.elki.result.Result;
+import de.lmu.ifi.dbs.elki.result.ResultUtil;
import de.lmu.ifi.dbs.elki.utilities.FormatUtil;
import de.lmu.ifi.dbs.elki.utilities.iterator.IterableUtil;
import de.lmu.ifi.dbs.elki.utilities.pairs.Pair;
+import de.lmu.ifi.dbs.elki.visualization.VisualizationTask;
import de.lmu.ifi.dbs.elki.visualization.css.CSSClass;
-import de.lmu.ifi.dbs.elki.visualization.projections.Projection;
-import de.lmu.ifi.dbs.elki.visualization.projections.Projection2D;
+import de.lmu.ifi.dbs.elki.visualization.projector.ScatterPlotProjector;
import de.lmu.ifi.dbs.elki.visualization.style.StyleLibrary;
import de.lmu.ifi.dbs.elki.visualization.svg.SVGPlot;
import de.lmu.ifi.dbs.elki.visualization.svg.SVGUtil;
import de.lmu.ifi.dbs.elki.visualization.visualizers.AbstractVisFactory;
import de.lmu.ifi.dbs.elki.visualization.visualizers.Visualization;
-import de.lmu.ifi.dbs.elki.visualization.visualizers.VisualizationTask;
import de.lmu.ifi.dbs.elki.visualization.visualizers.VisualizerUtil;
import de.lmu.ifi.dbs.elki.visualization.visualizers.events.ContextChangedEvent;
@@ -131,15 +131,16 @@ public class ToolBox2DVisualization<NV extends NumberVector<NV, ?>> extends P2DV
}
/**
- * Sets the toolbox
+ * Build the toolbox
*/
private void buildToolBox() {
double scale = StyleLibrary.SCALE;
deleteChildren(container);
ArrayList<VisualizationTask> vis = new ArrayList<VisualizationTask>();
- for(VisualizationTask task : context.iterVisualizers()) {
- if(VisualizerUtil.isTool(task)) {
+ final Iterable<VisualizationTask> visualizers = ResultUtil.filteredResults(task.getResult(), VisualizationTask.class);
+ for(VisualizationTask task : visualizers) {
+ if(VisualizerUtil.isTool(task) && !vis.contains(task)) {
vis.add(task);
}
}
@@ -305,19 +306,14 @@ public class ToolBox2DVisualization<NV extends NumberVector<NV, ?>> extends P2DV
@Override
public void processNewResult(HierarchicalResult baseResult, Result result) {
- Iterator<Relation<? extends NumberVector<?, ?>>> reps = VisualizerUtil.iterateVectorFieldRepresentations(result);
- for(Relation<? extends NumberVector<?, ?>> rep : IterableUtil.fromIterator(reps)) {
- final VisualizationTask task = new VisualizationTask(NAME, rep, rep, this, P2DVisualization.class);
+ Iterator<ScatterPlotProjector<?>> ps = ResultUtil.filteredResults(result, ScatterPlotProjector.class);
+ for(ScatterPlotProjector<?> p : IterableUtil.fromIterator(ps)) {
+ final VisualizationTask task = new VisualizationTask(NAME, p, p.getRelation(), this);
task.put(VisualizationTask.META_LEVEL, VisualizationTask.LEVEL_INTERACTIVE);
task.put(VisualizationTask.META_NOTHUMB, true);
task.put(VisualizationTask.META_NOEXPORT, true);
- baseResult.getHierarchy().add(rep, task);
+ baseResult.getHierarchy().add(p, task);
}
}
-
- @Override
- public Class<? extends Projection> getProjectionType() {
- return Projection2D.class;
- }
}
} \ No newline at end of file
diff --git a/src/de/lmu/ifi/dbs/elki/visualization/visualizers/vis2d/TooltipScoreVisualization.java b/src/de/lmu/ifi/dbs/elki/visualization/visualizers/vis2d/TooltipScoreVisualization.java
index 160fad55..309cc9c7 100644
--- a/src/de/lmu/ifi/dbs/elki/visualization/visualizers/vis2d/TooltipScoreVisualization.java
+++ b/src/de/lmu/ifi/dbs/elki/visualization/visualizers/vis2d/TooltipScoreVisualization.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.visualization.visualizers.vis2d;
-/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.text.NumberFormat;
import java.util.Iterator;
@@ -43,15 +44,13 @@ import de.lmu.ifi.dbs.elki.utilities.optionhandling.OptionID;
import de.lmu.ifi.dbs.elki.utilities.optionhandling.constraints.GreaterEqualConstraint;
import de.lmu.ifi.dbs.elki.utilities.optionhandling.parameterization.Parameterization;
import de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters.IntParameter;
+import de.lmu.ifi.dbs.elki.visualization.VisualizationTask;
import de.lmu.ifi.dbs.elki.visualization.css.CSSClass;
-import de.lmu.ifi.dbs.elki.visualization.projections.Projection;
-import de.lmu.ifi.dbs.elki.visualization.projections.Projection2D;
+import de.lmu.ifi.dbs.elki.visualization.projector.ScatterPlotProjector;
import de.lmu.ifi.dbs.elki.visualization.style.StyleLibrary;
import de.lmu.ifi.dbs.elki.visualization.svg.SVGPlot;
import de.lmu.ifi.dbs.elki.visualization.visualizers.AbstractVisFactory;
import de.lmu.ifi.dbs.elki.visualization.visualizers.Visualization;
-import de.lmu.ifi.dbs.elki.visualization.visualizers.VisualizationTask;
-import de.lmu.ifi.dbs.elki.visualization.visualizers.VisualizerUtil;
/**
* Generates a SVG-Element containing Tooltips. Tooltips remain invisible until
@@ -60,7 +59,7 @@ import de.lmu.ifi.dbs.elki.visualization.visualizers.VisualizerUtil;
*
* @author Remigius Wojdanowski
*/
-public class TooltipScoreVisualization<NV extends NumberVector<NV, ?>> extends TooltipVisualization<NV> {
+public class TooltipScoreVisualization<NV extends NumberVector<NV, ?>> extends AbstractTooltipVisualization<NV> {
/**
* A short name characterizing this Visualizer.
*/
@@ -184,23 +183,19 @@ public class TooltipScoreVisualization<NV extends NumberVector<NV, ?>> extends T
@Override
public void processNewResult(HierarchicalResult baseResult, Result result) {
- Iterator<Relation<? extends NumberVector<?, ?>>> reps = VisualizerUtil.iterateVectorFieldRepresentations(baseResult);
- for(Relation<? extends NumberVector<?, ?>> rep : IterableUtil.fromIterator(reps)) {
- // TODO: we can also visualize other scores!
- List<OutlierResult> ors = ResultUtil.filterResults(result, OutlierResult.class);
- for(OutlierResult o : ors) {
- final VisualizationTask task = new VisualizationTask(NAME, o.getScores(), rep, this, P2DVisualization.class);
+ // TODO: we can also visualize other scores!
+ List<OutlierResult> ors = ResultUtil.filterResults(result, OutlierResult.class);
+ for(OutlierResult o : ors) {
+ Iterator<ScatterPlotProjector<?>> ps = ResultUtil.filteredResults(baseResult, ScatterPlotProjector.class);
+ for(ScatterPlotProjector<?> p : IterableUtil.fromIterator(ps)) {
+ final VisualizationTask task = new VisualizationTask(NAME, o.getScores(), p.getRelation(), this);
task.put(VisualizationTask.META_TOOL, true);
baseResult.getHierarchy().add(o.getScores(), task);
+ baseResult.getHierarchy().add(p, task);
}
}
}
- @Override
- public Class<? extends Projection> getProjectionType() {
- return Projection2D.class;
- }
-
/**
* Parameterization class.
*
diff --git a/src/de/lmu/ifi/dbs/elki/visualization/visualizers/vis2d/TooltipStringVisualization.java b/src/de/lmu/ifi/dbs/elki/visualization/visualizers/vis2d/TooltipStringVisualization.java
index 2cc34edf..044dc66f 100644
--- a/src/de/lmu/ifi/dbs/elki/visualization/visualizers/vis2d/TooltipStringVisualization.java
+++ b/src/de/lmu/ifi/dbs/elki/visualization/visualizers/vis2d/TooltipStringVisualization.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.visualization.visualizers.vis2d;
-/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.ArrayList;
import java.util.Iterator;
@@ -29,6 +30,7 @@ import org.apache.batik.util.SVGConstants;
import org.w3c.dom.Element;
import de.lmu.ifi.dbs.elki.data.ClassLabel;
+import de.lmu.ifi.dbs.elki.data.ExternalID;
import de.lmu.ifi.dbs.elki.data.LabelList;
import de.lmu.ifi.dbs.elki.data.NumberVector;
import de.lmu.ifi.dbs.elki.database.ids.DBID;
@@ -37,15 +39,13 @@ import de.lmu.ifi.dbs.elki.result.HierarchicalResult;
import de.lmu.ifi.dbs.elki.result.Result;
import de.lmu.ifi.dbs.elki.result.ResultUtil;
import de.lmu.ifi.dbs.elki.utilities.iterator.IterableUtil;
+import de.lmu.ifi.dbs.elki.visualization.VisualizationTask;
import de.lmu.ifi.dbs.elki.visualization.css.CSSClass;
-import de.lmu.ifi.dbs.elki.visualization.projections.Projection;
-import de.lmu.ifi.dbs.elki.visualization.projections.Projection2D;
+import de.lmu.ifi.dbs.elki.visualization.projector.ScatterPlotProjector;
import de.lmu.ifi.dbs.elki.visualization.style.StyleLibrary;
import de.lmu.ifi.dbs.elki.visualization.svg.SVGPlot;
import de.lmu.ifi.dbs.elki.visualization.visualizers.AbstractVisFactory;
import de.lmu.ifi.dbs.elki.visualization.visualizers.Visualization;
-import de.lmu.ifi.dbs.elki.visualization.visualizers.VisualizationTask;
-import de.lmu.ifi.dbs.elki.visualization.visualizers.VisualizerUtil;
/**
* Generates a SVG-Element containing Tooltips. Tooltips remain invisible until
@@ -59,7 +59,7 @@ import de.lmu.ifi.dbs.elki.visualization.visualizers.VisualizerUtil;
*
* @param <NV> Data type visualized.
*/
-public class TooltipStringVisualization<NV extends NumberVector<NV, ?>> extends TooltipVisualization<NV> {
+public class TooltipStringVisualization<NV extends NumberVector<NV, ?>> extends AbstractTooltipVisualization<NV> {
/**
* A short name characterizing this Visualizer.
*/
@@ -180,33 +180,45 @@ public class TooltipStringVisualization<NV extends NumberVector<NV, ?>> extends
@Override
public void processNewResult(HierarchicalResult baseResult, Result result) {
- Iterator<Relation<? extends NumberVector<?, ?>>> vreps = VisualizerUtil.iterateVectorFieldRepresentations(baseResult);
- for(Relation<? extends NumberVector<?, ?>> vrep : IterableUtil.fromIterator(vreps)) {
- ArrayList<Relation<?>> reps = ResultUtil.filterResults(result, Relation.class);
- for(Relation<?> rep : reps) {
- if (DBID.class.isAssignableFrom(rep.getDataTypeInformation().getRestrictionClass())) {
- final VisualizationTask task = new VisualizationTask(NAME_ID, rep, vrep, this, P2DVisualization.class);
+ ArrayList<Relation<?>> reps = ResultUtil.filterResults(result, Relation.class);
+ for(Relation<?> rep : reps) {
+ if(DBID.class.isAssignableFrom(rep.getDataTypeInformation().getRestrictionClass())) {
+ Iterator<ScatterPlotProjector<?>> ps = ResultUtil.filteredResults(baseResult, ScatterPlotProjector.class);
+ for(ScatterPlotProjector<?> p : IterableUtil.fromIterator(ps)) {
+ final VisualizationTask task = new VisualizationTask(NAME_ID, rep, p.getRelation(), this);
task.put(VisualizationTask.META_TOOL, true);
baseResult.getHierarchy().add(rep, task);
+ baseResult.getHierarchy().add(p, task);
}
- if (ClassLabel.class.isAssignableFrom(rep.getDataTypeInformation().getRestrictionClass())) {
- final VisualizationTask task = new VisualizationTask(NAME_CLASS, rep, vrep, this, P2DVisualization.class);
+ }
+ if(ClassLabel.class.isAssignableFrom(rep.getDataTypeInformation().getRestrictionClass())) {
+ Iterator<ScatterPlotProjector<?>> ps = ResultUtil.filteredResults(baseResult, ScatterPlotProjector.class);
+ for(ScatterPlotProjector<?> p : IterableUtil.fromIterator(ps)) {
+ final VisualizationTask task = new VisualizationTask(NAME_CLASS, rep, p.getRelation(), this);
task.put(VisualizationTask.META_TOOL, true);
baseResult.getHierarchy().add(rep, task);
+ baseResult.getHierarchy().add(p, task);
}
- if (LabelList.class.isAssignableFrom(rep.getDataTypeInformation().getRestrictionClass())) {
- final VisualizationTask task = new VisualizationTask(NAME_LABEL, rep, vrep, this, P2DVisualization.class);
+ }
+ if(LabelList.class.isAssignableFrom(rep.getDataTypeInformation().getRestrictionClass())) {
+ Iterator<ScatterPlotProjector<?>> ps = ResultUtil.filteredResults(baseResult, ScatterPlotProjector.class);
+ for(ScatterPlotProjector<?> p : IterableUtil.fromIterator(ps)) {
+ final VisualizationTask task = new VisualizationTask(NAME_LABEL, rep, p.getRelation(), this);
task.put(VisualizationTask.META_TOOL, true);
baseResult.getHierarchy().add(rep, task);
+ baseResult.getHierarchy().add(p, task);
+ }
+ }
+ if(ExternalID.class.isAssignableFrom(rep.getDataTypeInformation().getRestrictionClass())) {
+ Iterator<ScatterPlotProjector<?>> ps = ResultUtil.filteredResults(baseResult, ScatterPlotProjector.class);
+ for(ScatterPlotProjector<?> p : IterableUtil.fromIterator(ps)) {
+ final VisualizationTask task = new VisualizationTask(NAME_EID, rep, p.getRelation(), this);
+ task.put(VisualizationTask.META_TOOL, true);
+ baseResult.getHierarchy().add(rep, task);
+ baseResult.getHierarchy().add(p, task);
}
- // TODO: external IDs separate?
}
}
}
-
- @Override
- public Class<? extends Projection> getProjectionType() {
- return Projection2D.class;
- }
}
} \ No newline at end of file
diff --git a/src/de/lmu/ifi/dbs/elki/visualization/visualizers/vis2d/TreeMBRVisualization.java b/src/de/lmu/ifi/dbs/elki/visualization/visualizers/vis2d/TreeMBRVisualization.java
index 3d254764..5fe6aac2 100644
--- a/src/de/lmu/ifi/dbs/elki/visualization/visualizers/vis2d/TreeMBRVisualization.java
+++ b/src/de/lmu/ifi/dbs/elki/visualization/visualizers/vis2d/TreeMBRVisualization.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.visualization.visualizers.vis2d;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.ArrayList;
import java.util.Iterator;
@@ -33,7 +34,6 @@ import de.lmu.ifi.dbs.elki.data.spatial.SpatialComparable;
import de.lmu.ifi.dbs.elki.data.spatial.SpatialUtil;
import de.lmu.ifi.dbs.elki.database.datastore.DataStoreEvent;
import de.lmu.ifi.dbs.elki.database.datastore.DataStoreListener;
-import de.lmu.ifi.dbs.elki.database.relation.Relation;
import de.lmu.ifi.dbs.elki.index.tree.spatial.SpatialEntry;
import de.lmu.ifi.dbs.elki.index.tree.spatial.rstarvariants.AbstractRStarTree;
import de.lmu.ifi.dbs.elki.index.tree.spatial.rstarvariants.AbstractRStarTreeNode;
@@ -47,18 +47,17 @@ import de.lmu.ifi.dbs.elki.utilities.optionhandling.AbstractParameterizer;
import de.lmu.ifi.dbs.elki.utilities.optionhandling.OptionID;
import de.lmu.ifi.dbs.elki.utilities.optionhandling.parameterization.Parameterization;
import de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters.Flag;
+import de.lmu.ifi.dbs.elki.visualization.VisualizationTask;
import de.lmu.ifi.dbs.elki.visualization.colors.ColorLibrary;
import de.lmu.ifi.dbs.elki.visualization.css.CSSClass;
-import de.lmu.ifi.dbs.elki.visualization.projections.Projection;
import de.lmu.ifi.dbs.elki.visualization.projections.Projection2D;
+import de.lmu.ifi.dbs.elki.visualization.projector.ScatterPlotProjector;
import de.lmu.ifi.dbs.elki.visualization.style.StyleLibrary;
import de.lmu.ifi.dbs.elki.visualization.svg.SVGHyperCube;
import de.lmu.ifi.dbs.elki.visualization.svg.SVGPlot;
import de.lmu.ifi.dbs.elki.visualization.svg.SVGUtil;
import de.lmu.ifi.dbs.elki.visualization.visualizers.AbstractVisFactory;
import de.lmu.ifi.dbs.elki.visualization.visualizers.Visualization;
-import de.lmu.ifi.dbs.elki.visualization.visualizers.VisualizationTask;
-import de.lmu.ifi.dbs.elki.visualization.visualizers.VisualizerUtil;
/**
* Visualize the bounding rectangles of an R-Tree based index.
@@ -226,24 +225,20 @@ public class TreeMBRVisualization<NV extends NumberVector<NV, ?>, N extends Abst
@Override
public void processNewResult(HierarchicalResult baseResult, Result result) {
- Iterator<Relation<? extends NumberVector<?, ?>>> reps = VisualizerUtil.iterateVectorFieldRepresentations(baseResult);
- for(Relation<? extends NumberVector<?, ?>> rep : IterableUtil.fromIterator(reps)) {
- ArrayList<AbstractRStarTree<RStarTreeNode, SpatialEntry>> trees = ResultUtil.filterResults(result, AbstractRStarTree.class);
- for(AbstractRStarTree<RStarTreeNode, SpatialEntry> tree : trees) {
- if(tree instanceof Result) {
- final VisualizationTask task = new VisualizationTask(NAME, (Result) tree, rep, this, P2DVisualization.class);
+ ArrayList<AbstractRStarTree<RStarTreeNode, SpatialEntry>> trees = ResultUtil.filterResults(result, AbstractRStarTree.class);
+ for(AbstractRStarTree<RStarTreeNode, SpatialEntry> tree : trees) {
+ if(tree instanceof Result) {
+ Iterator<ScatterPlotProjector<?>> ps = ResultUtil.filteredResults(baseResult, ScatterPlotProjector.class);
+ for(ScatterPlotProjector<?> p : IterableUtil.fromIterator(ps)) {
+ final VisualizationTask task = new VisualizationTask(NAME, (Result) tree, p.getRelation(), this);
task.put(VisualizationTask.META_LEVEL, VisualizationTask.LEVEL_BACKGROUND + 1);
baseResult.getHierarchy().add((Result) tree, task);
+ baseResult.getHierarchy().add(p, task);
}
}
}
}
- @Override
- public Class<? extends Projection> getProjectionType() {
- return Projection2D.class;
- }
-
/**
* Parameterization class.
*
diff --git a/src/de/lmu/ifi/dbs/elki/visualization/visualizers/vis2d/TreeSphereVisualization.java b/src/de/lmu/ifi/dbs/elki/visualization/visualizers/vis2d/TreeSphereVisualization.java
index 2d0a20af..1aec1ead 100644
--- a/src/de/lmu/ifi/dbs/elki/visualization/visualizers/vis2d/TreeSphereVisualization.java
+++ b/src/de/lmu/ifi/dbs/elki/visualization/visualizers/vis2d/TreeSphereVisualization.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.visualization.visualizers.vis2d;
-/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.ArrayList;
import java.util.Iterator;
@@ -32,7 +33,6 @@ import de.lmu.ifi.dbs.elki.data.NumberVector;
import de.lmu.ifi.dbs.elki.database.datastore.DataStoreEvent;
import de.lmu.ifi.dbs.elki.database.datastore.DataStoreListener;
import de.lmu.ifi.dbs.elki.database.ids.DBID;
-import de.lmu.ifi.dbs.elki.database.relation.Relation;
import de.lmu.ifi.dbs.elki.distance.distancefunction.DistanceFunction;
import de.lmu.ifi.dbs.elki.distance.distancefunction.EuclideanDistanceFunction;
import de.lmu.ifi.dbs.elki.distance.distancefunction.LPNormDistanceFunction;
@@ -50,18 +50,17 @@ import de.lmu.ifi.dbs.elki.utilities.iterator.IterableUtil;
import de.lmu.ifi.dbs.elki.utilities.optionhandling.AbstractParameterizer;
import de.lmu.ifi.dbs.elki.utilities.optionhandling.parameterization.Parameterization;
import de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters.Flag;
+import de.lmu.ifi.dbs.elki.visualization.VisualizationTask;
import de.lmu.ifi.dbs.elki.visualization.colors.ColorLibrary;
import de.lmu.ifi.dbs.elki.visualization.css.CSSClass;
-import de.lmu.ifi.dbs.elki.visualization.projections.Projection;
import de.lmu.ifi.dbs.elki.visualization.projections.Projection2D;
+import de.lmu.ifi.dbs.elki.visualization.projector.ScatterPlotProjector;
import de.lmu.ifi.dbs.elki.visualization.style.StyleLibrary;
import de.lmu.ifi.dbs.elki.visualization.svg.SVGHyperSphere;
import de.lmu.ifi.dbs.elki.visualization.svg.SVGPlot;
import de.lmu.ifi.dbs.elki.visualization.svg.SVGUtil;
import de.lmu.ifi.dbs.elki.visualization.visualizers.AbstractVisFactory;
import de.lmu.ifi.dbs.elki.visualization.visualizers.Visualization;
-import de.lmu.ifi.dbs.elki.visualization.visualizers.VisualizationTask;
-import de.lmu.ifi.dbs.elki.visualization.visualizers.VisualizerUtil;
/**
* Visualize the bounding sphere of a metric index.
@@ -212,7 +211,7 @@ public class TreeSphereVisualization<NV extends NumberVector<NV, ?>, D extends N
private void visualizeMTreeEntry(SVGPlot svgp, Element layer, Projection2D proj, AbstractMTree<NV, D, N, E> mtree, E entry, int depth) {
DBID roid = entry.getRoutingObjectID();
if(roid != null) {
- NV ro = rep.get(roid);
+ NV ro = rel.get(roid);
D rad = entry.getCoveringRadius();
final Element r;
@@ -281,14 +280,15 @@ public class TreeSphereVisualization<NV extends NumberVector<NV, ?>, D extends N
@Override
public void processNewResult(HierarchicalResult baseResult, Result result) {
- Iterator<Relation<? extends NumberVector<?, ?>>> reps = VisualizerUtil.iterateVectorFieldRepresentations(baseResult);
- for(Relation<? extends NumberVector<?, ?>> rep : IterableUtil.fromIterator(reps)) {
+ Iterator<ScatterPlotProjector<?>> ps = ResultUtil.filteredResults(baseResult, ScatterPlotProjector.class);
+ for(ScatterPlotProjector<?> p : IterableUtil.fromIterator(ps)) {
ArrayList<AbstractMTree<NV, DoubleDistance, ?, ?>> trees = ResultUtil.filterResults(result, AbstractMTree.class);
for(AbstractMTree<NV, DoubleDistance, ?, ?> tree : trees) {
if(canVisualize(tree) && tree instanceof Result) {
- final VisualizationTask task = new VisualizationTask(NAME, (Result) tree, rep, this, P2DVisualization.class);
+ final VisualizationTask task = new VisualizationTask(NAME, (Result) tree, p.getRelation(), this);
task.put(VisualizationTask.META_LEVEL, VisualizationTask.LEVEL_BACKGROUND + 1);
baseResult.getHierarchy().add((Result) tree, task);
+ baseResult.getHierarchy().add(p, task);
}
}
}
@@ -299,11 +299,6 @@ public class TreeSphereVisualization<NV extends NumberVector<NV, ?>, D extends N
return new TreeSphereVisualization<NV, DoubleDistance, MTreeNode<NV, DoubleDistance>, MTreeEntry<DoubleDistance>>(task, fill);
}
- @Override
- public Class<? extends Projection> getProjectionType() {
- return Projection2D.class;
- }
-
/**
* Parameterization class.
*
diff --git a/src/de/lmu/ifi/dbs/elki/visualization/visualizers/visunproj/ClusterEvaluationVisFactory.java b/src/de/lmu/ifi/dbs/elki/visualization/visualizers/visunproj/ClusterEvaluationVisFactory.java
index a5146dd5..469d6db5 100644
--- a/src/de/lmu/ifi/dbs/elki/visualization/visualizers/visunproj/ClusterEvaluationVisFactory.java
+++ b/src/de/lmu/ifi/dbs/elki/visualization/visualizers/visunproj/ClusterEvaluationVisFactory.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.visualization.visualizers.visunproj;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.ArrayList;
@@ -33,14 +34,13 @@ import de.lmu.ifi.dbs.elki.result.HierarchicalResult;
import de.lmu.ifi.dbs.elki.result.Result;
import de.lmu.ifi.dbs.elki.result.ResultUtil;
import de.lmu.ifi.dbs.elki.utilities.FormatUtil;
-import de.lmu.ifi.dbs.elki.visualization.projections.Projection;
+import de.lmu.ifi.dbs.elki.visualization.VisualizationTask;
import de.lmu.ifi.dbs.elki.visualization.style.StyleLibrary;
import de.lmu.ifi.dbs.elki.visualization.svg.SVGPlot;
import de.lmu.ifi.dbs.elki.visualization.svg.SVGUtil;
import de.lmu.ifi.dbs.elki.visualization.visualizers.AbstractVisFactory;
import de.lmu.ifi.dbs.elki.visualization.visualizers.StaticVisualization;
import de.lmu.ifi.dbs.elki.visualization.visualizers.Visualization;
-import de.lmu.ifi.dbs.elki.visualization.visualizers.VisualizationTask;
/**
* Pseudo-Visualizer, that lists the cluster evaluation results found.
@@ -68,7 +68,9 @@ public class ClusterEvaluationVisFactory extends AbstractVisFactory {
public void processNewResult(HierarchicalResult baseResult, Result newResult) {
final ArrayList<EvaluatePairCountingFMeasure.ScoreResult> srs = ResultUtil.filterResults(newResult, EvaluatePairCountingFMeasure.ScoreResult.class);
for(EvaluatePairCountingFMeasure.ScoreResult sr : srs) {
- final VisualizationTask task = new VisualizationTask(NAME, sr, null, this, null);
+ final VisualizationTask task = new VisualizationTask(NAME, sr, null, this);
+ task.width = 1.0;
+ task.height = 0.5;
task.put(VisualizationTask.META_LEVEL, VisualizationTask.LEVEL_STATIC);
baseResult.getHierarchy().add(sr, task);
}
@@ -119,9 +121,10 @@ public class ClusterEvaluationVisFactory extends AbstractVisFactory {
return new StaticVisualization(task, layer);
}
-
+
@Override
- public Class<? extends Projection> getProjectionType() {
- return null;
+ public boolean allowThumbnails(@SuppressWarnings("unused") VisualizationTask task) {
+ // Don't use thumbnails
+ return false;
}
} \ No newline at end of file
diff --git a/src/de/lmu/ifi/dbs/elki/visualization/visualizers/visunproj/CurveVisFactory.java b/src/de/lmu/ifi/dbs/elki/visualization/visualizers/visunproj/CurveVisFactory.java
index e71ffe73..a45f2007 100644
--- a/src/de/lmu/ifi/dbs/elki/visualization/visualizers/visunproj/CurveVisFactory.java
+++ b/src/de/lmu/ifi/dbs/elki/visualization/visualizers/visunproj/CurveVisFactory.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.visualization.visualizers.visunproj;
-/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.Collection;
import java.util.Iterator;
@@ -40,9 +41,10 @@ import de.lmu.ifi.dbs.elki.utilities.FormatUtil;
import de.lmu.ifi.dbs.elki.utilities.iterator.AbstractFilteredIterator;
import de.lmu.ifi.dbs.elki.utilities.iterator.IterableIterator;
import de.lmu.ifi.dbs.elki.utilities.pairs.DoubleDoublePair;
+import de.lmu.ifi.dbs.elki.visualization.VisualizationTask;
+import de.lmu.ifi.dbs.elki.visualization.VisualizerContext;
import de.lmu.ifi.dbs.elki.visualization.css.CSSClass;
import de.lmu.ifi.dbs.elki.visualization.css.CSSClassManager.CSSNamingConflict;
-import de.lmu.ifi.dbs.elki.visualization.projections.Projection;
import de.lmu.ifi.dbs.elki.visualization.scales.LinearScale;
import de.lmu.ifi.dbs.elki.visualization.style.StyleLibrary;
import de.lmu.ifi.dbs.elki.visualization.svg.SVGPath;
@@ -52,8 +54,6 @@ import de.lmu.ifi.dbs.elki.visualization.svg.SVGUtil;
import de.lmu.ifi.dbs.elki.visualization.visualizers.AbstractVisFactory;
import de.lmu.ifi.dbs.elki.visualization.visualizers.StaticVisualization;
import de.lmu.ifi.dbs.elki.visualization.visualizers.Visualization;
-import de.lmu.ifi.dbs.elki.visualization.visualizers.VisualizationTask;
-import de.lmu.ifi.dbs.elki.visualization.visualizers.VisualizerContext;
/**
* Visualizer to render a simple 2D curve such as a ROC curve.
@@ -226,7 +226,9 @@ public class CurveVisFactory extends AbstractVisFactory {
final IterableIterator<IterableResult<?>> iterableResults = ResultUtil.filteredResults(result, IterableResult.class);
final IterableIterator<IterableResult<DoubleDoublePair>> curves = new CurveFilter(iterableResults);
for (IterableResult<DoubleDoublePair> curve : curves) {
- final VisualizationTask task = new VisualizationTask(NAME, curve, null, this, null);
+ final VisualizationTask task = new VisualizationTask(NAME, curve, null, this);
+ task.width = 1.0;
+ task.height = 1.0;
task.put(VisualizationTask.META_LEVEL, VisualizationTask.LEVEL_STATIC);
baseResult.getHierarchy().add(curve, task);
}
@@ -237,9 +239,4 @@ public class CurveVisFactory extends AbstractVisFactory {
// TODO: depending on the curve complexity?
return false;
}
-
- @Override
- public Class<? extends Projection> getProjectionType() {
- return null;
- }
} \ No newline at end of file
diff --git a/src/de/lmu/ifi/dbs/elki/visualization/visualizers/visunproj/HistogramVisFactory.java b/src/de/lmu/ifi/dbs/elki/visualization/visualizers/visunproj/HistogramVisFactory.java
index 3d328b58..c8dfe0c8 100644
--- a/src/de/lmu/ifi/dbs/elki/visualization/visualizers/visunproj/HistogramVisFactory.java
+++ b/src/de/lmu/ifi/dbs/elki/visualization/visualizers/visunproj/HistogramVisFactory.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.visualization.visualizers.visunproj;
-/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.List;
@@ -34,10 +35,11 @@ import de.lmu.ifi.dbs.elki.result.HierarchicalResult;
import de.lmu.ifi.dbs.elki.result.HistogramResult;
import de.lmu.ifi.dbs.elki.result.Result;
import de.lmu.ifi.dbs.elki.result.ResultUtil;
+import de.lmu.ifi.dbs.elki.visualization.VisualizationTask;
+import de.lmu.ifi.dbs.elki.visualization.VisualizerContext;
import de.lmu.ifi.dbs.elki.visualization.colors.ColorLibrary;
import de.lmu.ifi.dbs.elki.visualization.css.CSSClass;
import de.lmu.ifi.dbs.elki.visualization.css.CSSClassManager.CSSNamingConflict;
-import de.lmu.ifi.dbs.elki.visualization.projections.Projection;
import de.lmu.ifi.dbs.elki.visualization.scales.LinearScale;
import de.lmu.ifi.dbs.elki.visualization.style.StyleLibrary;
import de.lmu.ifi.dbs.elki.visualization.svg.SVGPath;
@@ -47,8 +49,6 @@ import de.lmu.ifi.dbs.elki.visualization.svg.SVGUtil;
import de.lmu.ifi.dbs.elki.visualization.visualizers.AbstractVisFactory;
import de.lmu.ifi.dbs.elki.visualization.visualizers.StaticVisualization;
import de.lmu.ifi.dbs.elki.visualization.visualizers.Visualization;
-import de.lmu.ifi.dbs.elki.visualization.visualizers.VisualizationTask;
-import de.lmu.ifi.dbs.elki.visualization.visualizers.VisualizerContext;
/**
* Visualizer to draw histograms.
@@ -168,7 +168,9 @@ public class HistogramVisFactory extends AbstractVisFactory {
public void processNewResult(HierarchicalResult baseResult, Result newResult) {
List<HistogramResult<? extends NumberVector<?, ?>>> histograms = ResultUtil.filterResults(newResult, HistogramResult.class);
for(HistogramResult<? extends NumberVector<?, ?>> histogram : histograms) {
- final VisualizationTask task = new VisualizationTask(NAME, histogram, null, this, null);
+ final VisualizationTask task = new VisualizationTask(NAME, histogram, null, this);
+ task.width = 2.0;
+ task.height = 1.0;
task.put(VisualizationTask.META_LEVEL, VisualizationTask.LEVEL_STATIC);
baseResult.getHierarchy().add(histogram, task);
}
@@ -179,9 +181,4 @@ public class HistogramVisFactory extends AbstractVisFactory {
// TODO: depending on the histogram complexity?
return false;
}
-
- @Override
- public Class<? extends Projection> getProjectionType() {
- return null;
- }
} \ No newline at end of file
diff --git a/src/de/lmu/ifi/dbs/elki/visualization/visualizers/visunproj/KeyVisFactory.java b/src/de/lmu/ifi/dbs/elki/visualization/visualizers/visunproj/KeyVisFactory.java
index 26462faf..69813d99 100644
--- a/src/de/lmu/ifi/dbs/elki/visualization/visualizers/visunproj/KeyVisFactory.java
+++ b/src/de/lmu/ifi/dbs/elki/visualization/visualizers/visunproj/KeyVisFactory.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.visualization.visualizers.visunproj;
-/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.Collection;
import java.util.List;
@@ -34,7 +35,8 @@ import de.lmu.ifi.dbs.elki.data.model.Model;
import de.lmu.ifi.dbs.elki.result.HierarchicalResult;
import de.lmu.ifi.dbs.elki.result.Result;
import de.lmu.ifi.dbs.elki.result.ResultUtil;
-import de.lmu.ifi.dbs.elki.visualization.projections.Projection;
+import de.lmu.ifi.dbs.elki.visualization.VisualizationTask;
+import de.lmu.ifi.dbs.elki.visualization.VisualizerContext;
import de.lmu.ifi.dbs.elki.visualization.style.StyleLibrary;
import de.lmu.ifi.dbs.elki.visualization.style.marker.MarkerLibrary;
import de.lmu.ifi.dbs.elki.visualization.svg.SVGPlot;
@@ -42,8 +44,6 @@ import de.lmu.ifi.dbs.elki.visualization.svg.SVGUtil;
import de.lmu.ifi.dbs.elki.visualization.visualizers.AbstractVisFactory;
import de.lmu.ifi.dbs.elki.visualization.visualizers.StaticVisualization;
import de.lmu.ifi.dbs.elki.visualization.visualizers.Visualization;
-import de.lmu.ifi.dbs.elki.visualization.visualizers.VisualizationTask;
-import de.lmu.ifi.dbs.elki.visualization.visualizers.VisualizerContext;
/**
* Pseudo-Visualizer, that gives the key for a clustering.
@@ -106,7 +106,9 @@ public class KeyVisFactory extends AbstractVisFactory {
Collection<Clustering<?>> clusterings = ResultUtil.filterResults(newResult, Clustering.class);
for(Clustering<?> c : clusterings) {
if(c.getAllClusters().size() > 0) {
- final VisualizationTask task = new VisualizationTask(NAME, c, null, this, null);
+ final VisualizationTask task = new VisualizationTask(NAME, c, null, this);
+ task.width = 1.0;
+ task.height = 1.0;
task.put(VisualizationTask.META_LEVEL, VisualizationTask.LEVEL_STATIC);
baseResult.getHierarchy().add(c, task);
}
@@ -117,9 +119,4 @@ public class KeyVisFactory extends AbstractVisFactory {
public boolean allowThumbnails(@SuppressWarnings("unused") VisualizationTask task) {
return false;
}
-
- @Override
- public Class<? extends Projection> getProjectionType() {
- return null;
- }
} \ No newline at end of file
diff --git a/src/de/lmu/ifi/dbs/elki/visualization/visualizers/visunproj/LabelVisFactory.java b/src/de/lmu/ifi/dbs/elki/visualization/visualizers/visunproj/LabelVisFactory.java
index a10b1b09..6145b7a8 100644
--- a/src/de/lmu/ifi/dbs/elki/visualization/visualizers/visunproj/LabelVisFactory.java
+++ b/src/de/lmu/ifi/dbs/elki/visualization/visualizers/visunproj/LabelVisFactory.java
@@ -1,46 +1,46 @@
package de.lmu.ifi.dbs.elki.visualization.visualizers.visunproj;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import org.apache.batik.util.SVGConstants;
import org.w3c.dom.Element;
import de.lmu.ifi.dbs.elki.result.HierarchicalResult;
import de.lmu.ifi.dbs.elki.result.Result;
+import de.lmu.ifi.dbs.elki.visualization.VisualizationTask;
+import de.lmu.ifi.dbs.elki.visualization.VisualizerContext;
import de.lmu.ifi.dbs.elki.visualization.css.CSSClass;
-import de.lmu.ifi.dbs.elki.visualization.projections.Projection;
import de.lmu.ifi.dbs.elki.visualization.style.StyleLibrary;
import de.lmu.ifi.dbs.elki.visualization.svg.SVGPlot;
import de.lmu.ifi.dbs.elki.visualization.svg.SVGUtil;
import de.lmu.ifi.dbs.elki.visualization.visualizers.AbstractVisFactory;
import de.lmu.ifi.dbs.elki.visualization.visualizers.StaticVisualization;
import de.lmu.ifi.dbs.elki.visualization.visualizers.Visualization;
-import de.lmu.ifi.dbs.elki.visualization.visualizers.VisualizationTask;
-import de.lmu.ifi.dbs.elki.visualization.visualizers.VisualizerContext;
/**
- * Trivial "visualizer" that displays a static label.
- * The visualizer is meant to be used for dimension labels in the overview.
+ * Trivial "visualizer" that displays a static label. The visualizer is meant to
+ * be used for dimension labels in the overview.
*
* @author Erich Schubert
*
@@ -54,7 +54,12 @@ public class LabelVisFactory extends AbstractVisFactory {
private String label = "undefined";
/**
- * Formal constructor, to satisfy Parameterizable API
+ * Flag to indicate rotated labels (90 deg to the left)
+ */
+ private boolean rotated = false;
+
+ /**
+ * Constructor. Solely for API purposes (Parameterizable!)
*/
public LabelVisFactory() {
super();
@@ -66,11 +71,21 @@ public class LabelVisFactory extends AbstractVisFactory {
* @param label Label to use
*/
public LabelVisFactory(String label) {
- this();
+ this(label, false);
+ }
+
+ /**
+ * Constructor.
+ *
+ * @param label Label to use
+ * @param rotated Rotated 90 deg to the left
+ */
+ public LabelVisFactory(String label, boolean rotated) {
+ super();
this.label = label;
+ this.rotated = rotated;
}
- @SuppressWarnings("unused")
@Override
public void processNewResult(HierarchicalResult baseResult, Result newResult) {
// No auto discovery supported.
@@ -87,19 +102,23 @@ public class LabelVisFactory extends AbstractVisFactory {
cls.setStatement(SVGConstants.CSS_FILL_PROPERTY, style.getTextColor("overview.labels"));
cls.setStatement(SVGConstants.CSS_FONT_FAMILY_PROPERTY, style.getFontFamily("overview.labels"));
- Element layer = svgp.svgText(task.getWidth() / 2, task.getHeight() / 2 + .35 * fontsize, this.label);
- SVGUtil.setAtt(layer, SVGConstants.SVG_STYLE_ATTRIBUTE, cls.inlineCSS());
- SVGUtil.setAtt(layer, SVGConstants.SVG_TEXT_ANCHOR_ATTRIBUTE, SVGConstants.SVG_MIDDLE_VALUE);
+ Element layer;
+ if(!rotated) {
+ layer = svgp.svgText(task.getWidth() / 2, task.getHeight() / 2 + .35 * fontsize, this.label);
+ SVGUtil.setAtt(layer, SVGConstants.SVG_STYLE_ATTRIBUTE, cls.inlineCSS());
+ SVGUtil.setAtt(layer, SVGConstants.SVG_TEXT_ANCHOR_ATTRIBUTE, SVGConstants.SVG_MIDDLE_VALUE);
+ }
+ else {
+ layer = svgp.svgText(- task.getHeight() / 2, task.getWidth() / 2 + .35 * fontsize, this.label);
+ SVGUtil.setAtt(layer, SVGConstants.SVG_STYLE_ATTRIBUTE, cls.inlineCSS());
+ SVGUtil.setAtt(layer, SVGConstants.SVG_TEXT_ANCHOR_ATTRIBUTE, SVGConstants.SVG_MIDDLE_VALUE);
+ SVGUtil.setAtt(layer, SVGConstants.SVG_TRANSFORM_ATTRIBUTE, "rotate(-90)");
+ }
return new StaticVisualization(task, layer);
}
@Override
- public boolean allowThumbnails(@SuppressWarnings("unused") VisualizationTask task) {
+ public boolean allowThumbnails(VisualizationTask task) {
return false;
}
-
- @Override
- public Class<? extends Projection> getProjectionType() {
- return null;
- }
} \ No newline at end of file
diff --git a/src/de/lmu/ifi/dbs/elki/visualization/visualizers/visunproj/OPTICSClusterVisualization.java b/src/de/lmu/ifi/dbs/elki/visualization/visualizers/visunproj/OPTICSClusterVisualization.java
deleted file mode 100644
index 666d4518..00000000
--- a/src/de/lmu/ifi/dbs/elki/visualization/visualizers/visunproj/OPTICSClusterVisualization.java
+++ /dev/null
@@ -1,240 +0,0 @@
-package de.lmu.ifi.dbs.elki.visualization.visualizers.visunproj;
-/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
-
-import java.util.Collection;
-import java.util.List;
-
-import org.apache.batik.util.SVGConstants;
-import org.w3c.dom.Element;
-
-import de.lmu.ifi.dbs.elki.data.Cluster;
-import de.lmu.ifi.dbs.elki.data.Clustering;
-import de.lmu.ifi.dbs.elki.data.model.OPTICSModel;
-import de.lmu.ifi.dbs.elki.logging.Logging;
-import de.lmu.ifi.dbs.elki.result.HierarchicalResult;
-import de.lmu.ifi.dbs.elki.result.Result;
-import de.lmu.ifi.dbs.elki.result.ResultUtil;
-import de.lmu.ifi.dbs.elki.result.SelectionResult;
-import de.lmu.ifi.dbs.elki.result.optics.ClusterOrderResult;
-import de.lmu.ifi.dbs.elki.visualization.css.CSSClass;
-import de.lmu.ifi.dbs.elki.visualization.opticsplot.OPTICSPlot;
-import de.lmu.ifi.dbs.elki.visualization.projections.Projection;
-import de.lmu.ifi.dbs.elki.visualization.style.StyleLibrary;
-import de.lmu.ifi.dbs.elki.visualization.svg.SVGUtil;
-import de.lmu.ifi.dbs.elki.visualization.visualizers.AbstractVisFactory;
-import de.lmu.ifi.dbs.elki.visualization.visualizers.AbstractVisualization;
-import de.lmu.ifi.dbs.elki.visualization.visualizers.Visualization;
-import de.lmu.ifi.dbs.elki.visualization.visualizers.VisualizationTask;
-
-/**
- * Visualize the clusters and cluster hierarchy found by OPTICS on the OPTICS
- * Plot.
- *
- * @author Erich Schubert
- *
- * @apiviz.uses ClusterOrderResult
- * @apiviz.uses OPTICSPlot
- */
-public class OPTICSClusterVisualization extends AbstractVisualization {
- /**
- * The logger for this class.
- */
- private static final Logging logger = Logging.getLogger(OPTICSClusterVisualization.class);
-
- /**
- * A short name characterizing this Visualizer.
- */
- private static final String NAME = "OPTICS Cluster Range";
-
- /**
- * CSS class for markers
- */
- protected static final String CSS_BRACKET = "opticsBracket";
-
- /**
- * Our cluster order
- */
- private ClusterOrderResult<?> co;
-
- /**
- * Our clustering
- */
- Clustering<OPTICSModel> clus;
-
- /**
- * The plot
- */
- private OPTICSPlot<?> opticsplot;
-
- /**
- * Constructor.
- *
- * @param task Visualization task
- */
- public OPTICSClusterVisualization(VisualizationTask task) {
- super(task);
- this.co = task.getResult();
- this.clus = findOPTICSClustering(this.co);
- this.opticsplot = OPTICSPlot.plotForClusterOrder(this.co, context);
- context.addResultListener(this);
- incrementalRedraw();
- }
-
- /**
- * Find the OPTICS clustering child of a cluster order.
- *
- * @param co Cluster order
- * @return OPTICS clustering
- */
- @SuppressWarnings("unchecked")
- protected static Clustering<OPTICSModel> findOPTICSClustering(ClusterOrderResult<?> co) {
- for(Result r : co.getHierarchy().getChildren(co)) {
- if(!Clustering.class.isInstance(r)) {
- continue;
- }
- Clustering<?> clus = (Clustering<?>) r;
- if(clus.getToplevelClusters().size() == 0) {
- continue;
- }
- Cluster<?> firstcluster = clus.getToplevelClusters().iterator().next();
- if(firstcluster.getModel() instanceof OPTICSModel) {
- return (Clustering<OPTICSModel>) clus;
- }
- }
- return null;
- }
-
- @Override
- protected void redraw() {
- final double scale = StyleLibrary.SCALE;
- final double sizex = scale;
- final double sizey = scale * task.getHeight() / task.getWidth();
- final double margin = context.getStyleLibrary().getSize(StyleLibrary.MARGIN);
- layer = SVGUtil.svgElement(svgp.getDocument(), SVGConstants.SVG_G_TAG);
- final String transform = SVGUtil.makeMarginTransform(task.getWidth(), task.getHeight(), sizex, sizey, margin);
- SVGUtil.setAtt(layer, SVGConstants.SVG_TRANSFORM_ATTRIBUTE, transform);
-
- addCSSClasses();
-
- drawClusters(scale, scale / opticsplot.getRatio(), clus.getToplevelClusters(), 1);
- }
-
- /**
- * Recursively draw clusters
- *
- * @param sizex Width
- * @param sizey Height of optics plot
- * @param clusters Current set of clusters
- * @param depth Recursion depth
- */
- private void drawClusters(double sizex, double sizey, List<Cluster<OPTICSModel>> clusters, int depth) {
- final double scale = StyleLibrary.SCALE;
- for(Cluster<OPTICSModel> cluster : clusters) {
- try {
- OPTICSModel model = cluster.getModel();
- final double x1 = sizex * ((model.getStartIndex() + .25) / this.co.getClusterOrder().size());
- final double x2 = sizex * ((model.getEndIndex() + .75) / this.co.getClusterOrder().size());
- final double y = sizey + depth * scale * 0.01;
- Element e = svgp.svgLine(x1, y, x2, y);
- SVGUtil.addCSSClass(e, CSS_BRACKET);
- layer.appendChild(e);
- }
- catch(ClassCastException e) {
- logger.warning("Expected OPTICSModel, got: " + cluster.getModel().getClass().getSimpleName());
- }
- // Descend
- final List<Cluster<OPTICSModel>> children = cluster.getChildren();
- if(children != null) {
- drawClusters(sizex, sizey, children, depth + 1);
- }
- }
- }
-
- /**
- * Adds the required CSS-Classes
- */
- private void addCSSClasses() {
- // Class for the markers
- if(!svgp.getCSSClassManager().contains(CSS_BRACKET)) {
- final CSSClass cls = new CSSClass(this, CSS_BRACKET);
- cls.setStatement(SVGConstants.CSS_STROKE_PROPERTY, context.getStyleLibrary().getColor(StyleLibrary.PLOT));
- cls.setStatement(SVGConstants.CSS_STROKE_WIDTH_PROPERTY, context.getStyleLibrary().getLineWidth(StyleLibrary.PLOT));
- svgp.addCSSClassOrLogError(cls);
- }
- }
-
- @Override
- public void resultChanged(Result current) {
- if(current instanceof SelectionResult || current == co || current == opticsplot) {
- synchronizedRedraw();
- return;
- }
- super.resultChanged(current);
- }
-
- /**
- * Factory class for OPTICS plot selections.
- *
- * @author Erich Schubert
- *
- * @apiviz.stereotype factory
- * @apiviz.uses OPTICSPlotSelectionVisualization oneway - - «create»
- */
- public static class Factory extends AbstractVisFactory {
- /**
- * Constructor, adhering to
- * {@link de.lmu.ifi.dbs.elki.utilities.optionhandling.Parameterizable}
- */
- public Factory() {
- super();
- }
-
- @Override
- public void processNewResult(HierarchicalResult baseResult, Result result) {
- Collection<OPTICSPlot<?>> plots = ResultUtil.filterResults(result, OPTICSPlot.class);
- for(OPTICSPlot<?> plot : plots) {
- ClusterOrderResult<?> co = plot.getClusterOrder();
- final VisualizationTask task = new VisualizationTask(NAME, co, null, this, plot);
- task.put(VisualizationTask.META_LEVEL, VisualizationTask.LEVEL_INTERACTIVE);
- baseResult.getHierarchy().add(plot, task);
- }
- }
-
- @Override
- public Visualization makeVisualization(VisualizationTask task) {
- return new OPTICSClusterVisualization(task);
- }
-
- @Override
- public boolean allowThumbnails(@SuppressWarnings("unused") VisualizationTask task) {
- // Don't use thumbnails
- return false;
- }
-
- @Override
- public Class<? extends Projection> getProjectionType() {
- return null;
- }
- }
-} \ No newline at end of file
diff --git a/src/de/lmu/ifi/dbs/elki/visualization/visualizers/visunproj/OPTICSPlotVisualizer.java b/src/de/lmu/ifi/dbs/elki/visualization/visualizers/visunproj/OPTICSPlotVisualizer.java
deleted file mode 100644
index d1bbddfb..00000000
--- a/src/de/lmu/ifi/dbs/elki/visualization/visualizers/visunproj/OPTICSPlotVisualizer.java
+++ /dev/null
@@ -1,170 +0,0 @@
-package de.lmu.ifi.dbs.elki.visualization.visualizers.visunproj;
-/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
-
-import java.io.File;
-import java.io.IOException;
-import java.util.Collection;
-
-import org.apache.batik.util.SVGConstants;
-import org.w3c.dom.Element;
-
-import de.lmu.ifi.dbs.elki.distance.distancevalue.Distance;
-import de.lmu.ifi.dbs.elki.distance.distancevalue.DoubleDistance;
-import de.lmu.ifi.dbs.elki.logging.LoggingUtil;
-import de.lmu.ifi.dbs.elki.result.HierarchicalResult;
-import de.lmu.ifi.dbs.elki.result.Result;
-import de.lmu.ifi.dbs.elki.result.ResultUtil;
-import de.lmu.ifi.dbs.elki.result.optics.ClusterOrderResult;
-import de.lmu.ifi.dbs.elki.visualization.css.CSSClassManager.CSSNamingConflict;
-import de.lmu.ifi.dbs.elki.visualization.opticsplot.OPTICSPlot;
-import de.lmu.ifi.dbs.elki.visualization.projections.Projection;
-import de.lmu.ifi.dbs.elki.visualization.style.StyleLibrary;
-import de.lmu.ifi.dbs.elki.visualization.svg.SVGSimpleLinearAxis;
-import de.lmu.ifi.dbs.elki.visualization.svg.SVGUtil;
-import de.lmu.ifi.dbs.elki.visualization.visualizers.AbstractVisFactory;
-import de.lmu.ifi.dbs.elki.visualization.visualizers.AbstractVisualization;
-import de.lmu.ifi.dbs.elki.visualization.visualizers.Visualization;
-import de.lmu.ifi.dbs.elki.visualization.visualizers.VisualizationTask;
-import de.lmu.ifi.dbs.elki.visualization.visualizers.VisualizerContext;
-import de.lmu.ifi.dbs.elki.visualization.visualizers.VisualizerUtil;
-
-/**
- * Visualize an OPTICS result by constructing an OPTICS plot for it.
- *
- * @author Erich Schubert
- *
- * @apiviz.has OPTICSPlot oneway - 1 visualizes
- * @apiviz.has ClusterOrderResult oneway - 1 visualizes
- *
- * @param <D> Distance type
- */
-public class OPTICSPlotVisualizer<D extends Distance<D>> extends AbstractVisualization {
- /**
- * Name for this visualizer.
- */
- private static final String NAME = "OPTICS Plot";
-
- /**
- * The actual plot object.
- */
- private OPTICSPlot<D> opticsplot;
-
- /**
- * The image we generated.
- */
- private File imgfile;
-
- public OPTICSPlotVisualizer(VisualizationTask task) {
- super(task);
- this.opticsplot = task.getResult();
- }
-
- @Override
- protected void redraw() {
- // TODO: Use width, height, imgratio, number of OPTICS plots!
- double scale = StyleLibrary.SCALE;
- final double sizex = scale;
- final double sizey = scale * task.getHeight() / task.getWidth();
- final double margin = context.getStyleLibrary().getSize(StyleLibrary.MARGIN);
- layer = SVGUtil.svgElement(svgp.getDocument(), SVGConstants.SVG_G_TAG);
- final String transform = SVGUtil.makeMarginTransform(task.getWidth(), task.getHeight(), sizex, sizey, margin);
- SVGUtil.setAtt(layer, SVGConstants.SVG_TRANSFORM_ATTRIBUTE, transform);
-
- if(imgfile == null) {
- try {
- imgfile = opticsplot.getAsTempFile();
- }
- catch(IOException e) {
- LoggingUtil.exception("Could not generate OPTICS plot.", e);
- }
- }
-
- Element itag = svgp.svgElement(SVGConstants.SVG_IMAGE_TAG);
- SVGUtil.setAtt(itag, SVGConstants.SVG_IMAGE_RENDERING_ATTRIBUTE, SVGConstants.SVG_OPTIMIZE_SPEED_VALUE);
- SVGUtil.setAtt(itag, SVGConstants.SVG_X_ATTRIBUTE, 0);
- SVGUtil.setAtt(itag, SVGConstants.SVG_Y_ATTRIBUTE, 0);
- SVGUtil.setAtt(itag, SVGConstants.SVG_WIDTH_ATTRIBUTE, scale);
- SVGUtil.setAtt(itag, SVGConstants.SVG_HEIGHT_ATTRIBUTE, scale / opticsplot.getRatio());
- itag.setAttributeNS(SVGConstants.XLINK_NAMESPACE_URI, SVGConstants.XLINK_HREF_QNAME, imgfile.toURI().toString());
-
- layer.appendChild(itag);
-
- try {
- SVGSimpleLinearAxis.drawAxis(svgp, layer, opticsplot.getScale(), 0, scale / opticsplot.getRatio(), 0, 0, true, false, context.getStyleLibrary());
- SVGSimpleLinearAxis.drawAxis(svgp, layer, opticsplot.getScale(), scale, scale / opticsplot.getRatio(), scale, 0, true, true, context.getStyleLibrary());
- }
- catch(CSSNamingConflict e) {
- LoggingUtil.exception("CSS naming conflict for axes on OPTICS plot", e);
- }
- }
-
- /**
- * Factory class for OPTICS plot.
- *
- * @author Erich Schubert
- *
- * @apiviz.stereotype factory
- * @apiviz.uses OPTICSPlotVisualizer oneway - - «create»
- */
- public static class Factory extends AbstractVisFactory {
- /**
- * Constructor, adhering to
- * {@link de.lmu.ifi.dbs.elki.utilities.optionhandling.Parameterizable}
- */
- public Factory() {
- super();
- }
-
- @Override
- public void processNewResult(HierarchicalResult baseResult, Result result) {
- VisualizerContext context = VisualizerUtil.getContext(baseResult);
- Collection<ClusterOrderResult<?>> cos = ResultUtil.filterResults(result, ClusterOrderResult.class);
- for(ClusterOrderResult<?> co : cos) {
- // Add plots, attach visualizer
- OPTICSPlot<?> plot = OPTICSPlot.plotForClusterOrder(co, context);
- if(plot != null) {
- final VisualizationTask task = new VisualizationTask(NAME, plot, null, this, plot);
- task.put(VisualizationTask.META_LEVEL, VisualizationTask.LEVEL_STATIC);
- baseResult.getHierarchy().add(plot, task);
- }
- }
- }
-
- @Override
- public Visualization makeVisualization(VisualizationTask task) {
- return new OPTICSPlotVisualizer<DoubleDistance>(task);
- }
-
- @Override
- public boolean allowThumbnails(@SuppressWarnings("unused") VisualizationTask task) {
- // Don't use thumbnails
- return false;
- }
-
- @Override
- public Class<? extends Projection> getProjectionType() {
- return null;
- }
- }
-} \ No newline at end of file
diff --git a/src/de/lmu/ifi/dbs/elki/visualization/visualizers/visunproj/PixmapVisualizer.java b/src/de/lmu/ifi/dbs/elki/visualization/visualizers/visunproj/PixmapVisualizer.java
index 8667c2d4..06268dac 100644
--- a/src/de/lmu/ifi/dbs/elki/visualization/visualizers/visunproj/PixmapVisualizer.java
+++ b/src/de/lmu/ifi/dbs/elki/visualization/visualizers/visunproj/PixmapVisualizer.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.visualization.visualizers.visunproj;
-/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.awt.image.RenderedImage;
import java.util.Collection;
@@ -32,13 +33,12 @@ import de.lmu.ifi.dbs.elki.result.HierarchicalResult;
import de.lmu.ifi.dbs.elki.result.PixmapResult;
import de.lmu.ifi.dbs.elki.result.Result;
import de.lmu.ifi.dbs.elki.result.ResultUtil;
-import de.lmu.ifi.dbs.elki.visualization.projections.Projection;
+import de.lmu.ifi.dbs.elki.visualization.VisualizationTask;
import de.lmu.ifi.dbs.elki.visualization.style.StyleLibrary;
import de.lmu.ifi.dbs.elki.visualization.svg.SVGUtil;
import de.lmu.ifi.dbs.elki.visualization.visualizers.AbstractVisFactory;
import de.lmu.ifi.dbs.elki.visualization.visualizers.AbstractVisualization;
import de.lmu.ifi.dbs.elki.visualization.visualizers.Visualization;
-import de.lmu.ifi.dbs.elki.visualization.visualizers.VisualizationTask;
/**
* Visualize an arbitrary pixmap result.
@@ -121,7 +121,9 @@ public class PixmapVisualizer extends AbstractVisualization {
Collection<PixmapResult> prs = ResultUtil.filterResults(result, PixmapResult.class);
for(PixmapResult pr : prs) {
// Add plots, attach visualizer
- final VisualizationTask task = new VisualizationTask(NAME, pr, null, this, null);
+ final VisualizationTask task = new VisualizationTask(NAME, pr, null, this);
+ task.width = pr.getImage().getWidth() / pr.getImage().getHeight();
+ task.height = 1.0;
task.put(VisualizationTask.META_LEVEL, VisualizationTask.LEVEL_STATIC);
baseResult.getHierarchy().add(pr, task);
}
@@ -137,10 +139,5 @@ public class PixmapVisualizer extends AbstractVisualization {
// Don't use thumbnails
return false;
}
-
- @Override
- public Class<? extends Projection> getProjectionType() {
- return null;
- }
}
} \ No newline at end of file
diff --git a/src/de/lmu/ifi/dbs/elki/visualization/visualizers/visunproj/SettingsVisFactory.java b/src/de/lmu/ifi/dbs/elki/visualization/visualizers/visunproj/SettingsVisFactory.java
index 9a62001e..9be580f7 100644
--- a/src/de/lmu/ifi/dbs/elki/visualization/visualizers/visunproj/SettingsVisFactory.java
+++ b/src/de/lmu/ifi/dbs/elki/visualization/visualizers/visunproj/SettingsVisFactory.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.visualization.visualizers.visunproj;
-/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.Collection;
@@ -35,15 +36,14 @@ import de.lmu.ifi.dbs.elki.utilities.iterator.IterableIterator;
import de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters.ClassParameter;
import de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters.Parameter;
import de.lmu.ifi.dbs.elki.utilities.pairs.Pair;
-import de.lmu.ifi.dbs.elki.visualization.projections.Projection;
+import de.lmu.ifi.dbs.elki.visualization.VisualizationTask;
+import de.lmu.ifi.dbs.elki.visualization.VisualizerContext;
import de.lmu.ifi.dbs.elki.visualization.style.StyleLibrary;
import de.lmu.ifi.dbs.elki.visualization.svg.SVGPlot;
import de.lmu.ifi.dbs.elki.visualization.svg.SVGUtil;
import de.lmu.ifi.dbs.elki.visualization.visualizers.AbstractVisFactory;
import de.lmu.ifi.dbs.elki.visualization.visualizers.StaticVisualization;
import de.lmu.ifi.dbs.elki.visualization.visualizers.Visualization;
-import de.lmu.ifi.dbs.elki.visualization.visualizers.VisualizationTask;
-import de.lmu.ifi.dbs.elki.visualization.visualizers.VisualizerContext;
/**
* Pseudo-Visualizer, that lists the settings of the algorithm-
@@ -140,7 +140,9 @@ public class SettingsVisFactory extends AbstractVisFactory {
public void processNewResult(HierarchicalResult baseResult, Result newResult) {
final IterableIterator<SettingsResult> settingsResults = ResultUtil.filteredResults(newResult, SettingsResult.class);
for(SettingsResult sr : settingsResults) {
- final VisualizationTask task = new VisualizationTask(NAME, sr, null, this, null);
+ final VisualizationTask task = new VisualizationTask(NAME, sr, null, this);
+ task.width = 1.0;
+ task.height = 1.0;
task.put(VisualizationTask.META_LEVEL, VisualizationTask.LEVEL_STATIC);
baseResult.getHierarchy().add(sr, task);
}
@@ -150,9 +152,4 @@ public class SettingsVisFactory extends AbstractVisFactory {
public boolean allowThumbnails(@SuppressWarnings("unused") VisualizationTask task) {
return false;
}
-
- @Override
- public Class<? extends Projection> getProjectionType() {
- return null;
- }
} \ No newline at end of file
diff --git a/src/de/lmu/ifi/dbs/elki/visualization/visualizers/visunproj/SimilarityMatrixVisualizer.java b/src/de/lmu/ifi/dbs/elki/visualization/visualizers/visunproj/SimilarityMatrixVisualizer.java
index c7a64d54..f9b1ef52 100644
--- a/src/de/lmu/ifi/dbs/elki/visualization/visualizers/visunproj/SimilarityMatrixVisualizer.java
+++ b/src/de/lmu/ifi/dbs/elki/visualization/visualizers/visunproj/SimilarityMatrixVisualizer.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.visualization.visualizers.visunproj;
-/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.awt.image.RenderedImage;
import java.util.Collection;
@@ -36,13 +37,12 @@ import de.lmu.ifi.dbs.elki.result.HierarchicalResult;
import de.lmu.ifi.dbs.elki.result.Result;
import de.lmu.ifi.dbs.elki.result.ResultUtil;
import de.lmu.ifi.dbs.elki.utilities.DatabaseUtil;
-import de.lmu.ifi.dbs.elki.visualization.projections.Projection;
+import de.lmu.ifi.dbs.elki.visualization.VisualizationTask;
import de.lmu.ifi.dbs.elki.visualization.style.StyleLibrary;
import de.lmu.ifi.dbs.elki.visualization.svg.SVGUtil;
import de.lmu.ifi.dbs.elki.visualization.visualizers.AbstractVisFactory;
import de.lmu.ifi.dbs.elki.visualization.visualizers.AbstractVisualization;
import de.lmu.ifi.dbs.elki.visualization.visualizers.Visualization;
-import de.lmu.ifi.dbs.elki.visualization.visualizers.VisualizationTask;
/**
* Visualize a similarity matrix with object labels
@@ -149,7 +149,9 @@ public class SimilarityMatrixVisualizer extends AbstractVisualization {
Collection<ComputeSimilarityMatrixImage.SimilarityMatrix> prs = ResultUtil.filterResults(result, ComputeSimilarityMatrixImage.SimilarityMatrix.class);
for(ComputeSimilarityMatrixImage.SimilarityMatrix pr : prs) {
// Add plots, attach visualizer
- final VisualizationTask task = new VisualizationTask(NAME, pr, null, this, null);
+ final VisualizationTask task = new VisualizationTask(NAME, pr, null, this);
+ task.width = 1.0;
+ task.height = 1.0;
task.put(VisualizationTask.META_LEVEL, VisualizationTask.LEVEL_STATIC);
baseResult.getHierarchy().add(pr, task);
}
@@ -165,10 +167,5 @@ public class SimilarityMatrixVisualizer extends AbstractVisualization {
// Don't use thumbnails
return false;
}
-
- @Override
- public Class<? extends Projection> getProjectionType() {
- return null;
- }
}
} \ No newline at end of file
diff --git a/src/de/lmu/ifi/dbs/elki/workflow/AlgorithmStep.java b/src/de/lmu/ifi/dbs/elki/workflow/AlgorithmStep.java
index 0ad31a4b..f212d818 100644
--- a/src/de/lmu/ifi/dbs/elki/workflow/AlgorithmStep.java
+++ b/src/de/lmu/ifi/dbs/elki/workflow/AlgorithmStep.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.workflow;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.List;
diff --git a/src/de/lmu/ifi/dbs/elki/workflow/EvaluationStep.java b/src/de/lmu/ifi/dbs/elki/workflow/EvaluationStep.java
index b797da32..50081404 100644
--- a/src/de/lmu/ifi/dbs/elki/workflow/EvaluationStep.java
+++ b/src/de/lmu/ifi/dbs/elki/workflow/EvaluationStep.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.workflow;
-/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
-
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
-
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.List;
@@ -116,18 +117,16 @@ public class EvaluationStep implements WorkflowStep {
}
@Override
- public void resultAdded(Result child, @SuppressWarnings("unused") Result parent) {
+ public void resultAdded(Result child, Result parent) {
// Re-run evaluators on result
update(child);
}
- @SuppressWarnings("unused")
@Override
public void resultChanged(Result current) {
// Ignore for now. TODO: re-evaluate?
}
- @SuppressWarnings("unused")
@Override
public void resultRemoved(Result child, Result parent) {
// TODO: Implement
diff --git a/src/de/lmu/ifi/dbs/elki/workflow/InputStep.java b/src/de/lmu/ifi/dbs/elki/workflow/InputStep.java
index 772b9716..bdd60126 100644
--- a/src/de/lmu/ifi/dbs/elki/workflow/InputStep.java
+++ b/src/de/lmu/ifi/dbs/elki/workflow/InputStep.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.workflow;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.database.Database;
import de.lmu.ifi.dbs.elki.database.StaticArrayDatabase;
diff --git a/src/de/lmu/ifi/dbs/elki/workflow/LoggingStep.java b/src/de/lmu/ifi/dbs/elki/workflow/LoggingStep.java
index 5e72e173..5e1b1327 100644
--- a/src/de/lmu/ifi/dbs/elki/workflow/LoggingStep.java
+++ b/src/de/lmu/ifi/dbs/elki/workflow/LoggingStep.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.workflow;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.logging.Level;
diff --git a/src/de/lmu/ifi/dbs/elki/workflow/OutputStep.java b/src/de/lmu/ifi/dbs/elki/workflow/OutputStep.java
index b947e492..a910245b 100644
--- a/src/de/lmu/ifi/dbs/elki/workflow/OutputStep.java
+++ b/src/de/lmu/ifi/dbs/elki/workflow/OutputStep.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.workflow;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import java.util.ArrayList;
import java.util.List;
diff --git a/src/de/lmu/ifi/dbs/elki/workflow/WorkflowStep.java b/src/de/lmu/ifi/dbs/elki/workflow/WorkflowStep.java
index 9cebc7b1..f27f5b5b 100644
--- a/src/de/lmu/ifi/dbs/elki/workflow/WorkflowStep.java
+++ b/src/de/lmu/ifi/dbs/elki/workflow/WorkflowStep.java
@@ -1,26 +1,27 @@
package de.lmu.ifi.dbs.elki.workflow;
+
/*
-This file is part of ELKI:
-Environment for Developing KDD-Applications Supported by Index-Structures
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
-Copyright (C) 2011
-Ludwig-Maximilians-Universität München
-Lehr- und Forschungseinheit für Datenbanksysteme
-ELKI Development Team
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU Affero General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU Affero General Public License for more details.
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
-You should have received a copy of the GNU Affero General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
import de.lmu.ifi.dbs.elki.utilities.optionhandling.Parameterizable;
diff --git a/test/de/lmu/ifi/dbs/elki/AllTests.java b/test/de/lmu/ifi/dbs/elki/AllTests.java
index 388ad193..cc0e1af6 100644
--- a/test/de/lmu/ifi/dbs/elki/AllTests.java
+++ b/test/de/lmu/ifi/dbs/elki/AllTests.java
@@ -1,5 +1,28 @@
package de.lmu.ifi.dbs.elki;
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
+
import java.util.List;
import junit.framework.JUnit4TestAdapter;
@@ -24,7 +47,7 @@ public class AllTests extends TestSuite {
List<Class<?>> tests = InspectionUtil.findAllImplementations(TestCase.class, false);
tests.addAll(InspectionUtil.findAllImplementations(JUnit4Test.class, false));
for(Class<?> cls : tests) {
- if (cls == AllTests.class) {
+ if(cls == AllTests.class) {
continue;
}
Test test = new JUnit4TestAdapter(cls);
diff --git a/test/de/lmu/ifi/dbs/elki/JUnit4Test.java b/test/de/lmu/ifi/dbs/elki/JUnit4Test.java
index 0a8126ba..023d0905 100644
--- a/test/de/lmu/ifi/dbs/elki/JUnit4Test.java
+++ b/test/de/lmu/ifi/dbs/elki/JUnit4Test.java
@@ -1,5 +1,28 @@
package de.lmu.ifi.dbs.elki;
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
+
import org.junit.runner.RunWith;
import org.junit.runners.JUnit4;
diff --git a/test/de/lmu/ifi/dbs/elki/algorithm/AbstractSimpleAlgorithmTest.java b/test/de/lmu/ifi/dbs/elki/algorithm/AbstractSimpleAlgorithmTest.java
index f17f9ebf..894a314f 100644
--- a/test/de/lmu/ifi/dbs/elki/algorithm/AbstractSimpleAlgorithmTest.java
+++ b/test/de/lmu/ifi/dbs/elki/algorithm/AbstractSimpleAlgorithmTest.java
@@ -1,5 +1,28 @@
package de.lmu.ifi.dbs.elki.algorithm;
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
+
import static org.junit.Assert.assertTrue;
import static org.junit.Assert.fail;
@@ -76,11 +99,11 @@ public abstract class AbstractSimpleAlgorithmTest {
protected <T> Database makeSimpleDatabase(String filename, int expectedSize, ListParameterization params, Class<?>[] filters) {
org.junit.Assert.assertTrue("Test data set not found: " + filename, (new File(filename)).exists());
params.addParameter(FileBasedDatabaseConnection.INPUT_ID, filename);
-
+
List<Class<?>> filterlist = new ArrayList<Class<?>>();
filterlist.add(FixedDBIDsFilter.class);
- if (filters != null) {
- for (Class<?> filter : filters) {
+ if(filters != null) {
+ for(Class<?> filter : filters) {
filterlist.add(filter);
}
}
diff --git a/test/de/lmu/ifi/dbs/elki/algorithm/TestKNNJoin.java b/test/de/lmu/ifi/dbs/elki/algorithm/TestKNNJoin.java
index c2d7f650..fa5dbc14 100644
--- a/test/de/lmu/ifi/dbs/elki/algorithm/TestKNNJoin.java
+++ b/test/de/lmu/ifi/dbs/elki/algorithm/TestKNNJoin.java
@@ -1,5 +1,28 @@
package de.lmu.ifi.dbs.elki.algorithm;
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
+
import java.util.Arrays;
import java.util.List;
@@ -99,7 +122,7 @@ public class TestKNNJoin implements JUnit4Test {
org.junit.Assert.assertEquals("Manhattan variance 2NN", var2nnManhattan, meansize.getSampleVariance(), 0.00001);
}
}
-
+
/**
* Test {@link RStarTree} using a file based database connection.
*
diff --git a/test/de/lmu/ifi/dbs/elki/algorithm/clustering/TestDBSCANResults.java b/test/de/lmu/ifi/dbs/elki/algorithm/clustering/TestDBSCANResults.java
index e953024e..025a6f4f 100644
--- a/test/de/lmu/ifi/dbs/elki/algorithm/clustering/TestDBSCANResults.java
+++ b/test/de/lmu/ifi/dbs/elki/algorithm/clustering/TestDBSCANResults.java
@@ -1,5 +1,28 @@
package de.lmu.ifi.dbs.elki.algorithm.clustering;
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
+
import org.junit.Test;
import de.lmu.ifi.dbs.elki.JUnit4Test;
diff --git a/test/de/lmu/ifi/dbs/elki/algorithm/clustering/TestDeLiCluResults.java b/test/de/lmu/ifi/dbs/elki/algorithm/clustering/TestDeLiCluResults.java
index 0c02f6e2..9fc898f6 100644
--- a/test/de/lmu/ifi/dbs/elki/algorithm/clustering/TestDeLiCluResults.java
+++ b/test/de/lmu/ifi/dbs/elki/algorithm/clustering/TestDeLiCluResults.java
@@ -1,5 +1,28 @@
package de.lmu.ifi.dbs.elki.algorithm.clustering;
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
+
import org.junit.Test;
import de.lmu.ifi.dbs.elki.JUnit4Test;
@@ -36,7 +59,7 @@ public class TestDeLiCluResults extends AbstractSimpleAlgorithmTest implements J
indexparams.addParameter(StaticArrayDatabase.INDEX_ID, DeLiCluTreeFactory.class);
indexparams.addParameter(DeLiCluTreeFactory.PAGE_SIZE_ID, 1000);
Database db = makeSimpleDatabase(UNITTEST + "hierarchical-2d.ascii", 710, indexparams, null);
-
+
// Setup actual algorithm
ListParameterization params = new ListParameterization();
params.addParameter(DeLiClu.MINPTS_ID, 18);
diff --git a/test/de/lmu/ifi/dbs/elki/algorithm/clustering/TestEMResults.java b/test/de/lmu/ifi/dbs/elki/algorithm/clustering/TestEMResults.java
index e3e4c984..16edcf94 100644
--- a/test/de/lmu/ifi/dbs/elki/algorithm/clustering/TestEMResults.java
+++ b/test/de/lmu/ifi/dbs/elki/algorithm/clustering/TestEMResults.java
@@ -1,5 +1,28 @@
package de.lmu.ifi.dbs.elki.algorithm.clustering;
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
+
import org.junit.Test;
import de.lmu.ifi.dbs.elki.JUnit4Test;
@@ -23,8 +46,7 @@ import de.lmu.ifi.dbs.elki.utilities.optionhandling.parameterization.ListParamet
*/
public class TestEMResults extends AbstractSimpleAlgorithmTest implements JUnit4Test {
/**
- * Run EM with fixed parameters and compare the result to a golden
- * standard.
+ * Run EM with fixed parameters and compare the result to a golden standard.
*
* @throws ParameterException
*/
diff --git a/test/de/lmu/ifi/dbs/elki/algorithm/clustering/TestKMeansResults.java b/test/de/lmu/ifi/dbs/elki/algorithm/clustering/TestKMeansResults.java
index 78cf3138..d4557e8f 100644
--- a/test/de/lmu/ifi/dbs/elki/algorithm/clustering/TestKMeansResults.java
+++ b/test/de/lmu/ifi/dbs/elki/algorithm/clustering/TestKMeansResults.java
@@ -1,5 +1,28 @@
package de.lmu.ifi.dbs.elki.algorithm.clustering;
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
+
import org.junit.Test;
import de.lmu.ifi.dbs.elki.JUnit4Test;
diff --git a/test/de/lmu/ifi/dbs/elki/algorithm/clustering/TestOPTICSResults.java b/test/de/lmu/ifi/dbs/elki/algorithm/clustering/TestOPTICSResults.java
index b9bd1067..d91c1060 100644
--- a/test/de/lmu/ifi/dbs/elki/algorithm/clustering/TestOPTICSResults.java
+++ b/test/de/lmu/ifi/dbs/elki/algorithm/clustering/TestOPTICSResults.java
@@ -1,5 +1,28 @@
package de.lmu.ifi.dbs.elki.algorithm.clustering;
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
+
import org.junit.Test;
import de.lmu.ifi.dbs.elki.JUnit4Test;
diff --git a/test/de/lmu/ifi/dbs/elki/algorithm/clustering/TestSLINKResults.java b/test/de/lmu/ifi/dbs/elki/algorithm/clustering/TestSLINKResults.java
index b7374942..b1a89360 100644
--- a/test/de/lmu/ifi/dbs/elki/algorithm/clustering/TestSLINKResults.java
+++ b/test/de/lmu/ifi/dbs/elki/algorithm/clustering/TestSLINKResults.java
@@ -1,5 +1,28 @@
package de.lmu.ifi.dbs.elki.algorithm.clustering;
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
+
import org.junit.Test;
import de.lmu.ifi.dbs.elki.JUnit4Test;
@@ -24,7 +47,7 @@ import de.lmu.ifi.dbs.elki.utilities.optionhandling.parameterization.ListParamet
*/
public class TestSLINKResults extends AbstractSimpleAlgorithmTest implements JUnit4Test {
// TODO: add a test for a non-single-link dataset?
-
+
/**
* Run SLINK with fixed parameters and compare the result to a golden
* standard.
diff --git a/test/de/lmu/ifi/dbs/elki/algorithm/clustering/TestSNNClusteringResults.java b/test/de/lmu/ifi/dbs/elki/algorithm/clustering/TestSNNClusteringResults.java
index 1c54e5ec..43ae1a60 100644
--- a/test/de/lmu/ifi/dbs/elki/algorithm/clustering/TestSNNClusteringResults.java
+++ b/test/de/lmu/ifi/dbs/elki/algorithm/clustering/TestSNNClusteringResults.java
@@ -1,5 +1,28 @@
package de.lmu.ifi.dbs.elki.algorithm.clustering;
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
+
import org.junit.Test;
import de.lmu.ifi.dbs.elki.JUnit4Test;
@@ -8,7 +31,6 @@ import de.lmu.ifi.dbs.elki.data.Clustering;
import de.lmu.ifi.dbs.elki.data.DoubleVector;
import de.lmu.ifi.dbs.elki.data.model.Model;
import de.lmu.ifi.dbs.elki.database.Database;
-import de.lmu.ifi.dbs.elki.distance.distancevalue.DoubleDistance;
import de.lmu.ifi.dbs.elki.index.preprocessed.snn.SharedNearestNeighborPreprocessor;
import de.lmu.ifi.dbs.elki.utilities.ClassGenericsUtil;
import de.lmu.ifi.dbs.elki.utilities.optionhandling.ParameterException;
@@ -39,7 +61,7 @@ public class TestSNNClusteringResults extends AbstractSimpleAlgorithmTest implem
params.addParameter(SNNClustering.EPSILON_ID, 77);
params.addParameter(SNNClustering.MINPTS_ID, 28);
params.addParameter(SharedNearestNeighborPreprocessor.Factory.NUMBER_OF_NEIGHBORS_ID, 100);
- SNNClustering<DoubleVector, DoubleDistance> snn = ClassGenericsUtil.parameterizeOrAbort(SNNClustering.class, params);
+ SNNClustering<DoubleVector> snn = ClassGenericsUtil.parameterizeOrAbort(SNNClustering.class, params);
testParameterizationOk(params);
// run SNN on database
diff --git a/test/de/lmu/ifi/dbs/elki/algorithm/clustering/correlation/TestCASHResults.java b/test/de/lmu/ifi/dbs/elki/algorithm/clustering/correlation/TestCASHResults.java
index fc099a91..33ba56c5 100644
--- a/test/de/lmu/ifi/dbs/elki/algorithm/clustering/correlation/TestCASHResults.java
+++ b/test/de/lmu/ifi/dbs/elki/algorithm/clustering/correlation/TestCASHResults.java
@@ -1,5 +1,28 @@
package de.lmu.ifi.dbs.elki.algorithm.clustering.correlation;
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
+
import org.junit.Test;
import de.lmu.ifi.dbs.elki.JUnit4Test;
@@ -35,7 +58,7 @@ public class TestCASHResults extends AbstractSimpleAlgorithmTest implements JUni
inp.addParameter(FileBasedDatabaseConnection.PARSER_ID, ParameterizationFunctionLabelParser.class);
// Input
Database db = makeSimpleDatabase(UNITTEST + "hierarchical-3d2d1d.csv", 600, inp, null);
-
+
// CASH parameters
ListParameterization params = new ListParameterization();
params.addParameter(CASH.JITTER_ID, 0.7);
@@ -68,17 +91,17 @@ public class TestCASHResults extends AbstractSimpleAlgorithmTest implements JUni
ListParameterization inp = new ListParameterization();
inp.addParameter(FileBasedDatabaseConnection.PARSER_ID, ParameterizationFunctionLabelParser.class);
Database db = makeSimpleDatabase(UNITTEST + "correlation-embedded-2-4d.ascii", 600, inp, null);
-
+
// CASH parameters
ListParameterization params = new ListParameterization();
params.addParameter(CASH.JITTER_ID, 0.7);
params.addParameter(CASH.MINPTS_ID, 160);
params.addParameter(CASH.MAXLEVEL_ID, 40);
-
+
// setup algorithm
CASH cash = ClassGenericsUtil.parameterizeOrAbort(CASH.class, params);
testParameterizationOk(params);
-
+
// run CASH on database
Clustering<Model> result = cash.run(db);
testFMeasure(db, result, 0.443246);
diff --git a/test/de/lmu/ifi/dbs/elki/algorithm/clustering/correlation/TestCOPACResults.java b/test/de/lmu/ifi/dbs/elki/algorithm/clustering/correlation/TestCOPACResults.java
index cc265c90..2fbe8401 100644
--- a/test/de/lmu/ifi/dbs/elki/algorithm/clustering/correlation/TestCOPACResults.java
+++ b/test/de/lmu/ifi/dbs/elki/algorithm/clustering/correlation/TestCOPACResults.java
@@ -1,5 +1,28 @@
package de.lmu.ifi.dbs.elki.algorithm.clustering.correlation;
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
+
import org.junit.Test;
import de.lmu.ifi.dbs.elki.JUnit4Test;
@@ -67,7 +90,7 @@ public class TestCOPACResults extends AbstractSimpleAlgorithmTest implements JUn
@Test
public void testCOPACOverlap() {
Database db = makeSimpleDatabase(UNITTEST + "correlation-overlap-3-5d.ascii", 650);
-
+
// Setup algorithm
ListParameterization params = new ListParameterization();
params.addParameter(COPAC.PARTITION_ALGORITHM_ID, DBSCAN.class);
@@ -80,10 +103,10 @@ public class TestCOPACResults extends AbstractSimpleAlgorithmTest implements JUn
params.addParameter(WeightedCovarianceMatrixBuilder.WEIGHT_ID, ErfcWeight.class);
params.addParameter(PCAFilteredRunner.PCA_EIGENPAIR_FILTER, PercentageEigenPairFilter.class);
params.addParameter(PercentageEigenPairFilter.ALPHA_ID, 0.8);
-
+
COPAC<DoubleVector, DoubleDistance> copac = ClassGenericsUtil.parameterizeOrAbort(COPAC.class, params);
testParameterizationOk(params);
-
+
Clustering<Model> result = copac.run(db);
testFMeasure(db, result, 0.84687864);
testClusterSizes(result, new int[] { 1, 22, 22, 29, 34, 158, 182, 202 });
diff --git a/test/de/lmu/ifi/dbs/elki/algorithm/clustering/correlation/TestERiCResults.java b/test/de/lmu/ifi/dbs/elki/algorithm/clustering/correlation/TestERiCResults.java
index 06f3c723..ec030ec1 100644
--- a/test/de/lmu/ifi/dbs/elki/algorithm/clustering/correlation/TestERiCResults.java
+++ b/test/de/lmu/ifi/dbs/elki/algorithm/clustering/correlation/TestERiCResults.java
@@ -1,5 +1,28 @@
package de.lmu.ifi.dbs.elki.algorithm.clustering.correlation;
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
+
import org.junit.Test;
import de.lmu.ifi.dbs.elki.JUnit4Test;
@@ -76,7 +99,7 @@ public class TestERiCResults extends AbstractSimpleAlgorithmTest implements JUni
@Test
public void testERiCOverlap() {
Database db = makeSimpleDatabase(UNITTEST + "correlation-overlap-3-5d.ascii", 650);
-
+
// Setup algorithm
ListParameterization params = new ListParameterization();
// ERiC
@@ -95,10 +118,10 @@ public class TestERiCResults extends AbstractSimpleAlgorithmTest implements JUni
params.addParameter(WeightedCovarianceMatrixBuilder.WEIGHT_ID, ErfcWeight.class);
params.addParameter(PCAFilteredRunner.PCA_EIGENPAIR_FILTER, PercentageEigenPairFilter.class);
params.addParameter(PercentageEigenPairFilter.ALPHA_ID, 0.6);
-
+
ERiC<DoubleVector> eric = ClassGenericsUtil.parameterizeOrAbort(ERiC.class, params);
testParameterizationOk(params);
-
+
// run ERiC on database
Clustering<CorrelationModel<DoubleVector>> result = eric.run(db);
testFMeasure(db, result, 0.831136946);
diff --git a/test/de/lmu/ifi/dbs/elki/algorithm/clustering/correlation/TestFourCResults.java b/test/de/lmu/ifi/dbs/elki/algorithm/clustering/correlation/TestFourCResults.java
index a0c97d6e..bfbddd64 100644
--- a/test/de/lmu/ifi/dbs/elki/algorithm/clustering/correlation/TestFourCResults.java
+++ b/test/de/lmu/ifi/dbs/elki/algorithm/clustering/correlation/TestFourCResults.java
@@ -1,5 +1,28 @@
package de.lmu.ifi.dbs.elki.algorithm.clustering.correlation;
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
+
import org.junit.Test;
import de.lmu.ifi.dbs.elki.JUnit4Test;
@@ -56,17 +79,17 @@ public class TestFourCResults extends AbstractSimpleAlgorithmTest implements JUn
@Test
public void testFourCOverlap() {
Database db = makeSimpleDatabase(UNITTEST + "correlation-overlap-3-5d.ascii", 650);
-
+
// Setup algorithm
ListParameterization params = new ListParameterization();
// 4C
params.addParameter(AbstractProjectedDBSCAN.EPSILON_ID, 1.2);
params.addParameter(AbstractProjectedDBSCAN.MINPTS_ID, 5);
params.addParameter(AbstractProjectedDBSCAN.LAMBDA_ID, 3);
-
+
FourC<DoubleVector> fourc = ClassGenericsUtil.parameterizeOrAbort(FourC.class, params);
testParameterizationOk(params);
-
+
// run 4C on database
Clustering<Model> result = fourc.run(db);
testFMeasure(db, result, 0.48305405);
diff --git a/test/de/lmu/ifi/dbs/elki/algorithm/clustering/correlation/TestORCLUSResults.java b/test/de/lmu/ifi/dbs/elki/algorithm/clustering/correlation/TestORCLUSResults.java
index 33c29371..48b84d04 100644
--- a/test/de/lmu/ifi/dbs/elki/algorithm/clustering/correlation/TestORCLUSResults.java
+++ b/test/de/lmu/ifi/dbs/elki/algorithm/clustering/correlation/TestORCLUSResults.java
@@ -1,5 +1,28 @@
package de.lmu.ifi.dbs.elki.algorithm.clustering.correlation;
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
+
import org.junit.Test;
import de.lmu.ifi.dbs.elki.JUnit4Test;
diff --git a/test/de/lmu/ifi/dbs/elki/algorithm/clustering/subspace/TestCLIQUEResults.java b/test/de/lmu/ifi/dbs/elki/algorithm/clustering/subspace/TestCLIQUEResults.java
index d3d8cdbe..d2cacf1b 100644
--- a/test/de/lmu/ifi/dbs/elki/algorithm/clustering/subspace/TestCLIQUEResults.java
+++ b/test/de/lmu/ifi/dbs/elki/algorithm/clustering/subspace/TestCLIQUEResults.java
@@ -1,5 +1,28 @@
package de.lmu.ifi.dbs.elki.algorithm.clustering.subspace;
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
+
import org.junit.Test;
import de.lmu.ifi.dbs.elki.JUnit4Test;
@@ -64,14 +87,14 @@ public class TestCLIQUEResults extends AbstractSimpleAlgorithmTest implements JU
@Test
public void testCLIQUESubspaceOverlapping() {
Database db = makeSimpleDatabase(UNITTEST + "subspace-overlapping-3-4d.ascii", 850);
-
+
// Setup algorithm
ListParameterization params = new ListParameterization();
params.addParameter(CLIQUE.TAU_ID, 0.2);
params.addParameter(CLIQUE.XSI_ID, 6);
CLIQUE<DoubleVector> clique = ClassGenericsUtil.parameterizeOrAbort(CLIQUE.class, params);
testParameterizationOk(params);
-
+
// run CLIQUE on database
Clustering<SubspaceModel<DoubleVector>> result = clique.run(db);
testFMeasure(db, result, 0.433661);
diff --git a/test/de/lmu/ifi/dbs/elki/algorithm/clustering/subspace/TestDiSHResults.java b/test/de/lmu/ifi/dbs/elki/algorithm/clustering/subspace/TestDiSHResults.java
index 2cb08fd7..ca8f55b4 100644
--- a/test/de/lmu/ifi/dbs/elki/algorithm/clustering/subspace/TestDiSHResults.java
+++ b/test/de/lmu/ifi/dbs/elki/algorithm/clustering/subspace/TestDiSHResults.java
@@ -1,5 +1,28 @@
package de.lmu.ifi.dbs.elki.algorithm.clustering.subspace;
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
+
import org.junit.Test;
import de.lmu.ifi.dbs.elki.JUnit4Test;
@@ -55,14 +78,14 @@ public class TestDiSHResults extends AbstractSimpleAlgorithmTest implements JUni
@Test
public void testDiSHSubspaceOverlapping() {
Database db = makeSimpleDatabase(UNITTEST + "subspace-overlapping-4-5d.ascii", 1100);
-
+
// Setup algorithm
ListParameterization params = new ListParameterization();
params.addParameter(DiSH.EPSILON_ID, 0.1);
params.addParameter(DiSH.MU_ID, 30);
DiSH<DoubleVector> dish = ClassGenericsUtil.parameterizeOrAbort(DiSH.class, params);
testParameterizationOk(params);
-
+
// run DiSH on database
Clustering<SubspaceModel<DoubleVector>> result = dish.run(db);
testFMeasure(db, result, 0.6376870);
diff --git a/test/de/lmu/ifi/dbs/elki/algorithm/clustering/subspace/TestPROCLUSResults.java b/test/de/lmu/ifi/dbs/elki/algorithm/clustering/subspace/TestPROCLUSResults.java
index 66e7ed0b..48dbe9c3 100644
--- a/test/de/lmu/ifi/dbs/elki/algorithm/clustering/subspace/TestPROCLUSResults.java
+++ b/test/de/lmu/ifi/dbs/elki/algorithm/clustering/subspace/TestPROCLUSResults.java
@@ -1,5 +1,28 @@
package de.lmu.ifi.dbs.elki.algorithm.clustering.subspace;
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
+
import org.junit.Test;
import de.lmu.ifi.dbs.elki.JUnit4Test;
@@ -58,7 +81,7 @@ public class TestPROCLUSResults extends AbstractSimpleAlgorithmTest implements J
@Test
public void testPROCLUSSubspaceOverlapping() {
Database db = makeSimpleDatabase(UNITTEST + "subspace-overlapping-3-4d.ascii", 850);
-
+
// Setup algorithm
ListParameterization params = new ListParameterization();
params.addParameter(PROCLUS.L_ID, 2);
@@ -66,7 +89,7 @@ public class TestPROCLUSResults extends AbstractSimpleAlgorithmTest implements J
params.addParameter(PROCLUS.SEED_ID, 2);
PROCLUS<DoubleVector> proclus = ClassGenericsUtil.parameterizeOrAbort(PROCLUS.class, params);
testParameterizationOk(params);
-
+
// run PROCLUS on database
Clustering<Model> result = proclus.run(db);
testFMeasure(db, result, 0.9673718);
diff --git a/test/de/lmu/ifi/dbs/elki/algorithm/clustering/subspace/TestPreDeConResults.java b/test/de/lmu/ifi/dbs/elki/algorithm/clustering/subspace/TestPreDeConResults.java
index 25704194..9e04d6d3 100644
--- a/test/de/lmu/ifi/dbs/elki/algorithm/clustering/subspace/TestPreDeConResults.java
+++ b/test/de/lmu/ifi/dbs/elki/algorithm/clustering/subspace/TestPreDeConResults.java
@@ -1,5 +1,28 @@
package de.lmu.ifi.dbs.elki.algorithm.clustering.subspace;
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
+
import org.junit.Test;
import de.lmu.ifi.dbs.elki.JUnit4Test;
@@ -37,7 +60,8 @@ public class TestPreDeConResults extends AbstractSimpleAlgorithmTest implements
ListParameterization inp = new ListParameterization();
inp.addParameter(ClassLabelFilter.CLASS_LABEL_INDEX_ID, 1);
Class<?>[] filters = new Class<?>[] { ClassLabelFilter.class };
- // FIXME: makeSimpleDatabase currently does also add FILTERS, this doesn't work.
+ // FIXME: makeSimpleDatabase currently does also add FILTERS, this doesn't
+ // work.
Database db = makeSimpleDatabase(UNITTEST + "axis-parallel-subspace-clusters-6d.csv.gz", 2500, inp, filters);
ListParameterization params = new ListParameterization();
diff --git a/test/de/lmu/ifi/dbs/elki/algorithm/clustering/subspace/TestSUBCLUResults.java b/test/de/lmu/ifi/dbs/elki/algorithm/clustering/subspace/TestSUBCLUResults.java
index 65756bbc..9f0e1550 100644
--- a/test/de/lmu/ifi/dbs/elki/algorithm/clustering/subspace/TestSUBCLUResults.java
+++ b/test/de/lmu/ifi/dbs/elki/algorithm/clustering/subspace/TestSUBCLUResults.java
@@ -1,5 +1,28 @@
package de.lmu.ifi.dbs.elki.algorithm.clustering.subspace;
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
+
import org.junit.Test;
import de.lmu.ifi.dbs.elki.JUnit4Test;
@@ -57,14 +80,14 @@ public class TestSUBCLUResults extends AbstractSimpleAlgorithmTest implements JU
@Test
public void testSUBCLUSubspaceOverlapping() {
Database db = makeSimpleDatabase(UNITTEST + "subspace-overlapping-3-4d.ascii", 850);
-
+
// Setup algorithm
ListParameterization params = new ListParameterization();
params.addParameter(SUBCLU.EPSILON_ID, 0.04);
params.addParameter(SUBCLU.MINPTS_ID, 70);
SUBCLU<DoubleVector> subclu = ClassGenericsUtil.parameterizeOrAbort(SUBCLU.class, params);
testParameterizationOk(params);
-
+
// run SUBCLU on database
Clustering<SubspaceModel<DoubleVector>> result = subclu.run(db);
testFMeasure(db, result, 0.49279033);
diff --git a/test/de/lmu/ifi/dbs/elki/algorithm/outlier/TestABOD.java b/test/de/lmu/ifi/dbs/elki/algorithm/outlier/TestABOD.java
index 4a4a635c..022c448c 100644
--- a/test/de/lmu/ifi/dbs/elki/algorithm/outlier/TestABOD.java
+++ b/test/de/lmu/ifi/dbs/elki/algorithm/outlier/TestABOD.java
@@ -1,5 +1,28 @@
package de.lmu.ifi.dbs.elki.algorithm.outlier;
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
+
import org.junit.Test;
import de.lmu.ifi.dbs.elki.JUnit4Test;
diff --git a/test/de/lmu/ifi/dbs/elki/algorithm/outlier/TestAggarwalYuEvolutionary.java b/test/de/lmu/ifi/dbs/elki/algorithm/outlier/TestAggarwalYuEvolutionary.java
index e5eb09d5..c2f8c016 100644
--- a/test/de/lmu/ifi/dbs/elki/algorithm/outlier/TestAggarwalYuEvolutionary.java
+++ b/test/de/lmu/ifi/dbs/elki/algorithm/outlier/TestAggarwalYuEvolutionary.java
@@ -1,5 +1,28 @@
package de.lmu.ifi.dbs.elki.algorithm.outlier;
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
+
import org.junit.Test;
import de.lmu.ifi.dbs.elki.JUnit4Test;
diff --git a/test/de/lmu/ifi/dbs/elki/algorithm/outlier/TestAggarwalYuNaive.java b/test/de/lmu/ifi/dbs/elki/algorithm/outlier/TestAggarwalYuNaive.java
index cf396f35..92c74f3c 100644
--- a/test/de/lmu/ifi/dbs/elki/algorithm/outlier/TestAggarwalYuNaive.java
+++ b/test/de/lmu/ifi/dbs/elki/algorithm/outlier/TestAggarwalYuNaive.java
@@ -1,5 +1,28 @@
package de.lmu.ifi.dbs.elki.algorithm.outlier;
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
+
import org.junit.Test;
import de.lmu.ifi.dbs.elki.JUnit4Test;
diff --git a/test/de/lmu/ifi/dbs/elki/algorithm/outlier/TestDBOutlierDetection.java b/test/de/lmu/ifi/dbs/elki/algorithm/outlier/TestDBOutlierDetection.java
index 5fb9c983..79c596ff 100644
--- a/test/de/lmu/ifi/dbs/elki/algorithm/outlier/TestDBOutlierDetection.java
+++ b/test/de/lmu/ifi/dbs/elki/algorithm/outlier/TestDBOutlierDetection.java
@@ -1,5 +1,28 @@
package de.lmu.ifi.dbs.elki.algorithm.outlier;
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
+
import org.junit.Test;
import de.lmu.ifi.dbs.elki.JUnit4Test;
@@ -12,11 +35,11 @@ import de.lmu.ifi.dbs.elki.utilities.ClassGenericsUtil;
import de.lmu.ifi.dbs.elki.utilities.optionhandling.parameterization.ListParameterization;
/**
- * Tests the DBOutlierDetection algorithm.
+ * Tests the DBOutlierDetection algorithm.
*
* @author Lucia Cichella
*/
-public class TestDBOutlierDetection extends AbstractSimpleAlgorithmTest implements JUnit4Test{
+public class TestDBOutlierDetection extends AbstractSimpleAlgorithmTest implements JUnit4Test {
@Test
public void testDBOutlierDetection() {
Database db = makeSimpleDatabase(UNITTEST + "outlier-fire.ascii", 1025);
@@ -26,14 +49,14 @@ public class TestDBOutlierDetection extends AbstractSimpleAlgorithmTest implemen
params.addParameter(DBOutlierDetection.D_ID, 0.175);
params.addParameter(DBOutlierDetection.P_ID, 0.98);
- //setup Algorithm
+ // setup Algorithm
DBOutlierDetection<DoubleVector, DoubleDistance> dbOutlierDetection = ClassGenericsUtil.parameterizeOrAbort(DBOutlierDetection.class, params);
testParameterizationOk(params);
- //run DBOutlierDetection on database
+ // run DBOutlierDetection on database
OutlierResult result = dbOutlierDetection.run(db);
testSingleScore(result, 1025, 0.0);
- testAUC(db, "Noise", result, 0.97487179);
+ testAUC(db, "Noise", result, 0.97487179);
}
} \ No newline at end of file
diff --git a/test/de/lmu/ifi/dbs/elki/algorithm/outlier/TestDBOutlierScore.java b/test/de/lmu/ifi/dbs/elki/algorithm/outlier/TestDBOutlierScore.java
index 6f76efe2..875eceb3 100644
--- a/test/de/lmu/ifi/dbs/elki/algorithm/outlier/TestDBOutlierScore.java
+++ b/test/de/lmu/ifi/dbs/elki/algorithm/outlier/TestDBOutlierScore.java
@@ -1,5 +1,28 @@
package de.lmu.ifi.dbs.elki.algorithm.outlier;
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
+
import org.junit.Test;
import de.lmu.ifi.dbs.elki.JUnit4Test;
diff --git a/test/de/lmu/ifi/dbs/elki/algorithm/outlier/TestGaussianModel.java b/test/de/lmu/ifi/dbs/elki/algorithm/outlier/TestGaussianModel.java
index 96107e8a..52c20bbe 100644
--- a/test/de/lmu/ifi/dbs/elki/algorithm/outlier/TestGaussianModel.java
+++ b/test/de/lmu/ifi/dbs/elki/algorithm/outlier/TestGaussianModel.java
@@ -1,5 +1,28 @@
package de.lmu.ifi.dbs.elki.algorithm.outlier;
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
+
import org.junit.Test;
import de.lmu.ifi.dbs.elki.JUnit4Test;
diff --git a/test/de/lmu/ifi/dbs/elki/algorithm/outlier/TestGaussianUniformMixture.java b/test/de/lmu/ifi/dbs/elki/algorithm/outlier/TestGaussianUniformMixture.java
index a59c7810..e0c54380 100644
--- a/test/de/lmu/ifi/dbs/elki/algorithm/outlier/TestGaussianUniformMixture.java
+++ b/test/de/lmu/ifi/dbs/elki/algorithm/outlier/TestGaussianUniformMixture.java
@@ -1,5 +1,28 @@
package de.lmu.ifi.dbs.elki.algorithm.outlier;
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
+
import org.junit.Test;
import de.lmu.ifi.dbs.elki.JUnit4Test;
diff --git a/test/de/lmu/ifi/dbs/elki/algorithm/outlier/TestINFLO.java b/test/de/lmu/ifi/dbs/elki/algorithm/outlier/TestINFLO.java
index 25092ad5..2323e512 100644
--- a/test/de/lmu/ifi/dbs/elki/algorithm/outlier/TestINFLO.java
+++ b/test/de/lmu/ifi/dbs/elki/algorithm/outlier/TestINFLO.java
@@ -1,5 +1,28 @@
package de.lmu.ifi.dbs.elki.algorithm.outlier;
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
+
import org.junit.Test;
import de.lmu.ifi.dbs.elki.JUnit4Test;
diff --git a/test/de/lmu/ifi/dbs/elki/algorithm/outlier/TestKNNOutlier.java b/test/de/lmu/ifi/dbs/elki/algorithm/outlier/TestKNNOutlier.java
index c5ba91b7..a6708171 100644
--- a/test/de/lmu/ifi/dbs/elki/algorithm/outlier/TestKNNOutlier.java
+++ b/test/de/lmu/ifi/dbs/elki/algorithm/outlier/TestKNNOutlier.java
@@ -1,5 +1,28 @@
package de.lmu.ifi.dbs.elki.algorithm.outlier;
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
+
import org.junit.Test;
import de.lmu.ifi.dbs.elki.JUnit4Test;
diff --git a/test/de/lmu/ifi/dbs/elki/algorithm/outlier/TestKNNWeightOutlier.java b/test/de/lmu/ifi/dbs/elki/algorithm/outlier/TestKNNWeightOutlier.java
index e84db06c..be5e2704 100644
--- a/test/de/lmu/ifi/dbs/elki/algorithm/outlier/TestKNNWeightOutlier.java
+++ b/test/de/lmu/ifi/dbs/elki/algorithm/outlier/TestKNNWeightOutlier.java
@@ -1,5 +1,28 @@
package de.lmu.ifi.dbs.elki.algorithm.outlier;
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
+
import org.junit.Test;
import de.lmu.ifi.dbs.elki.JUnit4Test;
diff --git a/test/de/lmu/ifi/dbs/elki/algorithm/outlier/TestLDOF.java b/test/de/lmu/ifi/dbs/elki/algorithm/outlier/TestLDOF.java
index cdcbd94b..210a9e71 100644
--- a/test/de/lmu/ifi/dbs/elki/algorithm/outlier/TestLDOF.java
+++ b/test/de/lmu/ifi/dbs/elki/algorithm/outlier/TestLDOF.java
@@ -1,5 +1,28 @@
package de.lmu.ifi.dbs.elki.algorithm.outlier;
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
+
import org.junit.Test;
import de.lmu.ifi.dbs.elki.JUnit4Test;
diff --git a/test/de/lmu/ifi/dbs/elki/algorithm/outlier/TestLOCI.java b/test/de/lmu/ifi/dbs/elki/algorithm/outlier/TestLOCI.java
index f4e95736..3d2cd32e 100644
--- a/test/de/lmu/ifi/dbs/elki/algorithm/outlier/TestLOCI.java
+++ b/test/de/lmu/ifi/dbs/elki/algorithm/outlier/TestLOCI.java
@@ -1,5 +1,28 @@
package de.lmu.ifi.dbs.elki.algorithm.outlier;
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
+
import org.junit.Test;
import de.lmu.ifi.dbs.elki.JUnit4Test;
diff --git a/test/de/lmu/ifi/dbs/elki/algorithm/outlier/TestLOF.java b/test/de/lmu/ifi/dbs/elki/algorithm/outlier/TestLOF.java
index b7586344..e4d71111 100644
--- a/test/de/lmu/ifi/dbs/elki/algorithm/outlier/TestLOF.java
+++ b/test/de/lmu/ifi/dbs/elki/algorithm/outlier/TestLOF.java
@@ -1,5 +1,28 @@
package de.lmu.ifi.dbs.elki.algorithm.outlier;
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
+
import org.junit.Test;
import de.lmu.ifi.dbs.elki.JUnit4Test;
diff --git a/test/de/lmu/ifi/dbs/elki/algorithm/outlier/TestLoOP.java b/test/de/lmu/ifi/dbs/elki/algorithm/outlier/TestLoOP.java
index 0aa10999..18d759c5 100644
--- a/test/de/lmu/ifi/dbs/elki/algorithm/outlier/TestLoOP.java
+++ b/test/de/lmu/ifi/dbs/elki/algorithm/outlier/TestLoOP.java
@@ -1,5 +1,28 @@
package de.lmu.ifi.dbs.elki.algorithm.outlier;
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
+
import org.junit.Test;
import de.lmu.ifi.dbs.elki.JUnit4Test;
diff --git a/test/de/lmu/ifi/dbs/elki/algorithm/outlier/TestOPTICSOF.java b/test/de/lmu/ifi/dbs/elki/algorithm/outlier/TestOPTICSOF.java
index 218e52a8..be6779ff 100644
--- a/test/de/lmu/ifi/dbs/elki/algorithm/outlier/TestOPTICSOF.java
+++ b/test/de/lmu/ifi/dbs/elki/algorithm/outlier/TestOPTICSOF.java
@@ -1,5 +1,28 @@
package de.lmu.ifi.dbs.elki.algorithm.outlier;
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
+
import org.junit.Test;
import de.lmu.ifi.dbs.elki.JUnit4Test;
diff --git a/test/de/lmu/ifi/dbs/elki/algorithm/outlier/TestOnlineLOF.java b/test/de/lmu/ifi/dbs/elki/algorithm/outlier/TestOnlineLOF.java
index 21e3d12c..4c875917 100644
--- a/test/de/lmu/ifi/dbs/elki/algorithm/outlier/TestOnlineLOF.java
+++ b/test/de/lmu/ifi/dbs/elki/algorithm/outlier/TestOnlineLOF.java
@@ -1,5 +1,28 @@
package de.lmu.ifi.dbs.elki.algorithm.outlier;
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
+
import static org.junit.Assert.assertTrue;
import static org.junit.Assert.fail;
@@ -98,7 +121,7 @@ public class TestOnlineLOF implements JUnit4Test {
// setup algorithm
OnlineLOF<DoubleVector, DoubleDistance> lof = new OnlineLOF<DoubleVector, DoubleDistance>(k, neighborhoodDistanceFunction, reachabilityDistanceFunction);
-
+
// run OnlineLOF on database
OutlierResult result = lof.run(db);
diff --git a/test/de/lmu/ifi/dbs/elki/algorithm/outlier/TestReferenceBasedOutlierDetection.java b/test/de/lmu/ifi/dbs/elki/algorithm/outlier/TestReferenceBasedOutlierDetection.java
index a8f17231..901f5a3e 100644
--- a/test/de/lmu/ifi/dbs/elki/algorithm/outlier/TestReferenceBasedOutlierDetection.java
+++ b/test/de/lmu/ifi/dbs/elki/algorithm/outlier/TestReferenceBasedOutlierDetection.java
@@ -1,5 +1,28 @@
package de.lmu.ifi.dbs.elki.algorithm.outlier;
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
+
import org.junit.Test;
import de.lmu.ifi.dbs.elki.JUnit4Test;
diff --git a/test/de/lmu/ifi/dbs/elki/algorithm/outlier/TestSOD.java b/test/de/lmu/ifi/dbs/elki/algorithm/outlier/TestSOD.java
index d26ab55a..cab95aff 100644
--- a/test/de/lmu/ifi/dbs/elki/algorithm/outlier/TestSOD.java
+++ b/test/de/lmu/ifi/dbs/elki/algorithm/outlier/TestSOD.java
@@ -1,12 +1,34 @@
package de.lmu.ifi.dbs.elki.algorithm.outlier;
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
+
import org.junit.Test;
import de.lmu.ifi.dbs.elki.JUnit4Test;
import de.lmu.ifi.dbs.elki.algorithm.AbstractSimpleAlgorithmTest;
import de.lmu.ifi.dbs.elki.data.DoubleVector;
import de.lmu.ifi.dbs.elki.database.Database;
-import de.lmu.ifi.dbs.elki.distance.distancevalue.DoubleDistance;
import de.lmu.ifi.dbs.elki.index.preprocessed.snn.SharedNearestNeighborPreprocessor;
import de.lmu.ifi.dbs.elki.result.outlier.OutlierResult;
import de.lmu.ifi.dbs.elki.utilities.ClassGenericsUtil;
@@ -28,7 +50,7 @@ public class TestSOD extends AbstractSimpleAlgorithmTest implements JUnit4Test {
params.addParameter(SharedNearestNeighborPreprocessor.Factory.NUMBER_OF_NEIGHBORS_ID, 19);
// setup Algorithm
- SOD<DoubleVector, DoubleDistance> sod = ClassGenericsUtil.parameterizeOrAbort(SOD.class, params);
+ SOD<DoubleVector> sod = ClassGenericsUtil.parameterizeOrAbort(SOD.class, params);
testParameterizationOk(params);
// run SOD on database
diff --git a/test/de/lmu/ifi/dbs/elki/algorithm/outlier/meta/TestFeatureBagging.java b/test/de/lmu/ifi/dbs/elki/algorithm/outlier/meta/TestFeatureBagging.java
index 68d68f62..0c568578 100644
--- a/test/de/lmu/ifi/dbs/elki/algorithm/outlier/meta/TestFeatureBagging.java
+++ b/test/de/lmu/ifi/dbs/elki/algorithm/outlier/meta/TestFeatureBagging.java
@@ -1,5 +1,28 @@
package de.lmu.ifi.dbs.elki.algorithm.outlier.meta;
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
+
import org.junit.Test;
import de.lmu.ifi.dbs.elki.JUnit4Test;
diff --git a/test/de/lmu/ifi/dbs/elki/data/spatial/TestPolygon.java b/test/de/lmu/ifi/dbs/elki/data/spatial/TestPolygon.java
index 385461e7..1294c91a 100644
--- a/test/de/lmu/ifi/dbs/elki/data/spatial/TestPolygon.java
+++ b/test/de/lmu/ifi/dbs/elki/data/spatial/TestPolygon.java
@@ -1,5 +1,28 @@
package de.lmu.ifi.dbs.elki.data.spatial;
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
+
import static org.junit.Assert.*;
import java.util.ArrayList;
diff --git a/test/de/lmu/ifi/dbs/elki/evaluation/TestComputeROC.java b/test/de/lmu/ifi/dbs/elki/evaluation/TestComputeROC.java
index 46adb1bb..2ad7c11f 100644
--- a/test/de/lmu/ifi/dbs/elki/evaluation/TestComputeROC.java
+++ b/test/de/lmu/ifi/dbs/elki/evaluation/TestComputeROC.java
@@ -1,5 +1,28 @@
package de.lmu.ifi.dbs.elki.evaluation;
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
+
import java.util.ArrayList;
import java.util.List;
@@ -19,7 +42,7 @@ import de.lmu.ifi.dbs.elki.utilities.pairs.Pair;
* Test to validate ROC curve computation.
*
* @author Erich Schubert
- *
+ *
*/
public class TestComputeROC implements JUnit4Test {
/**
@@ -33,7 +56,7 @@ public class TestComputeROC implements JUnit4Test {
positive.add(DBIDUtil.importInteger(3));
positive.add(DBIDUtil.importInteger(4));
positive.add(DBIDUtil.importInteger(5));
-
+
ArrayList<Pair<Double, DBID>> distances = new ArrayList<Pair<Double, DBID>>();
distances.add(new Pair<Double, DBID>(0.0, DBIDUtil.importInteger(1)));
distances.add(new Pair<Double, DBID>(1.0, DBIDUtil.importInteger(2)));
@@ -44,11 +67,11 @@ public class TestComputeROC implements JUnit4Test {
distances.add(new Pair<Double, DBID>(4.0, DBIDUtil.importInteger(4)));
distances.add(new Pair<Double, DBID>(5.0, DBIDUtil.importInteger(9)));
distances.add(new Pair<Double, DBID>(6.0, DBIDUtil.importInteger(5)));
-
+
List<DoubleDoublePair> roccurve = ROC.materializeROC(9, positive, distances.iterator());
// System.out.println(roccurve);
Assert.assertEquals("ROC curve too complex", 6, roccurve.size());
-
+
double auc = ROC.computeAUC(roccurve);
Assert.assertEquals("ROC AUC not right.", 0.6, auc, 0.0001);
}
diff --git a/test/de/lmu/ifi/dbs/elki/evaluation/TestPairCountingFMeasure.java b/test/de/lmu/ifi/dbs/elki/evaluation/TestPairCountingFMeasure.java
index 4944db3d..123e2e4f 100644
--- a/test/de/lmu/ifi/dbs/elki/evaluation/TestPairCountingFMeasure.java
+++ b/test/de/lmu/ifi/dbs/elki/evaluation/TestPairCountingFMeasure.java
@@ -1,5 +1,28 @@
package de.lmu.ifi.dbs.elki.evaluation;
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
+
import static org.junit.Assert.assertEquals;
import static org.junit.Assert.assertTrue;
diff --git a/test/de/lmu/ifi/dbs/elki/index/TestIndexStructures.java b/test/de/lmu/ifi/dbs/elki/index/TestIndexStructures.java
index 8d30bea4..53801e09 100644
--- a/test/de/lmu/ifi/dbs/elki/index/TestIndexStructures.java
+++ b/test/de/lmu/ifi/dbs/elki/index/TestIndexStructures.java
@@ -1,5 +1,28 @@
package de.lmu.ifi.dbs.elki.index;
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
+
import static junit.framework.Assert.assertEquals;
import static junit.framework.Assert.assertTrue;
@@ -128,13 +151,16 @@ public class TestIndexStructures implements JUnit4Test {
*
* @throws ParameterException
*/
-// @Test
-// public void testXTree() {
-// ListParameterization xtreeparams = new ListParameterization();
-// xtreeparams.addParameter(StaticArrayDatabase.INDEX_ID, experimentalcode.shared.index.xtree.XTreeFactory.class);
-// xtreeparams.addParameter(TreeIndexFactory.PAGE_SIZE_ID, 300);
-// testFileBasedDatabaseConnection(xtreeparams, DoubleDistanceRStarTreeKNNQuery.class, DoubleDistanceRStarTreeRangeQuery.class);
-// }
+ // @Test
+ // public void testXTree() {
+ // ListParameterization xtreeparams = new ListParameterization();
+ // xtreeparams.addParameter(StaticArrayDatabase.INDEX_ID,
+ // experimentalcode.shared.index.xtree.XTreeFactory.class);
+ // xtreeparams.addParameter(TreeIndexFactory.PAGE_SIZE_ID, 300);
+ // testFileBasedDatabaseConnection(xtreeparams,
+ // DoubleDistanceRStarTreeKNNQuery.class,
+ // DoubleDistanceRStarTreeRangeQuery.class);
+ // }
/**
* Actual test routine.
diff --git a/test/de/lmu/ifi/dbs/elki/index/preprocessed/TestMaterializedKNNAndRKNNPreprocessor.java b/test/de/lmu/ifi/dbs/elki/index/preprocessed/TestMaterializedKNNAndRKNNPreprocessor.java
index 2d95074a..e3948fef 100644
--- a/test/de/lmu/ifi/dbs/elki/index/preprocessed/TestMaterializedKNNAndRKNNPreprocessor.java
+++ b/test/de/lmu/ifi/dbs/elki/index/preprocessed/TestMaterializedKNNAndRKNNPreprocessor.java
@@ -1,5 +1,28 @@
package de.lmu.ifi.dbs.elki.index.preprocessed;
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
+
import static junit.framework.Assert.assertEquals;
import static junit.framework.Assert.assertTrue;
diff --git a/test/de/lmu/ifi/dbs/elki/logging/TestOutputStreamLogger.java b/test/de/lmu/ifi/dbs/elki/logging/TestOutputStreamLogger.java
index 97e77867..7d0a9317 100644
--- a/test/de/lmu/ifi/dbs/elki/logging/TestOutputStreamLogger.java
+++ b/test/de/lmu/ifi/dbs/elki/logging/TestOutputStreamLogger.java
@@ -1,5 +1,28 @@
package de.lmu.ifi.dbs.elki.logging;
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
+
import static org.junit.Assert.assertEquals;
import java.io.ByteArrayOutputStream;
diff --git a/test/de/lmu/ifi/dbs/elki/math/TestAffineTransformation.java b/test/de/lmu/ifi/dbs/elki/math/TestAffineTransformation.java
index c5616e8d..0ac6b1a6 100644
--- a/test/de/lmu/ifi/dbs/elki/math/TestAffineTransformation.java
+++ b/test/de/lmu/ifi/dbs/elki/math/TestAffineTransformation.java
@@ -1,5 +1,28 @@
package de.lmu.ifi.dbs.elki.math;
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
+
import static org.junit.Assert.assertEquals;
import static org.junit.Assert.assertNotSame;
import static org.junit.Assert.assertTrue;
@@ -87,19 +110,19 @@ public class TestAffineTransformation implements JUnit4Test {
assertEquals("Vector wasn't translated properly backwards.", v1, v2b);
Vector v1b = t.applyInverse(v1t);
assertEquals("Vector wasn't translated properly back and forward.", v1, v1b);
-
+
// Translation
Vector vd = v1.minus(v2b);
Vector vtd = v1t.minus(v2t);
assertEquals("Translation changed vector difference.", vd, vtd);
-
+
// Translation shouldn't change relative vectors.
assertEquals("Relative vectors weren't left unchanged by translation!", v1, t.applyRelative(v1));
assertEquals("Relative vectors weren't left unchanged by translation!", v2t, t.applyRelative(v2t));
assertEquals("Relative vectors weren't left unchanged by translation!", v1t, t.applyRelative(v1t));
assertEquals("Relative vectors weren't left unchanged by translation!", v2b, t.applyRelative(v2b));
}
-
+
/**
* Test direct inclusion of matrices
*/
@@ -154,7 +177,7 @@ public class TestAffineTransformation implements JUnit4Test {
assertTrue("Forward-Backward didn't work correctly.", v1.minus(v3).euclideanLength() < 0.0001);
Vector v4 = t.apply(t.apply(t.apply(v1)));
assertTrue("Triple-Rotation by 120 degree didn't work", v1.minus(v4).euclideanLength() < 0.0001);
-
+
// Rotation shouldn't disagree for relative vectors.
// (they just are not affected by translation!)
assertEquals("Relative vectors were affected differently by pure rotation!", v2, t.applyRelative(v1));
@@ -180,13 +203,12 @@ public class TestAffineTransformation implements JUnit4Test {
Vector p5 = new Vector(new double[] { 7, 3, 5 });
Vector p6 = new Vector(new double[] { 7, 5, 3 });
Vector[] ps = new Vector[] {
- // with no arguments.
+ // with no arguments.
p1,
- // with just one argument.
+ // with just one argument.
p1, p3, p5,
- // with two arguments.
- p1, p2, p3, p4, p5, p6,
- };
+ // with two arguments.
+ p1, p2, p3, p4, p5, p6, };
// index in reference array
int idx = 0;
diff --git a/test/de/lmu/ifi/dbs/elki/math/TestFlexiHistogram.java b/test/de/lmu/ifi/dbs/elki/math/TestFlexiHistogram.java
index 3ce38f8b..b3db5b85 100644
--- a/test/de/lmu/ifi/dbs/elki/math/TestFlexiHistogram.java
+++ b/test/de/lmu/ifi/dbs/elki/math/TestFlexiHistogram.java
@@ -1,5 +1,28 @@
package de.lmu.ifi.dbs.elki.math;
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
+
import static org.junit.Assert.assertArrayEquals;
import static org.junit.Assert.assertEquals;
diff --git a/test/de/lmu/ifi/dbs/elki/math/TestKernelDensityFitting.java b/test/de/lmu/ifi/dbs/elki/math/TestKernelDensityFitting.java
index cc0a1f5c..7533a235 100644
--- a/test/de/lmu/ifi/dbs/elki/math/TestKernelDensityFitting.java
+++ b/test/de/lmu/ifi/dbs/elki/math/TestKernelDensityFitting.java
@@ -1,5 +1,28 @@
package de.lmu.ifi.dbs.elki.math;
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
+
import static org.junit.Assert.assertEquals;
import java.util.Arrays;
diff --git a/test/de/lmu/ifi/dbs/elki/math/TestLevenbergMarquardtGaussianFitting.java b/test/de/lmu/ifi/dbs/elki/math/TestLevenbergMarquardtGaussianFitting.java
index 49c84996..46676c9b 100644
--- a/test/de/lmu/ifi/dbs/elki/math/TestLevenbergMarquardtGaussianFitting.java
+++ b/test/de/lmu/ifi/dbs/elki/math/TestLevenbergMarquardtGaussianFitting.java
@@ -1,5 +1,28 @@
package de.lmu.ifi.dbs.elki.math;
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
+
import static org.junit.Assert.assertEquals;
import org.junit.Test;
diff --git a/test/de/lmu/ifi/dbs/elki/math/TestMatrix.java b/test/de/lmu/ifi/dbs/elki/math/TestMatrix.java
index 49042ceb..0d22d19a 100644
--- a/test/de/lmu/ifi/dbs/elki/math/TestMatrix.java
+++ b/test/de/lmu/ifi/dbs/elki/math/TestMatrix.java
@@ -1,5 +1,28 @@
package de.lmu.ifi.dbs.elki.math;
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
+
import java.util.Random;
import org.junit.Test;
@@ -38,7 +61,7 @@ public class TestMatrix implements JUnit4Test {
org.junit.Assert.assertTrue("A.transposeTimesTranspose(B) does not equal (B.times(A)).transpose", B.times(A).transpose().almostEquals(AT_BT));
org.junit.Assert.assertTrue("A.transposeTimesTranspose(B) does not equal A.transpose.times(B.transpose)", A.transposeTimesTranspose(B).almostEquals(AT_BT));
}
-
+
private void randomizedTestAsymmetric() {
Random r = new Random();
int dim1 = r.nextInt(30) + 10;
diff --git a/test/de/lmu/ifi/dbs/elki/math/TestQuickSelect.java b/test/de/lmu/ifi/dbs/elki/math/TestQuickSelect.java
index 36ed4521..132be182 100644
--- a/test/de/lmu/ifi/dbs/elki/math/TestQuickSelect.java
+++ b/test/de/lmu/ifi/dbs/elki/math/TestQuickSelect.java
@@ -1,5 +1,28 @@
package de.lmu.ifi.dbs.elki.math;
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
+
import static org.junit.Assert.assertEquals;
import java.util.Arrays;
@@ -81,7 +104,6 @@ public class TestQuickSelect implements JUnit4Test {
assertEquals("Full median incorrect.", 0.95, QuickSelect.median(data), Double.MIN_VALUE);
}
-
@Test
public void testTies() {
double data[] = new double[] { 0.1, 0.1, 0.9, 0.9, 0.5, 0.9, 0.1, 0.1, 0.1, 0.9, 0.9, 0.9, 0.9, 0.1, 0.1 };
diff --git a/test/de/lmu/ifi/dbs/elki/math/TestReplacingHistogram.java b/test/de/lmu/ifi/dbs/elki/math/TestReplacingHistogram.java
index e9e505d2..266a437f 100644
--- a/test/de/lmu/ifi/dbs/elki/math/TestReplacingHistogram.java
+++ b/test/de/lmu/ifi/dbs/elki/math/TestReplacingHistogram.java
@@ -1,5 +1,28 @@
package de.lmu.ifi.dbs.elki.math;
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
+
import static org.junit.Assert.assertArrayEquals;
import static org.junit.Assert.assertEquals;
@@ -10,13 +33,14 @@ import de.lmu.ifi.dbs.elki.utilities.pairs.Pair;
/**
* JUnit test to test the {@link ReplacingHistogram} class.
+ *
* @author Erich Schubert
*/
public class TestReplacingHistogram implements JUnit4Test {
ReplacingHistogram<Double> hist;
/**
- * Test that adds some data to the histogram and compares results.
+ * Test that adds some data to the histogram and compares results.
*/
@Test
public final void testHistogram() {
@@ -39,10 +63,10 @@ public class TestReplacingHistogram implements JUnit4Test {
hist.replace(-.13, -1.23 + hist.get(-.13));
hist.replace(1.13, -4.56 + hist.get(1.13));
assertArrayEquals("Resized histogram doesn't match", resized, hist.getData().toArray(new Double[0]));
-
+
// compare results via Iterator.
int off = 0;
- for (Pair<Double, Double> pair : hist) {
+ for(Pair<Double, Double> pair : hist) {
assertEquals("Array iterator bin position", -0.15 + 0.1 * off, pair.getFirst(), 0.00001);
assertEquals("Array iterator bin contents", resized[off], pair.getSecond(), 0.00001);
off++;
diff --git a/test/de/lmu/ifi/dbs/elki/math/TestWeightFunctions.java b/test/de/lmu/ifi/dbs/elki/math/TestWeightFunctions.java
index 8164e28e..f07be82a 100644
--- a/test/de/lmu/ifi/dbs/elki/math/TestWeightFunctions.java
+++ b/test/de/lmu/ifi/dbs/elki/math/TestWeightFunctions.java
@@ -1,5 +1,28 @@
package de.lmu.ifi.dbs.elki.math;
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
+
import static org.junit.Assert.assertEquals;
import org.junit.Test;
@@ -16,8 +39,9 @@ import de.lmu.ifi.dbs.elki.math.linearalgebra.pca.weightfunctions.WeightFunction
/**
* JUnit test to assert consistency of a couple of Weight functions
+ *
* @author Erich Schubert
- *
+ *
*/
public class TestWeightFunctions implements JUnit4Test {
/**
@@ -25,30 +49,26 @@ public class TestWeightFunctions implements JUnit4Test {
*/
@Test
public void testGetWeight() {
- WeightFunction[] wf = {new ConstantWeight(), new ErfcWeight(), new ErfcStddevWeight(),
- new GaussWeight(), new GaussStddevWeight(), new LinearWeight(), new ExponentialWeight()};
- double[] at0 = {1.0, 1.0, 1.0, 1.0, 0.3989422804014327, 1.0, 1.0};
- double[] at01 = {1.0, 0.8693490686884612, 0.920344325445942, 0.9772372209558107,
- 0.3969525474770118, 0.91, 0.7943282347242815};
- double[] at09 = {1.0, 0.13877499454059491, 0.36812025069351895, 0.15488166189124816,
- 0.2660852498987548, 0.18999999999999995, 0.12589254117941673};
- double[] at10 = {1.0, 0.10000000000000016, 0.317310507862914, 0.10000000000000002,
- 0.24197072451914337, 0.09999999999999998, 0.10000000000000002};
-
- assert(wf.length == at0.length);
- assert(wf.length == at01.length);
- assert(wf.length == at09.length);
- assert(wf.length == at10.length);
-
- for (int i=0; i < wf.length; i++) {
+ WeightFunction[] wf = { new ConstantWeight(), new ErfcWeight(), new ErfcStddevWeight(), new GaussWeight(), new GaussStddevWeight(), new LinearWeight(), new ExponentialWeight() };
+ double[] at0 = { 1.0, 1.0, 1.0, 1.0, 0.3989422804014327, 1.0, 1.0 };
+ double[] at01 = { 1.0, 0.8693490686884612, 0.920344325445942, 0.9772372209558107, 0.3969525474770118, 0.91, 0.7943282347242815 };
+ double[] at09 = { 1.0, 0.13877499454059491, 0.36812025069351895, 0.15488166189124816, 0.2660852498987548, 0.18999999999999995, 0.12589254117941673 };
+ double[] at10 = { 1.0, 0.10000000000000016, 0.317310507862914, 0.10000000000000002, 0.24197072451914337, 0.09999999999999998, 0.10000000000000002 };
+
+ assert (wf.length == at0.length);
+ assert (wf.length == at01.length);
+ assert (wf.length == at09.length);
+ assert (wf.length == at10.length);
+
+ for(int i = 0; i < wf.length; i++) {
double val0 = wf[i].getWeight(0, 1, 1);
double val01 = wf[i].getWeight(0.1, 1, 1);
double val09 = wf[i].getWeight(0.9, 1, 1);
double val10 = wf[i].getWeight(1.0, 1, 1);
- assertEquals(wf[i].getClass().getSimpleName()+" at 0.0", at0[i], val0, Double.MIN_VALUE);
- assertEquals(wf[i].getClass().getSimpleName()+" at 0.1", at01[i], val01, Double.MIN_VALUE);
- assertEquals(wf[i].getClass().getSimpleName()+" at 0.9", at09[i], val09, Double.MIN_VALUE);
- assertEquals(wf[i].getClass().getSimpleName()+" at 1.0", at10[i], val10, Double.MIN_VALUE);
+ assertEquals(wf[i].getClass().getSimpleName() + " at 0.0", at0[i], val0, Double.MIN_VALUE);
+ assertEquals(wf[i].getClass().getSimpleName() + " at 0.1", at01[i], val01, Double.MIN_VALUE);
+ assertEquals(wf[i].getClass().getSimpleName() + " at 0.9", at09[i], val09, Double.MIN_VALUE);
+ assertEquals(wf[i].getClass().getSimpleName() + " at 1.0", at10[i], val10, Double.MIN_VALUE);
}
}
diff --git a/test/de/lmu/ifi/dbs/elki/persistent/TestByteArrayUtil.java b/test/de/lmu/ifi/dbs/elki/persistent/TestByteArrayUtil.java
index 7cd14c14..769b3fe2 100644
--- a/test/de/lmu/ifi/dbs/elki/persistent/TestByteArrayUtil.java
+++ b/test/de/lmu/ifi/dbs/elki/persistent/TestByteArrayUtil.java
@@ -1,5 +1,28 @@
package de.lmu.ifi.dbs.elki.persistent;
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
+
import java.nio.ByteBuffer;
import org.junit.Assert;
diff --git a/test/de/lmu/ifi/dbs/elki/persistent/TestOnDiskArray.java b/test/de/lmu/ifi/dbs/elki/persistent/TestOnDiskArray.java
index 67a51d0d..910e4898 100644
--- a/test/de/lmu/ifi/dbs/elki/persistent/TestOnDiskArray.java
+++ b/test/de/lmu/ifi/dbs/elki/persistent/TestOnDiskArray.java
@@ -1,5 +1,28 @@
package de.lmu.ifi.dbs.elki.persistent;
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
+
import java.io.File;
import java.io.IOException;
import java.nio.ByteBuffer;
diff --git a/test/de/lmu/ifi/dbs/elki/persistent/TestOnDiskUpperTriangleMatrix.java b/test/de/lmu/ifi/dbs/elki/persistent/TestOnDiskUpperTriangleMatrix.java
index e076da1a..2690a651 100644
--- a/test/de/lmu/ifi/dbs/elki/persistent/TestOnDiskUpperTriangleMatrix.java
+++ b/test/de/lmu/ifi/dbs/elki/persistent/TestOnDiskUpperTriangleMatrix.java
@@ -1,5 +1,28 @@
package de.lmu.ifi.dbs.elki.persistent;
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
+
import java.io.File;
import java.io.IOException;
@@ -12,8 +35,9 @@ import de.lmu.ifi.dbs.elki.JUnit4Test;
/**
* Test the on-disk OnDiskUpperTriangleMatrix class.
+ *
* @author Erich Schubert
- *
+ *
*/
// TODO: also test with a static sample file.
public class TestOnDiskUpperTriangleMatrix implements JUnit4Test {
@@ -21,6 +45,7 @@ public class TestOnDiskUpperTriangleMatrix implements JUnit4Test {
/**
* Check that we don't overwrite any file.
+ *
* @throws Exception on errors.
*/
@Before
@@ -32,6 +57,7 @@ public class TestOnDiskUpperTriangleMatrix implements JUnit4Test {
/**
* Clean up afterwards
+ *
* @throws Exception on errors.
*/
@After
@@ -45,6 +71,7 @@ public class TestOnDiskUpperTriangleMatrix implements JUnit4Test {
/**
* Test the ondisk triangle matrix
+ *
* @throws IOException on errors.
*/
@Test
@@ -74,21 +101,21 @@ public class TestOnDiskUpperTriangleMatrix implements JUnit4Test {
OnDiskUpperTriangleMatrix roarray = new OnDiskUpperTriangleMatrix(file, 1, extraheadersize, recsize, false);
Assert.assertEquals("Number of records incorrect.", matsize, roarray.getMatrixSize());
-
+
byte[] buf = new byte[recsize];
- roarray.getRecordBuffer(0,0).get(buf);
+ roarray.getRecordBuffer(0, 0).get(buf);
Assert.assertArrayEquals("Record 0,0 doesn't match.", record1, buf);
- roarray.getRecordBuffer(0,1).get(buf);
+ roarray.getRecordBuffer(0, 1).get(buf);
Assert.assertArrayEquals("Record 0,1 doesn't match.", record2, buf);
- roarray.getRecordBuffer(1,1).get(buf);
+ roarray.getRecordBuffer(1, 1).get(buf);
Assert.assertArrayEquals("Record 1,1 doesn't match.", record3, buf);
- roarray.getRecordBuffer(1,0).get(buf);
+ roarray.getRecordBuffer(1, 0).get(buf);
Assert.assertArrayEquals("Record 1,0 doesn't match.", record2, buf);
- roarray.getRecordBuffer(0,2).get(buf);
+ roarray.getRecordBuffer(0, 2).get(buf);
Assert.assertArrayEquals("Record 0,2 doesn't match.", record3, buf);
- roarray.getRecordBuffer(1,2).get(buf);
+ roarray.getRecordBuffer(1, 2).get(buf);
Assert.assertArrayEquals("Record 1,2 doesn't match.", record2, buf);
- roarray.getRecordBuffer(2,2).get(buf);
+ roarray.getRecordBuffer(2, 2).get(buf);
Assert.assertArrayEquals("Record 2,2 doesn't match.", record1, buf);
}
}
diff --git a/test/de/lmu/ifi/dbs/elki/utilities/datastructures/TestHeap.java b/test/de/lmu/ifi/dbs/elki/utilities/datastructures/TestHeap.java
index 44c84f83..fcdc28d2 100644
--- a/test/de/lmu/ifi/dbs/elki/utilities/datastructures/TestHeap.java
+++ b/test/de/lmu/ifi/dbs/elki/utilities/datastructures/TestHeap.java
@@ -1,5 +1,28 @@
package de.lmu.ifi.dbs.elki.utilities.datastructures;
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
+
import static org.junit.Assert.assertEquals;
import java.util.Collections;
@@ -31,11 +54,11 @@ public class TestHeap {
}
for(int i = 0; i < asc.length; i++) {
final Integer gota = hasc.poll();
- assertEquals("Objects sorted incorrectly at ascending position "+i, asc[i], gota);
+ assertEquals("Objects sorted incorrectly at ascending position " + i, asc[i], gota);
}
for(int i = 0; i < desc.length; i++) {
final Integer gotd = hdesc.poll();
- assertEquals("Objects sorted incorrectly at descending position "+i, desc[i], gotd);
+ assertEquals("Objects sorted incorrectly at descending position " + i, desc[i], gotd);
}
}
}
diff --git a/test/de/lmu/ifi/dbs/elki/utilities/datastructures/TestTiedTopBoundedHeap.java b/test/de/lmu/ifi/dbs/elki/utilities/datastructures/TestTiedTopBoundedHeap.java
index 829c5880..cb4492b8 100644
--- a/test/de/lmu/ifi/dbs/elki/utilities/datastructures/TestTiedTopBoundedHeap.java
+++ b/test/de/lmu/ifi/dbs/elki/utilities/datastructures/TestTiedTopBoundedHeap.java
@@ -1,5 +1,28 @@
package de.lmu.ifi.dbs.elki.utilities.datastructures;
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
+
import static org.junit.Assert.assertEquals;
import java.util.Collections;
@@ -29,18 +52,19 @@ public class TestTiedTopBoundedHeap {
hasc.add(i);
hdesc.add(i);
}
- //LoggingUtil.warning("Heap: "+hasc.toString()+ " -- "+hdesc.toString());
+ // LoggingUtil.warning("Heap: "+hasc.toString()+ " -- "+hdesc.toString());
assertEquals("Ascending heap size doesn't match", asc.length, hasc.size());
assertEquals("Descending heap size doesn't match", desc.length, hdesc.size());
for(int i = 0; i < asc.length; i++) {
final Integer gota = hasc.poll();
- assertEquals("Objects sorted incorrectly at ascending position "+i, asc[i], gota);
+ assertEquals("Objects sorted incorrectly at ascending position " + i, asc[i], gota);
}
for(int i = 0; i < desc.length; i++) {
final Integer gotd = hdesc.poll();
- assertEquals("Objects sorted incorrectly at descending position "+i, desc[i], gotd);
+ assertEquals("Objects sorted incorrectly at descending position " + i, desc[i], gotd);
}
}
+
/**
* Test bounded heap
*/
diff --git a/test/de/lmu/ifi/dbs/elki/utilities/datastructures/TestTopBoundedHeap.java b/test/de/lmu/ifi/dbs/elki/utilities/datastructures/TestTopBoundedHeap.java
index c1fc3a66..f0160d5e 100644
--- a/test/de/lmu/ifi/dbs/elki/utilities/datastructures/TestTopBoundedHeap.java
+++ b/test/de/lmu/ifi/dbs/elki/utilities/datastructures/TestTopBoundedHeap.java
@@ -1,5 +1,28 @@
package de.lmu.ifi.dbs.elki.utilities.datastructures;
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
+
import static org.junit.Assert.assertEquals;
import java.util.Collections;
@@ -31,11 +54,11 @@ public class TestTopBoundedHeap {
}
for(int i = 0; i < asc.length; i++) {
final Integer gota = hasc.poll();
- assertEquals("Objects sorted incorrectly at ascending position "+i, asc[i], gota);
+ assertEquals("Objects sorted incorrectly at ascending position " + i, asc[i], gota);
}
for(int i = 0; i < desc.length; i++) {
final Integer gotd = hdesc.poll();
- assertEquals("Objects sorted incorrectly at descending position "+i, desc[i], gotd);
+ assertEquals("Objects sorted incorrectly at descending position " + i, desc[i], gotd);
}
}
}
diff --git a/test/de/lmu/ifi/dbs/elki/visualization/TestLinearScale.java b/test/de/lmu/ifi/dbs/elki/visualization/TestLinearScale.java
index 8a303f4c..e4ca972b 100644
--- a/test/de/lmu/ifi/dbs/elki/visualization/TestLinearScale.java
+++ b/test/de/lmu/ifi/dbs/elki/visualization/TestLinearScale.java
@@ -1,5 +1,28 @@
package de.lmu.ifi.dbs.elki.visualization;
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2011
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
+
import static org.junit.Assert.assertEquals;
import org.junit.Test;
@@ -7,24 +30,24 @@ import org.junit.Test;
import de.lmu.ifi.dbs.elki.JUnit4Test;
import de.lmu.ifi.dbs.elki.visualization.scales.LinearScale;
-
/**
* Test class to test rounding of the linear scale.
*
* @author Erich Schubert
- *
+ *
*/
public class TestLinearScale implements JUnit4Test {
/**
- * Produces a simple linear scale and verifies the tick lines are placed as expected.
+ * Produces a simple linear scale and verifies the tick lines are placed as
+ * expected.
*/
@Test
public final void testLinearScale() {
- LinearScale a = new LinearScale(3,97);
+ LinearScale a = new LinearScale(3, 97);
assertEquals("Minimum for scale 3-97 not as expected.", 0.0, a.getMin(), Double.MIN_VALUE);
assertEquals("Maximum for scale 3-97 not as expected.", 100.0, a.getMax(), Double.MIN_VALUE);
-
+
LinearScale b = new LinearScale(-97, -3);
assertEquals("Minimum for scale -97 : -3 not as expected.", -100.0, b.getMin(), Double.MIN_VALUE);
assertEquals("Maximum for scale -97 : -3 not as expected.", 0.0, b.getMax(), Double.MIN_VALUE);
@@ -32,7 +55,7 @@ public class TestLinearScale implements JUnit4Test {
LinearScale c = new LinearScale(-3, 37);
assertEquals("Minimum for scale -3 : 37 not as expected.", -10.0, c.getMin(), Double.MIN_VALUE);
assertEquals("Maximum for scale -3 : 37 not as expected.", 40.0, c.getMax(), Double.MIN_VALUE);
-
+
LinearScale d = new LinearScale(-37, 3);
assertEquals("Minimum for scale -37 : 3 not as expected.", -40.0, d.getMin(), Double.MIN_VALUE);
assertEquals("Maximum for scale -37 : 3 not as expected.", 10.0, d.getMax(), Double.MIN_VALUE);