summaryrefslogtreecommitdiff
path: root/elki/src/test/java/de/lmu/ifi/dbs/elki/algorithm/clustering/optics/OPTICSHeapTest.java
diff options
context:
space:
mode:
Diffstat (limited to 'elki/src/test/java/de/lmu/ifi/dbs/elki/algorithm/clustering/optics/OPTICSHeapTest.java')
-rw-r--r--elki/src/test/java/de/lmu/ifi/dbs/elki/algorithm/clustering/optics/OPTICSHeapTest.java71
1 files changed, 71 insertions, 0 deletions
diff --git a/elki/src/test/java/de/lmu/ifi/dbs/elki/algorithm/clustering/optics/OPTICSHeapTest.java b/elki/src/test/java/de/lmu/ifi/dbs/elki/algorithm/clustering/optics/OPTICSHeapTest.java
new file mode 100644
index 00000000..d47e5ea2
--- /dev/null
+++ b/elki/src/test/java/de/lmu/ifi/dbs/elki/algorithm/clustering/optics/OPTICSHeapTest.java
@@ -0,0 +1,71 @@
+package de.lmu.ifi.dbs.elki.algorithm.clustering.optics;
+
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2015
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
+
+import org.junit.Test;
+
+import de.lmu.ifi.dbs.elki.JUnit4Test;
+import de.lmu.ifi.dbs.elki.algorithm.AbstractSimpleAlgorithmTest;
+import de.lmu.ifi.dbs.elki.data.Clustering;
+import de.lmu.ifi.dbs.elki.database.Database;
+import de.lmu.ifi.dbs.elki.utilities.ClassGenericsUtil;
+import de.lmu.ifi.dbs.elki.utilities.optionhandling.ParameterException;
+import de.lmu.ifi.dbs.elki.utilities.optionhandling.parameterization.ListParameterization;
+
+/**
+ * Performs a full OPTICS run, and compares the result with a clustering derived
+ * from the data set labels. This test ensures that OPTICS's performance doesn't
+ * unexpectedly drop on this data set (and also ensures that the algorithms
+ * work, as a side effect).
+ *
+ * @author Katharina Rausch
+ * @author Erich Schubert
+ * @since 0.4.0
+ */
+public class OPTICSHeapTest extends AbstractSimpleAlgorithmTest implements JUnit4Test {
+ /**
+ * Run OPTICS with fixed parameters and compare the result to a golden
+ * standard.
+ *
+ * @throws ParameterException
+ */
+ @Test
+ public void testOPTICSResults() {
+ Database db = makeSimpleDatabase(UNITTEST + "hierarchical-2d.ascii", 710);
+
+ // Setup algorithm
+ ListParameterization params = new ListParameterization();
+ params.addParameter(OPTICSHeap.Parameterizer.MINPTS_ID, 18);
+ params.addParameter(OPTICSXi.Parameterizer.XI_ID, 0.038);
+ params.addParameter(OPTICSXi.Parameterizer.XIALG_ID, OPTICSHeap.class);
+ OPTICSXi opticsxi = ClassGenericsUtil.parameterizeOrAbort(OPTICSXi.class, params);
+ testParameterizationOk(params);
+
+ // run OPTICS on database
+ Clustering<?> clustering = opticsxi.run(db);
+
+ testFMeasure(db, clustering, 0.877117490049);
+ testClusterSizes(clustering, new int[] { 109, 121, 209, 271 });
+ }
+} \ No newline at end of file