diff options
Diffstat (limited to 'src/META-INF')
61 files changed, 684 insertions, 24 deletions
diff --git a/src/META-INF/MANIFEST.MF b/src/META-INF/MANIFEST.MF index 7ec310dc..1746b30f 100644 --- a/src/META-INF/MANIFEST.MF +++ b/src/META-INF/MANIFEST.MF @@ -167,27 +167,8 @@ Implementation-Version: 1.1 Implementation-Vendor: World Wide Web Consortium Implementation-URL: http://www.w3.org/TR/SVG11/java.html -Name: org/apache/avalon -Comment: Apache Avalon from FOP PDF Transcoder package -Implementation-Title: Apache Avalon -Implementation-Vendor: Apache Software Foundation -Implementation-URL: http://avalon.apache.org/ - -Name: org/apache/fop -Comment: FOP PDF Transcoder package for Apache Batik -Implementation-Title: FOP PDF Transcoder package -Implementation-Version: 1.0beta2 -Implementation-Vendor: Apache Software Foundation -Implementation-URL: http://xmlgraphics.apache.org/fop/ - -Name: org/apache/commons/io -Comment: Apache Commons IO from FOP Transcoder package -Implementation-Title: Apache Commons IO -Implementation-Vendor: Apache Software Foundation -Implementation-URL: http://commons.apache.org/io/ - -Name: org/apache/commons/logging -Comment: Apache Commons Logging from FOP Transcoder package -Implementation-Title: Apache Commons Logging -Implementation-Vendor: Apache Software Foundation -Implementation-URL: http://commons.apache.org/logging/ +Name: gnu/trove +Comment: GNU Trove +Implementation-Title: Trove +Implementation-Version: 3.0.1 +Implementation-URL: http://trove4j.sourceforge.net/ diff --git a/src/META-INF/elki/de.lmu.ifi.dbs.elki.algorithm.AbstractDistanceBasedAlgorithm b/src/META-INF/elki/de.lmu.ifi.dbs.elki.algorithm.AbstractDistanceBasedAlgorithm new file mode 100644 index 00000000..dd8d4482 --- /dev/null +++ b/src/META-INF/elki/de.lmu.ifi.dbs.elki.algorithm.AbstractDistanceBasedAlgorithm @@ -0,0 +1,24 @@ +de.lmu.ifi.dbs.elki.algorithm.KNNDistanceOrder +de.lmu.ifi.dbs.elki.algorithm.KNNJoin +de.lmu.ifi.dbs.elki.algorithm.MaterializeDistances +de.lmu.ifi.dbs.elki.algorithm.clustering.DBSCAN +de.lmu.ifi.dbs.elki.algorithm.clustering.OPTICS +de.lmu.ifi.dbs.elki.algorithm.clustering.DeLiClu +de.lmu.ifi.dbs.elki.algorithm.clustering.SLINK +de.lmu.ifi.dbs.elki.algorithm.clustering.correlation.HiCO +de.lmu.ifi.dbs.elki.algorithm.clustering.subspace.HiSC +de.lmu.ifi.dbs.elki.algorithm.outlier.ABOD +de.lmu.ifi.dbs.elki.algorithm.outlier.DBOutlierDetection +de.lmu.ifi.dbs.elki.algorithm.outlier.DBOutlierScore +de.lmu.ifi.dbs.elki.algorithm.outlier.INFLO +de.lmu.ifi.dbs.elki.algorithm.outlier.KNNOutlier +de.lmu.ifi.dbs.elki.algorithm.outlier.KNNWeightOutlier +de.lmu.ifi.dbs.elki.algorithm.outlier.LDOF +de.lmu.ifi.dbs.elki.algorithm.outlier.LOCI +de.lmu.ifi.dbs.elki.algorithm.outlier.OPTICSOF +de.lmu.ifi.dbs.elki.algorithm.outlier.spatial.CTLuGLSBackwardSearchAlgorithm +de.lmu.ifi.dbs.elki.algorithm.outlier.spatial.CTLuRandomWalkEC +de.lmu.ifi.dbs.elki.algorithm.statistics.AveragePrecisionAtK +de.lmu.ifi.dbs.elki.algorithm.statistics.RankingQualityHistogram +de.lmu.ifi.dbs.elki.algorithm.statistics.DistanceStatisticsWithClasses +de.lmu.ifi.dbs.elki.algorithm.statistics.EvaluateRankingQuality diff --git a/src/META-INF/elki/de.lmu.ifi.dbs.elki.algorithm.AbstractPrimitiveDistanceBasedAlgorithm b/src/META-INF/elki/de.lmu.ifi.dbs.elki.algorithm.AbstractPrimitiveDistanceBasedAlgorithm new file mode 100644 index 00000000..375277a4 --- /dev/null +++ b/src/META-INF/elki/de.lmu.ifi.dbs.elki.algorithm.AbstractPrimitiveDistanceBasedAlgorithm @@ -0,0 +1,3 @@ +de.lmu.ifi.dbs.elki.algorithm.DependencyDerivator +de.lmu.ifi.dbs.elki.algorithm.clustering.kmeans.KMeansLloyd +de.lmu.ifi.dbs.elki.algorithm.clustering.kmeans.KMeansMacQueen diff --git a/src/META-INF/elki/de.lmu.ifi.dbs.elki.algorithm.Algorithm b/src/META-INF/elki/de.lmu.ifi.dbs.elki.algorithm.Algorithm new file mode 100644 index 00000000..466a746a --- /dev/null +++ b/src/META-INF/elki/de.lmu.ifi.dbs.elki.algorithm.Algorithm @@ -0,0 +1,76 @@ +de.lmu.ifi.dbs.elki.algorithm.NullAlgorithm +de.lmu.ifi.dbs.elki.algorithm.clustering.DBSCAN +de.lmu.ifi.dbs.elki.algorithm.clustering.DeLiClu +de.lmu.ifi.dbs.elki.algorithm.clustering.EM +de.lmu.ifi.dbs.elki.algorithm.clustering.kmeans.KMeansLloyd +de.lmu.ifi.dbs.elki.algorithm.clustering.kmeans.KMeansMacQueen +de.lmu.ifi.dbs.elki.algorithm.clustering.OPTICSXi +de.lmu.ifi.dbs.elki.algorithm.clustering.OPTICS +de.lmu.ifi.dbs.elki.algorithm.clustering.SLINK +de.lmu.ifi.dbs.elki.algorithm.clustering.SNNClustering +de.lmu.ifi.dbs.elki.algorithm.clustering.correlation.CASH +de.lmu.ifi.dbs.elki.algorithm.clustering.correlation.COPAC +de.lmu.ifi.dbs.elki.algorithm.clustering.correlation.ERiC +de.lmu.ifi.dbs.elki.algorithm.clustering.correlation.FourC +de.lmu.ifi.dbs.elki.algorithm.clustering.correlation.HiCO +de.lmu.ifi.dbs.elki.algorithm.clustering.correlation.LMCLUS +de.lmu.ifi.dbs.elki.algorithm.clustering.correlation.ORCLUS +de.lmu.ifi.dbs.elki.algorithm.clustering.subspace.CLIQUE +de.lmu.ifi.dbs.elki.algorithm.clustering.subspace.DiSH +de.lmu.ifi.dbs.elki.algorithm.clustering.subspace.HiSC +de.lmu.ifi.dbs.elki.algorithm.clustering.subspace.PreDeCon +de.lmu.ifi.dbs.elki.algorithm.clustering.subspace.PROCLUS +de.lmu.ifi.dbs.elki.algorithm.clustering.subspace.SUBCLU +de.lmu.ifi.dbs.elki.algorithm.clustering.trivial.ByLabelClustering +de.lmu.ifi.dbs.elki.algorithm.clustering.trivial.ByLabelHierarchicalClustering +de.lmu.ifi.dbs.elki.algorithm.clustering.trivial.ByModelClustering +de.lmu.ifi.dbs.elki.algorithm.clustering.trivial.TrivialAllInOne +de.lmu.ifi.dbs.elki.algorithm.clustering.trivial.TrivialAllNoise +de.lmu.ifi.dbs.elki.algorithm.outlier.ABOD +de.lmu.ifi.dbs.elki.algorithm.outlier.AggarwalYuEvolutionary +de.lmu.ifi.dbs.elki.algorithm.outlier.AggarwalYuNaive +de.lmu.ifi.dbs.elki.algorithm.outlier.DBOutlierDetection +de.lmu.ifi.dbs.elki.algorithm.outlier.DBOutlierScore +de.lmu.ifi.dbs.elki.algorithm.outlier.EMOutlier +de.lmu.ifi.dbs.elki.algorithm.outlier.GaussianModel +de.lmu.ifi.dbs.elki.algorithm.outlier.GaussianUniformMixture +de.lmu.ifi.dbs.elki.algorithm.outlier.INFLO +de.lmu.ifi.dbs.elki.algorithm.outlier.KNNOutlier +de.lmu.ifi.dbs.elki.algorithm.outlier.KNNWeightOutlier +de.lmu.ifi.dbs.elki.algorithm.outlier.LDOF +de.lmu.ifi.dbs.elki.algorithm.outlier.LOCI +de.lmu.ifi.dbs.elki.algorithm.outlier.LOF +de.lmu.ifi.dbs.elki.algorithm.outlier.LoOP +de.lmu.ifi.dbs.elki.algorithm.outlier.OPTICSOF +de.lmu.ifi.dbs.elki.algorithm.outlier.OUTRES +de.lmu.ifi.dbs.elki.algorithm.outlier.ReferenceBasedOutlierDetection +de.lmu.ifi.dbs.elki.algorithm.outlier.SOD +de.lmu.ifi.dbs.elki.algorithm.outlier.OnlineLOF +de.lmu.ifi.dbs.elki.algorithm.outlier.spatial.CTLuGLSBackwardSearchAlgorithm +de.lmu.ifi.dbs.elki.algorithm.outlier.spatial.CTLuMeanMultipleAttributes +de.lmu.ifi.dbs.elki.algorithm.outlier.spatial.CTLuMedianAlgorithm +de.lmu.ifi.dbs.elki.algorithm.outlier.spatial.CTLuMedianMultipleAttributes +de.lmu.ifi.dbs.elki.algorithm.outlier.spatial.CTLuMoranScatterplotOutlier +de.lmu.ifi.dbs.elki.algorithm.outlier.spatial.CTLuRandomWalkEC +de.lmu.ifi.dbs.elki.algorithm.outlier.spatial.CTLuScatterplotOutlier +de.lmu.ifi.dbs.elki.algorithm.outlier.spatial.CTLuZTestOutlier +de.lmu.ifi.dbs.elki.algorithm.outlier.spatial.SLOM +de.lmu.ifi.dbs.elki.algorithm.outlier.spatial.SOF +de.lmu.ifi.dbs.elki.algorithm.outlier.spatial.TrimmedMeanApproach +de.lmu.ifi.dbs.elki.algorithm.outlier.meta.ExternalDoubleOutlierScore +de.lmu.ifi.dbs.elki.algorithm.outlier.meta.FeatureBagging +de.lmu.ifi.dbs.elki.algorithm.outlier.meta.RescaleMetaOutlierAlgorithm +de.lmu.ifi.dbs.elki.algorithm.outlier.trivial.ByLabelOutlier +de.lmu.ifi.dbs.elki.algorithm.outlier.trivial.TrivialAllOutlier +de.lmu.ifi.dbs.elki.algorithm.outlier.trivial.TrivialNoOutlier +de.lmu.ifi.dbs.elki.algorithm.outlier.trivial.TrivialGeneratedOutlier +de.lmu.ifi.dbs.elki.algorithm.statistics.AveragePrecisionAtK +de.lmu.ifi.dbs.elki.algorithm.statistics.EvaluateRankingQuality +de.lmu.ifi.dbs.elki.algorithm.statistics.RankingQualityHistogram +de.lmu.ifi.dbs.elki.algorithm.statistics.DistanceStatisticsWithClasses +# de.lmu.ifi.dbs.elki.algorithm.DummyAlgorithm +de.lmu.ifi.dbs.elki.algorithm.APRIORI +de.lmu.ifi.dbs.elki.algorithm.DependencyDerivator +de.lmu.ifi.dbs.elki.algorithm.KNNDistanceOrder +de.lmu.ifi.dbs.elki.algorithm.KNNJoin +de.lmu.ifi.dbs.elki.algorithm.MaterializeDistances diff --git a/src/META-INF/elki/de.lmu.ifi.dbs.elki.algorithm.clustering.ClusteringAlgorithm b/src/META-INF/elki/de.lmu.ifi.dbs.elki.algorithm.clustering.ClusteringAlgorithm new file mode 100644 index 00000000..f429b53e --- /dev/null +++ b/src/META-INF/elki/de.lmu.ifi.dbs.elki.algorithm.clustering.ClusteringAlgorithm @@ -0,0 +1,21 @@ +de.lmu.ifi.dbs.elki.algorithm.clustering.DBSCAN +de.lmu.ifi.dbs.elki.algorithm.clustering.EM +de.lmu.ifi.dbs.elki.algorithm.clustering.kmeans.KMeansLloyd +de.lmu.ifi.dbs.elki.algorithm.clustering.kmeans.KMeansMacQueen +de.lmu.ifi.dbs.elki.algorithm.clustering.OPTICSXi +de.lmu.ifi.dbs.elki.algorithm.clustering.SNNClustering +de.lmu.ifi.dbs.elki.algorithm.clustering.correlation.CASH +de.lmu.ifi.dbs.elki.algorithm.clustering.correlation.COPAC +de.lmu.ifi.dbs.elki.algorithm.clustering.correlation.ERiC +de.lmu.ifi.dbs.elki.algorithm.clustering.correlation.FourC +de.lmu.ifi.dbs.elki.algorithm.clustering.correlation.ORCLUS +de.lmu.ifi.dbs.elki.algorithm.clustering.subspace.CLIQUE +de.lmu.ifi.dbs.elki.algorithm.clustering.subspace.DiSH +de.lmu.ifi.dbs.elki.algorithm.clustering.subspace.PreDeCon +de.lmu.ifi.dbs.elki.algorithm.clustering.subspace.PROCLUS +de.lmu.ifi.dbs.elki.algorithm.clustering.subspace.SUBCLU +de.lmu.ifi.dbs.elki.algorithm.clustering.trivial.ByLabelClustering +de.lmu.ifi.dbs.elki.algorithm.clustering.trivial.ByLabelHierarchicalClustering +de.lmu.ifi.dbs.elki.algorithm.clustering.trivial.ByModelClustering +de.lmu.ifi.dbs.elki.algorithm.clustering.trivial.TrivialAllInOne +de.lmu.ifi.dbs.elki.algorithm.clustering.trivial.TrivialAllNoise diff --git a/src/META-INF/elki/de.lmu.ifi.dbs.elki.algorithm.clustering.OPTICSTypeAlgorithm b/src/META-INF/elki/de.lmu.ifi.dbs.elki.algorithm.clustering.OPTICSTypeAlgorithm new file mode 100644 index 00000000..98ae4fdb --- /dev/null +++ b/src/META-INF/elki/de.lmu.ifi.dbs.elki.algorithm.clustering.OPTICSTypeAlgorithm @@ -0,0 +1,4 @@ +de.lmu.ifi.dbs.elki.algorithm.clustering.OPTICS +de.lmu.ifi.dbs.elki.algorithm.clustering.DeLiClu +de.lmu.ifi.dbs.elki.algorithm.clustering.correlation.HiCO +de.lmu.ifi.dbs.elki.algorithm.clustering.subspace.HiSC diff --git a/src/META-INF/elki/de.lmu.ifi.dbs.elki.algorithm.clustering.kmeans.KMeansInitialization b/src/META-INF/elki/de.lmu.ifi.dbs.elki.algorithm.clustering.kmeans.KMeansInitialization new file mode 100644 index 00000000..b5006bd4 --- /dev/null +++ b/src/META-INF/elki/de.lmu.ifi.dbs.elki.algorithm.clustering.kmeans.KMeansInitialization @@ -0,0 +1,4 @@ +de.lmu.ifi.dbs.elki.algorithm.clustering.kmeans.RandomlyGeneratedInitialMeans +de.lmu.ifi.dbs.elki.algorithm.clustering.kmeans.RandomlyChosenInitialMeans +de.lmu.ifi.dbs.elki.algorithm.clustering.kmeans.FirstKInitialMeans +de.lmu.ifi.dbs.elki.algorithm.clustering.kmeans.KMeansPlusPlusInitialMeans diff --git a/src/META-INF/elki/de.lmu.ifi.dbs.elki.algorithm.outlier.OutlierAlgorithm b/src/META-INF/elki/de.lmu.ifi.dbs.elki.algorithm.outlier.OutlierAlgorithm new file mode 100644 index 00000000..14bb81fa --- /dev/null +++ b/src/META-INF/elki/de.lmu.ifi.dbs.elki.algorithm.outlier.OutlierAlgorithm @@ -0,0 +1,38 @@ +de.lmu.ifi.dbs.elki.algorithm.outlier.ABOD +de.lmu.ifi.dbs.elki.algorithm.outlier.AggarwalYuEvolutionary +de.lmu.ifi.dbs.elki.algorithm.outlier.AggarwalYuNaive +de.lmu.ifi.dbs.elki.algorithm.outlier.DBOutlierDetection +de.lmu.ifi.dbs.elki.algorithm.outlier.DBOutlierScore +de.lmu.ifi.dbs.elki.algorithm.outlier.EMOutlier +de.lmu.ifi.dbs.elki.algorithm.outlier.GaussianModel +de.lmu.ifi.dbs.elki.algorithm.outlier.GaussianUniformMixture +de.lmu.ifi.dbs.elki.algorithm.outlier.INFLO +de.lmu.ifi.dbs.elki.algorithm.outlier.KNNOutlier +de.lmu.ifi.dbs.elki.algorithm.outlier.KNNWeightOutlier +de.lmu.ifi.dbs.elki.algorithm.outlier.LDOF +de.lmu.ifi.dbs.elki.algorithm.outlier.LOCI +de.lmu.ifi.dbs.elki.algorithm.outlier.LOF +de.lmu.ifi.dbs.elki.algorithm.outlier.LoOP +de.lmu.ifi.dbs.elki.algorithm.outlier.OPTICSOF +de.lmu.ifi.dbs.elki.algorithm.outlier.OUTRES +de.lmu.ifi.dbs.elki.algorithm.outlier.ReferenceBasedOutlierDetection +de.lmu.ifi.dbs.elki.algorithm.outlier.SOD +de.lmu.ifi.dbs.elki.algorithm.outlier.OnlineLOF +de.lmu.ifi.dbs.elki.algorithm.outlier.spatial.CTLuGLSBackwardSearchAlgorithm +de.lmu.ifi.dbs.elki.algorithm.outlier.spatial.CTLuMeanMultipleAttributes +de.lmu.ifi.dbs.elki.algorithm.outlier.spatial.CTLuMedianAlgorithm +de.lmu.ifi.dbs.elki.algorithm.outlier.spatial.CTLuMedianMultipleAttributes +de.lmu.ifi.dbs.elki.algorithm.outlier.spatial.CTLuMoranScatterplotOutlier +de.lmu.ifi.dbs.elki.algorithm.outlier.spatial.CTLuRandomWalkEC +de.lmu.ifi.dbs.elki.algorithm.outlier.spatial.CTLuScatterplotOutlier +de.lmu.ifi.dbs.elki.algorithm.outlier.spatial.CTLuZTestOutlier +de.lmu.ifi.dbs.elki.algorithm.outlier.spatial.SLOM +de.lmu.ifi.dbs.elki.algorithm.outlier.spatial.SOF +de.lmu.ifi.dbs.elki.algorithm.outlier.spatial.TrimmedMeanApproach +de.lmu.ifi.dbs.elki.algorithm.outlier.meta.ExternalDoubleOutlierScore +de.lmu.ifi.dbs.elki.algorithm.outlier.meta.FeatureBagging +de.lmu.ifi.dbs.elki.algorithm.outlier.meta.RescaleMetaOutlierAlgorithm +de.lmu.ifi.dbs.elki.algorithm.outlier.trivial.ByLabelOutlier +de.lmu.ifi.dbs.elki.algorithm.outlier.trivial.TrivialAllOutlier +de.lmu.ifi.dbs.elki.algorithm.outlier.trivial.TrivialNoOutlier +de.lmu.ifi.dbs.elki.algorithm.outlier.trivial.TrivialGeneratedOutlier diff --git a/src/META-INF/elki/de.lmu.ifi.dbs.elki.algorithm.outlier.spatial.neighborhood.NeighborSetPredicate$Factory b/src/META-INF/elki/de.lmu.ifi.dbs.elki.algorithm.outlier.spatial.neighborhood.NeighborSetPredicate$Factory new file mode 100644 index 00000000..a68f645b --- /dev/null +++ b/src/META-INF/elki/de.lmu.ifi.dbs.elki.algorithm.outlier.spatial.neighborhood.NeighborSetPredicate$Factory @@ -0,0 +1,3 @@ +de.lmu.ifi.dbs.elki.algorithm.outlier.spatial.neighborhood.ExtendedNeighborhood$Factory +de.lmu.ifi.dbs.elki.algorithm.outlier.spatial.neighborhood.ExternalNeighborhood$Factory +de.lmu.ifi.dbs.elki.algorithm.outlier.spatial.neighborhood.PrecomputedKNearestNeighborNeighborhood$Factory diff --git a/src/META-INF/elki/de.lmu.ifi.dbs.elki.data.ClassLabel$Factory b/src/META-INF/elki/de.lmu.ifi.dbs.elki.data.ClassLabel$Factory new file mode 100644 index 00000000..4282b1f1 --- /dev/null +++ b/src/META-INF/elki/de.lmu.ifi.dbs.elki.data.ClassLabel$Factory @@ -0,0 +1,2 @@ +de.lmu.ifi.dbs.elki.data.SimpleClassLabel$Factory +de.lmu.ifi.dbs.elki.data.HierarchicalClassLabel$Factory diff --git a/src/META-INF/elki/de.lmu.ifi.dbs.elki.data.NumberVector b/src/META-INF/elki/de.lmu.ifi.dbs.elki.data.NumberVector new file mode 100644 index 00000000..9ee14dab --- /dev/null +++ b/src/META-INF/elki/de.lmu.ifi.dbs.elki.data.NumberVector @@ -0,0 +1,10 @@ +de.lmu.ifi.dbs.elki.data.DoubleVector +de.lmu.ifi.dbs.elki.data.BitVector +de.lmu.ifi.dbs.elki.data.FloatVector +de.lmu.ifi.dbs.elki.data.IntegerVector +de.lmu.ifi.dbs.elki.data.OneDimensionalDoubleVector +de.lmu.ifi.dbs.elki.data.ParameterizationFunction +de.lmu.ifi.dbs.elki.data.SparseFloatVector +# de.lmu.ifi.dbs.elki.math.linearalgebra.Vector +# de.lmu.ifi.dbs.elki.math.linearalgebra.Centroid +# de.lmu.ifi.dbs.elki.math.linearalgebra.ProjectedCentroid
\ No newline at end of file diff --git a/src/META-INF/elki/de.lmu.ifi.dbs.elki.data.images.ComputeColorHistogram b/src/META-INF/elki/de.lmu.ifi.dbs.elki.data.images.ComputeColorHistogram new file mode 100644 index 00000000..94c65a07 --- /dev/null +++ b/src/META-INF/elki/de.lmu.ifi.dbs.elki.data.images.ComputeColorHistogram @@ -0,0 +1,3 @@ +de.lmu.ifi.dbs.elki.data.images.ComputeHSBColorHistogram +de.lmu.ifi.dbs.elki.data.images.ComputeNaiveHSBColorHistogram +de.lmu.ifi.dbs.elki.data.images.ComputeNaiveRGBColorHistogram diff --git a/src/META-INF/elki/de.lmu.ifi.dbs.elki.database.Database b/src/META-INF/elki/de.lmu.ifi.dbs.elki.database.Database new file mode 100644 index 00000000..acb11415 --- /dev/null +++ b/src/META-INF/elki/de.lmu.ifi.dbs.elki.database.Database @@ -0,0 +1,3 @@ +de.lmu.ifi.dbs.elki.database.StaticArrayDatabase +de.lmu.ifi.dbs.elki.database.HashmapDatabase +# de.lmu.ifi.dbs.elki.database.ProxyDatabase diff --git a/src/META-INF/elki/de.lmu.ifi.dbs.elki.database.UpdatableDatabase b/src/META-INF/elki/de.lmu.ifi.dbs.elki.database.UpdatableDatabase new file mode 100644 index 00000000..486453f7 --- /dev/null +++ b/src/META-INF/elki/de.lmu.ifi.dbs.elki.database.UpdatableDatabase @@ -0,0 +1 @@ +de.lmu.ifi.dbs.elki.database.HashmapDatabase diff --git a/src/META-INF/elki/de.lmu.ifi.dbs.elki.datasource.DatabaseConnection b/src/META-INF/elki/de.lmu.ifi.dbs.elki.datasource.DatabaseConnection new file mode 100644 index 00000000..942dc71f --- /dev/null +++ b/src/META-INF/elki/de.lmu.ifi.dbs.elki.datasource.DatabaseConnection @@ -0,0 +1,11 @@ +de.lmu.ifi.dbs.elki.datasource.FileBasedDatabaseConnection +de.lmu.ifi.dbs.elki.datasource.ExternalIDJoinDatabaseConnection +de.lmu.ifi.dbs.elki.datasource.LabelJoinDatabaseConnection +de.lmu.ifi.dbs.elki.datasource.GeneratorXMLDatabaseConnection +de.lmu.ifi.dbs.elki.datasource.RandomDoubleVectorDatabaseConnection +de.lmu.ifi.dbs.elki.datasource.ConcatenateFilesDatabaseConnection +de.lmu.ifi.dbs.elki.datasource.EmptyDatabaseConnection +de.lmu.ifi.dbs.elki.datasource.DBIDRangeDatabaseConnection +de.lmu.ifi.dbs.elki.datasource.PresortedBlindJoinDatabaseConnection +# de.lmu.ifi.dbs.elki.datasource.InputStreamDatabaseConnection +# de.lmu.ifi.dbs.elki.datasource.ArrayAdapterDatabaseConnection
\ No newline at end of file diff --git a/src/META-INF/elki/de.lmu.ifi.dbs.elki.datasource.filter.ObjectFilter b/src/META-INF/elki/de.lmu.ifi.dbs.elki.datasource.filter.ObjectFilter new file mode 100644 index 00000000..3c159ed2 --- /dev/null +++ b/src/META-INF/elki/de.lmu.ifi.dbs.elki.datasource.filter.ObjectFilter @@ -0,0 +1,21 @@ +de.lmu.ifi.dbs.elki.datasource.filter.ByLabelFilter +de.lmu.ifi.dbs.elki.datasource.filter.ClassLabelFilter +de.lmu.ifi.dbs.elki.datasource.filter.DoubleVectorProjectionFilter +de.lmu.ifi.dbs.elki.datasource.filter.DoubleVectorRandomProjectionFilter +de.lmu.ifi.dbs.elki.datasource.filter.ExternalIDFilter +de.lmu.ifi.dbs.elki.datasource.filter.FixedDBIDsFilter +de.lmu.ifi.dbs.elki.datasource.filter.NoOpFilter +de.lmu.ifi.dbs.elki.datasource.filter.NoMissingValuesFilter +de.lmu.ifi.dbs.elki.datasource.filter.ShuffleObjectsFilter +de.lmu.ifi.dbs.elki.datasource.filter.SortByLabelFilter +de.lmu.ifi.dbs.elki.datasource.filter.SparseFloatVectorProjectionFilter +de.lmu.ifi.dbs.elki.datasource.filter.SparseFloatVectorRandomProjectionFilter +de.lmu.ifi.dbs.elki.datasource.filter.SparseVectorFieldFilter +de.lmu.ifi.dbs.elki.datasource.filter.SplitNumberVectorFilter +de.lmu.ifi.dbs.elki.datasource.filter.normalization.AttributeWiseErfNormalization +de.lmu.ifi.dbs.elki.datasource.filter.normalization.AttributeWiseMinMaxNormalization +de.lmu.ifi.dbs.elki.datasource.filter.normalization.AttributeWiseVarianceNormalization +de.lmu.ifi.dbs.elki.datasource.filter.normalization.LengthNormalization +de.lmu.ifi.dbs.elki.datasource.filter.normalization.InverseDocumentFrequencyNormalization +de.lmu.ifi.dbs.elki.datasource.filter.normalization.RankTieNormalization +de.lmu.ifi.dbs.elki.datasource.filter.normalization.TFIDFNormalization diff --git a/src/META-INF/elki/de.lmu.ifi.dbs.elki.datasource.parser.Parser b/src/META-INF/elki/de.lmu.ifi.dbs.elki.datasource.parser.Parser new file mode 100644 index 00000000..4002f056 --- /dev/null +++ b/src/META-INF/elki/de.lmu.ifi.dbs.elki.datasource.parser.Parser @@ -0,0 +1,10 @@ +de.lmu.ifi.dbs.elki.datasource.parser.NumberVectorLabelParser +de.lmu.ifi.dbs.elki.datasource.parser.ArffParser +de.lmu.ifi.dbs.elki.datasource.parser.DoubleVectorLabelParser +de.lmu.ifi.dbs.elki.datasource.parser.FloatVectorLabelParser +de.lmu.ifi.dbs.elki.datasource.parser.SparseBitVectorLabelParser +de.lmu.ifi.dbs.elki.datasource.parser.SparseFloatVectorLabelParser +de.lmu.ifi.dbs.elki.datasource.parser.TermFrequencyParser +de.lmu.ifi.dbs.elki.datasource.parser.BitVectorLabelParser +de.lmu.ifi.dbs.elki.datasource.parser.ParameterizationFunctionLabelParser +de.lmu.ifi.dbs.elki.datasource.parser.SimplePolygonParser diff --git a/src/META-INF/elki/de.lmu.ifi.dbs.elki.distance.distancefunction.AbstractIndexBasedDistanceFunction b/src/META-INF/elki/de.lmu.ifi.dbs.elki.distance.distancefunction.AbstractIndexBasedDistanceFunction new file mode 100644 index 00000000..3c32949a --- /dev/null +++ b/src/META-INF/elki/de.lmu.ifi.dbs.elki.distance.distancefunction.AbstractIndexBasedDistanceFunction @@ -0,0 +1,7 @@ +de.lmu.ifi.dbs.elki.distance.distancefunction.LocallyWeightedDistanceFunction +de.lmu.ifi.dbs.elki.distance.distancefunction.SharedNearestNeighborJaccardDistanceFunction +de.lmu.ifi.dbs.elki.distance.distancefunction.correlation.ERiCDistanceFunction +de.lmu.ifi.dbs.elki.distance.distancefunction.correlation.PCABasedCorrelationDistanceFunction +de.lmu.ifi.dbs.elki.distance.distancefunction.subspace.LocalSubspaceDistanceFunction +de.lmu.ifi.dbs.elki.distance.distancefunction.subspace.DiSHDistanceFunction +de.lmu.ifi.dbs.elki.distance.distancefunction.subspace.HiSCDistanceFunction diff --git a/src/META-INF/elki/de.lmu.ifi.dbs.elki.distance.distancefunction.DistanceFunction b/src/META-INF/elki/de.lmu.ifi.dbs.elki.distance.distancefunction.DistanceFunction new file mode 100644 index 00000000..45c31e56 --- /dev/null +++ b/src/META-INF/elki/de.lmu.ifi.dbs.elki.distance.distancefunction.DistanceFunction @@ -0,0 +1,53 @@ +de.lmu.ifi.dbs.elki.distance.distancefunction.EuclideanDistanceFunction +de.lmu.ifi.dbs.elki.distance.distancefunction.ManhattanDistanceFunction +de.lmu.ifi.dbs.elki.distance.distancefunction.LPNormDistanceFunction +de.lmu.ifi.dbs.elki.distance.distancefunction.MaximumDistanceFunction +de.lmu.ifi.dbs.elki.distance.distancefunction.MinimumDistanceFunction +de.lmu.ifi.dbs.elki.distance.distancefunction.ArcCosineDistanceFunction +de.lmu.ifi.dbs.elki.distance.distancefunction.CosineDistanceFunction +de.lmu.ifi.dbs.elki.distance.distancefunction.RandomStableDistanceFunction +de.lmu.ifi.dbs.elki.distance.distancefunction.SquaredEuclideanDistanceFunction +de.lmu.ifi.dbs.elki.distance.distancefunction.CanberraDistanceFunction +de.lmu.ifi.dbs.elki.distance.distancefunction.JeffreyDivergenceDistanceFunction +de.lmu.ifi.dbs.elki.distance.distancefunction.SharedNearestNeighborJaccardDistanceFunction +de.lmu.ifi.dbs.elki.distance.distancefunction.LocallyWeightedDistanceFunction +# de.lmu.ifi.dbs.elki.distance.distancefunction.WeightedDistanceFunction +# de.lmu.ifi.dbs.elki.distance.distancefunction.MinKDistance +# de.lmu.ifi.dbs.elki.distance.distancefunction.ProxyDistanceFunction +# de.lmu.ifi.dbs.elki.distance.distancefunction.WeightedLPNormDistanceFunction +# de.lmu.ifi.dbs.elki.distance.distancefunction.WeightedSquaredEuclideanDistanceFunction +de.lmu.ifi.dbs.elki.distance.distancefunction.adapter.SimilarityAdapterArccos +de.lmu.ifi.dbs.elki.distance.distancefunction.adapter.SimilarityAdapterLn +de.lmu.ifi.dbs.elki.distance.distancefunction.adapter.SimilarityAdapterLinear +de.lmu.ifi.dbs.elki.distance.distancefunction.colorhistogram.HSBHistogramQuadraticDistanceFunction +de.lmu.ifi.dbs.elki.distance.distancefunction.colorhistogram.HistogramIntersectionDistanceFunction +de.lmu.ifi.dbs.elki.distance.distancefunction.colorhistogram.RGBHistogramQuadraticDistanceFunction +de.lmu.ifi.dbs.elki.distance.distancefunction.correlation.PearsonCorrelationDistanceFunction +de.lmu.ifi.dbs.elki.distance.distancefunction.correlation.SquaredPearsonCorrelationDistanceFunction +de.lmu.ifi.dbs.elki.distance.distancefunction.correlation.ERiCDistanceFunction +de.lmu.ifi.dbs.elki.distance.distancefunction.correlation.PCABasedCorrelationDistanceFunction +# de.lmu.ifi.dbs.elki.distance.distancefunction.correlation.WeightedPearsonCorrelationDistanceFunction +# de.lmu.ifi.dbs.elki.distance.distancefunction.correlation.WeightedSquaredPearsonCorrelationDistanceFunction +de.lmu.ifi.dbs.elki.distance.distancefunction.geo.DimensionSelectingLatLngDistanceFunction +de.lmu.ifi.dbs.elki.distance.distancefunction.geo.LatLngDistanceFunction +de.lmu.ifi.dbs.elki.distance.distancefunction.geo.LngLatDistanceFunction +de.lmu.ifi.dbs.elki.distance.distancefunction.external.DiskCacheBasedDoubleDistanceFunction +de.lmu.ifi.dbs.elki.distance.distancefunction.external.DiskCacheBasedFloatDistanceFunction +de.lmu.ifi.dbs.elki.distance.distancefunction.external.FileBasedDoubleDistanceFunction +de.lmu.ifi.dbs.elki.distance.distancefunction.external.FileBasedFloatDistanceFunction +de.lmu.ifi.dbs.elki.distance.distancefunction.subspace.DimensionSelectingDistanceFunction +de.lmu.ifi.dbs.elki.distance.distancefunction.subspace.SubspaceEuclideanDistanceFunction +de.lmu.ifi.dbs.elki.distance.distancefunction.subspace.SubspaceLPNormDistanceFunction +de.lmu.ifi.dbs.elki.distance.distancefunction.subspace.SubspaceManhattanDistanceFunction +de.lmu.ifi.dbs.elki.distance.distancefunction.subspace.DiSHDistanceFunction +de.lmu.ifi.dbs.elki.distance.distancefunction.subspace.HiSCDistanceFunction +de.lmu.ifi.dbs.elki.distance.distancefunction.subspace.LocalSubspaceDistanceFunction +de.lmu.ifi.dbs.elki.distance.distancefunction.timeseries.DTWDistanceFunction +de.lmu.ifi.dbs.elki.distance.distancefunction.timeseries.EDRDistanceFunction +de.lmu.ifi.dbs.elki.distance.distancefunction.timeseries.ERPDistanceFunction +de.lmu.ifi.dbs.elki.distance.distancefunction.timeseries.LCSSDistanceFunction +# de.lmu.ifi.dbs.elki.distance.similarityfunction.kernel.FooKernelFunction +# de.lmu.ifi.dbs.elki.distance.similarityfunction.kernel.LinearKernelFunction +# de.lmu.ifi.dbs.elki.distance.similarityfunction.kernel.PolynomialKernelFunction +# tutorial.distancefunction.MultiLPNorm +# tutorial.distancefunction.TutorialDistanceFunction diff --git a/src/META-INF/elki/de.lmu.ifi.dbs.elki.distance.distancefunction.DoubleNorm b/src/META-INF/elki/de.lmu.ifi.dbs.elki.distance.distancefunction.DoubleNorm new file mode 100644 index 00000000..bb3847a9 --- /dev/null +++ b/src/META-INF/elki/de.lmu.ifi.dbs.elki.distance.distancefunction.DoubleNorm @@ -0,0 +1,10 @@ +de.lmu.ifi.dbs.elki.distance.distancefunction.EuclideanDistanceFunction +de.lmu.ifi.dbs.elki.distance.distancefunction.ManhattanDistanceFunction +de.lmu.ifi.dbs.elki.distance.distancefunction.MaximumDistanceFunction +de.lmu.ifi.dbs.elki.distance.distancefunction.MinimumDistanceFunction +de.lmu.ifi.dbs.elki.distance.distancefunction.LPNormDistanceFunction +de.lmu.ifi.dbs.elki.distance.distancefunction.SquaredEuclideanDistanceFunction +de.lmu.ifi.dbs.elki.distance.distancefunction.WeightedLPNormDistanceFunction +de.lmu.ifi.dbs.elki.distance.distancefunction.subspace.SubspaceEuclideanDistanceFunction +de.lmu.ifi.dbs.elki.distance.distancefunction.subspace.SubspaceLPNormDistanceFunction +de.lmu.ifi.dbs.elki.distance.distancefunction.subspace.SubspaceManhattanDistanceFunction diff --git a/src/META-INF/elki/de.lmu.ifi.dbs.elki.distance.distancefunction.FilteredLocalPCABasedDistanceFunction b/src/META-INF/elki/de.lmu.ifi.dbs.elki.distance.distancefunction.FilteredLocalPCABasedDistanceFunction new file mode 100644 index 00000000..df161a0a --- /dev/null +++ b/src/META-INF/elki/de.lmu.ifi.dbs.elki.distance.distancefunction.FilteredLocalPCABasedDistanceFunction @@ -0,0 +1,4 @@ +de.lmu.ifi.dbs.elki.distance.distancefunction.LocallyWeightedDistanceFunction +de.lmu.ifi.dbs.elki.distance.distancefunction.correlation.ERiCDistanceFunction +de.lmu.ifi.dbs.elki.distance.distancefunction.correlation.PCABasedCorrelationDistanceFunction +de.lmu.ifi.dbs.elki.distance.distancefunction.subspace.LocalSubspaceDistanceFunction diff --git a/src/META-INF/elki/de.lmu.ifi.dbs.elki.distance.distancefunction.LocallyWeightedDistanceFunction b/src/META-INF/elki/de.lmu.ifi.dbs.elki.distance.distancefunction.LocallyWeightedDistanceFunction new file mode 100644 index 00000000..6b852263 --- /dev/null +++ b/src/META-INF/elki/de.lmu.ifi.dbs.elki.distance.distancefunction.LocallyWeightedDistanceFunction @@ -0,0 +1 @@ +de.lmu.ifi.dbs.elki.distance.distancefunction.LocallyWeightedDistanceFunction diff --git a/src/META-INF/elki/de.lmu.ifi.dbs.elki.distance.distancefunction.NumberVectorDistanceFunction b/src/META-INF/elki/de.lmu.ifi.dbs.elki.distance.distancefunction.NumberVectorDistanceFunction new file mode 100644 index 00000000..ab889ff6 --- /dev/null +++ b/src/META-INF/elki/de.lmu.ifi.dbs.elki.distance.distancefunction.NumberVectorDistanceFunction @@ -0,0 +1,29 @@ +de.lmu.ifi.dbs.elki.distance.distancefunction.EuclideanDistanceFunction +de.lmu.ifi.dbs.elki.distance.distancefunction.ManhattanDistanceFunction +de.lmu.ifi.dbs.elki.distance.distancefunction.LPNormDistanceFunction +de.lmu.ifi.dbs.elki.distance.distancefunction.MaximumDistanceFunction +de.lmu.ifi.dbs.elki.distance.distancefunction.MinimumDistanceFunction +de.lmu.ifi.dbs.elki.distance.distancefunction.ArcCosineDistanceFunction +de.lmu.ifi.dbs.elki.distance.distancefunction.CosineDistanceFunction +de.lmu.ifi.dbs.elki.distance.distancefunction.SquaredEuclideanDistanceFunction +de.lmu.ifi.dbs.elki.distance.distancefunction.CanberraDistanceFunction +de.lmu.ifi.dbs.elki.distance.distancefunction.JeffreyDivergenceDistanceFunction +# de.lmu.ifi.dbs.elki.distance.distancefunction.WeightedDistanceFunction +# de.lmu.ifi.dbs.elki.distance.distancefunction.WeightedLPNormDistanceFunction +# de.lmu.ifi.dbs.elki.distance.distancefunction.WeightedSquaredEuclideanDistanceFunction +de.lmu.ifi.dbs.elki.distance.distancefunction.colorhistogram.HSBHistogramQuadraticDistanceFunction +de.lmu.ifi.dbs.elki.distance.distancefunction.colorhistogram.HistogramIntersectionDistanceFunction +de.lmu.ifi.dbs.elki.distance.distancefunction.colorhistogram.RGBHistogramQuadraticDistanceFunction +de.lmu.ifi.dbs.elki.distance.distancefunction.correlation.PearsonCorrelationDistanceFunction +de.lmu.ifi.dbs.elki.distance.distancefunction.correlation.SquaredPearsonCorrelationDistanceFunction +# de.lmu.ifi.dbs.elki.distance.distancefunction.correlation.WeightedPearsonCorrelationDistanceFunction +# de.lmu.ifi.dbs.elki.distance.distancefunction.correlation.WeightedSquaredPearsonCorrelationDistanceFunction +de.lmu.ifi.dbs.elki.distance.distancefunction.geo.DimensionSelectingLatLngDistanceFunction +de.lmu.ifi.dbs.elki.distance.distancefunction.geo.LatLngDistanceFunction +de.lmu.ifi.dbs.elki.distance.distancefunction.geo.LngLatDistanceFunction +de.lmu.ifi.dbs.elki.distance.distancefunction.timeseries.DTWDistanceFunction +de.lmu.ifi.dbs.elki.distance.distancefunction.timeseries.EDRDistanceFunction +de.lmu.ifi.dbs.elki.distance.distancefunction.timeseries.ERPDistanceFunction +de.lmu.ifi.dbs.elki.distance.distancefunction.timeseries.LCSSDistanceFunction +# tutorial.distancefunction.MultiLPNorm +# tutorial.distancefunction.TutorialDistanceFunction
\ No newline at end of file diff --git a/src/META-INF/elki/de.lmu.ifi.dbs.elki.distance.distancefunction.PrimitiveDistanceFunction b/src/META-INF/elki/de.lmu.ifi.dbs.elki.distance.distancefunction.PrimitiveDistanceFunction new file mode 100644 index 00000000..bc770e74 --- /dev/null +++ b/src/META-INF/elki/de.lmu.ifi.dbs.elki.distance.distancefunction.PrimitiveDistanceFunction @@ -0,0 +1,36 @@ +de.lmu.ifi.dbs.elki.distance.distancefunction.EuclideanDistanceFunction +de.lmu.ifi.dbs.elki.distance.distancefunction.ManhattanDistanceFunction +de.lmu.ifi.dbs.elki.distance.distancefunction.LPNormDistanceFunction +de.lmu.ifi.dbs.elki.distance.distancefunction.ArcCosineDistanceFunction +de.lmu.ifi.dbs.elki.distance.distancefunction.CosineDistanceFunction +de.lmu.ifi.dbs.elki.distance.distancefunction.MaximumDistanceFunction +de.lmu.ifi.dbs.elki.distance.distancefunction.MinimumDistanceFunction +de.lmu.ifi.dbs.elki.distance.distancefunction.SquaredEuclideanDistanceFunction +de.lmu.ifi.dbs.elki.distance.distancefunction.CanberraDistanceFunction +de.lmu.ifi.dbs.elki.distance.distancefunction.JeffreyDivergenceDistanceFunction +# de.lmu.ifi.dbs.elki.distance.distancefunction.WeightedDistanceFunction +# de.lmu.ifi.dbs.elki.distance.distancefunction.WeightedLPNormDistanceFunction +# de.lmu.ifi.dbs.elki.distance.distancefunction.WeightedSquaredEuclideanDistanceFunction +de.lmu.ifi.dbs.elki.distance.distancefunction.colorhistogram.HSBHistogramQuadraticDistanceFunction +de.lmu.ifi.dbs.elki.distance.distancefunction.colorhistogram.HistogramIntersectionDistanceFunction +de.lmu.ifi.dbs.elki.distance.distancefunction.colorhistogram.RGBHistogramQuadraticDistanceFunction +de.lmu.ifi.dbs.elki.distance.distancefunction.correlation.PearsonCorrelationDistanceFunction +de.lmu.ifi.dbs.elki.distance.distancefunction.correlation.SquaredPearsonCorrelationDistanceFunction +# de.lmu.ifi.dbs.elki.distance.distancefunction.correlation.WeightedPearsonCorrelationDistanceFunction +# de.lmu.ifi.dbs.elki.distance.distancefunction.correlation.WeightedSquaredPearsonCorrelationDistanceFunction +de.lmu.ifi.dbs.elki.distance.distancefunction.geo.DimensionSelectingLatLngDistanceFunction +de.lmu.ifi.dbs.elki.distance.distancefunction.geo.LatLngDistanceFunction +de.lmu.ifi.dbs.elki.distance.distancefunction.geo.LngLatDistanceFunction +de.lmu.ifi.dbs.elki.distance.distancefunction.subspace.DimensionSelectingDistanceFunction +de.lmu.ifi.dbs.elki.distance.distancefunction.subspace.SubspaceEuclideanDistanceFunction +de.lmu.ifi.dbs.elki.distance.distancefunction.subspace.SubspaceLPNormDistanceFunction +de.lmu.ifi.dbs.elki.distance.distancefunction.subspace.SubspaceManhattanDistanceFunction +de.lmu.ifi.dbs.elki.distance.distancefunction.timeseries.DTWDistanceFunction +de.lmu.ifi.dbs.elki.distance.distancefunction.timeseries.EDRDistanceFunction +de.lmu.ifi.dbs.elki.distance.distancefunction.timeseries.ERPDistanceFunction +de.lmu.ifi.dbs.elki.distance.distancefunction.timeseries.LCSSDistanceFunction +# de.lmu.ifi.dbs.elki.distance.similarityfunction.kernel.FooKernelFunction +# de.lmu.ifi.dbs.elki.distance.similarityfunction.kernel.LinearKernelFunction +# de.lmu.ifi.dbs.elki.distance.similarityfunction.kernel.PolynomialKernelFunction +# tutorial.distancefunction.MultiLPNorm +# tutorial.distancefunction.TutorialDistanceFunction diff --git a/src/META-INF/elki/de.lmu.ifi.dbs.elki.distance.distancefunction.PrimitiveDoubleDistanceFunction b/src/META-INF/elki/de.lmu.ifi.dbs.elki.distance.distancefunction.PrimitiveDoubleDistanceFunction new file mode 100644 index 00000000..3bf5428e --- /dev/null +++ b/src/META-INF/elki/de.lmu.ifi.dbs.elki.distance.distancefunction.PrimitiveDoubleDistanceFunction @@ -0,0 +1,33 @@ +de.lmu.ifi.dbs.elki.distance.distancefunction.EuclideanDistanceFunction +de.lmu.ifi.dbs.elki.distance.distancefunction.ManhattanDistanceFunction +de.lmu.ifi.dbs.elki.distance.distancefunction.LPNormDistanceFunction +de.lmu.ifi.dbs.elki.distance.distancefunction.ArcCosineDistanceFunction +de.lmu.ifi.dbs.elki.distance.distancefunction.CosineDistanceFunction +de.lmu.ifi.dbs.elki.distance.distancefunction.MaximumDistanceFunction +de.lmu.ifi.dbs.elki.distance.distancefunction.MinimumDistanceFunction +de.lmu.ifi.dbs.elki.distance.distancefunction.SquaredEuclideanDistanceFunction +de.lmu.ifi.dbs.elki.distance.distancefunction.CanberraDistanceFunction +de.lmu.ifi.dbs.elki.distance.distancefunction.JeffreyDivergenceDistanceFunction +# de.lmu.ifi.dbs.elki.distance.distancefunction.WeightedDistanceFunction +# de.lmu.ifi.dbs.elki.distance.distancefunction.WeightedLPNormDistanceFunction +# de.lmu.ifi.dbs.elki.distance.distancefunction.WeightedSquaredEuclideanDistanceFunction +de.lmu.ifi.dbs.elki.distance.distancefunction.colorhistogram.HSBHistogramQuadraticDistanceFunction +de.lmu.ifi.dbs.elki.distance.distancefunction.colorhistogram.HistogramIntersectionDistanceFunction +de.lmu.ifi.dbs.elki.distance.distancefunction.colorhistogram.RGBHistogramQuadraticDistanceFunction +de.lmu.ifi.dbs.elki.distance.distancefunction.correlation.PearsonCorrelationDistanceFunction +de.lmu.ifi.dbs.elki.distance.distancefunction.correlation.SquaredPearsonCorrelationDistanceFunction +# de.lmu.ifi.dbs.elki.distance.distancefunction.correlation.WeightedPearsonCorrelationDistanceFunction +# de.lmu.ifi.dbs.elki.distance.distancefunction.correlation.WeightedSquaredPearsonCorrelationDistanceFunction +de.lmu.ifi.dbs.elki.distance.distancefunction.geo.DimensionSelectingLatLngDistanceFunction +de.lmu.ifi.dbs.elki.distance.distancefunction.geo.LatLngDistanceFunction +de.lmu.ifi.dbs.elki.distance.distancefunction.geo.LngLatDistanceFunction +de.lmu.ifi.dbs.elki.distance.distancefunction.subspace.DimensionSelectingDistanceFunction +de.lmu.ifi.dbs.elki.distance.distancefunction.subspace.SubspaceEuclideanDistanceFunction +de.lmu.ifi.dbs.elki.distance.distancefunction.subspace.SubspaceLPNormDistanceFunction +de.lmu.ifi.dbs.elki.distance.distancefunction.subspace.SubspaceManhattanDistanceFunction +de.lmu.ifi.dbs.elki.distance.distancefunction.timeseries.DTWDistanceFunction +de.lmu.ifi.dbs.elki.distance.distancefunction.timeseries.EDRDistanceFunction +de.lmu.ifi.dbs.elki.distance.distancefunction.timeseries.ERPDistanceFunction +de.lmu.ifi.dbs.elki.distance.distancefunction.timeseries.LCSSDistanceFunction +# tutorial.distancefunction.MultiLPNorm +# tutorial.distancefunction.TutorialDistanceFunction diff --git a/src/META-INF/elki/de.lmu.ifi.dbs.elki.distance.distancefunction.SpatialPrimitiveDistanceFunction b/src/META-INF/elki/de.lmu.ifi.dbs.elki.distance.distancefunction.SpatialPrimitiveDistanceFunction new file mode 100644 index 00000000..bc1c6777 --- /dev/null +++ b/src/META-INF/elki/de.lmu.ifi.dbs.elki.distance.distancefunction.SpatialPrimitiveDistanceFunction @@ -0,0 +1,15 @@ +de.lmu.ifi.dbs.elki.distance.distancefunction.EuclideanDistanceFunction +de.lmu.ifi.dbs.elki.distance.distancefunction.ManhattanDistanceFunction +de.lmu.ifi.dbs.elki.distance.distancefunction.LPNormDistanceFunction +de.lmu.ifi.dbs.elki.distance.distancefunction.MaximumDistanceFunction +de.lmu.ifi.dbs.elki.distance.distancefunction.MinimumDistanceFunction +de.lmu.ifi.dbs.elki.distance.distancefunction.ArcCosineDistanceFunction +de.lmu.ifi.dbs.elki.distance.distancefunction.CosineDistanceFunction +de.lmu.ifi.dbs.elki.distance.distancefunction.CanberraDistanceFunction +de.lmu.ifi.dbs.elki.distance.distancefunction.SquaredEuclideanDistanceFunction +de.lmu.ifi.dbs.elki.distance.distancefunction.WeightedLPNormDistanceFunction +de.lmu.ifi.dbs.elki.distance.distancefunction.colorhistogram.HistogramIntersectionDistanceFunction +de.lmu.ifi.dbs.elki.distance.distancefunction.subspace.DimensionSelectingDistanceFunction +de.lmu.ifi.dbs.elki.distance.distancefunction.subspace.SubspaceEuclideanDistanceFunction +de.lmu.ifi.dbs.elki.distance.distancefunction.subspace.SubspaceLPNormDistanceFunction +de.lmu.ifi.dbs.elki.distance.distancefunction.subspace.SubspaceManhattanDistanceFunction
\ No newline at end of file diff --git a/src/META-INF/elki/de.lmu.ifi.dbs.elki.distance.distancefunction.SpatialPrimitiveDoubleDistanceFunction b/src/META-INF/elki/de.lmu.ifi.dbs.elki.distance.distancefunction.SpatialPrimitiveDoubleDistanceFunction new file mode 100644 index 00000000..a5e3364e --- /dev/null +++ b/src/META-INF/elki/de.lmu.ifi.dbs.elki.distance.distancefunction.SpatialPrimitiveDoubleDistanceFunction @@ -0,0 +1,15 @@ +de.lmu.ifi.dbs.elki.distance.distancefunction.EuclideanDistanceFunction +de.lmu.ifi.dbs.elki.distance.distancefunction.ManhattanDistanceFunction +de.lmu.ifi.dbs.elki.distance.distancefunction.LPNormDistanceFunction +de.lmu.ifi.dbs.elki.distance.distancefunction.MaximumDistanceFunction +de.lmu.ifi.dbs.elki.distance.distancefunction.MinimumDistanceFunction +de.lmu.ifi.dbs.elki.distance.distancefunction.ArcCosineDistanceFunction +de.lmu.ifi.dbs.elki.distance.distancefunction.CosineDistanceFunction +de.lmu.ifi.dbs.elki.distance.distancefunction.CanberraDistanceFunction +de.lmu.ifi.dbs.elki.distance.distancefunction.WeightedLPNormDistanceFunction +de.lmu.ifi.dbs.elki.distance.distancefunction.SquaredEuclideanDistanceFunction +de.lmu.ifi.dbs.elki.distance.distancefunction.colorhistogram.HistogramIntersectionDistanceFunction +de.lmu.ifi.dbs.elki.distance.distancefunction.subspace.DimensionSelectingDistanceFunction +de.lmu.ifi.dbs.elki.distance.distancefunction.subspace.SubspaceEuclideanDistanceFunction +de.lmu.ifi.dbs.elki.distance.distancefunction.subspace.SubspaceLPNormDistanceFunction +de.lmu.ifi.dbs.elki.distance.distancefunction.subspace.SubspaceManhattanDistanceFunction diff --git a/src/META-INF/elki/de.lmu.ifi.dbs.elki.distance.distancefunction.external.DistanceParser b/src/META-INF/elki/de.lmu.ifi.dbs.elki.distance.distancefunction.external.DistanceParser new file mode 100644 index 00000000..199f56b9 --- /dev/null +++ b/src/META-INF/elki/de.lmu.ifi.dbs.elki.distance.distancefunction.external.DistanceParser @@ -0,0 +1 @@ +de.lmu.ifi.dbs.elki.distance.distancefunction.external.NumberDistanceParser
\ No newline at end of file diff --git a/src/META-INF/elki/de.lmu.ifi.dbs.elki.distance.distancefunction.subspace.AbstractDimensionsSelectingDoubleDistanceFunction b/src/META-INF/elki/de.lmu.ifi.dbs.elki.distance.distancefunction.subspace.AbstractDimensionsSelectingDoubleDistanceFunction new file mode 100644 index 00000000..f0a38487 --- /dev/null +++ b/src/META-INF/elki/de.lmu.ifi.dbs.elki.distance.distancefunction.subspace.AbstractDimensionsSelectingDoubleDistanceFunction @@ -0,0 +1,3 @@ +de.lmu.ifi.dbs.elki.distance.distancefunction.subspace.SubspaceEuclideanDistanceFunction +de.lmu.ifi.dbs.elki.distance.distancefunction.subspace.SubspaceLPNormDistanceFunction +de.lmu.ifi.dbs.elki.distance.distancefunction.subspace.SubspaceManhattanDistanceFunction diff --git a/src/META-INF/elki/de.lmu.ifi.dbs.elki.distance.similarityfunction.NormalizedSimilarityFunction b/src/META-INF/elki/de.lmu.ifi.dbs.elki.distance.similarityfunction.NormalizedSimilarityFunction new file mode 100644 index 00000000..6d8add0c --- /dev/null +++ b/src/META-INF/elki/de.lmu.ifi.dbs.elki.distance.similarityfunction.NormalizedSimilarityFunction @@ -0,0 +1 @@ +de.lmu.ifi.dbs.elki.distance.similarityfunction.FractionalSharedNearestNeighborSimilarityFunction diff --git a/src/META-INF/elki/de.lmu.ifi.dbs.elki.distance.similarityfunction.PrimitiveSimilarityFunction b/src/META-INF/elki/de.lmu.ifi.dbs.elki.distance.similarityfunction.PrimitiveSimilarityFunction new file mode 100644 index 00000000..33284aa0 --- /dev/null +++ b/src/META-INF/elki/de.lmu.ifi.dbs.elki.distance.similarityfunction.PrimitiveSimilarityFunction @@ -0,0 +1,4 @@ +de.lmu.ifi.dbs.elki.distance.similarityfunction.kernel.FooKernelFunction +de.lmu.ifi.dbs.elki.distance.similarityfunction.kernel.LinearKernelFunction +de.lmu.ifi.dbs.elki.distance.similarityfunction.kernel.PolynomialKernelFunction +de.lmu.ifi.dbs.elki.distance.similarityfunction.InvertedDistanceSimilarityFunction diff --git a/src/META-INF/elki/de.lmu.ifi.dbs.elki.distance.similarityfunction.SimilarityFunction b/src/META-INF/elki/de.lmu.ifi.dbs.elki.distance.similarityfunction.SimilarityFunction new file mode 100644 index 00000000..bc5ffaa6 --- /dev/null +++ b/src/META-INF/elki/de.lmu.ifi.dbs.elki.distance.similarityfunction.SimilarityFunction @@ -0,0 +1,6 @@ +de.lmu.ifi.dbs.elki.distance.similarityfunction.FractionalSharedNearestNeighborSimilarityFunction +de.lmu.ifi.dbs.elki.distance.similarityfunction.SharedNearestNeighborSimilarityFunction +de.lmu.ifi.dbs.elki.distance.similarityfunction.InvertedDistanceSimilarityFunction +# de.lmu.ifi.dbs.elki.distance.similarityfunction.kernel.FooKernelFunction +# de.lmu.ifi.dbs.elki.distance.similarityfunction.kernel.LinearKernelFunction +# de.lmu.ifi.dbs.elki.distance.similarityfunction.kernel.PolynomialKernelFunction diff --git a/src/META-INF/elki/de.lmu.ifi.dbs.elki.evaluation.Evaluator b/src/META-INF/elki/de.lmu.ifi.dbs.elki.evaluation.Evaluator new file mode 100644 index 00000000..f2813425 --- /dev/null +++ b/src/META-INF/elki/de.lmu.ifi.dbs.elki.evaluation.Evaluator @@ -0,0 +1,8 @@ +de.lmu.ifi.dbs.elki.evaluation.clustering.EvaluateClustering +de.lmu.ifi.dbs.elki.evaluation.clustering.pairsegments.ClusterPairSegmentAnalysis +de.lmu.ifi.dbs.elki.evaluation.roc.ComputeROCCurve +de.lmu.ifi.dbs.elki.evaluation.histogram.ComputeOutlierHistogram +de.lmu.ifi.dbs.elki.evaluation.index.IndexPurity +de.lmu.ifi.dbs.elki.evaluation.index.IndexStatistics +de.lmu.ifi.dbs.elki.evaluation.outlier.JudgeOutlierScores +de.lmu.ifi.dbs.elki.evaluation.similaritymatrix.ComputeSimilarityMatrixImage diff --git a/src/META-INF/elki/de.lmu.ifi.dbs.elki.index.IndexFactory b/src/META-INF/elki/de.lmu.ifi.dbs.elki.index.IndexFactory new file mode 100644 index 00000000..6c0fff30 --- /dev/null +++ b/src/META-INF/elki/de.lmu.ifi.dbs.elki.index.IndexFactory @@ -0,0 +1,24 @@ +de.lmu.ifi.dbs.elki.index.tree.spatial.rstarvariants.rstar.RStarTreeFactory +de.lmu.ifi.dbs.elki.index.tree.spatial.rstarvariants.deliclu.DeLiCluTreeFactory +de.lmu.ifi.dbs.elki.index.tree.spatial.rstarvariants.flat.FlatRStarTreeFactory +# de.lmu.ifi.dbs.elki.index.tree.spatial.rstarvariants.rdknn.RdKNNTreeFactory +de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mtree.MTreeFactory +de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mktrees.mkapp.MkAppTreeFactory +# de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mktrees.mkcop.MkCopTreeFactory +de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mktrees.mkmax.MkMaxTreeFactory +de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mktrees.mktab.MkTabTreeFactory +de.lmu.ifi.dbs.elki.index.vafile.VAFile$Factory +de.lmu.ifi.dbs.elki.index.preprocessed.knn.MaterializeKNNAndRKNNPreprocessor$Factory +de.lmu.ifi.dbs.elki.index.preprocessed.knn.MaterializeKNNPreprocessor$Factory +de.lmu.ifi.dbs.elki.index.preprocessed.knn.KNNJoinMaterializeKNNPreprocessor$Factory +de.lmu.ifi.dbs.elki.index.preprocessed.knn.MetricalIndexApproximationMaterializeKNNPreprocessor$Factory +de.lmu.ifi.dbs.elki.index.preprocessed.knn.PartitionApproximationMaterializeKNNPreprocessor$Factory +de.lmu.ifi.dbs.elki.index.preprocessed.knn.SpatialApproximationMaterializeKNNPreprocessor$Factory +de.lmu.ifi.dbs.elki.index.preprocessed.knn.RandomSampleKNNPreprocessor$Factory +de.lmu.ifi.dbs.elki.index.preprocessed.localpca.KNNQueryFilteredPCAIndex$Factory +de.lmu.ifi.dbs.elki.index.preprocessed.localpca.RangeQueryFilteredPCAIndex$Factory +de.lmu.ifi.dbs.elki.index.preprocessed.preference.DiSHPreferenceVectorIndex$Factory +de.lmu.ifi.dbs.elki.index.preprocessed.preference.HiSCPreferenceVectorIndex$Factory +de.lmu.ifi.dbs.elki.index.preprocessed.snn.SharedNearestNeighborPreprocessor$Factory +de.lmu.ifi.dbs.elki.index.preprocessed.subspaceproj.FourCSubspaceIndex$Factory +de.lmu.ifi.dbs.elki.index.preprocessed.subspaceproj.PreDeConSubspaceIndex$Factory
\ No newline at end of file diff --git a/src/META-INF/elki/de.lmu.ifi.dbs.elki.index.KNNIndex b/src/META-INF/elki/de.lmu.ifi.dbs.elki.index.KNNIndex new file mode 100644 index 00000000..cc1e2e56 --- /dev/null +++ b/src/META-INF/elki/de.lmu.ifi.dbs.elki.index.KNNIndex @@ -0,0 +1,17 @@ +de.lmu.ifi.dbs.elki.index.tree.spatial.rstarvariants.rstar.RStarTreeIndex +de.lmu.ifi.dbs.elki.index.tree.spatial.rstarvariants.deliclu.DeLiCluTreeIndex +de.lmu.ifi.dbs.elki.index.tree.spatial.rstarvariants.flat.FlatRStarTreeIndex +# de.lmu.ifi.dbs.elki.index.tree.spatial.rstarvariants.rdknn.RdKNNTree +de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mtree.MTreeIndex +de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mktrees.mkapp.MkAppTreeIndex +# de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mktrees.mkcop.MkCoPTreeIndex +de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mktrees.mkmax.MkMaxTreeIndex +de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mktrees.mktab.MkTabTreeIndex +de.lmu.ifi.dbs.elki.index.preprocessed.knn.MaterializeKNNAndRKNNPreprocessor +de.lmu.ifi.dbs.elki.index.preprocessed.knn.MaterializeKNNPreprocessor +de.lmu.ifi.dbs.elki.index.preprocessed.knn.KNNJoinMaterializeKNNPreprocessor +de.lmu.ifi.dbs.elki.index.preprocessed.knn.MetricalIndexApproximationMaterializeKNNPreprocessor +de.lmu.ifi.dbs.elki.index.preprocessed.knn.PartitionApproximationMaterializeKNNPreprocessor +de.lmu.ifi.dbs.elki.index.preprocessed.knn.RandomSampleKNNPreprocessor +de.lmu.ifi.dbs.elki.index.preprocessed.knn.SpatialApproximationMaterializeKNNPreprocessor +de.lmu.ifi.dbs.elki.index.vafile.VAFile
\ No newline at end of file diff --git a/src/META-INF/elki/de.lmu.ifi.dbs.elki.index.RKNNIndex b/src/META-INF/elki/de.lmu.ifi.dbs.elki.index.RKNNIndex new file mode 100644 index 00000000..04293f79 --- /dev/null +++ b/src/META-INF/elki/de.lmu.ifi.dbs.elki.index.RKNNIndex @@ -0,0 +1,6 @@ +de.lmu.ifi.dbs.elki.index.preprocessed.knn.MaterializeKNNAndRKNNPreprocessor +de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mktrees.mkapp.MkAppTreeIndex +# de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mktrees.mkcop.MkCoPTreeIndex +de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mktrees.mkmax.MkMaxTreeIndex +de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mktrees.mktab.MkTabTreeIndex +# de.lmu.ifi.dbs.elki.index.tree.spatial.rstarvariants.rdknn.RdKNNTree diff --git a/src/META-INF/elki/de.lmu.ifi.dbs.elki.index.RangeIndex b/src/META-INF/elki/de.lmu.ifi.dbs.elki.index.RangeIndex new file mode 100644 index 00000000..d39d1bbb --- /dev/null +++ b/src/META-INF/elki/de.lmu.ifi.dbs.elki.index.RangeIndex @@ -0,0 +1,10 @@ +de.lmu.ifi.dbs.elki.index.tree.spatial.rstarvariants.rstar.RStarTreeIndex +de.lmu.ifi.dbs.elki.index.tree.spatial.rstarvariants.deliclu.DeLiCluTreeIndex +de.lmu.ifi.dbs.elki.index.tree.spatial.rstarvariants.flat.FlatRStarTreeIndex +# de.lmu.ifi.dbs.elki.index.tree.spatial.rstarvariants.rdknn.RdKNNTree +de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mtree.MTreeIndex +de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mktrees.mkapp.MkAppTreeIndex +# de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mktrees.mkcop.MkCoPTreeIndex +de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mktrees.mkmax.MkMaxTreeIndex +de.lmu.ifi.dbs.elki.index.tree.metrical.mtreevariants.mktrees.mktab.MkTabTreeIndex +de.lmu.ifi.dbs.elki.index.vafile.VAFile
\ No newline at end of file diff --git a/src/META-INF/elki/de.lmu.ifi.dbs.elki.index.preprocessed.LocalProjectionIndex$Factory b/src/META-INF/elki/de.lmu.ifi.dbs.elki.index.preprocessed.LocalProjectionIndex$Factory new file mode 100644 index 00000000..296ec2ae --- /dev/null +++ b/src/META-INF/elki/de.lmu.ifi.dbs.elki.index.preprocessed.LocalProjectionIndex$Factory @@ -0,0 +1,4 @@ +de.lmu.ifi.dbs.elki.index.preprocessed.localpca.KNNQueryFilteredPCAIndex$Factory +de.lmu.ifi.dbs.elki.index.preprocessed.localpca.RangeQueryFilteredPCAIndex$Factory +de.lmu.ifi.dbs.elki.index.preprocessed.subspaceproj.FourCSubspaceIndex$Factory +de.lmu.ifi.dbs.elki.index.preprocessed.subspaceproj.PreDeConSubspaceIndex$Factory diff --git a/src/META-INF/elki/de.lmu.ifi.dbs.elki.index.preprocessed.knn.MaterializeKNNPreprocessor b/src/META-INF/elki/de.lmu.ifi.dbs.elki.index.preprocessed.knn.MaterializeKNNPreprocessor new file mode 100644 index 00000000..293dd23a --- /dev/null +++ b/src/META-INF/elki/de.lmu.ifi.dbs.elki.index.preprocessed.knn.MaterializeKNNPreprocessor @@ -0,0 +1,2 @@ +de.lmu.ifi.dbs.elki.index.preprocessed.knn.MaterializeKNNPreprocessor +de.lmu.ifi.dbs.elki.index.preprocessed.knn.MaterializeKNNAndRKNNPreprocessor diff --git a/src/META-INF/elki/de.lmu.ifi.dbs.elki.index.preprocessed.localpca.FilteredLocalPCAIndex$Factory b/src/META-INF/elki/de.lmu.ifi.dbs.elki.index.preprocessed.localpca.FilteredLocalPCAIndex$Factory new file mode 100644 index 00000000..6d19b635 --- /dev/null +++ b/src/META-INF/elki/de.lmu.ifi.dbs.elki.index.preprocessed.localpca.FilteredLocalPCAIndex$Factory @@ -0,0 +1,2 @@ +de.lmu.ifi.dbs.elki.index.preprocessed.localpca.KNNQueryFilteredPCAIndex$Factory +de.lmu.ifi.dbs.elki.index.preprocessed.localpca.RangeQueryFilteredPCAIndex$Factory diff --git a/src/META-INF/elki/de.lmu.ifi.dbs.elki.index.preprocessed.preference.PreferenceVectorIndex$Factory b/src/META-INF/elki/de.lmu.ifi.dbs.elki.index.preprocessed.preference.PreferenceVectorIndex$Factory new file mode 100644 index 00000000..bbf473e6 --- /dev/null +++ b/src/META-INF/elki/de.lmu.ifi.dbs.elki.index.preprocessed.preference.PreferenceVectorIndex$Factory @@ -0,0 +1,2 @@ +de.lmu.ifi.dbs.elki.index.preprocessed.preference.DiSHPreferenceVectorIndex$Factory +de.lmu.ifi.dbs.elki.index.preprocessed.preference.HiSCPreferenceVectorIndex$Factory diff --git a/src/META-INF/elki/de.lmu.ifi.dbs.elki.index.preprocessed.snn.SharedNearestNeighborIndex$Factory b/src/META-INF/elki/de.lmu.ifi.dbs.elki.index.preprocessed.snn.SharedNearestNeighborIndex$Factory new file mode 100644 index 00000000..809e8f7e --- /dev/null +++ b/src/META-INF/elki/de.lmu.ifi.dbs.elki.index.preprocessed.snn.SharedNearestNeighborIndex$Factory @@ -0,0 +1 @@ +de.lmu.ifi.dbs.elki.index.preprocessed.snn.SharedNearestNeighborPreprocessor$Factory diff --git a/src/META-INF/elki/de.lmu.ifi.dbs.elki.index.preprocessed.subspaceproj.SubspaceProjectionIndex$Factory b/src/META-INF/elki/de.lmu.ifi.dbs.elki.index.preprocessed.subspaceproj.SubspaceProjectionIndex$Factory new file mode 100644 index 00000000..577610dc --- /dev/null +++ b/src/META-INF/elki/de.lmu.ifi.dbs.elki.index.preprocessed.subspaceproj.SubspaceProjectionIndex$Factory @@ -0,0 +1,2 @@ +de.lmu.ifi.dbs.elki.index.preprocessed.subspaceproj.FourCSubspaceIndex$Factory +de.lmu.ifi.dbs.elki.index.preprocessed.subspaceproj.PreDeConSubspaceIndex$Factory diff --git a/src/META-INF/elki/de.lmu.ifi.dbs.elki.index.tree.spatial.rstarvariants.strategies.bulk.BulkSplit b/src/META-INF/elki/de.lmu.ifi.dbs.elki.index.tree.spatial.rstarvariants.strategies.bulk.BulkSplit new file mode 100644 index 00000000..c40d3887 --- /dev/null +++ b/src/META-INF/elki/de.lmu.ifi.dbs.elki.index.tree.spatial.rstarvariants.strategies.bulk.BulkSplit @@ -0,0 +1,5 @@ +de.lmu.ifi.dbs.elki.index.tree.spatial.rstarvariants.strategies.bulk.SortTileRecursiveBulkSplit +de.lmu.ifi.dbs.elki.index.tree.spatial.rstarvariants.strategies.bulk.SpatialSortBulkSplit +de.lmu.ifi.dbs.elki.index.tree.spatial.rstarvariants.strategies.bulk.MaxExtensionBulkSplit +de.lmu.ifi.dbs.elki.index.tree.spatial.rstarvariants.strategies.bulk.OneDimSortBulkSplit +de.lmu.ifi.dbs.elki.index.tree.spatial.rstarvariants.strategies.bulk.FileOrderBulkSplit diff --git a/src/META-INF/elki/de.lmu.ifi.dbs.elki.index.tree.spatial.rstarvariants.strategies.insert.InsertionStrategy b/src/META-INF/elki/de.lmu.ifi.dbs.elki.index.tree.spatial.rstarvariants.strategies.insert.InsertionStrategy new file mode 100644 index 00000000..3efef709 --- /dev/null +++ b/src/META-INF/elki/de.lmu.ifi.dbs.elki.index.tree.spatial.rstarvariants.strategies.insert.InsertionStrategy @@ -0,0 +1,5 @@ +de.lmu.ifi.dbs.elki.index.tree.spatial.rstarvariants.strategies.insert.ApproximativeLeastOverlapInsertionStrategy +de.lmu.ifi.dbs.elki.index.tree.spatial.rstarvariants.strategies.insert.CombinedInsertionStrategy +de.lmu.ifi.dbs.elki.index.tree.spatial.rstarvariants.strategies.insert.LeastEnlargementWithAreaInsertionStrategy +de.lmu.ifi.dbs.elki.index.tree.spatial.rstarvariants.strategies.insert.LeastEnlargementInsertionStrategy +de.lmu.ifi.dbs.elki.index.tree.spatial.rstarvariants.strategies.insert.LeastOverlapInsertionStrategy diff --git a/src/META-INF/elki/de.lmu.ifi.dbs.elki.index.tree.spatial.rstarvariants.strategies.overflow.OverflowTreatment b/src/META-INF/elki/de.lmu.ifi.dbs.elki.index.tree.spatial.rstarvariants.strategies.overflow.OverflowTreatment new file mode 100644 index 00000000..9e5698ad --- /dev/null +++ b/src/META-INF/elki/de.lmu.ifi.dbs.elki.index.tree.spatial.rstarvariants.strategies.overflow.OverflowTreatment @@ -0,0 +1,2 @@ +de.lmu.ifi.dbs.elki.index.tree.spatial.rstarvariants.strategies.overflow.LimitedReinsertOverflowTreatment +de.lmu.ifi.dbs.elki.index.tree.spatial.rstarvariants.strategies.overflow.SplitOnlyOverflowTreatment diff --git a/src/META-INF/elki/de.lmu.ifi.dbs.elki.index.tree.spatial.rstarvariants.strategies.split.SplitStrategy b/src/META-INF/elki/de.lmu.ifi.dbs.elki.index.tree.spatial.rstarvariants.strategies.split.SplitStrategy new file mode 100644 index 00000000..46523b64 --- /dev/null +++ b/src/META-INF/elki/de.lmu.ifi.dbs.elki.index.tree.spatial.rstarvariants.strategies.split.SplitStrategy @@ -0,0 +1,5 @@ +de.lmu.ifi.dbs.elki.index.tree.spatial.rstarvariants.strategies.split.TopologicalSplitter +de.lmu.ifi.dbs.elki.index.tree.spatial.rstarvariants.strategies.split.RTreeQuadraticSplit +de.lmu.ifi.dbs.elki.index.tree.spatial.rstarvariants.strategies.split.RTreeLinearSplit +de.lmu.ifi.dbs.elki.index.tree.spatial.rstarvariants.strategies.split.AngTanLinearSplit +de.lmu.ifi.dbs.elki.index.tree.spatial.rstarvariants.strategies.split.GreeneSplit diff --git a/src/META-INF/elki/de.lmu.ifi.dbs.elki.math.linearalgebra.pca.CovarianceMatrixBuilder b/src/META-INF/elki/de.lmu.ifi.dbs.elki.math.linearalgebra.pca.CovarianceMatrixBuilder new file mode 100644 index 00000000..95801f2c --- /dev/null +++ b/src/META-INF/elki/de.lmu.ifi.dbs.elki.math.linearalgebra.pca.CovarianceMatrixBuilder @@ -0,0 +1,2 @@ +de.lmu.ifi.dbs.elki.math.linearalgebra.pca.StandardCovarianceMatrixBuilder +de.lmu.ifi.dbs.elki.math.linearalgebra.pca.WeightedCovarianceMatrixBuilder diff --git a/src/META-INF/elki/de.lmu.ifi.dbs.elki.math.linearalgebra.pca.EigenPairFilter b/src/META-INF/elki/de.lmu.ifi.dbs.elki.math.linearalgebra.pca.EigenPairFilter new file mode 100644 index 00000000..67050b39 --- /dev/null +++ b/src/META-INF/elki/de.lmu.ifi.dbs.elki.math.linearalgebra.pca.EigenPairFilter @@ -0,0 +1,9 @@ +de.lmu.ifi.dbs.elki.math.linearalgebra.pca.FirstNEigenPairFilter +# de.lmu.ifi.dbs.elki.math.linearalgebra.pca.NormalizingEigenPairFilter +de.lmu.ifi.dbs.elki.math.linearalgebra.pca.LimitEigenPairFilter +de.lmu.ifi.dbs.elki.math.linearalgebra.pca.PercentageEigenPairFilter +de.lmu.ifi.dbs.elki.math.linearalgebra.pca.ProgressiveEigenPairFilter +de.lmu.ifi.dbs.elki.math.linearalgebra.pca.WeakEigenPairFilter +de.lmu.ifi.dbs.elki.math.linearalgebra.pca.RelativeEigenPairFilter +de.lmu.ifi.dbs.elki.math.linearalgebra.pca.SignificantEigenPairFilter +de.lmu.ifi.dbs.elki.math.linearalgebra.pca.CompositeEigenPairFilter diff --git a/src/META-INF/elki/de.lmu.ifi.dbs.elki.math.linearalgebra.pca.PCAFilteredRunner b/src/META-INF/elki/de.lmu.ifi.dbs.elki.math.linearalgebra.pca.PCAFilteredRunner new file mode 100644 index 00000000..7ae46e6e --- /dev/null +++ b/src/META-INF/elki/de.lmu.ifi.dbs.elki.math.linearalgebra.pca.PCAFilteredRunner @@ -0,0 +1,2 @@ +de.lmu.ifi.dbs.elki.math.linearalgebra.pca.PCAFilteredRunner +de.lmu.ifi.dbs.elki.math.linearalgebra.pca.PCAFilteredAutotuningRunner
\ No newline at end of file diff --git a/src/META-INF/elki/de.lmu.ifi.dbs.elki.math.linearalgebra.pca.weightfunctions.WeightFunction b/src/META-INF/elki/de.lmu.ifi.dbs.elki.math.linearalgebra.pca.weightfunctions.WeightFunction new file mode 100644 index 00000000..683e3bb7 --- /dev/null +++ b/src/META-INF/elki/de.lmu.ifi.dbs.elki.math.linearalgebra.pca.weightfunctions.WeightFunction @@ -0,0 +1,13 @@ +de.lmu.ifi.dbs.elki.math.linearalgebra.pca.weightfunctions.ConstantWeight +de.lmu.ifi.dbs.elki.math.linearalgebra.pca.weightfunctions.ErfcStddevWeight +de.lmu.ifi.dbs.elki.math.linearalgebra.pca.weightfunctions.ErfcWeight +de.lmu.ifi.dbs.elki.math.linearalgebra.pca.weightfunctions.ExponentialStddevWeight +de.lmu.ifi.dbs.elki.math.linearalgebra.pca.weightfunctions.ExponentialWeight +de.lmu.ifi.dbs.elki.math.linearalgebra.pca.weightfunctions.GaussStddevWeight +de.lmu.ifi.dbs.elki.math.linearalgebra.pca.weightfunctions.GaussWeight +de.lmu.ifi.dbs.elki.math.linearalgebra.pca.weightfunctions.InverseLinearWeight +de.lmu.ifi.dbs.elki.math.linearalgebra.pca.weightfunctions.InverseProportionalStddevWeight +de.lmu.ifi.dbs.elki.math.linearalgebra.pca.weightfunctions.InverseProportionalWeight +de.lmu.ifi.dbs.elki.math.linearalgebra.pca.weightfunctions.LinearWeight +de.lmu.ifi.dbs.elki.math.linearalgebra.pca.weightfunctions.QuadraticStddevWeight +de.lmu.ifi.dbs.elki.math.linearalgebra.pca.weightfunctions.QuadraticWeight diff --git a/src/META-INF/elki/de.lmu.ifi.dbs.elki.math.spacefillingcurves.SpatialSorter b/src/META-INF/elki/de.lmu.ifi.dbs.elki.math.spacefillingcurves.SpatialSorter new file mode 100644 index 00000000..55923a7e --- /dev/null +++ b/src/META-INF/elki/de.lmu.ifi.dbs.elki.math.spacefillingcurves.SpatialSorter @@ -0,0 +1,4 @@ +de.lmu.ifi.dbs.elki.math.spacefillingcurves.PeanoSpatialSorter +de.lmu.ifi.dbs.elki.math.spacefillingcurves.ZCurveSpatialSorter +de.lmu.ifi.dbs.elki.math.spacefillingcurves.HilbertSpatialSorter +de.lmu.ifi.dbs.elki.math.spacefillingcurves.BinarySplitSpatialSorter
\ No newline at end of file diff --git a/src/META-INF/elki/de.lmu.ifi.dbs.elki.result.ResultHandler b/src/META-INF/elki/de.lmu.ifi.dbs.elki.result.ResultHandler new file mode 100644 index 00000000..66d8fef1 --- /dev/null +++ b/src/META-INF/elki/de.lmu.ifi.dbs.elki.result.ResultHandler @@ -0,0 +1,6 @@ +de.lmu.ifi.dbs.elki.result.ResultWriter +de.lmu.ifi.dbs.elki.visualization.gui.ResultVisualizer +de.lmu.ifi.dbs.elki.result.DiscardResultHandler +de.lmu.ifi.dbs.elki.result.KMLOutputHandler +de.lmu.ifi.dbs.elki.visualization.ExportVisualizations +de.lmu.ifi.dbs.elki.application.jsmap.JSONResultHandler diff --git a/src/META-INF/elki/de.lmu.ifi.dbs.elki.utilities.referencepoints.ReferencePointsHeuristic b/src/META-INF/elki/de.lmu.ifi.dbs.elki.utilities.referencepoints.ReferencePointsHeuristic new file mode 100644 index 00000000..1c20e4fb --- /dev/null +++ b/src/META-INF/elki/de.lmu.ifi.dbs.elki.utilities.referencepoints.ReferencePointsHeuristic @@ -0,0 +1,6 @@ +de.lmu.ifi.dbs.elki.utilities.referencepoints.GridBasedReferencePoints +de.lmu.ifi.dbs.elki.utilities.referencepoints.AxisBasedReferencePoints +de.lmu.ifi.dbs.elki.utilities.referencepoints.FullDatabaseReferencePoints +de.lmu.ifi.dbs.elki.utilities.referencepoints.RandomGeneratedReferencePoints +de.lmu.ifi.dbs.elki.utilities.referencepoints.RandomSampleReferencePoints +de.lmu.ifi.dbs.elki.utilities.referencepoints.StarBasedReferencePoints diff --git a/src/META-INF/elki/de.lmu.ifi.dbs.elki.utilities.scaling.ScalingFunction b/src/META-INF/elki/de.lmu.ifi.dbs.elki.utilities.scaling.ScalingFunction new file mode 100644 index 00000000..ccd91844 --- /dev/null +++ b/src/META-INF/elki/de.lmu.ifi.dbs.elki.utilities.scaling.ScalingFunction @@ -0,0 +1,19 @@ +de.lmu.ifi.dbs.elki.utilities.scaling.IdentityScaling +de.lmu.ifi.dbs.elki.utilities.scaling.ClipScaling +de.lmu.ifi.dbs.elki.utilities.scaling.GammaScaling +de.lmu.ifi.dbs.elki.utilities.scaling.LinearScaling +de.lmu.ifi.dbs.elki.utilities.scaling.MinusLogScaling +de.lmu.ifi.dbs.elki.utilities.scaling.outlier.OutlierLinearScaling +de.lmu.ifi.dbs.elki.utilities.scaling.outlier.TopKOutlierScaling +de.lmu.ifi.dbs.elki.utilities.scaling.outlier.MinusLogGammaScaling +de.lmu.ifi.dbs.elki.utilities.scaling.outlier.MinusLogStandardDeviationScaling +de.lmu.ifi.dbs.elki.utilities.scaling.outlier.MultiplicativeInverseScaling +de.lmu.ifi.dbs.elki.utilities.scaling.outlier.OutlierGammaScaling +de.lmu.ifi.dbs.elki.utilities.scaling.outlier.OutlierMinusLogScaling +de.lmu.ifi.dbs.elki.utilities.scaling.outlier.OutlierSqrtScaling +de.lmu.ifi.dbs.elki.utilities.scaling.outlier.SqrtStandardDeviationScaling +de.lmu.ifi.dbs.elki.utilities.scaling.outlier.StandardDeviationScaling +de.lmu.ifi.dbs.elki.utilities.scaling.outlier.HeDESNormalizationOutlierScaling +de.lmu.ifi.dbs.elki.utilities.scaling.outlier.MixtureModelOutlierScalingFunction +de.lmu.ifi.dbs.elki.utilities.scaling.outlier.RankingPseudoOutlierScaling +de.lmu.ifi.dbs.elki.utilities.scaling.outlier.SigmoidOutlierScalingFunction diff --git a/src/META-INF/elki/de.lmu.ifi.dbs.elki.utilities.scaling.StaticScalingFunction b/src/META-INF/elki/de.lmu.ifi.dbs.elki.utilities.scaling.StaticScalingFunction new file mode 100644 index 00000000..13f418e7 --- /dev/null +++ b/src/META-INF/elki/de.lmu.ifi.dbs.elki.utilities.scaling.StaticScalingFunction @@ -0,0 +1,5 @@ +de.lmu.ifi.dbs.elki.utilities.scaling.IdentityScaling +de.lmu.ifi.dbs.elki.utilities.scaling.ClipScaling +de.lmu.ifi.dbs.elki.utilities.scaling.GammaScaling +de.lmu.ifi.dbs.elki.utilities.scaling.LinearScaling +de.lmu.ifi.dbs.elki.utilities.scaling.MinusLogScaling diff --git a/src/META-INF/elki/de.lmu.ifi.dbs.elki.utilities.scaling.outlier.OutlierScalingFunction b/src/META-INF/elki/de.lmu.ifi.dbs.elki.utilities.scaling.outlier.OutlierScalingFunction new file mode 100644 index 00000000..49617959 --- /dev/null +++ b/src/META-INF/elki/de.lmu.ifi.dbs.elki.utilities.scaling.outlier.OutlierScalingFunction @@ -0,0 +1,14 @@ +de.lmu.ifi.dbs.elki.utilities.scaling.outlier.OutlierLinearScaling +de.lmu.ifi.dbs.elki.utilities.scaling.outlier.RankingPseudoOutlierScaling +de.lmu.ifi.dbs.elki.utilities.scaling.outlier.TopKOutlierScaling +de.lmu.ifi.dbs.elki.utilities.scaling.outlier.MinusLogGammaScaling +de.lmu.ifi.dbs.elki.utilities.scaling.outlier.MinusLogStandardDeviationScaling +de.lmu.ifi.dbs.elki.utilities.scaling.outlier.MultiplicativeInverseScaling +de.lmu.ifi.dbs.elki.utilities.scaling.outlier.OutlierGammaScaling +de.lmu.ifi.dbs.elki.utilities.scaling.outlier.OutlierMinusLogScaling +de.lmu.ifi.dbs.elki.utilities.scaling.outlier.OutlierSqrtScaling +de.lmu.ifi.dbs.elki.utilities.scaling.outlier.SqrtStandardDeviationScaling +de.lmu.ifi.dbs.elki.utilities.scaling.outlier.StandardDeviationScaling +de.lmu.ifi.dbs.elki.utilities.scaling.outlier.HeDESNormalizationOutlierScaling +de.lmu.ifi.dbs.elki.utilities.scaling.outlier.MixtureModelOutlierScalingFunction +de.lmu.ifi.dbs.elki.utilities.scaling.outlier.SigmoidOutlierScalingFunction diff --git a/src/META-INF/elki/de.lmu.ifi.dbs.elki.visualization.projector.ProjectorFactory b/src/META-INF/elki/de.lmu.ifi.dbs.elki.visualization.projector.ProjectorFactory new file mode 100644 index 00000000..5fc4f399 --- /dev/null +++ b/src/META-INF/elki/de.lmu.ifi.dbs.elki.visualization.projector.ProjectorFactory @@ -0,0 +1,4 @@ +de.lmu.ifi.dbs.elki.visualization.projector.HistogramFactory +de.lmu.ifi.dbs.elki.visualization.projector.ScatterPlotFactory +de.lmu.ifi.dbs.elki.visualization.projector.ParallelPlotFactory +de.lmu.ifi.dbs.elki.visualization.projector.OPTICSProjectorFactory
\ No newline at end of file diff --git a/src/META-INF/elki/de.lmu.ifi.dbs.elki.visualization.visualizers.VisFactory b/src/META-INF/elki/de.lmu.ifi.dbs.elki.visualization.visualizers.VisFactory new file mode 100644 index 00000000..296024aa --- /dev/null +++ b/src/META-INF/elki/de.lmu.ifi.dbs.elki.visualization.visualizers.VisFactory @@ -0,0 +1,46 @@ +de.lmu.ifi.dbs.elki.visualization.visualizers.scatterplot.AxisVisualization$Factory +de.lmu.ifi.dbs.elki.visualization.visualizers.scatterplot.MarkerVisualization$Factory +de.lmu.ifi.dbs.elki.visualization.visualizers.scatterplot.PolygonVisualization$Factory +de.lmu.ifi.dbs.elki.visualization.visualizers.scatterplot.cluster.ClusterMeanVisualization$Factory +de.lmu.ifi.dbs.elki.visualization.visualizers.scatterplot.cluster.ClusterHullVisualization$Factory +de.lmu.ifi.dbs.elki.visualization.visualizers.scatterplot.cluster.EMClusterVisualization$Factory +de.lmu.ifi.dbs.elki.visualization.visualizers.scatterplot.cluster.VoronoiVisualization$Factory +de.lmu.ifi.dbs.elki.visualization.visualizers.scatterplot.cluster.ClusterOrderVisualization$Factory +de.lmu.ifi.dbs.elki.visualization.visualizers.scatterplot.index.TreeMBRVisualization$Factory +de.lmu.ifi.dbs.elki.visualization.visualizers.scatterplot.index.TreeSphereVisualization$Factory +de.lmu.ifi.dbs.elki.visualization.visualizers.scatterplot.outlier.BubbleVisualization$Factory +de.lmu.ifi.dbs.elki.visualization.visualizers.scatterplot.TooltipScoreVisualization$Factory +de.lmu.ifi.dbs.elki.visualization.visualizers.scatterplot.TooltipStringVisualization$Factory +de.lmu.ifi.dbs.elki.visualization.visualizers.scatterplot.ToolBox2DVisualization$Factory +de.lmu.ifi.dbs.elki.visualization.visualizers.scatterplot.ReferencePointsVisualization$Factory +de.lmu.ifi.dbs.elki.visualization.visualizers.scatterplot.density.DensityEstimationOverlay$Factory +de.lmu.ifi.dbs.elki.visualization.visualizers.scatterplot.selection.MoveObjectsToolVisualization$Factory +de.lmu.ifi.dbs.elki.visualization.visualizers.scatterplot.selection.SelectionDotVisualization$Factory +de.lmu.ifi.dbs.elki.visualization.visualizers.scatterplot.selection.SelectionConvexHullVisualization$Factory +de.lmu.ifi.dbs.elki.visualization.visualizers.scatterplot.selection.SelectionCubeVisualization$Factory +de.lmu.ifi.dbs.elki.visualization.visualizers.scatterplot.selection.SelectionToolCubeVisualization$Factory +de.lmu.ifi.dbs.elki.visualization.visualizers.scatterplot.selection.SelectionToolDotVisualization$Factory +de.lmu.ifi.dbs.elki.visualization.visualizers.histogram.ColoredHistogramVisualizer$Factory +de.lmu.ifi.dbs.elki.visualization.visualizers.parallel.LineVisualization$Factory +de.lmu.ifi.dbs.elki.visualization.visualizers.parallel.ParallelAxisVisualization$Factory +de.lmu.ifi.dbs.elki.visualization.visualizers.parallel.cluster.ClusterParallelMeanVisualization$Factory +de.lmu.ifi.dbs.elki.visualization.visualizers.parallel.cluster.ClusterOutlineVisualization$Factory +de.lmu.ifi.dbs.elki.visualization.visualizers.parallel.index.RTreeParallelVisualization$Factory +de.lmu.ifi.dbs.elki.visualization.visualizers.parallel.selection.SelectionAxisRangeVisualization$Factory +de.lmu.ifi.dbs.elki.visualization.visualizers.parallel.selection.SelectionLineVisualization$Factory +de.lmu.ifi.dbs.elki.visualization.visualizers.parallel.selection.SelectionToolAxisRangeVisualization$Factory +de.lmu.ifi.dbs.elki.visualization.visualizers.parallel.selection.SelectionToolLineVisualization$Factory +de.lmu.ifi.dbs.elki.visualization.visualizers.pairsegments.CircleSegmentsVisualizer$Factory +de.lmu.ifi.dbs.elki.visualization.visualizers.visunproj.HistogramVisFactory +de.lmu.ifi.dbs.elki.visualization.visualizers.visunproj.ClusterEvaluationVisFactory +de.lmu.ifi.dbs.elki.visualization.visualizers.visunproj.CurveVisFactory +de.lmu.ifi.dbs.elki.visualization.visualizers.visunproj.LabelVisFactory +de.lmu.ifi.dbs.elki.visualization.visualizers.visunproj.PixmapVisualizer$Factory +de.lmu.ifi.dbs.elki.visualization.visualizers.visunproj.SimilarityMatrixVisualizer$Factory +de.lmu.ifi.dbs.elki.visualization.visualizers.visunproj.KeyVisualization$Factory +de.lmu.ifi.dbs.elki.visualization.visualizers.visunproj.SettingsVisFactory +de.lmu.ifi.dbs.elki.visualization.visualizers.optics.OPTICSClusterVisualization$Factory +de.lmu.ifi.dbs.elki.visualization.visualizers.optics.OPTICSPlotCutVisualization$Factory +de.lmu.ifi.dbs.elki.visualization.visualizers.optics.OPTICSPlotSelectionVisualization$Factory +de.lmu.ifi.dbs.elki.visualization.visualizers.optics.OPTICSPlotVisualizer$Factory +de.lmu.ifi.dbs.elki.visualization.visualizers.optics.OPTICSSteepAreaVisualization$Factory diff --git a/src/META-INF/services/org.apache.batik.ext.awt.image.spi.RegistryEntry b/src/META-INF/services/org.apache.batik.ext.awt.image.spi.RegistryEntry new file mode 100644 index 00000000..f1252025 --- /dev/null +++ b/src/META-INF/services/org.apache.batik.ext.awt.image.spi.RegistryEntry @@ -0,0 +1 @@ +de.lmu.ifi.dbs.elki.visualization.batikutil.ThumbnailRegistryEntry
\ No newline at end of file diff --git a/src/META-INF/services/org.apache.batik.util.ParsedURLProtocolHandler b/src/META-INF/services/org.apache.batik.util.ParsedURLProtocolHandler new file mode 100644 index 00000000..f1252025 --- /dev/null +++ b/src/META-INF/services/org.apache.batik.util.ParsedURLProtocolHandler @@ -0,0 +1 @@ +de.lmu.ifi.dbs.elki.visualization.batikutil.ThumbnailRegistryEntry
\ No newline at end of file |