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+package de.lmu.ifi.dbs.elki.index.preprocessed.knn;
+
+import de.lmu.ifi.dbs.elki.algorithm.KNNJoin;
+import de.lmu.ifi.dbs.elki.data.NumberVector;
+import de.lmu.ifi.dbs.elki.database.relation.Relation;
+import de.lmu.ifi.dbs.elki.distance.distancefunction.DistanceFunction;
+import de.lmu.ifi.dbs.elki.distance.distancevalue.Distance;
+import de.lmu.ifi.dbs.elki.index.tree.spatial.SpatialEntry;
+import de.lmu.ifi.dbs.elki.index.tree.spatial.rstarvariants.rstar.RStarTreeNode;
+import de.lmu.ifi.dbs.elki.logging.Logging;
+import de.lmu.ifi.dbs.elki.utilities.datastructures.heap.KNNList;
+
+/*
+ This file is part of ELKI:
+ Environment for Developing KDD-Applications Supported by Index-Structures
+
+ Copyright (C) 2012
+ Ludwig-Maximilians-Universität München
+ Lehr- und Forschungseinheit für Datenbanksysteme
+ ELKI Development Team
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Affero General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Affero General Public License for more details.
+
+ You should have received a copy of the GNU Affero General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
+
+/**
+ * Class to materialize the kNN using a spatial join on an R-tree.
+ *
+ * @author Erich Schubert
+ *
+ * @param <V> vector type
+ * @param <D> distance type
+ */
+public class KNNJoinMaterializeKNNPreprocessor<V extends NumberVector<V, ?>, D extends Distance<D>> extends AbstractMaterializeKNNPreprocessor<V, D, KNNList<D>> {
+ /**
+ * Logging class.
+ */
+ private static final Logging logger = Logging.getLogger(KNNJoinMaterializeKNNPreprocessor.class);
+
+ /**
+ * Constructor.
+ *
+ * @param relation Relation to index
+ * @param distanceFunction Distance function
+ * @param k k
+ */
+ public KNNJoinMaterializeKNNPreprocessor(Relation<V> relation, DistanceFunction<? super V, D> distanceFunction, int k) {
+ super(relation, distanceFunction, k);
+ }
+
+ @Override
+ protected void preprocess() {
+ // Run KNNJoin
+ KNNJoin<V, D, ?, ?> knnjoin = new KNNJoin<V, D, RStarTreeNode, SpatialEntry>(distanceFunction, k);
+ storage = knnjoin.run(relation.getDatabase(), relation);
+ }
+
+ @Override
+ protected Logging getLogger() {
+ return logger;
+ }
+
+ @Override
+ public String getLongName() {
+ return "knn-join materialized neighbors";
+ }
+
+ @Override
+ public String getShortName() {
+ return "knn-join";
+ }
+
+ /**
+ * The parameterizable factory.
+ *
+ * @author Erich Schubert
+ *
+ * @apiviz.landmark
+ * @apiviz.stereotype factory
+ * @apiviz.uses AbstractMaterializeKNNPreprocessor oneway - - «create»
+ *
+ * @param <O> The object type
+ * @param <D> The distance type
+ */
+ public static class Factory<O extends NumberVector<O, ?>, D extends Distance<D>> extends AbstractMaterializeKNNPreprocessor.Factory<O, D, KNNList<D>> {
+ /**
+ * Constructor.
+ *
+ * @param k K
+ * @param distanceFunction distance function
+ */
+ public Factory(int k, DistanceFunction<? super O, D> distanceFunction) {
+ super(k, distanceFunction);
+ }
+
+ @Override
+ public KNNJoinMaterializeKNNPreprocessor<O, D> instantiate(Relation<O> relation) {
+ return new KNNJoinMaterializeKNNPreprocessor<O, D>(relation, distanceFunction, k);
+ }
+
+ /**
+ * Parameterization class
+ *
+ * @author Erich Schubert
+ *
+ * @apiviz.exclude
+ *
+ * @param <O> Object type
+ * @param <D> Distance type
+ */
+ public static class Parameterizer<O extends NumberVector<O, ?>, D extends Distance<D>> extends AbstractMaterializeKNNPreprocessor.Factory.Parameterizer<O, D> {
+ @Override
+ protected KNNJoinMaterializeKNNPreprocessor.Factory<O, D> makeInstance() {
+ return new KNNJoinMaterializeKNNPreprocessor.Factory<O, D>(k, distanceFunction);
+ }
+ }
+ }
+} \ No newline at end of file