1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
|
package de.lmu.ifi.dbs.elki.distance.distancefunction.minkowski;
/*
This file is part of ELKI:
Environment for Developing KDD-Applications Supported by Index-Structures
Copyright (C) 2013
Ludwig-Maximilians-Universität München
Lehr- und Forschungseinheit für Datenbanksysteme
ELKI Development Team
This program is free software: you can redistribute it and/or modify
it under the terms of the GNU Affero General Public License as published by
the Free Software Foundation, either version 3 of the License, or
(at your option) any later version.
This program is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
GNU Affero General Public License for more details.
You should have received a copy of the GNU Affero General Public License
along with this program. If not, see <http://www.gnu.org/licenses/>.
*/
import de.lmu.ifi.dbs.elki.data.NumberVector;
import de.lmu.ifi.dbs.elki.data.spatial.SpatialComparable;
import de.lmu.ifi.dbs.elki.distance.distancefunction.AbstractSpatialDoubleDistanceNorm;
import de.lmu.ifi.dbs.elki.utilities.Alias;
import de.lmu.ifi.dbs.elki.utilities.optionhandling.AbstractParameterizer;
/**
* Provides the squared Euclidean distance for FeatureVectors. This results in
* the same rankings, but saves computing the square root as often.
*
* @author Arthur Zimek
*/
@Alias({ "squaredeuclidean", "de.lmu.ifi.dbs.elki.distance.distancefunction.SquaredEuclideanDistanceFunction" })
public class SquaredEuclideanDistanceFunction extends AbstractSpatialDoubleDistanceNorm {
/**
* Static instance. Use this!
*/
public static final SquaredEuclideanDistanceFunction STATIC = new SquaredEuclideanDistanceFunction();
/**
* Provides a Euclidean distance function that can compute the Euclidean
* distance (that is a DoubleDistance) for FeatureVectors.
*
* @deprecated Use static instance!
*/
@Deprecated
public SquaredEuclideanDistanceFunction() {
super();
}
@Override
public double doubleDistance(NumberVector<?> v1, NumberVector<?> v2) {
final int dim = dimensionality(v1, v2);
double agg = 0.;
for (int d = 0; d < dim; d++) {
final double delta = v1.doubleValue(d) - v2.doubleValue(d);
agg += delta * delta;
}
return agg;
}
@Override
public double doubleNorm(NumberVector<?> v) {
final int dim = v.getDimensionality();
double agg = 0.;
for (int d = 0; d < dim; d++) {
final double val = v.doubleValue(d);
agg += val * val;
}
return agg;
}
protected double doubleMinDistObject(NumberVector<?> v, SpatialComparable mbr) {
final int dim = dimensionality(mbr, v);
double agg = 0.;
for (int d = 0; d < dim; d++) {
final double value = v.doubleValue(d), min = mbr.getMin(d);
final double diff;
if (value < min) {
diff = min - value;
} else {
final double max = mbr.getMax(d);
if (value > max) {
diff = value - max;
} else {
continue;
}
}
agg += diff * diff;
}
return agg;
}
@Override
public double doubleMinDist(SpatialComparable mbr1, SpatialComparable mbr2) {
// Some optimizations for simpler cases.
if (mbr1 instanceof NumberVector) {
if (mbr2 instanceof NumberVector) {
return doubleDistance((NumberVector<?>) mbr1, (NumberVector<?>) mbr2);
} else {
return doubleMinDistObject((NumberVector<?>) mbr1, mbr2);
}
} else if (mbr2 instanceof NumberVector) {
return doubleMinDistObject((NumberVector<?>) mbr2, mbr1);
}
final int dim = dimensionality(mbr1, mbr2);
double agg = 0.;
for (int d = 0; d < dim; d++) {
final double diff;
final double d1 = mbr2.getMin(d) - mbr1.getMax(d);
if (d1 > 0.) {
diff = d1;
} else {
final double d2 = mbr1.getMin(d) - mbr2.getMax(d);
if (d2 > 0.) {
diff = d2;
} else {
continue;
}
}
agg += diff * diff;
}
return agg;
}
@Override
public boolean isMetric() {
return false;
}
@Override
public String toString() {
return "SquaredEuclideanDistance";
}
@Override
public boolean equals(Object obj) {
if (obj == null) {
return false;
}
if (obj == this) {
return true;
}
return this.getClass().equals(obj.getClass());
}
/**
* Parameterization class.
*
* @author Erich Schubert
*
* @apiviz.exclude
*/
public static class Parameterizer extends AbstractParameterizer {
@Override
protected SquaredEuclideanDistanceFunction makeInstance() {
return SquaredEuclideanDistanceFunction.STATIC;
}
}
}
|