summaryrefslogtreecommitdiff
path: root/src/de/lmu/ifi/dbs/elki/distance/distancevalue/CorrelationDistance.java
blob: fc2888097ccc52604bd07c1dbe0f3835a1c63109 (plain)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
package de.lmu.ifi.dbs.elki.distance.distancevalue;

/*
 This file is part of ELKI:
 Environment for Developing KDD-Applications Supported by Index-Structures

 Copyright (C) 2013
 Ludwig-Maximilians-Universität München
 Lehr- und Forschungseinheit für Datenbanksysteme
 ELKI Development Team

 This program is free software: you can redistribute it and/or modify
 it under the terms of the GNU Affero General Public License as published by
 the Free Software Foundation, either version 3 of the License, or
 (at your option) any later version.

 This program is distributed in the hope that it will be useful,
 but WITHOUT ANY WARRANTY; without even the implied warranty of
 MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
 GNU Affero General Public License for more details.

 You should have received a copy of the GNU Affero General Public License
 along with this program.  If not, see <http://www.gnu.org/licenses/>.
 */

import java.io.IOException;
import java.io.ObjectInput;
import java.io.ObjectOutput;
import java.util.regex.Pattern;

/**
 * The correlation distance is a special Distance that indicates the
 * dissimilarity between correlation connected objects. The correlation distance
 * between two points is a pair consisting of the correlation dimension of two
 * points and the euclidean distance between the two points.
 * 
 * @author Elke Achtert
 * @param <D> distance type
 */
public abstract class CorrelationDistance<D extends CorrelationDistance<D>> extends AbstractDistance<D> {
  /**
   * The component separator used by correlation distances.
   * 
   * Note: Do NOT use regular expression syntax characters!
   */
  public static final String SEPARATOR = "x";

  /**
   * The pattern used for correlation distances
   */
  public static final Pattern CORRELATION_DISTANCE_PATTERN = Pattern.compile("\\d+" + Pattern.quote(SEPARATOR) + "\\d+(\\.\\d+)?([eE][-]?\\d+)?");

  /**
   * Generated SerialVersionUID.
   */
  private static final long serialVersionUID = 2829135841596857929L;

  /**
   * The correlation dimension.
   */
  protected int correlationValue;

  /**
   * The euclidean distance.
   */
  protected double euclideanValue;

  /**
   * Empty constructor for serialization purposes.
   */
  public CorrelationDistance() {
    // for serialization
  }

  /**
   * Constructs a new CorrelationDistance object consisting of the specified
   * correlation value and euclidean value.
   * 
   * @param correlationValue the correlation dimension to be represented by the
   *        CorrelationDistance
   * @param euclideanValue the euclidean distance to be represented by the
   *        CorrelationDistance
   */
  public CorrelationDistance(int correlationValue, double euclideanValue) {
    this.correlationValue = correlationValue;
    this.euclideanValue = euclideanValue;
  }

  /**
   * Returns a string representation of this CorrelationDistance.
   * 
   * @return the correlation value and the euclidean value separated by blank
   */
  @Override
  public String toString() {
    return Integer.toString(correlationValue) + SEPARATOR + Double.toString(euclideanValue);
  }

  /**
   * Compares this CorrelationDistance with the given CorrelationDistance wrt
   * the represented correlation values. If both values are considered to be
   * equal, the euclidean values are compared. Subclasses may need to overwrite
   * this method if necessary.
   * 
   * @return the value of {@link Integer#compareTo(Integer)}
   *         this.correlationValue.compareTo(other.correlationValue)} if it is a
   *         non zero value, the value of {@link Double#compare(double,double)
   *         Double.compare(this.euclideanValue, other.euclideanValue)}
   *         otherwise
   */
  @Override
  public int compareTo(D other) {
    int compare = (this.correlationValue < other.getCorrelationValue()) ? -1 : (this.correlationValue > other.getCorrelationValue()) ? +1 : 0;
    if (compare != 0) {
      return compare;
    } else {
      return Double.compare(this.euclideanValue, other.getEuclideanValue());
    }
  }

  @Override
  public int hashCode() {
    int result;
    long temp;
    result = correlationValue;
    temp = euclideanValue >= Double.MIN_NORMAL ? Double.doubleToLongBits(euclideanValue) : 0L;
    result = 29 * result + (int) (temp ^ (temp >>> 32));
    return result;
  }

  @SuppressWarnings("unchecked")
  @Override
  public boolean equals(Object obj) {
    if (obj == null) {
      return false;
    }
    if (getClass() != obj.getClass()) {
      return false;
    }
    final CorrelationDistance<D> other = (CorrelationDistance<D>) obj;
    if (this.correlationValue != other.correlationValue) {
      return false;
    }
    if (this.euclideanValue != other.euclideanValue) {
      return false;
    }
    return true;
  }

  /**
   * Returns the correlation dimension between the objects.
   * 
   * @return the correlation dimension
   */
  public int getCorrelationValue() {
    return correlationValue;
  }

  /**
   * Returns the euclidean distance between the objects.
   * 
   * @return the euclidean distance
   */
  public double getEuclideanValue() {
    return euclideanValue;
  }

  /**
   * Writes the correlation value and the euclidean value of this
   * CorrelationDistance to the specified stream.
   */
  @Override
  public void writeExternal(ObjectOutput out) throws IOException {
    out.writeInt(correlationValue);
    out.writeDouble(euclideanValue);
  }

  /**
   * Reads the correlation value and the euclidean value of this
   * CorrelationDistance from the specified stream.
   */
  @Override
  public void readExternal(ObjectInput in) throws IOException {
    correlationValue = in.readInt();
    euclideanValue = in.readDouble();
  }

  /**
   * Returns the number of Bytes this distance uses if it is written to an
   * external file.
   * 
   * @return 12 (4 Byte for an integer, 8 Byte for a double value)
   */
  @Override
  public int externalizableSize() {
    return 12;
  }
}