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path: root/examples/doc_builtinmodels_nistgauss2.py
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# <examples/doc_nistgauss2.py>
import matplotlib.pyplot as plt
import numpy as np

from lmfit.models import ExponentialModel, GaussianModel

dat = np.loadtxt('NIST_Gauss2.dat')
x = dat[:, 1]
y = dat[:, 0]

exp_mod = ExponentialModel(prefix='exp_')
gauss1 = GaussianModel(prefix='g1_')
gauss2 = GaussianModel(prefix='g2_')


def index_of(arrval, value):
    """Return index of array *at or below* value."""
    if value < min(arrval):
        return 0
    return max(np.where(arrval <= value)[0])


ix1 = index_of(x, 75)
ix2 = index_of(x, 135)
ix3 = index_of(x, 175)

pars1 = exp_mod.guess(y[:ix1], x=x[:ix1])
pars2 = gauss1.guess(y[ix1:ix2], x=x[ix1:ix2])
pars3 = gauss2.guess(y[ix2:ix3], x=x[ix2:ix3])

pars = pars1 + pars2 + pars3
mod = gauss1 + gauss2 + exp_mod

out = mod.fit(y, pars, x=x)

print(out.fit_report(min_correl=0.5))

plt.plot(x, y)
plt.plot(x, out.init_fit, '--', label='initial fit')
plt.plot(x, out.best_fit, '-', label='best fit')
plt.legend()
plt.show()
# <end examples/doc_nistgauss2.py>