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authorAaron M. Ucko <ucko@debian.org>2006-03-13 15:18:51 +0000
committerAaron M. Ucko <ucko@debian.org>2006-03-13 15:18:51 +0000
commit047f9550aeffa40eb05ad53427718889f660e0f4 (patch)
treec491506658b86eb5b9b4145a178f7bf64fe4a543 /api/salsap.h
parent4b1edc60532e16ec7d0255e1c3552c2e6a33737e (diff)
Load /tmp/.../ncbi-tools6-6.1.20060301 into
branches/upstream/current.
Diffstat (limited to 'api/salsap.h')
-rw-r--r--api/salsap.h8
1 files changed, 7 insertions, 1 deletions
diff --git a/api/salsap.h b/api/salsap.h
index c48112f4..f06d8f0e 100644
--- a/api/salsap.h
+++ b/api/salsap.h
@@ -28,13 +28,18 @@
*
* Version Creation Date: 1/27/96
*
-* $Revision: 6.3 $
+* $Revision: 6.4 $
*
* File Description:
*
* Modifications:
* --------------------------------------------------------------------------
* $Log: salsap.h,v $
+* Revision 6.4 2006/01/10 22:27:06 bollin
+* added function SeqAlignInsertByLoc, to be used when nucleotides are inserted
+* into a sequence that is in an alignment. An extra segment, where all functions
+* except the one with the insertion are gapped, is created.
+*
* Revision 6.3 1999/11/24 21:24:28 vakatov
* Fixed for the C++ and/or MSVC DLL compilation
*
@@ -156,6 +161,7 @@ NLM_EXTERN SeqAlignPtr LIBCALL SeqAlignEndExtend (SeqAlignPtr sap, Int4 start1,
Int4 stop1, Int4 stop2, Int4 x1, Int4 y1, Int4 x2, Int4 y2,
Uint1 strand1, Uint1 strand2);
+NLM_EXTERN SeqAlignPtr LIBCALL SeqAlignInsertByLoc (SeqLocPtr slp, SeqAlignPtr salp);
/**Delete, Truncate**/
NLM_EXTERN SeqAlignPtr LIBCALL SeqAlignDeleteByLoc (SeqLocPtr slp, SeqAlignPtr salp);