diff options
Diffstat (limited to 'errmsg/valid.msg')
| -rw-r--r-- | errmsg/valid.msg | 21 |
1 files changed, 21 insertions, 0 deletions
diff --git a/errmsg/valid.msg b/errmsg/valid.msg index a7923795..bc138e16 100644 --- a/errmsg/valid.msg +++ b/errmsg/valid.msg @@ -159,6 +159,13 @@ $^ SeqLitGapLength0, 43 A SeqLit component of a delta Bioseq can specify a gap, but it should not be a gap of 0 length. +$^ TpaAssmeblyProblem, 44 +Third party annotation records should have a TpaAssembly user object and a +Seq-hist.assembly alignment for the PRIMARY block. + +$^ SeqLocLength, 45 +A SeqLoc component of a delta Bioseq is suspiciously small. + $$ SEQ_DESCR, 2 $^ BioSourceMissing, 1 @@ -334,6 +341,9 @@ A feature location should refer to the accession or gi number, not a local or ge $^ ArchaicFeatureProduct, 14 A feature product should refer to the accession or gi number, not a local or general ID. +$^ GraphPackagingProblem, 15 +A graph should be packaged on its bioseq, or on a set containing the Bioseq. + $$ SEQ_FEAT, 5 $^ InvalidForType, 1 @@ -608,6 +618,17 @@ the inheritance by overlap. $^ UTRdoesNotAbutCDS, 66 The 5'UTR and 3'UTR features should exactly abut the CDS feature. +$^ BadConflictFlag, 67 +The coding region conflict flag is set, but the translated product is the +same as the instantiated product Bioseq. + +$^ ConflictFlagSet, 68 +The coding region conflict flag is appropriately set, but this record should +be brought to the attention of the source database for possible correction. + +$^ LocusTagProblem, 69 +A gene locus_tag should be a single token, with no spaces. + $$ SEQ_ALIGN, 6 $^ SeqIdProblem, 1 |