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|
#ifndef _objinsdseq_
#define _objinsdseq_
#undef NLM_EXTERN
#ifdef NLM_IMPORT
#define NLM_EXTERN NLM_IMPORT
#else
#define NLM_EXTERN extern
#endif
#ifdef __cplusplus
extern "C" { /* } */
#endif
/**************************************************
*
* Generated objects for Module INSD-INSDSeq
* Generated using ASNCODE Revision: 6.17 at May 26, 2010 12:38 PM
*
**************************************************/
NLM_EXTERN Boolean LIBCALL
objinsdseqAsnLoad PROTO((void));
/**************************************************
*
* INSDSet
*
**************************************************/
typedef struct struct_INSDSeq INSDSet;
typedef struct struct_INSDSeq PNTR INSDSetPtr;
#define INSDSetNew() INSDSeqNew()
#ifdef NLM_GENERATED_CODE_PROTO
NLM_EXTERN INSDSetPtr LIBCALL INSDSetFree PROTO ((INSDSetPtr ));
NLM_EXTERN INSDSetPtr LIBCALL INSDSetNew PROTO (( void ));
NLM_EXTERN INSDSetPtr LIBCALL INSDSetAsnRead PROTO (( AsnIoPtr, AsnTypePtr));
NLM_EXTERN Boolean LIBCALL INSDSetAsnWrite PROTO (( INSDSetPtr , AsnIoPtr, AsnTypePtr));
#endif /* NLM_GENERATED_CODE_PROTO */
/**************************************************
*
* INSDSeq
*
**************************************************/
typedef struct struct_INSDSeq {
struct struct_INSDSeq PNTR next;
Uint4 OBbits__;
CharPtr locus;
Int4 length;
CharPtr strandedness;
CharPtr moltype;
CharPtr topology;
CharPtr division;
CharPtr update_date;
CharPtr create_date;
CharPtr update_release;
CharPtr create_release;
CharPtr definition;
CharPtr primary_accession;
CharPtr entry_version;
CharPtr accession_version;
ValNodePtr other_seqids;
ValNodePtr secondary_accessions;
CharPtr project;
ValNodePtr keywords;
CharPtr segment;
CharPtr source;
CharPtr organism;
CharPtr taxonomy;
struct struct_INSDReference PNTR references;
CharPtr comment;
struct struct_INSDComment PNTR comment_set;
struct struct_INSDStrucComment PNTR struc_comments;
CharPtr primary;
CharPtr source_db;
CharPtr database_reference;
struct struct_INSDFeature PNTR feature_table;
struct struct_INSDFeatureSet PNTR feature_set;
CharPtr sequence;
CharPtr contig;
struct struct_INSDAltSeqData PNTR alt_seq;
} INSDSeq, PNTR INSDSeqPtr;
NLM_EXTERN INSDSeqPtr LIBCALL INSDSeqFree PROTO ((INSDSeqPtr ));
NLM_EXTERN INSDSeqPtr LIBCALL INSDSeqNew PROTO (( void ));
NLM_EXTERN INSDSeqPtr LIBCALL INSDSeqAsnRead PROTO (( AsnIoPtr, AsnTypePtr));
NLM_EXTERN Boolean LIBCALL INSDSeqAsnWrite PROTO (( INSDSeqPtr , AsnIoPtr, AsnTypePtr));
/**************************************************
*
* INSDReference
*
**************************************************/
typedef struct struct_INSDReference {
struct struct_INSDReference PNTR next;
Uint4 OBbits__;
CharPtr reference;
CharPtr position;
ValNodePtr authors;
CharPtr consortium;
CharPtr title;
CharPtr journal;
struct struct_INSDXref PNTR xref;
#define OB__INSDReference_pubmed 0
Int4 pubmed;
CharPtr remark;
} INSDReference, PNTR INSDReferencePtr;
NLM_EXTERN INSDReferencePtr LIBCALL INSDReferenceFree PROTO ((INSDReferencePtr ));
NLM_EXTERN INSDReferencePtr LIBCALL INSDReferenceNew PROTO (( void ));
NLM_EXTERN INSDReferencePtr LIBCALL INSDReferenceAsnRead PROTO (( AsnIoPtr, AsnTypePtr));
NLM_EXTERN Boolean LIBCALL INSDReferenceAsnWrite PROTO (( INSDReferencePtr , AsnIoPtr, AsnTypePtr));
/**************************************************
*
* INSDComment
*
**************************************************/
typedef struct struct_INSDComment {
struct struct_INSDComment PNTR next;
Uint4 OBbits__;
CharPtr type;
struct struct_INSDCommentParagraph PNTR paragraphs;
} INSDComment, PNTR INSDCommentPtr;
NLM_EXTERN INSDCommentPtr LIBCALL INSDCommentFree PROTO ((INSDCommentPtr ));
NLM_EXTERN INSDCommentPtr LIBCALL INSDCommentNew PROTO (( void ));
NLM_EXTERN INSDCommentPtr LIBCALL INSDCommentAsnRead PROTO (( AsnIoPtr, AsnTypePtr));
NLM_EXTERN Boolean LIBCALL INSDCommentAsnWrite PROTO (( INSDCommentPtr , AsnIoPtr, AsnTypePtr));
/**************************************************
*
* INSDStrucComment
*
**************************************************/
typedef struct struct_INSDStrucComment {
struct struct_INSDStrucComment PNTR next;
Uint4 OBbits__;
CharPtr name;
struct struct_INSDStrucCommentItem PNTR items;
} INSDStrucComment, PNTR INSDStrucCommentPtr;
NLM_EXTERN INSDStrucCommentPtr LIBCALL INSDStrucCommentFree PROTO ((INSDStrucCommentPtr ));
NLM_EXTERN INSDStrucCommentPtr LIBCALL INSDStrucCommentNew PROTO (( void ));
NLM_EXTERN INSDStrucCommentPtr LIBCALL INSDStrucCommentAsnRead PROTO (( AsnIoPtr, AsnTypePtr));
NLM_EXTERN Boolean LIBCALL INSDStrucCommentAsnWrite PROTO (( INSDStrucCommentPtr , AsnIoPtr, AsnTypePtr));
/**************************************************
*
* INSDFeature
*
**************************************************/
typedef struct struct_INSDFeature {
struct struct_INSDFeature PNTR next;
Uint4 OBbits__;
CharPtr key;
CharPtr location;
struct struct_INSDInterval PNTR intervals;
CharPtr operator__;
#define OB__INSDFeature_partial5 0
Uint1 partial5;
#define OB__INSDFeature_partial3 1
Uint1 partial3;
struct struct_INSDQualifier PNTR quals;
struct struct_INSDXref PNTR xrefs;
} INSDFeature, PNTR INSDFeaturePtr;
NLM_EXTERN INSDFeaturePtr LIBCALL INSDFeatureFree PROTO ((INSDFeaturePtr ));
NLM_EXTERN INSDFeaturePtr LIBCALL INSDFeatureNew PROTO (( void ));
NLM_EXTERN INSDFeaturePtr LIBCALL INSDFeatureAsnRead PROTO (( AsnIoPtr, AsnTypePtr));
NLM_EXTERN Boolean LIBCALL INSDFeatureAsnWrite PROTO (( INSDFeaturePtr , AsnIoPtr, AsnTypePtr));
/**************************************************
*
* INSDFeatureSet
*
**************************************************/
typedef struct struct_INSDFeatureSet {
struct struct_INSDFeatureSet PNTR next;
Uint4 OBbits__;
CharPtr annot_source;
struct struct_INSDFeature PNTR features;
} INSDFeatureSet, PNTR INSDFeatureSetPtr;
NLM_EXTERN INSDFeatureSetPtr LIBCALL INSDFeatureSetFree PROTO ((INSDFeatureSetPtr ));
NLM_EXTERN INSDFeatureSetPtr LIBCALL INSDFeatureSetNew PROTO (( void ));
NLM_EXTERN INSDFeatureSetPtr LIBCALL INSDFeatureSetAsnRead PROTO (( AsnIoPtr, AsnTypePtr));
NLM_EXTERN Boolean LIBCALL INSDFeatureSetAsnWrite PROTO (( INSDFeatureSetPtr , AsnIoPtr, AsnTypePtr));
/**************************************************
*
* INSDAltSeqData
*
**************************************************/
typedef struct struct_INSDAltSeqData {
struct struct_INSDAltSeqData PNTR next;
Uint4 OBbits__;
CharPtr name;
struct struct_INSDAltSeqItem PNTR items;
} INSDAltSeqData, PNTR INSDAltSeqDataPtr;
NLM_EXTERN INSDAltSeqDataPtr LIBCALL INSDAltSeqDataFree PROTO ((INSDAltSeqDataPtr ));
NLM_EXTERN INSDAltSeqDataPtr LIBCALL INSDAltSeqDataNew PROTO (( void ));
NLM_EXTERN INSDAltSeqDataPtr LIBCALL INSDAltSeqDataAsnRead PROTO (( AsnIoPtr, AsnTypePtr));
NLM_EXTERN Boolean LIBCALL INSDAltSeqDataAsnWrite PROTO (( INSDAltSeqDataPtr , AsnIoPtr, AsnTypePtr));
/**************************************************
*
* INSDXref
*
**************************************************/
typedef struct struct_INSDXref {
struct struct_INSDXref PNTR next;
Uint4 OBbits__;
CharPtr dbname;
CharPtr id;
} INSDXref, PNTR INSDXrefPtr;
NLM_EXTERN INSDXrefPtr LIBCALL INSDXrefFree PROTO ((INSDXrefPtr ));
NLM_EXTERN INSDXrefPtr LIBCALL INSDXrefNew PROTO (( void ));
NLM_EXTERN INSDXrefPtr LIBCALL INSDXrefAsnRead PROTO (( AsnIoPtr, AsnTypePtr));
NLM_EXTERN Boolean LIBCALL INSDXrefAsnWrite PROTO (( INSDXrefPtr , AsnIoPtr, AsnTypePtr));
/**************************************************
*
* INSDCommentParagraph
*
**************************************************/
typedef struct struct_INSDCommentParagraph {
struct struct_INSDCommentParagraph PNTR next;
Uint4 OBbits__;
struct struct_INSDCommentItem PNTR items;
} INSDCommentParagraph, PNTR INSDCommentParagraphPtr;
NLM_EXTERN INSDCommentParagraphPtr LIBCALL INSDCommentParagraphFree PROTO ((INSDCommentParagraphPtr ));
NLM_EXTERN INSDCommentParagraphPtr LIBCALL INSDCommentParagraphNew PROTO (( void ));
NLM_EXTERN INSDCommentParagraphPtr LIBCALL INSDCommentParagraphAsnRead PROTO (( AsnIoPtr, AsnTypePtr));
NLM_EXTERN Boolean LIBCALL INSDCommentParagraphAsnWrite PROTO (( INSDCommentParagraphPtr , AsnIoPtr, AsnTypePtr));
/**************************************************
*
* INSDCommentItem
*
**************************************************/
typedef struct struct_INSDCommentItem {
struct struct_INSDCommentItem PNTR next;
Uint4 OBbits__;
CharPtr value;
CharPtr url;
} INSDCommentItem, PNTR INSDCommentItemPtr;
NLM_EXTERN INSDCommentItemPtr LIBCALL INSDCommentItemFree PROTO ((INSDCommentItemPtr ));
NLM_EXTERN INSDCommentItemPtr LIBCALL INSDCommentItemNew PROTO (( void ));
NLM_EXTERN INSDCommentItemPtr LIBCALL INSDCommentItemAsnRead PROTO (( AsnIoPtr, AsnTypePtr));
NLM_EXTERN Boolean LIBCALL INSDCommentItemAsnWrite PROTO (( INSDCommentItemPtr , AsnIoPtr, AsnTypePtr));
/**************************************************
*
* INSDStrucCommentItem
*
**************************************************/
typedef struct struct_INSDStrucCommentItem {
struct struct_INSDStrucCommentItem PNTR next;
Uint4 OBbits__;
CharPtr tag;
CharPtr value;
CharPtr url;
} INSDStrucCommentItem, PNTR INSDStrucCommentItemPtr;
NLM_EXTERN INSDStrucCommentItemPtr LIBCALL INSDStrucCommentItemFree PROTO ((INSDStrucCommentItemPtr ));
NLM_EXTERN INSDStrucCommentItemPtr LIBCALL INSDStrucCommentItemNew PROTO (( void ));
NLM_EXTERN INSDStrucCommentItemPtr LIBCALL INSDStrucCommentItemAsnRead PROTO (( AsnIoPtr, AsnTypePtr));
NLM_EXTERN Boolean LIBCALL INSDStrucCommentItemAsnWrite PROTO (( INSDStrucCommentItemPtr , AsnIoPtr, AsnTypePtr));
/**************************************************
*
* INSDInterval
*
**************************************************/
typedef struct struct_INSDInterval {
struct struct_INSDInterval PNTR next;
Uint4 OBbits__;
#define OB__INSDInterval_from 0
Int4 from;
#define OB__INSDInterval_to 1
Int4 to;
#define OB__INSDInterval_point 2
Int4 point;
#define OB__INSDInterval_iscomp 3
Uint1 iscomp;
#define OB__INSDInterval_interbp 4
Uint1 interbp;
CharPtr accession;
} INSDInterval, PNTR INSDIntervalPtr;
NLM_EXTERN INSDIntervalPtr LIBCALL INSDIntervalFree PROTO ((INSDIntervalPtr ));
NLM_EXTERN INSDIntervalPtr LIBCALL INSDIntervalNew PROTO (( void ));
NLM_EXTERN INSDIntervalPtr LIBCALL INSDIntervalAsnRead PROTO (( AsnIoPtr, AsnTypePtr));
NLM_EXTERN Boolean LIBCALL INSDIntervalAsnWrite PROTO (( INSDIntervalPtr , AsnIoPtr, AsnTypePtr));
/**************************************************
*
* INSDQualifier
*
**************************************************/
typedef struct struct_INSDQualifier {
struct struct_INSDQualifier PNTR next;
Uint4 OBbits__;
CharPtr name;
CharPtr value;
} INSDQualifier, PNTR INSDQualifierPtr;
NLM_EXTERN INSDQualifierPtr LIBCALL INSDQualifierFree PROTO ((INSDQualifierPtr ));
NLM_EXTERN INSDQualifierPtr LIBCALL INSDQualifierNew PROTO (( void ));
NLM_EXTERN INSDQualifierPtr LIBCALL INSDQualifierAsnRead PROTO (( AsnIoPtr, AsnTypePtr));
NLM_EXTERN Boolean LIBCALL INSDQualifierAsnWrite PROTO (( INSDQualifierPtr , AsnIoPtr, AsnTypePtr));
/**************************************************
*
* INSDAltSeqItem
*
**************************************************/
typedef struct struct_INSDAltSeqItem {
struct struct_INSDAltSeqItem PNTR next;
Uint4 OBbits__;
struct struct_INSDInterval PNTR interval;
#define OB__INSDAltSeqItem_isgap 0
Uint1 isgap;
#define OB__INSDAltSeqItem_gap_length 1
Int4 gap_length;
CharPtr gap_type;
CharPtr gap_linkage;
CharPtr gap_comment;
CharPtr first_accn;
CharPtr last_accn;
CharPtr value;
} INSDAltSeqItem, PNTR INSDAltSeqItemPtr;
NLM_EXTERN INSDAltSeqItemPtr LIBCALL INSDAltSeqItemFree PROTO ((INSDAltSeqItemPtr ));
NLM_EXTERN INSDAltSeqItemPtr LIBCALL INSDAltSeqItemNew PROTO (( void ));
NLM_EXTERN INSDAltSeqItemPtr LIBCALL INSDAltSeqItemAsnRead PROTO (( AsnIoPtr, AsnTypePtr));
NLM_EXTERN Boolean LIBCALL INSDAltSeqItemAsnWrite PROTO (( INSDAltSeqItemPtr , AsnIoPtr, AsnTypePtr));
#ifdef __cplusplus
/* { */ }
#endif
#endif /* _objinsdseq_ */
#undef NLM_EXTERN
#ifdef NLM_EXPORT
#define NLM_EXTERN NLM_EXPORT
#else
#define NLM_EXTERN
#endif
|
