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Metadata-Version: 1.1
Name: silx
-Version: 0.5.0
+Version: 0.6.0
Summary: Software library for X-Ray data analysis
Home-page: https://github.com/silx-kit/silx
Author: data analysis unit
@@ -10,20 +10,30 @@ Description:
silx toolkit
============
- The silx project aims at providing a collection of Python packages to support the development of data assessment, reduction and analysis applications at synchrotron radiation facilities.
- It aims at providing reading/writing different file formats, data reduction routines and a set of Qt widgets to browse and visualize data.
+ The silx project aims at providing a collection of Python packages to support the
+ development of data assessment, reduction and analysis applications at synchrotron
+ radiation facilities.
+ It aims at providing reading/writing different file formats, data reduction routines
+ and a set of Qt widgets to browse and visualize data.
- The current version provides :
+ The current version provides:
- * reading `HDF5 <https://www.hdfgroup.org/HDF5/>`_ file format (with support of `SPEC <https://certif.com/spec.html>`_ file format)
+ * reading `HDF5 <https://www.hdfgroup.org/HDF5/>`_ file format (with support of
+ `SPEC <https://certif.com/spec.html>`_ file format and
+ `FabIO <http://www.silx.org/doc/fabio/dev/getting_started.html#list-of-file-formats-that-fabio-can-read-and-write>`_
+ images)
* histogramming
* fitting
- * 1D and 2D visualization using multiple backends (matplotlib or OpenGL)
- * image plot widget with a set of associated tools (See `changelog file <https://github.com/silx-kit/silx/blob/master/CHANGELOG.rst>`_).
- * Unified browser for HDF5, SPEC and image file formats supporting inspection and visualization of n-dimensional datasets.
- * Unified viewer (silx view filename) for HDF5, SPEC and image file formats
- * OpenGL-based widget to display 3D scalar field with isosurface and cutting plane.
+ * 1D and 2D visualization widgets using multiple backends (matplotlib or OpenGL)
+ * an OpenGL-based widget to display 3D scalar field with isosurface and cutting plane
+ * an image plot widget with a set of associated tools
+ * a unified browser for HDF5, SPEC and image file formats supporting inspection and
+ visualization of n-dimensional datasets.
+ * a unified viewer (*silx view filename*) for HDF5, SPEC and image file formats
+ * a unified converter to HDF5 format (*silx convert filename*)
+ * median filters on images (C and OpenCL implementations)
* image alignement (sift - OpenCL implementation)
+ * filtered backprojection and forward projection for tomography
Installation
------------
@@ -31,21 +41,36 @@ Description:
To install silx, run::
pip install silx
+
+ Or with Anaconda on Linux and MacOS::
+
+ conda install silx -c conda-forge
To install silx locally, run::
pip install silx --user
- On Linux, to install silx with pip, you must install numpy first. Unofficial packages for different distributions are available :
+ Unofficial packages for different distributions are available :
- Unofficial Debian8 packages are available at http://www.silx.org/pub/debian/
- CentOS 7 rpm packages are provided by Max IV at the following url: http://pubrepo.maxiv.lu.se/rpm/el7/x86_64/
- Fedora 23 rpm packages are provided by Max IV at http://pubrepo.maxiv.lu.se/rpm/fc23/x86_64/
- Arch Linux (AUR) packages are also available: https://aur.archlinux.org/packages/python-silx
- On Windows, pre-compiled binaries (aka Python wheels) are available for Python 2.7, 3.5 and 3.6.
+ Beside this, we provide a certain number of wheels (pre-compiled binary packages) to be installed
+ onto a pre-existing Python installation:
+
+ - On Windows, binary wheels are available for Python 2.7, 3.5 and 3.6.
+ - On MacOS, binary wheels are available for Python 2.7, 3.4, 3.5 and 3.6.
+ - On Linux, manylinux1 binary wheels are available for Python 2.7, 3.4, 3.5 and 3.6.
+
+ Those builds are made from "up-date" systems at the time of the release, i.e. they use
+ the latest stable version of numpy (and cython).
+ Hence your system should use a fairly recent version of numpy to be compatible with silx.
+ This can be achieved simply by::
+
+ pip install numpy --upgrade
- On Mac OS X, pre-compiled binaries (aka Python wheels) are available for Python 2.7.
The latest development version can be obtained from the git repository::
@@ -65,19 +90,28 @@ Description:
* `matplotlib <http://matplotlib.org/>`_ for the silx.gui.plot package
* `PyOpenGL <http://pyopengl.sourceforge.net/>`_ for the silx.gui.plot3d package
- Most modules and functions dealing with `HDF5 <https://www.hdfgroup.org/HDF5/>`_ input/output depend on the following extra package:
+ Most modules and functions dealing with `HDF5 <https://www.hdfgroup.org/HDF5/>`_ input/output depend on:
+
* `h5py <http://www.h5py.org/>`_
- * `ipython <https://ipython.org/>`_ and `qtconsole <https://pypi.python.org/pypi/qtconsole>`_ is required by silx.gui.console.py
+ Parallel algorithms depend on:
+
+ * `PyOpenCL <https://documen.tician.de/pyopencl/>`_
+
+ The console widgets depend on:
+
+ * `ipython <https://ipython.org/>`_
+ * `qtconsole <https://pypi.python.org/pypi/qtconsole>`_
+
Supported platforms: Linux, Windows, Mac OS X.
Documentation
-------------
- Documentation of releases is available at https://pythonhosted.org/silx/
+ Documentation of latest release is available at http://www.silx.org/doc/silx/latest/
- Latest documentation (nightly build) is available at http://www.silx.org/doc/silx/
+ Documentation of previous releases and nightly build is available at http://www.silx.org/doc/silx/
To build the documentation from the source (requires `Sphinx <http://www.sphinx-doc.org>`_), run::
@@ -101,21 +135,28 @@ Description:
Examples
--------
- Some examples are available in the source code repository. For example::
-
- python examples/{exampleName.py}
+ Some examples of sample code using silx are provided with the
+ `silx documentation <http://www.silx.org/doc/silx/dev/sample_code/index.html>`_.
License
-------
- The source code of silx is licensed under the MIT and LGPL licenses.
- See the `copyright file <https://github.com/silx-kit/silx/blob/master/copyright>`_ for details.
+ The source code of silx is licensed under the MIT license.
+ See the `LICENSE <https://github.com/silx-kit/silx/blob/master/LICENSE>`_ and `copyright <https://github.com/silx-kit/silx/blob/master/copyright>`_ files for details.
+
+ Citation
+ --------
+
+ silx releases can be cited by their DOI on Zenodo: |DOI:10.5281/zenodo.1000472|
.. |Travis Status| image:: https://travis-ci.org/silx-kit/silx.svg?branch=master
:target: https://travis-ci.org/silx-kit/silx
.. |Appveyor Status| image:: https://ci.appveyor.com/api/projects/status/qgox9ei0wxwfagrb/branch/master?svg=true
:target: https://ci.appveyor.com/project/ESRF/silx
+ .. |DOI:10.5281/zenodo.1000472| image:: https://zenodo.org/badge/DOI/10.5281/zenodo.1000472.svg
+ :target: https://doi.org/10.5281/zenodo.1000472
+
Platform: UNKNOWN
Classifier: Development Status :: 4 - Beta
@@ -126,7 +167,6 @@ Classifier: Environment :: X11 Applications :: Qt
Classifier: Intended Audience :: Education
Classifier: Intended Audience :: Science/Research
Classifier: License :: OSI Approved :: MIT License
-Classifier: License :: OSI Approved :: GNU Lesser General Public License v2 or later (LGPLv2+)
Classifier: Natural Language :: English
Classifier: Operating System :: MacOS
Classifier: Operating System :: Microsoft :: Windows
@@ -135,6 +175,7 @@ Classifier: Programming Language :: Cython
Classifier: Programming Language :: Python :: 2.7
Classifier: Programming Language :: Python :: 3.4
Classifier: Programming Language :: Python :: 3.5
+Classifier: Programming Language :: Python :: 3.6
Classifier: Programming Language :: Python :: Implementation :: CPython
Classifier: Topic :: Scientific/Engineering :: Physics
Classifier: Topic :: Software Development :: Libraries :: Python Modules