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-rw-r--r--silx/gui/plot/actions/PlotAction.py78
-rw-r--r--silx/gui/plot/actions/PlotToolAction.py150
-rw-r--r--silx/gui/plot/actions/__init__.py42
-rw-r--r--silx/gui/plot/actions/control.py604
-rw-r--r--silx/gui/plot/actions/fit.py186
-rw-r--r--silx/gui/plot/actions/histogram.py146
-rw-r--r--silx/gui/plot/actions/io.py743
-rw-r--r--silx/gui/plot/actions/medfilt.py147
-rw-r--r--silx/gui/plot/actions/mode.py104
9 files changed, 0 insertions, 2200 deletions
diff --git a/silx/gui/plot/actions/PlotAction.py b/silx/gui/plot/actions/PlotAction.py
deleted file mode 100644
index 2983775..0000000
--- a/silx/gui/plot/actions/PlotAction.py
+++ /dev/null
@@ -1,78 +0,0 @@
-# coding: utf-8
-# /*##########################################################################
-#
-# Copyright (c) 2004-2017 European Synchrotron Radiation Facility
-#
-# Permission is hereby granted, free of charge, to any person obtaining a copy
-# of this software and associated documentation files (the "Software"), to deal
-# in the Software without restriction, including without limitation the rights
-# to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
-# copies of the Software, and to permit persons to whom the Software is
-# furnished to do so, subject to the following conditions:
-#
-# The above copyright notice and this permission notice shall be included in
-# all copies or substantial portions of the Software.
-#
-# THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
-# IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
-# FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
-# AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
-# LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
-# OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN
-# THE SOFTWARE.
-#
-# ###########################################################################*/
-"""
-The class :class:`.PlotAction` help the creation of a qt.QAction associated
-with a :class:`.PlotWidget`.
-"""
-
-from __future__ import division
-
-
-__authors__ = ["V.A. Sole", "T. Vincent", "P. Knobel"]
-__license__ = "MIT"
-__date__ = "03/01/2018"
-
-
-import weakref
-from silx.gui import icons
-from silx.gui import qt
-
-
-class PlotAction(qt.QAction):
- """Base class for QAction that operates on a PlotWidget.
-
- :param plot: :class:`.PlotWidget` instance on which to operate.
- :param icon: QIcon or str name of icon to use
- :param str text: The name of this action to be used for menu label
- :param str tooltip: The text of the tooltip
- :param triggered: The callback to connect to the action's triggered
- signal or None for no callback.
- :param bool checkable: True for checkable action, False otherwise (default)
- :param parent: See :class:`QAction`.
- """
-
- def __init__(self, plot, icon, text, tooltip=None,
- triggered=None, checkable=False, parent=None):
- assert plot is not None
- self._plotRef = weakref.ref(plot)
-
- if not isinstance(icon, qt.QIcon):
- # Try with icon as a string and load corresponding icon
- icon = icons.getQIcon(icon)
-
- super(PlotAction, self).__init__(icon, text, parent)
-
- if tooltip is not None:
- self.setToolTip(tooltip)
-
- self.setCheckable(checkable)
-
- if triggered is not None:
- self.triggered[bool].connect(triggered)
-
- @property
- def plot(self):
- """The :class:`.PlotWidget` this action group is controlling."""
- return self._plotRef()
diff --git a/silx/gui/plot/actions/PlotToolAction.py b/silx/gui/plot/actions/PlotToolAction.py
deleted file mode 100644
index 77e8be2..0000000
--- a/silx/gui/plot/actions/PlotToolAction.py
+++ /dev/null
@@ -1,150 +0,0 @@
-# coding: utf-8
-# /*##########################################################################
-#
-# Copyright (c) 2004-2017 European Synchrotron Radiation Facility
-#
-# Permission is hereby granted, free of charge, to any person obtaining a copy
-# of this software and associated documentation files (the "Software"), to deal
-# in the Software without restriction, including without limitation the rights
-# to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
-# copies of the Software, and to permit persons to whom the Software is
-# furnished to do so, subject to the following conditions:
-#
-# The above copyright notice and this permission notice shall be included in
-# all copies or substantial portions of the Software.
-#
-# THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
-# IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
-# FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
-# AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
-# LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
-# OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN
-# THE SOFTWARE.
-#
-# ###########################################################################*/
-"""
-The class :class:`.PlotToolAction` help the creation of a qt.QAction associating
-a tool window with a :class:`.PlotWidget`.
-"""
-
-from __future__ import division
-
-
-__authors__ = ["V.A. Sole", "T. Vincent", "P. Knobel"]
-__license__ = "MIT"
-__date__ = "10/10/2018"
-
-
-import weakref
-
-from .PlotAction import PlotAction
-from silx.gui import qt
-
-
-class PlotToolAction(PlotAction):
- """Base class for QAction that maintain a tool window operating on a
- PlotWidget."""
-
- def __init__(self, plot, icon, text, tooltip=None,
- triggered=None, checkable=False, parent=None):
- PlotAction.__init__(self,
- plot=plot,
- icon=icon,
- text=text,
- tooltip=tooltip,
- triggered=self._triggered,
- parent=parent,
- checkable=True)
- self._previousGeometry = None
- self._toolWindow = None
-
- def _triggered(self, checked):
- """Update the plot of the histogram visibility status
-
- :param bool checked: status of the action button
- """
- self._setToolWindowVisible(checked)
-
- def _setToolWindowVisible(self, visible):
- """Set the tool window visible or hidden."""
- tool = self._getToolWindow()
- if tool.isVisible() == visible:
- # Nothing to do
- return
-
- if visible:
- self._connectPlot(tool)
- tool.show()
- if self._previousGeometry is not None:
- # Restore the geometry
- tool.setGeometry(self._previousGeometry)
- else:
- self._disconnectPlot(tool)
- # Save the geometry
- self._previousGeometry = tool.geometry()
- tool.hide()
-
- def _connectPlot(self, window):
- """Called if the tool is visible and have to be updated according to
- event of the plot.
-
- :param qt.QWidget window: The tool window
- """
- pass
-
- def _disconnectPlot(self, window):
- """Called if the tool is not visible and dont have anymore to be updated
- according to event of the plot.
-
- :param qt.QWidget window: The tool window
- """
- pass
-
- def _isWindowInUse(self):
- """Returns true if the tool window is currently in use."""
- if not self.isChecked():
- return False
- return self._toolWindow is not None
-
- def _ownerVisibilityChanged(self, isVisible):
- """Called when the visibility of the parent of the tool window changes
-
- :param bool isVisible: True if the parent became visible
- """
- if self._isWindowInUse():
- self._setToolWindowVisible(isVisible)
-
- def eventFilter(self, qobject, event):
- """Observe when the close event is emitted then
- simply uncheck the action button
-
- :param qobject: the object observe
- :param event: the event received by qobject
- """
- if event.type() == qt.QEvent.Close:
- if self._toolWindow is not None:
- window = self._toolWindow()
- self._previousGeometry = window.geometry()
- window.hide()
- self.setChecked(False)
-
- return PlotAction.eventFilter(self, qobject, event)
-
- def _getToolWindow(self):
- """Returns the window containg tohe tool.
-
- It uses lazy loading to create this tool..
- """
- if self._toolWindow is None:
- window = self._createToolWindow()
- if self._previousGeometry is not None:
- window.setGeometry(self._previousGeometry)
- window.installEventFilter(self)
- plot = self.plot
- plot.sigVisibilityChanged.connect(self._ownerVisibilityChanged)
- self._toolWindow = weakref.ref(window)
- return self._toolWindow()
-
- def _createToolWindow(self):
- """Create the tool window managing the plot."""
- raise NotImplementedError()
diff --git a/silx/gui/plot/actions/__init__.py b/silx/gui/plot/actions/__init__.py
deleted file mode 100644
index 930c728..0000000
--- a/silx/gui/plot/actions/__init__.py
+++ /dev/null
@@ -1,42 +0,0 @@
-# coding: utf-8
-# /*##########################################################################
-#
-# Copyright (c) 2017-2018 European Synchrotron Radiation Facility
-#
-# Permission is hereby granted, free of charge, to any person obtaining a copy
-# of this software and associated documentation files (the "Software"), to deal
-# in the Software without restriction, including without limitation the rights
-# to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
-# copies of the Software, and to permit persons to whom the Software is
-# furnished to do so, subject to the following conditions:
-#
-# The above copyright notice and this permission notice shall be included in
-# all copies or substantial portions of the Software.
-#
-# THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
-# IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
-# FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
-# AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
-# LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
-# OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN
-# THE SOFTWARE.
-#
-# ###########################################################################*/
-"""This package provides a set of QAction to use with
-:class:`~silx.gui.plot.PlotWidget`
-
-Those actions are useful to add menu items or toolbar items
-that interact with a :class:`~silx.gui.plot.PlotWidget`.
-
-It provides a base class used to define new plot actions:
-:class:`~silx.gui.plot.actions.PlotAction`.
-"""
-
-__authors__ = ["H. Payno"]
-__license__ = "MIT"
-__date__ = "16/08/2017"
-
-from .PlotAction import PlotAction
-from . import control
-from . import mode
-from . import io
diff --git a/silx/gui/plot/actions/control.py b/silx/gui/plot/actions/control.py
deleted file mode 100644
index 10df130..0000000
--- a/silx/gui/plot/actions/control.py
+++ /dev/null
@@ -1,604 +0,0 @@
-# coding: utf-8
-# /*##########################################################################
-#
-# Copyright (c) 2004-2018 European Synchrotron Radiation Facility
-#
-# Permission is hereby granted, free of charge, to any person obtaining a copy
-# of this software and associated documentation files (the "Software"), to deal
-# in the Software without restriction, including without limitation the rights
-# to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
-# copies of the Software, and to permit persons to whom the Software is
-# furnished to do so, subject to the following conditions:
-#
-# The above copyright notice and this permission notice shall be included in
-# all copies or substantial portions of the Software.
-#
-# THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
-# IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
-# FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
-# AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
-# LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
-# OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN
-# THE SOFTWARE.
-#
-# ###########################################################################*/
-"""
-:mod:`silx.gui.plot.actions.control` provides a set of QAction relative to control
-of a :class:`.PlotWidget`.
-
-The following QAction are available:
-
-- :class:`ColormapAction`
-- :class:`CrosshairAction`
-- :class:`CurveStyleAction`
-- :class:`GridAction`
-- :class:`KeepAspectRatioAction`
-- :class:`PanWithArrowKeysAction`
-- :class:`ResetZoomAction`
-- :class:`XAxisLogarithmicAction`
-- :class:`XAxisAutoScaleAction`
-- :class:`YAxisInvertedAction`
-- :class:`YAxisLogarithmicAction`
-- :class:`YAxisAutoScaleAction`
-- :class:`ZoomBackAction`
-- :class:`ZoomInAction`
-- :class:`ZoomOutAction`
-- :class:'ShowAxisAction'
-"""
-
-from __future__ import division
-
-__authors__ = ["V.A. Sole", "T. Vincent", "P. Knobel"]
-__license__ = "MIT"
-__date__ = "24/04/2018"
-
-from . import PlotAction
-import logging
-from silx.gui.plot import items
-from silx.gui.plot._utils import applyZoomToPlot as _applyZoomToPlot
-from silx.gui import qt
-from silx.gui import icons
-
-_logger = logging.getLogger(__name__)
-
-
-class ResetZoomAction(PlotAction):
- """QAction controlling reset zoom on a :class:`.PlotWidget`.
-
- :param plot: :class:`.PlotWidget` instance on which to operate
- :param parent: See :class:`QAction`
- """
-
- def __init__(self, plot, parent=None):
- super(ResetZoomAction, self).__init__(
- plot, icon='zoom-original', text='Reset Zoom',
- tooltip='Auto-scale the graph',
- triggered=self._actionTriggered,
- checkable=False, parent=parent)
- self._autoscaleChanged(True)
- plot.getXAxis().sigAutoScaleChanged.connect(self._autoscaleChanged)
- plot.getYAxis().sigAutoScaleChanged.connect(self._autoscaleChanged)
-
- def _autoscaleChanged(self, enabled):
- xAxis = self.plot.getXAxis()
- yAxis = self.plot.getYAxis()
- self.setEnabled(xAxis.isAutoScale() or yAxis.isAutoScale())
-
- if xAxis.isAutoScale() and yAxis.isAutoScale():
- tooltip = 'Auto-scale the graph'
- elif xAxis.isAutoScale(): # And not Y axis
- tooltip = 'Auto-scale the x-axis of the graph only'
- elif yAxis.isAutoScale(): # And not X axis
- tooltip = 'Auto-scale the y-axis of the graph only'
- else: # no axis in autoscale
- tooltip = 'Auto-scale the graph'
- self.setToolTip(tooltip)
-
- def _actionTriggered(self, checked=False):
- self.plot.resetZoom()
-
-
-class ZoomBackAction(PlotAction):
- """QAction performing a zoom-back in :class:`.PlotWidget` limits history.
-
- :param plot: :class:`.PlotWidget` instance on which to operate
- :param parent: See :class:`QAction`
- """
-
- def __init__(self, plot, parent=None):
- super(ZoomBackAction, self).__init__(
- plot, icon='zoom-back', text='Zoom Back',
- tooltip='Zoom back the plot',
- triggered=self._actionTriggered,
- checkable=False, parent=parent)
- self.setShortcutContext(qt.Qt.WidgetShortcut)
-
- def _actionTriggered(self, checked=False):
- self.plot.getLimitsHistory().pop()
-
-
-class ZoomInAction(PlotAction):
- """QAction performing a zoom-in on a :class:`.PlotWidget`.
-
- :param plot: :class:`.PlotWidget` instance on which to operate
- :param parent: See :class:`QAction`
- """
-
- def __init__(self, plot, parent=None):
- super(ZoomInAction, self).__init__(
- plot, icon='zoom-in', text='Zoom In',
- tooltip='Zoom in the plot',
- triggered=self._actionTriggered,
- checkable=False, parent=parent)
- self.setShortcut(qt.QKeySequence.ZoomIn)
- self.setShortcutContext(qt.Qt.WidgetShortcut)
-
- def _actionTriggered(self, checked=False):
- _applyZoomToPlot(self.plot, 1.1)
-
-
-class ZoomOutAction(PlotAction):
- """QAction performing a zoom-out on a :class:`.PlotWidget`.
-
- :param plot: :class:`.PlotWidget` instance on which to operate
- :param parent: See :class:`QAction`
- """
-
- def __init__(self, plot, parent=None):
- super(ZoomOutAction, self).__init__(
- plot, icon='zoom-out', text='Zoom Out',
- tooltip='Zoom out the plot',
- triggered=self._actionTriggered,
- checkable=False, parent=parent)
- self.setShortcut(qt.QKeySequence.ZoomOut)
- self.setShortcutContext(qt.Qt.WidgetShortcut)
-
- def _actionTriggered(self, checked=False):
- _applyZoomToPlot(self.plot, 1. / 1.1)
-
-
-class XAxisAutoScaleAction(PlotAction):
- """QAction controlling X axis autoscale on a :class:`.PlotWidget`.
-
- :param plot: :class:`.PlotWidget` instance on which to operate
- :param parent: See :class:`QAction`
- """
-
- def __init__(self, plot, parent=None):
- super(XAxisAutoScaleAction, self).__init__(
- plot, icon='plot-xauto', text='X Autoscale',
- tooltip='Enable x-axis auto-scale when checked.\n'
- 'If unchecked, x-axis does not change when reseting zoom.',
- triggered=self._actionTriggered,
- checkable=True, parent=parent)
- self.setChecked(plot.getXAxis().isAutoScale())
- plot.getXAxis().sigAutoScaleChanged.connect(self.setChecked)
-
- def _actionTriggered(self, checked=False):
- self.plot.getXAxis().setAutoScale(checked)
- if checked:
- self.plot.resetZoom()
-
-
-class YAxisAutoScaleAction(PlotAction):
- """QAction controlling Y axis autoscale on a :class:`.PlotWidget`.
-
- :param plot: :class:`.PlotWidget` instance on which to operate
- :param parent: See :class:`QAction`
- """
-
- def __init__(self, plot, parent=None):
- super(YAxisAutoScaleAction, self).__init__(
- plot, icon='plot-yauto', text='Y Autoscale',
- tooltip='Enable y-axis auto-scale when checked.\n'
- 'If unchecked, y-axis does not change when reseting zoom.',
- triggered=self._actionTriggered,
- checkable=True, parent=parent)
- self.setChecked(plot.getYAxis().isAutoScale())
- plot.getYAxis().sigAutoScaleChanged.connect(self.setChecked)
-
- def _actionTriggered(self, checked=False):
- self.plot.getYAxis().setAutoScale(checked)
- if checked:
- self.plot.resetZoom()
-
-
-class XAxisLogarithmicAction(PlotAction):
- """QAction controlling X axis log scale on a :class:`.PlotWidget`.
-
- :param plot: :class:`.PlotWidget` instance on which to operate
- :param parent: See :class:`QAction`
- """
-
- def __init__(self, plot, parent=None):
- super(XAxisLogarithmicAction, self).__init__(
- plot, icon='plot-xlog', text='X Log. scale',
- tooltip='Logarithmic x-axis when checked',
- triggered=self._actionTriggered,
- checkable=True, parent=parent)
- self.axis = plot.getXAxis()
- self.setChecked(self.axis.getScale() == self.axis.LOGARITHMIC)
- self.axis.sigScaleChanged.connect(self._setCheckedIfLogScale)
-
- def _setCheckedIfLogScale(self, scale):
- self.setChecked(scale == self.axis.LOGARITHMIC)
-
- def _actionTriggered(self, checked=False):
- scale = self.axis.LOGARITHMIC if checked else self.axis.LINEAR
- self.axis.setScale(scale)
-
-
-class YAxisLogarithmicAction(PlotAction):
- """QAction controlling Y axis log scale on a :class:`.PlotWidget`.
-
- :param plot: :class:`.PlotWidget` instance on which to operate
- :param parent: See :class:`QAction`
- """
-
- def __init__(self, plot, parent=None):
- super(YAxisLogarithmicAction, self).__init__(
- plot, icon='plot-ylog', text='Y Log. scale',
- tooltip='Logarithmic y-axis when checked',
- triggered=self._actionTriggered,
- checkable=True, parent=parent)
- self.axis = plot.getYAxis()
- self.setChecked(self.axis.getScale() == self.axis.LOGARITHMIC)
- self.axis.sigScaleChanged.connect(self._setCheckedIfLogScale)
-
- def _setCheckedIfLogScale(self, scale):
- self.setChecked(scale == self.axis.LOGARITHMIC)
-
- def _actionTriggered(self, checked=False):
- scale = self.axis.LOGARITHMIC if checked else self.axis.LINEAR
- self.axis.setScale(scale)
-
-
-class GridAction(PlotAction):
- """QAction controlling grid mode on a :class:`.PlotWidget`.
-
- :param plot: :class:`.PlotWidget` instance on which to operate
- :param str gridMode: The grid mode to use in 'both', 'major'.
- See :meth:`.PlotWidget.setGraphGrid`
- :param parent: See :class:`QAction`
- """
-
- def __init__(self, plot, gridMode='both', parent=None):
- assert gridMode in ('both', 'major')
- self._gridMode = gridMode
-
- super(GridAction, self).__init__(
- plot, icon='plot-grid', text='Grid',
- tooltip='Toggle grid (on/off)',
- triggered=self._actionTriggered,
- checkable=True, parent=parent)
- self.setChecked(plot.getGraphGrid() is not None)
- plot.sigSetGraphGrid.connect(self._gridChanged)
-
- def _gridChanged(self, which):
- """Slot listening for PlotWidget grid mode change."""
- self.setChecked(which != 'None')
-
- def _actionTriggered(self, checked=False):
- self.plot.setGraphGrid(self._gridMode if checked else None)
-
-
-class CurveStyleAction(PlotAction):
- """QAction controlling curve style on a :class:`.PlotWidget`.
-
- It changes the default line and markers style which updates all
- curves on the plot.
-
- :param plot: :class:`.PlotWidget` instance on which to operate
- :param parent: See :class:`QAction`
- """
-
- def __init__(self, plot, parent=None):
- super(CurveStyleAction, self).__init__(
- plot, icon='plot-toggle-points', text='Curve style',
- tooltip='Change curve line and markers style',
- triggered=self._actionTriggered,
- checkable=False, parent=parent)
-
- def _actionTriggered(self, checked=False):
- currentState = (self.plot.isDefaultPlotLines(),
- self.plot.isDefaultPlotPoints())
-
- # line only, line and symbol, symbol only
- states = (True, False), (True, True), (False, True)
- newState = states[(states.index(currentState) + 1) % 3]
-
- self.plot.setDefaultPlotLines(newState[0])
- self.plot.setDefaultPlotPoints(newState[1])
-
-
-class ColormapAction(PlotAction):
- """QAction opening a ColormapDialog to update the colormap.
-
- Both the active image colormap and the default colormap are updated.
-
- :param plot: :class:`.PlotWidget` instance on which to operate
- :param parent: See :class:`QAction`
- """
- def __init__(self, plot, parent=None):
- self._dialog = None # To store an instance of ColormapDialog
- super(ColormapAction, self).__init__(
- plot, icon='colormap', text='Colormap',
- tooltip="Change colormap",
- triggered=self._actionTriggered,
- checkable=True, parent=parent)
- self.plot.sigActiveImageChanged.connect(self._updateColormap)
- self.plot.sigActiveScatterChanged.connect(self._updateColormap)
-
- def setColorDialog(self, colorDialog):
- """Set a specific color dialog instead of using the default dialog."""
- assert(colorDialog is not None)
- assert(self._dialog is None)
- self._dialog = colorDialog
- self._dialog.visibleChanged.connect(self._dialogVisibleChanged)
- self.setChecked(self._dialog.isVisible())
-
- @staticmethod
- def _createDialog(parent):
- """Create the dialog if not already existing
-
- :parent QWidget parent: Parent of the new colormap
- :rtype: ColormapDialog
- """
- from silx.gui.dialog.ColormapDialog import ColormapDialog
- dialog = ColormapDialog(parent=parent)
- dialog.setModal(False)
- return dialog
-
- def _actionTriggered(self, checked=False):
- """Create a cmap dialog and update active image and default cmap."""
- if self._dialog is None:
- self._dialog = self._createDialog(self.plot)
- self._dialog.visibleChanged.connect(self._dialogVisibleChanged)
-
- # Run the dialog listening to colormap change
- if checked is True:
- self._dialog.show()
- self._updateColormap()
- else:
- self._dialog.hide()
-
- def _dialogVisibleChanged(self, isVisible):
- self.setChecked(isVisible)
-
- def _updateColormap(self):
- if self._dialog is None:
- return
- image = self.plot.getActiveImage()
-
- if isinstance(image, items.ImageComplexData):
- # Specific init for complex images
- colormap = image.getColormap()
-
- mode = image.getVisualizationMode()
- if mode in (items.ImageComplexData.Mode.AMPLITUDE_PHASE,
- items.ImageComplexData.Mode.LOG10_AMPLITUDE_PHASE):
- data = image.getData(
- copy=False, mode=items.ImageComplexData.Mode.PHASE)
- else:
- data = image.getData(copy=False)
-
- # Set histogram and range if any
- self._dialog.setData(data)
-
- elif isinstance(image, items.ColormapMixIn):
- # Set dialog from active image
- colormap = image.getColormap()
- data = image.getData(copy=False)
- # Set histogram and range if any
- self._dialog.setData(data)
-
- else:
- # No active image or active image is RGBA,
- # Check for active scatter plot
- scatter = self.plot._getActiveItem(kind='scatter')
- if scatter is not None:
- colormap = scatter.getColormap()
- data = scatter.getValueData(copy=False)
- self._dialog.setData(data)
-
- else:
- # No active data image nor scatter,
- # set dialog from default info
- colormap = self.plot.getDefaultColormap()
- # Reset histogram and range if any
- self._dialog.setData(None)
-
- self._dialog.setColormap(colormap)
-
-
-class ColorBarAction(PlotAction):
- """QAction opening the ColorBarWidget of the specified plot.
-
- :param plot: :class:`.PlotWidget` instance on which to operate
- :param parent: See :class:`QAction`
- """
- def __init__(self, plot, parent=None):
- self._dialog = None # To store an instance of ColorBar
- super(ColorBarAction, self).__init__(
- plot, icon='colorbar', text='Colorbar',
- tooltip="Show/Hide the colorbar",
- triggered=self._actionTriggered,
- checkable=True, parent=parent)
- colorBarWidget = self.plot.getColorBarWidget()
- old = self.blockSignals(True)
- self.setChecked(colorBarWidget.isVisibleTo(self.plot))
- self.blockSignals(old)
- colorBarWidget.sigVisibleChanged.connect(self._widgetVisibleChanged)
-
- def _widgetVisibleChanged(self, isVisible):
- """Callback when the colorbar `visible` property change."""
- if self.isChecked() == isVisible:
- return
- self.setChecked(isVisible)
-
- def _actionTriggered(self, checked=False):
- """Create a cmap dialog and update active image and default cmap."""
- colorBarWidget = self.plot.getColorBarWidget()
- if not colorBarWidget.isHidden() == checked:
- return
- self.plot.getColorBarWidget().setVisible(checked)
-
-
-class KeepAspectRatioAction(PlotAction):
- """QAction controlling aspect ratio on a :class:`.PlotWidget`.
-
- :param plot: :class:`.PlotWidget` instance on which to operate
- :param parent: See :class:`QAction`
- """
-
- def __init__(self, plot, parent=None):
- # Uses two images for checked/unchecked states
- self._states = {
- False: (icons.getQIcon('shape-circle-solid'),
- "Keep data aspect ratio"),
- True: (icons.getQIcon('shape-ellipse-solid'),
- "Do no keep data aspect ratio")
- }
-
- icon, tooltip = self._states[plot.isKeepDataAspectRatio()]
- super(KeepAspectRatioAction, self).__init__(
- plot,
- icon=icon,
- text='Toggle keep aspect ratio',
- tooltip=tooltip,
- triggered=self._actionTriggered,
- checkable=False,
- parent=parent)
- plot.sigSetKeepDataAspectRatio.connect(
- self._keepDataAspectRatioChanged)
-
- def _keepDataAspectRatioChanged(self, aspectRatio):
- """Handle Plot set keep aspect ratio signal"""
- icon, tooltip = self._states[aspectRatio]
- self.setIcon(icon)
- self.setToolTip(tooltip)
-
- def _actionTriggered(self, checked=False):
- # This will trigger _keepDataAspectRatioChanged
- self.plot.setKeepDataAspectRatio(not self.plot.isKeepDataAspectRatio())
-
-
-class YAxisInvertedAction(PlotAction):
- """QAction controlling Y orientation on a :class:`.PlotWidget`.
-
- :param plot: :class:`.PlotWidget` instance on which to operate
- :param parent: See :class:`QAction`
- """
-
- def __init__(self, plot, parent=None):
- # Uses two images for checked/unchecked states
- self._states = {
- False: (icons.getQIcon('plot-ydown'),
- "Orient Y axis downward"),
- True: (icons.getQIcon('plot-yup'),
- "Orient Y axis upward"),
- }
-
- icon, tooltip = self._states[plot.getYAxis().isInverted()]
- super(YAxisInvertedAction, self).__init__(
- plot,
- icon=icon,
- text='Invert Y Axis',
- tooltip=tooltip,
- triggered=self._actionTriggered,
- checkable=False,
- parent=parent)
- plot.getYAxis().sigInvertedChanged.connect(self._yAxisInvertedChanged)
-
- def _yAxisInvertedChanged(self, inverted):
- """Handle Plot set y axis inverted signal"""
- icon, tooltip = self._states[inverted]
- self.setIcon(icon)
- self.setToolTip(tooltip)
-
- def _actionTriggered(self, checked=False):
- # This will trigger _yAxisInvertedChanged
- yAxis = self.plot.getYAxis()
- yAxis.setInverted(not yAxis.isInverted())
-
-
-class CrosshairAction(PlotAction):
- """QAction toggling crosshair cursor on a :class:`.PlotWidget`.
-
- :param plot: :class:`.PlotWidget` instance on which to operate
- :param str color: Color to use to draw the crosshair
- :param int linewidth: Width of the crosshair cursor
- :param str linestyle: Style of line. See :meth:`.Plot.setGraphCursor`
- :param parent: See :class:`QAction`
- """
-
- def __init__(self, plot, color='black', linewidth=1, linestyle='-',
- parent=None):
- self.color = color
- """Color used to draw the crosshair (str)."""
-
- self.linewidth = linewidth
- """Width of the crosshair cursor (int)."""
-
- self.linestyle = linestyle
- """Style of line of the cursor (str)."""
-
- super(CrosshairAction, self).__init__(
- plot, icon='crosshair', text='Crosshair Cursor',
- tooltip='Enable crosshair cursor when checked',
- triggered=self._actionTriggered,
- checkable=True, parent=parent)
- self.setChecked(plot.getGraphCursor() is not None)
- plot.sigSetGraphCursor.connect(self.setChecked)
-
- def _actionTriggered(self, checked=False):
- self.plot.setGraphCursor(checked,
- color=self.color,
- linestyle=self.linestyle,
- linewidth=self.linewidth)
-
-
-class PanWithArrowKeysAction(PlotAction):
- """QAction toggling pan with arrow keys on a :class:`.PlotWidget`.
-
- :param plot: :class:`.PlotWidget` instance on which to operate
- :param parent: See :class:`QAction`
- """
-
- def __init__(self, plot, parent=None):
-
- super(PanWithArrowKeysAction, self).__init__(
- plot, icon='arrow-keys', text='Pan with arrow keys',
- tooltip='Enable pan with arrow keys when checked',
- triggered=self._actionTriggered,
- checkable=True, parent=parent)
- self.setChecked(plot.isPanWithArrowKeys())
- plot.sigSetPanWithArrowKeys.connect(self.setChecked)
-
- def _actionTriggered(self, checked=False):
- self.plot.setPanWithArrowKeys(checked)
-
-
-class ShowAxisAction(PlotAction):
- """QAction controlling axis visibility on a :class:`.PlotWidget`.
-
- :param plot: :class:`.PlotWidget` instance on which to operate
- :param parent: See :class:`QAction`
- """
-
- def __init__(self, plot, parent=None):
- tooltip = 'Show plot axis when checked, otherwise hide them'
- PlotAction.__init__(self,
- plot,
- icon='axis',
- text='show axis',
- tooltip=tooltip,
- triggered=self._actionTriggered,
- checkable=True,
- parent=parent)
- self.setChecked(self.plot._backend.isAxesDisplayed())
- plot._sigAxesVisibilityChanged.connect(self.setChecked)
-
- def _actionTriggered(self, checked=False):
- self.plot.setAxesDisplayed(checked)
-
diff --git a/silx/gui/plot/actions/fit.py b/silx/gui/plot/actions/fit.py
deleted file mode 100644
index cb70733..0000000
--- a/silx/gui/plot/actions/fit.py
+++ /dev/null
@@ -1,186 +0,0 @@
-# coding: utf-8
-# /*##########################################################################
-#
-# Copyright (c) 2004-2017 European Synchrotron Radiation Facility
-#
-# Permission is hereby granted, free of charge, to any person obtaining a copy
-# of this software and associated documentation files (the "Software"), to deal
-# in the Software without restriction, including without limitation the rights
-# to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
-# copies of the Software, and to permit persons to whom the Software is
-# furnished to do so, subject to the following conditions:
-#
-# The above copyright notice and this permission notice shall be included in
-# all copies or substantial portions of the Software.
-#
-# THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
-# IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
-# FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
-# AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
-# LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
-# OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN
-# THE SOFTWARE.
-#
-# ###########################################################################*/
-"""
-:mod:`silx.gui.plot.actions.fit` module provides actions relative to fit.
-
-The following QAction are available:
-
-- :class:`.FitAction`
-
-.. autoclass:`.FitAction`
-"""
-
-from __future__ import division
-
-__authors__ = ["V.A. Sole", "T. Vincent", "P. Knobel"]
-__license__ = "MIT"
-__date__ = "10/10/2018"
-
-from .PlotToolAction import PlotToolAction
-import logging
-from silx.gui import qt
-from silx.gui.plot.ItemsSelectionDialog import ItemsSelectionDialog
-from silx.gui.plot.items import Curve, Histogram
-
-_logger = logging.getLogger(__name__)
-
-
-def _getUniqueCurve(plt):
- """Get a single curve from the plot.
- Get the active curve if any, else if a single curve is plotted
- get it, else return None.
-
- :param plt: :class:`.PlotWidget` instance on which to operate
-
- :return: return value of plt.getActiveCurve(), or plt.getAllCurves()[0],
- or None
- """
- curve = plt.getActiveCurve()
- if curve is not None:
- return curve
-
- curves = plt.getAllCurves()
- if len(curves) == 0:
- return None
-
- if len(curves) == 1 and len(plt._getItems(kind='histogram')) == 0:
- return curves[0]
-
- return None
-
-
-def _getUniqueHistogram(plt):
- """Return the histogram if there is a single histogram and no curve in
- the plot. In all other cases, return None.
-
- :param plt: :class:`.PlotWidget` instance on which to operate
- :return: histogram or None
- """
- histograms = plt._getItems(kind='histogram')
- if len(histograms) != 1:
- return None
- if plt.getAllCurves(just_legend=True):
- return None
- return histograms[0]
-
-
-class FitAction(PlotToolAction):
- """QAction to open a :class:`FitWidget` and set its data to the
- active curve if any, or to the first curve.
-
- :param plot: :class:`.PlotWidget` instance on which to operate
- :param parent: See :class:`QAction`
- """
- def __init__(self, plot, parent=None):
- super(FitAction, self).__init__(
- plot, icon='math-fit', text='Fit curve',
- tooltip='Open a fit dialog',
- parent=parent)
- self.fit_widget = None
-
- def _createToolWindow(self):
- window = qt.QMainWindow(parent=self.plot)
- # import done here rather than at module level to avoid circular import
- # FitWidget -> BackgroundWidget -> PlotWindow -> actions -> fit -> FitWidget
- from ...fit.FitWidget import FitWidget
- fit_widget = FitWidget(parent=window)
- window.setCentralWidget(fit_widget)
- fit_widget.guibuttons.DismissButton.clicked.connect(window.close)
- fit_widget.sigFitWidgetSignal.connect(self.handle_signal)
- self.fit_widget = fit_widget
- return window
-
- def _connectPlot(self, window):
- # Wait for the next iteration, else the plot is not yet initialized
- # No curve available
- qt.QTimer.singleShot(10, lambda: self._initFit(window))
-
- def _initFit(self, window):
- plot = self.plot
- self.xlabel = plot.getXAxis().getLabel()
- self.ylabel = plot.getYAxis().getLabel()
- self.xmin, self.xmax = plot.getXAxis().getLimits()
-
- histo = _getUniqueHistogram(self.plot)
- curve = _getUniqueCurve(self.plot)
-
- if histo is None and curve is None:
- # ambiguous case, we need to ask which plot item to fit
- isd = ItemsSelectionDialog(parent=plot, plot=self.plot)
- isd.setWindowTitle("Select item to be fitted")
- isd.setItemsSelectionMode(qt.QTableWidget.SingleSelection)
- isd.setAvailableKinds(["curve", "histogram"])
- isd.selectAllKinds()
-
- result = isd.exec_()
- if result and len(isd.getSelectedItems()) == 1:
- item = isd.getSelectedItems()[0]
- else:
- return
- elif histo is not None:
- # presence of a unique histo and no curve
- item = histo
- elif curve is not None:
- # presence of a unique or active curve
- item = curve
-
- self.legend = item.getLegend()
-
- if isinstance(item, Histogram):
- bin_edges = item.getBinEdgesData(copy=False)
- # take the middle coordinate between adjacent bin edges
- self.x = (bin_edges[1:] + bin_edges[:-1]) / 2
- self.y = item.getValueData(copy=False)
- # else take the active curve, or else the unique curve
- elif isinstance(item, Curve):
- self.x = item.getXData(copy=False)
- self.y = item.getYData(copy=False)
-
- self.fit_widget.setData(self.x, self.y,
- xmin=self.xmin, xmax=self.xmax)
- window.setWindowTitle(
- "Fitting " + self.legend +
- " on x range %f-%f" % (self.xmin, self.xmax))
-
- def handle_signal(self, ddict):
- x_fit = self.x[self.xmin <= self.x]
- x_fit = x_fit[x_fit <= self.xmax]
- fit_legend = "Fit <%s>" % self.legend
- fit_curve = self.plot.getCurve(fit_legend)
-
- if ddict["event"] == "FitFinished":
- y_fit = self.fit_widget.fitmanager.gendata()
- if fit_curve is None:
- self.plot.addCurve(x_fit, y_fit,
- fit_legend,
- xlabel=self.xlabel, ylabel=self.ylabel,
- resetzoom=False)
- else:
- fit_curve.setData(x_fit, y_fit)
- fit_curve.setVisible(True)
-
- if ddict["event"] in ["FitStarted", "FitFailed"]:
- if fit_curve is not None:
- fit_curve.setVisible(False)
diff --git a/silx/gui/plot/actions/histogram.py b/silx/gui/plot/actions/histogram.py
deleted file mode 100644
index 9181f53..0000000
--- a/silx/gui/plot/actions/histogram.py
+++ /dev/null
@@ -1,146 +0,0 @@
-# coding: utf-8
-# /*##########################################################################
-#
-# Copyright (c) 2004-2017 European Synchrotron Radiation Facility
-#
-# Permission is hereby granted, free of charge, to any person obtaining a copy
-# of this software and associated documentation files (the "Software"), to deal
-# in the Software without restriction, including without limitation the rights
-# to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
-# copies of the Software, and to permit persons to whom the Software is
-# furnished to do so, subject to the following conditions:
-#
-# The above copyright notice and this permission notice shall be included in
-# all copies or substantial portions of the Software.
-#
-# THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
-# IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
-# FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
-# AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
-# LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
-# OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN
-# THE SOFTWARE.
-#
-# ###########################################################################*/
-"""
-:mod:`silx.gui.plot.actions.histogram` provides actions relative to histograms
-for :class:`.PlotWidget`.
-
-The following QAction are available:
-
-- :class:`PixelIntensitiesHistoAction`
-"""
-
-from __future__ import division
-
-__authors__ = ["V.A. Sole", "T. Vincent", "P. Knobel"]
-__date__ = "10/10/2018"
-__license__ = "MIT"
-
-from .PlotToolAction import PlotToolAction
-from silx.math.histogram import Histogramnd
-from silx.math.combo import min_max
-import numpy
-import logging
-from silx.gui import qt
-
-_logger = logging.getLogger(__name__)
-
-
-class PixelIntensitiesHistoAction(PlotToolAction):
- """QAction to plot the pixels intensities diagram
-
- :param plot: :class:`.PlotWidget` instance on which to operate
- :param parent: See :class:`QAction`
- """
-
- def __init__(self, plot, parent=None):
- PlotToolAction.__init__(self,
- plot,
- icon='pixel-intensities',
- text='pixels intensity',
- tooltip='Compute image intensity distribution',
- parent=parent)
- self._connectedToActiveImage = False
- self._histo = None
-
- def _connectPlot(self, window):
- if not self._connectedToActiveImage:
- self.plot.sigActiveImageChanged.connect(
- self._activeImageChanged)
- self._connectedToActiveImage = True
- self.computeIntensityDistribution()
- PlotToolAction._connectPlot(self, window)
-
- def _disconnectPlot(self, window):
- if self._connectedToActiveImage:
- self.plot.sigActiveImageChanged.disconnect(
- self._activeImageChanged)
- self._connectedToActiveImage = False
- PlotToolAction._disconnectPlot(self, window)
-
- def _activeImageChanged(self, previous, legend):
- """Handle active image change: toggle enabled toolbar, update curve"""
- if self._isWindowInUse():
- self.computeIntensityDistribution()
-
- def computeIntensityDistribution(self):
- """Get the active image and compute the image intensity distribution
- """
- activeImage = self.plot.getActiveImage()
-
- if activeImage is not None:
- image = activeImage.getData(copy=False)
- if image.ndim == 3: # RGB(A) images
- _logger.info('Converting current image from RGB(A) to grayscale\
- in order to compute the intensity distribution')
- image = (image[:, :, 0] * 0.299 +
- image[:, :, 1] * 0.587 +
- image[:, :, 2] * 0.114)
-
- xmin, xmax = min_max(image, min_positive=False, finite=True)
- nbins = min(1024, int(numpy.sqrt(image.size)))
- data_range = xmin, xmax
-
- # bad hack: get 256 bins in the case we have a B&W
- if numpy.issubdtype(image.dtype, numpy.integer):
- if nbins > xmax - xmin:
- nbins = xmax - xmin
-
- nbins = max(2, nbins)
-
- data = image.ravel().astype(numpy.float32)
- histogram = Histogramnd(data, n_bins=nbins, histo_range=data_range)
- assert len(histogram.edges) == 1
- self._histo = histogram.histo
- edges = histogram.edges[0]
- plot = self.getHistogramPlotWidget()
- plot.addHistogram(histogram=self._histo,
- edges=edges,
- legend='pixel intensity',
- fill=True,
- color='#66aad7')
- plot.resetZoom()
-
- def getHistogramPlotWidget(self):
- """Create the plot histogram if needed, otherwise create it
-
- :return: the PlotWidget showing the histogram of the pixel intensities
- """
- return self._getToolWindow()
-
- def _createToolWindow(self):
- from silx.gui.plot.PlotWindow import Plot1D
- window = Plot1D(parent=self.plot)
- window.setWindowFlags(qt.Qt.Window)
- window.setWindowTitle('Image Intensity Histogram')
- window.getXAxis().setLabel("Value")
- window.getYAxis().setLabel("Count")
- return window
-
- def getHistogram(self):
- """Return the last computed histogram
-
- :return: the histogram displayed in the HistogramPlotWiget
- """
- return self._histo
diff --git a/silx/gui/plot/actions/io.py b/silx/gui/plot/actions/io.py
deleted file mode 100644
index 97de527..0000000
--- a/silx/gui/plot/actions/io.py
+++ /dev/null
@@ -1,743 +0,0 @@
-# coding: utf-8
-# /*##########################################################################
-#
-# Copyright (c) 2004-2018 European Synchrotron Radiation Facility
-#
-# Permission is hereby granted, free of charge, to any person obtaining a copy
-# of this software and associated documentation files (the "Software"), to deal
-# in the Software without restriction, including without limitation the rights
-# to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
-# copies of the Software, and to permit persons to whom the Software is
-# furnished to do so, subject to the following conditions:
-#
-# The above copyright notice and this permission notice shall be included in
-# all copies or substantial portions of the Software.
-#
-# THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
-# IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
-# FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
-# AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
-# LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
-# OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN
-# THE SOFTWARE.
-#
-# ###########################################################################*/
-"""
-:mod:`silx.gui.plot.actions.io` provides a set of QAction relative of inputs
-and outputs for a :class:`.PlotWidget`.
-
-The following QAction are available:
-
-- :class:`CopyAction`
-- :class:`PrintAction`
-- :class:`SaveAction`
-"""
-
-from __future__ import division
-
-__authors__ = ["V.A. Sole", "T. Vincent", "P. Knobel"]
-__license__ = "MIT"
-__date__ = "12/07/2018"
-
-from . import PlotAction
-from silx.io.utils import save1D, savespec, NEXUS_HDF5_EXT
-from silx.io.nxdata import save_NXdata
-import logging
-import sys
-import os.path
-from collections import OrderedDict
-import traceback
-import numpy
-from silx.utils.deprecation import deprecated
-from silx.gui import qt, printer
-from silx.gui.dialog.GroupDialog import GroupDialog
-from silx.third_party.EdfFile import EdfFile
-from silx.third_party.TiffIO import TiffIO
-from ...utils.image import convertArrayToQImage
-if sys.version_info[0] == 3:
- from io import BytesIO
-else:
- import cStringIO as _StringIO
- BytesIO = _StringIO.StringIO
-
-_logger = logging.getLogger(__name__)
-
-_NEXUS_HDF5_EXT_STR = ' '.join(['*' + ext for ext in NEXUS_HDF5_EXT])
-
-
-def selectOutputGroup(h5filename):
- """Open a dialog to prompt the user to select a group in
- which to output data.
-
- :param str h5filename: name of an existing HDF5 file
- :rtype: str
- :return: Name of output group, or None if the dialog was cancelled
- """
- dialog = GroupDialog()
- dialog.addFile(h5filename)
- dialog.setWindowTitle("Select an output group")
- if not dialog.exec_():
- return None
- return dialog.getSelectedDataUrl().data_path()
-
-
-class SaveAction(PlotAction):
- """QAction for saving Plot content.
-
- It opens a Save as... dialog.
-
- :param plot: :class:`.PlotWidget` instance on which to operate.
- :param parent: See :class:`QAction`.
- """
-
- SNAPSHOT_FILTER_SVG = 'Plot Snapshot as SVG (*.svg)'
- SNAPSHOT_FILTER_PNG = 'Plot Snapshot as PNG (*.png)'
-
- DEFAULT_ALL_FILTERS = (SNAPSHOT_FILTER_PNG, SNAPSHOT_FILTER_SVG)
-
- # Dict of curve filters with CSV-like format
- # Using ordered dict to guarantee filters order
- # Note: '%.18e' is numpy.savetxt default format
- CURVE_FILTERS_TXT = OrderedDict((
- ('Curve as Raw ASCII (*.txt)',
- {'fmt': '%.18e', 'delimiter': ' ', 'header': False}),
- ('Curve as ";"-separated CSV (*.csv)',
- {'fmt': '%.18e', 'delimiter': ';', 'header': True}),
- ('Curve as ","-separated CSV (*.csv)',
- {'fmt': '%.18e', 'delimiter': ',', 'header': True}),
- ('Curve as tab-separated CSV (*.csv)',
- {'fmt': '%.18e', 'delimiter': '\t', 'header': True}),
- ('Curve as OMNIC CSV (*.csv)',
- {'fmt': '%.7E', 'delimiter': ',', 'header': False}),
- ('Curve as SpecFile (*.dat)',
- {'fmt': '%.10g', 'delimiter': '', 'header': False})
- ))
-
- CURVE_FILTER_NPY = 'Curve as NumPy binary file (*.npy)'
-
- CURVE_FILTER_NXDATA = 'Curve as NXdata (%s)' % _NEXUS_HDF5_EXT_STR
-
- DEFAULT_CURVE_FILTERS = list(CURVE_FILTERS_TXT.keys()) + [
- CURVE_FILTER_NPY, CURVE_FILTER_NXDATA]
-
- DEFAULT_ALL_CURVES_FILTERS = ("All curves as SpecFile (*.dat)",)
-
- IMAGE_FILTER_EDF = 'Image data as EDF (*.edf)'
- IMAGE_FILTER_TIFF = 'Image data as TIFF (*.tif)'
- IMAGE_FILTER_NUMPY = 'Image data as NumPy binary file (*.npy)'
- IMAGE_FILTER_ASCII = 'Image data as ASCII (*.dat)'
- IMAGE_FILTER_CSV_COMMA = 'Image data as ,-separated CSV (*.csv)'
- IMAGE_FILTER_CSV_SEMICOLON = 'Image data as ;-separated CSV (*.csv)'
- IMAGE_FILTER_CSV_TAB = 'Image data as tab-separated CSV (*.csv)'
- IMAGE_FILTER_RGB_PNG = 'Image as PNG (*.png)'
- IMAGE_FILTER_NXDATA = 'Image as NXdata (%s)' % _NEXUS_HDF5_EXT_STR
- DEFAULT_IMAGE_FILTERS = (IMAGE_FILTER_EDF,
- IMAGE_FILTER_TIFF,
- IMAGE_FILTER_NUMPY,
- IMAGE_FILTER_ASCII,
- IMAGE_FILTER_CSV_COMMA,
- IMAGE_FILTER_CSV_SEMICOLON,
- IMAGE_FILTER_CSV_TAB,
- IMAGE_FILTER_RGB_PNG,
- IMAGE_FILTER_NXDATA)
-
- SCATTER_FILTER_NXDATA = 'Scatter as NXdata (%s)' % _NEXUS_HDF5_EXT_STR
- DEFAULT_SCATTER_FILTERS = (SCATTER_FILTER_NXDATA,)
-
- # filters for which we don't want an "overwrite existing file" warning
- DEFAULT_APPEND_FILTERS = (CURVE_FILTER_NXDATA, IMAGE_FILTER_NXDATA,
- SCATTER_FILTER_NXDATA)
-
- def __init__(self, plot, parent=None):
- self._filters = {
- 'all': OrderedDict(),
- 'curve': OrderedDict(),
- 'curves': OrderedDict(),
- 'image': OrderedDict(),
- 'scatter': OrderedDict()}
-
- # Initialize filters
- for nameFilter in self.DEFAULT_ALL_FILTERS:
- self.setFileFilter(
- dataKind='all', nameFilter=nameFilter, func=self._saveSnapshot)
-
- for nameFilter in self.DEFAULT_CURVE_FILTERS:
- self.setFileFilter(
- dataKind='curve', nameFilter=nameFilter, func=self._saveCurve)
-
- for nameFilter in self.DEFAULT_ALL_CURVES_FILTERS:
- self.setFileFilter(
- dataKind='curves', nameFilter=nameFilter, func=self._saveCurves)
-
- for nameFilter in self.DEFAULT_IMAGE_FILTERS:
- self.setFileFilter(
- dataKind='image', nameFilter=nameFilter, func=self._saveImage)
-
- for nameFilter in self.DEFAULT_SCATTER_FILTERS:
- self.setFileFilter(
- dataKind='scatter', nameFilter=nameFilter, func=self._saveScatter)
-
- super(SaveAction, self).__init__(
- plot, icon='document-save', text='Save as...',
- tooltip='Save curve/image/plot snapshot dialog',
- triggered=self._actionTriggered,
- checkable=False, parent=parent)
- self.setShortcut(qt.QKeySequence.Save)
- self.setShortcutContext(qt.Qt.WidgetShortcut)
-
- def _errorMessage(self, informativeText=''):
- """Display an error message."""
- # TODO issue with QMessageBox size fixed and too small
- msg = qt.QMessageBox(self.plot)
- msg.setIcon(qt.QMessageBox.Critical)
- msg.setInformativeText(informativeText + ' ' + str(sys.exc_info()[1]))
- msg.setDetailedText(traceback.format_exc())
- msg.exec_()
-
- def _saveSnapshot(self, plot, filename, nameFilter):
- """Save a snapshot of the :class:`PlotWindow` widget.
-
- :param str filename: The name of the file to write
- :param str nameFilter: The selected name filter
- :return: False if format is not supported or save failed,
- True otherwise.
- """
- if nameFilter == self.SNAPSHOT_FILTER_PNG:
- fileFormat = 'png'
- elif nameFilter == self.SNAPSHOT_FILTER_SVG:
- fileFormat = 'svg'
- else: # Format not supported
- _logger.error(
- 'Saving plot snapshot failed: format not supported')
- return False
-
- plot.saveGraph(filename, fileFormat=fileFormat)
- return True
-
- def _getAxesLabels(self, item):
- # If curve has no associated label, get the default from the plot
- xlabel = item.getXLabel() or self.plot.getXAxis().getLabel()
- ylabel = item.getYLabel() or self.plot.getYAxis().getLabel()
- return xlabel, ylabel
-
- def _selectWriteableOutputGroup(self, filename):
- if os.path.exists(filename) and os.path.isfile(filename) \
- and os.access(filename, os.W_OK):
- entryPath = selectOutputGroup(filename)
- if entryPath is None:
- _logger.info("Save operation cancelled")
- return None
- return entryPath
- elif not os.path.exists(filename):
- # create new entry in new file
- return "/entry"
- else:
- self._errorMessage('Save failed (file access issue)\n')
- return None
-
- def _saveCurveAsNXdata(self, curve, filename):
- entryPath = self._selectWriteableOutputGroup(filename)
- if entryPath is None:
- return False
-
- xlabel, ylabel = self._getAxesLabels(curve)
-
- return save_NXdata(
- filename,
- nxentry_name=entryPath,
- signal=curve.getYData(copy=False),
- axes=[curve.getXData(copy=False)],
- signal_name="y",
- axes_names=["x"],
- signal_long_name=ylabel,
- axes_long_names=[xlabel],
- signal_errors=curve.getYErrorData(copy=False),
- axes_errors=[curve.getXErrorData(copy=True)],
- title=self.plot.getGraphTitle())
-
- def _saveCurve(self, plot, filename, nameFilter):
- """Save a curve from the plot.
-
- :param str filename: The name of the file to write
- :param str nameFilter: The selected name filter
- :return: False if format is not supported or save failed,
- True otherwise.
- """
- if nameFilter not in self.DEFAULT_CURVE_FILTERS:
- return False
-
- # Check if a curve is to be saved
- curve = plot.getActiveCurve()
- # before calling _saveCurve, if there is no selected curve, we
- # make sure there is only one curve on the graph
- if curve is None:
- curves = plot.getAllCurves()
- if not curves:
- self._errorMessage("No curve to be saved")
- return False
- curve = curves[0]
-
- if nameFilter in self.CURVE_FILTERS_TXT:
- filter_ = self.CURVE_FILTERS_TXT[nameFilter]
- fmt = filter_['fmt']
- csvdelim = filter_['delimiter']
- autoheader = filter_['header']
- else:
- # .npy or nxdata
- fmt, csvdelim, autoheader = ("", "", False)
-
- xlabel, ylabel = self._getAxesLabels(curve)
-
- if nameFilter == self.CURVE_FILTER_NXDATA:
- return self._saveCurveAsNXdata(curve, filename)
-
- try:
- save1D(filename,
- curve.getXData(copy=False),
- curve.getYData(copy=False),
- xlabel, [ylabel],
- fmt=fmt, csvdelim=csvdelim,
- autoheader=autoheader)
- except IOError:
- self._errorMessage('Save failed\n')
- return False
-
- return True
-
- def _saveCurves(self, plot, filename, nameFilter):
- """Save all curves from the plot.
-
- :param str filename: The name of the file to write
- :param str nameFilter: The selected name filter
- :return: False if format is not supported or save failed,
- True otherwise.
- """
- if nameFilter not in self.DEFAULT_ALL_CURVES_FILTERS:
- return False
-
- curves = plot.getAllCurves()
- if not curves:
- self._errorMessage("No curves to be saved")
- return False
-
- curve = curves[0]
- scanno = 1
- try:
- xlabel = curve.getXLabel() or plot.getGraphXLabel()
- ylabel = curve.getYLabel() or plot.getGraphYLabel(curve.getYAxis())
- specfile = savespec(filename,
- curve.getXData(copy=False),
- curve.getYData(copy=False),
- xlabel,
- ylabel,
- fmt="%.7g", scan_number=1, mode="w",
- write_file_header=True,
- close_file=False)
- except IOError:
- self._errorMessage('Save failed\n')
- return False
-
- for curve in curves[1:]:
- try:
- scanno += 1
- xlabel = curve.getXLabel() or plot.getGraphXLabel()
- ylabel = curve.getYLabel() or plot.getGraphYLabel(curve.getYAxis())
- specfile = savespec(specfile,
- curve.getXData(copy=False),
- curve.getYData(copy=False),
- xlabel,
- ylabel,
- fmt="%.7g", scan_number=scanno,
- write_file_header=False,
- close_file=False)
- except IOError:
- self._errorMessage('Save failed\n')
- return False
- specfile.close()
-
- return True
-
- def _saveImage(self, plot, filename, nameFilter):
- """Save an image from the plot.
-
- :param str filename: The name of the file to write
- :param str nameFilter: The selected name filter
- :return: False if format is not supported or save failed,
- True otherwise.
- """
- if nameFilter not in self.DEFAULT_IMAGE_FILTERS:
- return False
-
- image = plot.getActiveImage()
- if image is None:
- qt.QMessageBox.warning(
- plot, "No Data", "No image to be saved")
- return False
-
- data = image.getData(copy=False)
-
- # TODO Use silx.io for writing files
- if nameFilter == self.IMAGE_FILTER_EDF:
- edfFile = EdfFile(filename, access="w+")
- edfFile.WriteImage({}, data, Append=0)
- return True
-
- elif nameFilter == self.IMAGE_FILTER_TIFF:
- tiffFile = TiffIO(filename, mode='w')
- tiffFile.writeImage(data, software='silx')
- return True
-
- elif nameFilter == self.IMAGE_FILTER_NUMPY:
- try:
- numpy.save(filename, data)
- except IOError:
- self._errorMessage('Save failed\n')
- return False
- return True
-
- elif nameFilter == self.IMAGE_FILTER_NXDATA:
- entryPath = self._selectWriteableOutputGroup(filename)
- if entryPath is None:
- return False
- xorigin, yorigin = image.getOrigin()
- xscale, yscale = image.getScale()
- xaxis = xorigin + xscale * numpy.arange(data.shape[1])
- yaxis = yorigin + yscale * numpy.arange(data.shape[0])
- xlabel, ylabel = self._getAxesLabels(image)
- interpretation = "image" if len(data.shape) == 2 else "rgba-image"
-
- return save_NXdata(filename,
- nxentry_name=entryPath,
- signal=data,
- axes=[yaxis, xaxis],
- signal_name="image",
- axes_names=["y", "x"],
- axes_long_names=[ylabel, xlabel],
- title=plot.getGraphTitle(),
- interpretation=interpretation)
-
- elif nameFilter in (self.IMAGE_FILTER_ASCII,
- self.IMAGE_FILTER_CSV_COMMA,
- self.IMAGE_FILTER_CSV_SEMICOLON,
- self.IMAGE_FILTER_CSV_TAB):
- csvdelim, filetype = {
- self.IMAGE_FILTER_ASCII: (' ', 'txt'),
- self.IMAGE_FILTER_CSV_COMMA: (',', 'csv'),
- self.IMAGE_FILTER_CSV_SEMICOLON: (';', 'csv'),
- self.IMAGE_FILTER_CSV_TAB: ('\t', 'csv'),
- }[nameFilter]
-
- height, width = data.shape
- rows, cols = numpy.mgrid[0:height, 0:width]
- try:
- save1D(filename, rows.ravel(), (cols.ravel(), data.ravel()),
- filetype=filetype,
- xlabel='row',
- ylabels=['column', 'value'],
- csvdelim=csvdelim,
- autoheader=True)
-
- except IOError:
- self._errorMessage('Save failed\n')
- return False
- return True
-
- elif nameFilter == self.IMAGE_FILTER_RGB_PNG:
- # Get displayed image
- rgbaImage = image.getRgbaImageData(copy=False)
- # Convert RGB QImage
- qimage = convertArrayToQImage(rgbaImage[:, :, :3])
-
- if qimage.save(filename, 'PNG'):
- return True
- else:
- _logger.error('Failed to save image as %s', filename)
- qt.QMessageBox.critical(
- self.parent(),
- 'Save image as',
- 'Failed to save image')
-
- return False
-
- def _saveScatter(self, plot, filename, nameFilter):
- """Save an image from the plot.
-
- :param str filename: The name of the file to write
- :param str nameFilter: The selected name filter
- :return: False if format is not supported or save failed,
- True otherwise.
- """
- if nameFilter not in self.DEFAULT_SCATTER_FILTERS:
- return False
-
- if nameFilter == self.SCATTER_FILTER_NXDATA:
- entryPath = self._selectWriteableOutputGroup(filename)
- if entryPath is None:
- return False
- scatter = plot.getScatter()
-
- x = scatter.getXData(copy=False)
- y = scatter.getYData(copy=False)
- z = scatter.getValueData(copy=False)
-
- xerror = scatter.getXErrorData(copy=False)
- if isinstance(xerror, float):
- xerror = xerror * numpy.ones(x.shape, dtype=numpy.float32)
-
- yerror = scatter.getYErrorData(copy=False)
- if isinstance(yerror, float):
- yerror = yerror * numpy.ones(x.shape, dtype=numpy.float32)
-
- xlabel = plot.getGraphXLabel()
- ylabel = plot.getGraphYLabel()
-
- return save_NXdata(
- filename,
- nxentry_name=entryPath,
- signal=z,
- axes=[x, y],
- signal_name="values",
- axes_names=["x", "y"],
- axes_long_names=[xlabel, ylabel],
- axes_errors=[xerror, yerror],
- title=plot.getGraphTitle())
-
- def setFileFilter(self, dataKind, nameFilter, func):
- """Set a name filter to add/replace a file format support
-
- :param str dataKind:
- The kind of data for which the provided filter is valid.
- One of: 'all', 'curve', 'curves', 'image', 'scatter'
- :param str nameFilter: The name filter in the QFileDialog.
- See :meth:`QFileDialog.setNameFilters`.
- :param callable func: The function to call to perform saving.
- Expected signature is:
- bool func(PlotWidget plot, str filename, str nameFilter)
- """
- assert dataKind in ('all', 'curve', 'curves', 'image', 'scatter')
-
- self._filters[dataKind][nameFilter] = func
-
- def getFileFilters(self, dataKind):
- """Returns the nameFilter and associated function for a kind of data.
-
- :param str dataKind:
- The kind of data for which the provided filter is valid.
- On of: 'all', 'curve', 'curves', 'image', 'scatter'
- :return: {nameFilter: function} associations.
- :rtype: collections.OrderedDict
- """
- assert dataKind in ('all', 'curve', 'curves', 'image', 'scatter')
-
- return self._filters[dataKind].copy()
-
- def _actionTriggered(self, checked=False):
- """Handle save action."""
- # Set-up filters
- filters = OrderedDict()
-
- # Add image filters if there is an active image
- if self.plot.getActiveImage() is not None:
- filters.update(self._filters['image'].items())
-
- # Add curve filters if there is a curve to save
- if (self.plot.getActiveCurve() is not None or
- len(self.plot.getAllCurves()) == 1):
- filters.update(self._filters['curve'].items())
- if len(self.plot.getAllCurves()) >= 1:
- filters.update(self._filters['curves'].items())
-
- # Add scatter filters if there is a scatter
- # todo: CSV
- if self.plot.getScatter() is not None:
- filters.update(self._filters['scatter'].items())
-
- filters.update(self._filters['all'].items())
-
- # Create and run File dialog
- dialog = qt.QFileDialog(self.plot)
- dialog.setOption(dialog.DontUseNativeDialog)
- dialog.setWindowTitle("Output File Selection")
- dialog.setModal(1)
- dialog.setNameFilters(list(filters.keys()))
-
- dialog.setFileMode(dialog.AnyFile)
- dialog.setAcceptMode(dialog.AcceptSave)
-
- def onFilterSelection(filt_):
- # disable overwrite confirmation for NXdata types,
- # because we append the data to existing files
- if filt_ in self.DEFAULT_APPEND_FILTERS:
- dialog.setOption(dialog.DontConfirmOverwrite)
- else:
- dialog.setOption(dialog.DontConfirmOverwrite, False)
-
- dialog.filterSelected.connect(onFilterSelection)
-
- if not dialog.exec_():
- return False
-
- nameFilter = dialog.selectedNameFilter()
- filename = dialog.selectedFiles()[0]
- dialog.close()
-
- if '(' in nameFilter and ')' == nameFilter.strip()[-1]:
- # Check for correct file extension
- # Extract file extensions as .something
- extensions = [ext[ext.find('.'):] for ext in
- nameFilter[nameFilter.find('(')+1:-1].split()]
- for ext in extensions:
- if (len(filename) > len(ext) and
- filename[-len(ext):].lower() == ext.lower()):
- break
- else: # filename has no extension supported in nameFilter, add one
- if len(extensions) >= 1:
- filename += extensions[0]
-
- # Handle save
- func = filters.get(nameFilter, None)
- if func is not None:
- return func(self.plot, filename, nameFilter)
- else:
- _logger.error('Unsupported file filter: %s', nameFilter)
- return False
-
-
-def _plotAsPNG(plot):
- """Save a :class:`Plot` as PNG and return the payload.
-
- :param plot: The :class:`Plot` to save
- """
- pngFile = BytesIO()
- plot.saveGraph(pngFile, fileFormat='png')
- pngFile.flush()
- pngFile.seek(0)
- data = pngFile.read()
- pngFile.close()
- return data
-
-
-class PrintAction(PlotAction):
- """QAction for printing the plot.
-
- It opens a Print dialog.
-
- Current implementation print a bitmap of the plot area and not vector
- graphics, so printing quality is not great.
-
- :param plot: :class:`.PlotWidget` instance on which to operate.
- :param parent: See :class:`QAction`.
- """
-
- def __init__(self, plot, parent=None):
- super(PrintAction, self).__init__(
- plot, icon='document-print', text='Print...',
- tooltip='Open print dialog',
- triggered=self.printPlot,
- checkable=False, parent=parent)
- self.setShortcut(qt.QKeySequence.Print)
- self.setShortcutContext(qt.Qt.WidgetShortcut)
-
- def getPrinter(self):
- """The QPrinter instance used by the PrintAction.
-
- :rtype: QPrinter
- """
- return printer.getDefaultPrinter()
-
- @property
- @deprecated(replacement="getPrinter()", since_version="0.8.0")
- def printer(self):
- return self.getPrinter()
-
- def printPlotAsWidget(self):
- """Open the print dialog and print the plot.
-
- Use :meth:`QWidget.render` to print the plot
-
- :return: True if successful
- """
- dialog = qt.QPrintDialog(self.getPrinter(), self.plot)
- dialog.setWindowTitle('Print Plot')
- if not dialog.exec_():
- return False
-
- # Print a snapshot of the plot widget at the top of the page
- widget = self.plot.centralWidget()
-
- painter = qt.QPainter()
- if not painter.begin(self.getPrinter()):
- return False
-
- pageRect = self.getPrinter().pageRect()
- xScale = pageRect.width() / widget.width()
- yScale = pageRect.height() / widget.height()
- scale = min(xScale, yScale)
-
- painter.translate(pageRect.width() / 2., 0.)
- painter.scale(scale, scale)
- painter.translate(-widget.width() / 2., 0.)
- widget.render(painter)
- painter.end()
-
- return True
-
- def printPlot(self):
- """Open the print dialog and print the plot.
-
- Use :meth:`Plot.saveGraph` to print the plot.
-
- :return: True if successful
- """
- # Init printer and start printer dialog
- dialog = qt.QPrintDialog(self.getPrinter(), self.plot)
- dialog.setWindowTitle('Print Plot')
- if not dialog.exec_():
- return False
-
- # Save Plot as PNG and make a pixmap from it with default dpi
- pngData = _plotAsPNG(self.plot)
-
- pixmap = qt.QPixmap()
- pixmap.loadFromData(pngData, 'png')
-
- xScale = self.getPrinter().pageRect().width() / pixmap.width()
- yScale = self.getPrinter().pageRect().height() / pixmap.height()
- scale = min(xScale, yScale)
-
- # Draw pixmap with painter
- painter = qt.QPainter()
- if not painter.begin(self.getPrinter()):
- return False
-
- painter.drawPixmap(0, 0,
- pixmap.width() * scale,
- pixmap.height() * scale,
- pixmap)
- painter.end()
-
- return True
-
-
-class CopyAction(PlotAction):
- """QAction to copy :class:`.PlotWidget` content to clipboard.
-
- :param plot: :class:`.PlotWidget` instance on which to operate
- :param parent: See :class:`QAction`
- """
-
- def __init__(self, plot, parent=None):
- super(CopyAction, self).__init__(
- plot, icon='edit-copy', text='Copy plot',
- tooltip='Copy a snapshot of the plot into the clipboard',
- triggered=self.copyPlot,
- checkable=False, parent=parent)
- self.setShortcut(qt.QKeySequence.Copy)
- self.setShortcutContext(qt.Qt.WidgetShortcut)
-
- def copyPlot(self):
- """Copy plot content to the clipboard as a bitmap."""
- # Save Plot as PNG and make a QImage from it with default dpi
- pngData = _plotAsPNG(self.plot)
- image = qt.QImage.fromData(pngData, 'png')
- qt.QApplication.clipboard().setImage(image)
diff --git a/silx/gui/plot/actions/medfilt.py b/silx/gui/plot/actions/medfilt.py
deleted file mode 100644
index 276f970..0000000
--- a/silx/gui/plot/actions/medfilt.py
+++ /dev/null
@@ -1,147 +0,0 @@
-# coding: utf-8
-# /*##########################################################################
-#
-# Copyright (c) 2004-2018 European Synchrotron Radiation Facility
-#
-# Permission is hereby granted, free of charge, to any person obtaining a copy
-# of this software and associated documentation files (the "Software"), to deal
-# in the Software without restriction, including without limitation the rights
-# to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
-# copies of the Software, and to permit persons to whom the Software is
-# furnished to do so, subject to the following conditions:
-#
-# The above copyright notice and this permission notice shall be included in
-# all copies or substantial portions of the Software.
-#
-# THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
-# IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
-# FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
-# AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
-# LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
-# OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN
-# THE SOFTWARE.
-#
-# ###########################################################################*/
-"""
-:mod:`silx.gui.plot.actions.medfilt` provides a set of QAction to apply filter
-on data contained in a :class:`.PlotWidget`.
-
-The following QAction are available:
-
-- :class:`MedianFilterAction`
-- :class:`MedianFilter1DAction`
-- :class:`MedianFilter2DAction`
-
-"""
-
-from __future__ import division
-
-__authors__ = ["V.A. Sole", "T. Vincent", "P. Knobel"]
-__license__ = "MIT"
-
-__date__ = "10/10/2018"
-
-from .PlotToolAction import PlotToolAction
-from silx.gui.widgets.MedianFilterDialog import MedianFilterDialog
-from silx.math.medianfilter import medfilt2d
-import logging
-
-_logger = logging.getLogger(__name__)
-
-
-class MedianFilterAction(PlotToolAction):
- """QAction to plot the pixels intensities diagram
-
- :param plot: :class:`.PlotWidget` instance on which to operate
- :param parent: See :class:`QAction`
- """
-
- def __init__(self, plot, parent=None):
- PlotToolAction.__init__(self,
- plot,
- icon='median-filter',
- text='median filter',
- tooltip='Apply a median filter on the image',
- parent=parent)
- self._originalImage = None
- self._legend = None
- self._filteredImage = None
-
- def _createToolWindow(self):
- popup = MedianFilterDialog(parent=self.plot)
- popup.sigFilterOptChanged.connect(self._updateFilter)
- return popup
-
- def _connectPlot(self, window):
- PlotToolAction._connectPlot(self, window)
- self.plot.sigActiveImageChanged.connect(self._updateActiveImage)
- self._updateActiveImage()
-
- def _disconnectPlot(self, window):
- PlotToolAction._disconnectPlot(self, window)
- self.plot.sigActiveImageChanged.disconnect(self._updateActiveImage)
-
- def _updateActiveImage(self):
- """Set _activeImageLegend and _originalImage from the active image"""
- self._activeImageLegend = self.plot.getActiveImage(just_legend=True)
- if self._activeImageLegend is None:
- self._originalImage = None
- self._legend = None
- else:
- self._originalImage = self.plot.getImage(self._activeImageLegend).getData(copy=False)
- self._legend = self.plot.getImage(self._activeImageLegend).getLegend()
-
- def _updateFilter(self, kernelWidth, conditional=False):
- if self._originalImage is None:
- return
-
- self.plot.sigActiveImageChanged.disconnect(self._updateActiveImage)
- filteredImage = self._computeFilteredImage(kernelWidth, conditional)
- self.plot.addImage(data=filteredImage,
- legend=self._legend,
- replace=True)
- self.plot.sigActiveImageChanged.connect(self._updateActiveImage)
-
- def _computeFilteredImage(self, kernelWidth, conditional):
- raise NotImplementedError('MedianFilterAction is a an abstract class')
-
- def getFilteredImage(self):
- """
- :return: the image with the median filter apply on"""
- return self._filteredImage
-
-
-class MedianFilter1DAction(MedianFilterAction):
- """Define the MedianFilterAction for 1D
-
- :param plot: :class:`.PlotWidget` instance on which to operate
- :param parent: See :class:`QAction`
- """
- def __init__(self, plot, parent=None):
- MedianFilterAction.__init__(self,
- plot,
- parent=parent)
-
- def _computeFilteredImage(self, kernelWidth, conditional):
- assert(self.plot is not None)
- return medfilt2d(self._originalImage,
- (kernelWidth, 1),
- conditional)
-
-
-class MedianFilter2DAction(MedianFilterAction):
- """Define the MedianFilterAction for 2D
-
- :param plot: :class:`.PlotWidget` instance on which to operate
- :param parent: See :class:`QAction`
- """
- def __init__(self, plot, parent=None):
- MedianFilterAction.__init__(self,
- plot,
- parent=parent)
-
- def _computeFilteredImage(self, kernelWidth, conditional):
- assert(self.plot is not None)
- return medfilt2d(self._originalImage,
- (kernelWidth, kernelWidth),
- conditional)
diff --git a/silx/gui/plot/actions/mode.py b/silx/gui/plot/actions/mode.py
deleted file mode 100644
index ee05256..0000000
--- a/silx/gui/plot/actions/mode.py
+++ /dev/null
@@ -1,104 +0,0 @@
-# coding: utf-8
-# /*##########################################################################
-#
-# Copyright (c) 2004-2018 European Synchrotron Radiation Facility
-#
-# Permission is hereby granted, free of charge, to any person obtaining a copy
-# of this software and associated documentation files (the "Software"), to deal
-# in the Software without restriction, including without limitation the rights
-# to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
-# copies of the Software, and to permit persons to whom the Software is
-# furnished to do so, subject to the following conditions:
-#
-# The above copyright notice and this permission notice shall be included in
-# all copies or substantial portions of the Software.
-#
-# THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
-# IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
-# FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
-# AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
-# LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
-# OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN
-# THE SOFTWARE.
-#
-# ###########################################################################*/
-"""
-:mod:`silx.gui.plot.actions.mode` provides a set of QAction relative to mouse
-mode of a :class:`.PlotWidget`.
-
-The following QAction are available:
-
-- :class:`ZoomModeAction`
-- :class:`PanModeAction`
-"""
-
-from __future__ import division
-
-__authors__ = ["V. Valls"]
-__license__ = "MIT"
-__date__ = "16/08/2017"
-
-from . import PlotAction
-import logging
-
-_logger = logging.getLogger(__name__)
-
-
-class ZoomModeAction(PlotAction):
- """QAction controlling the zoom mode of a :class:`.PlotWidget`.
-
- :param plot: :class:`.PlotWidget` instance on which to operate
- :param parent: See :class:`QAction`
- """
-
- def __init__(self, plot, parent=None):
- super(ZoomModeAction, self).__init__(
- plot, icon='zoom', text='Zoom mode',
- tooltip='Zoom in or out',
- triggered=self._actionTriggered,
- checkable=True, parent=parent)
- # Listen to mode change
- self.plot.sigInteractiveModeChanged.connect(self._modeChanged)
- # Init the state
- self._modeChanged(None)
-
- def _modeChanged(self, source):
- modeDict = self.plot.getInteractiveMode()
- old = self.blockSignals(True)
- self.setChecked(modeDict["mode"] == "zoom")
- self.blockSignals(old)
-
- def _actionTriggered(self, checked=False):
- plot = self.plot
- if plot is not None:
- plot.setInteractiveMode('zoom', source=self)
-
-
-class PanModeAction(PlotAction):
- """QAction controlling the pan mode of a :class:`.PlotWidget`.
-
- :param plot: :class:`.PlotWidget` instance on which to operate
- :param parent: See :class:`QAction`
- """
-
- def __init__(self, plot, parent=None):
- super(PanModeAction, self).__init__(
- plot, icon='pan', text='Pan mode',
- tooltip='Pan the view',
- triggered=self._actionTriggered,
- checkable=True, parent=parent)
- # Listen to mode change
- self.plot.sigInteractiveModeChanged.connect(self._modeChanged)
- # Init the state
- self._modeChanged(None)
-
- def _modeChanged(self, source):
- modeDict = self.plot.getInteractiveMode()
- old = self.blockSignals(True)
- self.setChecked(modeDict["mode"] == "pan")
- self.blockSignals(old)
-
- def _actionTriggered(self, checked=False):
- plot = self.plot
- if plot is not None:
- plot.setInteractiveMode('pan', source=self)