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# makefile for flat2asn
#
# $Id: makeindx.unx,v 6.6 2008/01/25 19:56:25 ucko Exp $
#
# Sun with unbundled ANSI compiler [ make LCL=acc RAN=ranlib CC=acc ]
# Sun with Gnu C [ make LCL=gcc RAN=ranlib CC=gcc ]
# Sun with Solaris 2.x OS [ make LCL=sol CC="cc -Xa" ]
# Silicon Graphics [ make LCL=sgi OTHERLIBS="-lm -lPW -lsun" ]
# IBM 3090 with AIX [ make LCL=370 ]
# ULTRIX [ make LCL=ult RAN=ranlib ]
# Apple AUX [ make LCL=aux SHELL=\usr\bin ]
# NeXt [ make LCL=nxt CFLAGS1="-c -ansi" RAN=ranlib ]
# DEC Alpha under OSF/1 [ make LCL=alf CC=cc RAN=ranlib ]
# BeOS [ make OTHERLIBS="" ]
#
# see README for other supported systems
#
# Subsequent makes should make ... nocopy instead of make ... all
# to avoid recopying the include files
#
#
# NOTE: some make utilities (like SGI and IBM 3090) do not like a target
# which is undefined. This would be $(LIB4) if you are not making a
# vibrant version. Thus, this library target must be deleted on those
# systems. The section to be deleted is marked below with DELETE
#
# default flags for compiling and loading
include $(NCBI)/ncbi.mk
SUFFIXLCL = $(LCL)
CFLAGS1 = $(NCBI_CFLAGS1)
LDFLAGS1 = $(NCBI_LDFLAGS1)
CC = cc
RAN = ls -l
AR=ar
LIBPATH = -L$(NCBI_ALTLIB) -L$(NCBI_SYBASE)/lib
OTHERLIBS = $(LIBPATH) -lncbimla -lncbitax -lnetentr -lnetcli -lncbiobj -lncbi $(NCBI_SYBLIBS) $(NCBI_OTHERLIBS)
SUFFIXENV = unx
ASNDIR = asnstat
LIBPARSE = libindx.a
CFLAGS = $(CFLAGS1) -I../include -I$(NCBI_INCDIR)
LDFLAGS = $(LDFLAGS1) -I../include -I$(NCBI_INCDIR) -L$(NCBI_LIBDIR)
SRCCOPY = cp -p
##
## some things to make
##
# sources needed for indexing and parsing
SRC_I = indx_blk.c block.c entry.c gb_index.c em_index.c \
sp_index.c pr_index.c utilfun.c
SRC_P = add.c asci_blk.c citation.c flat2asn.c flatargs.c \
gb_ascii.c genref.c em_ascii.c ind.c loadfeat.c \
nucprot.c ref.c sp_global.c sp_ref.c sp_ascii.c\
taxcash.c utilfeat.c utilref.c
SRC_ALL = $(SRC_I) $(SRC_P)
# objects needed for indexing and parsing
OBJ_I = indx_blk.o block.o entry.o gb_index.o em_index.o \
sp_index.o pr_index.o utilfun.o
OBJ_P = add.o asci_blk.o citation.o flat2asn.o flatargs.o \
gb_ascii.o genref.o em_ascii.o ind.o loadfeat.o \
nucprot.o ref.o sp_global.o sp_ref.o sp_ascii.o\
taxcash.o utilfeat.o utilref.o
## All things to make
##
all : copy .WAIT nocopy flat2asn
nocopy : sources $(LIBPARSE)
sources : $(SRC_ALL)
## To clean out the directory without removing make
##
clean :
- rm -f *.[acho]
.NO_PARALLEL: copy
.WAIT:
echo Waiting...go
## Implicit actions
##
## get all the source files
##
$(SRC_ALL) : copy
copy :
- chmod -R ug+rw,o+r .
$(SRCCOPY) ../internal/parser/*.h ../include
$(SRCCOPY) ../internal/parser/*.c .
- chmod -R ug+rw,o+r .
## make libraries
##
$(LIBPARSE) : $(OBJ_I)
- rm -f $(LIBPARSE)
$(AR) cru $(LIBPARSE) $(OBJ_I)
$(SRCCOPY) $(LIBPARSE) ../lib
$(RAN) ../lib/$(LIBPARSE)
# flat2asn
flat2asn : flat2asn.o $(OBJ_P) $(LIBPARSE)
$(CC) -o flat2asn $(LDFLAGS) flat2asn.o $(OBJ_P) ../lib/$(LIBPARSE) $(OTHERLIBS)
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